View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5456_low_9 (Length: 242)

Name: NF5456_low_9
Description: NF5456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5456_low_9
NF5456_low_9
[»] chr6 (50 HSPs)
chr6 (10-242)||(15041225-15041457)
chr6 (20-242)||(19863202-19863424)
chr6 (20-242)||(22432474-22432696)
chr6 (10-242)||(16924554-16924786)
chr6 (20-242)||(25641858-25642080)
chr6 (10-242)||(16964985-16965217)
chr6 (10-178)||(31164586-31164754)
chr6 (24-242)||(22439028-22439246)
chr6 (10-242)||(16929269-16929497)
chr6 (20-242)||(21739697-21739919)
chr6 (20-164)||(19873344-19873488)
chr6 (89-242)||(18180780-18180933)
chr6 (20-161)||(22334647-22334788)
chr6 (20-231)||(18907330-18907542)
chr6 (20-242)||(16523078-16523300)
chr6 (40-242)||(21834565-21834767)
chr6 (89-179)||(17804474-17804564)
chr6 (89-179)||(27415681-27415771)
chr6 (90-179)||(12496586-12496675)
chr6 (90-179)||(18955502-18955591)
chr6 (89-160)||(22429788-22429859)
chr6 (90-179)||(1644983-1645072)
chr6 (90-179)||(12706966-12707055)
chr6 (90-179)||(20907720-20907809)
chr6 (91-179)||(9482032-9482120)
chr6 (90-162)||(16741484-16741556)
chr6 (91-179)||(23990200-23990288)
chr6 (93-179)||(21702568-21702654)
chr6 (90-179)||(19663046-19663135)
chr6 (98-179)||(19790518-19790599)
chr6 (90-179)||(22863224-22863313)
chr6 (91-179)||(8244140-8244228)
chr6 (91-179)||(11567142-11567230)
chr6 (90-162)||(14472548-14472620)
chr6 (91-179)||(23395348-23395436)
chr6 (83-242)||(22059418-22059577)
chr6 (122-241)||(22405741-22405860)
chr6 (91-149)||(19870870-19870928)
chr6 (91-149)||(25135441-25135499)
chr6 (90-179)||(5616553-5616642)
chr6 (20-161)||(15894185-15894326)
chr6 (90-147)||(23657191-23657248)
chr6 (114-179)||(25766907-25766972)
chr6 (91-179)||(1587470-1587558)
chr6 (91-179)||(12618583-12618671)
chr6 (91-179)||(18917005-18917093)
chr6 (98-154)||(22592568-22592624)
chr6 (91-179)||(27567348-27567436)
chr6 (101-154)||(20803317-20803370)
chr6 (90-139)||(27553386-27553435)
[»] chr7 (51 HSPs)
chr7 (20-242)||(18154511-18154733)
chr7 (20-242)||(24054691-24054913)
chr7 (19-242)||(19649159-19649382)
chr7 (20-242)||(9703489-9703711)
chr7 (20-242)||(11880475-11880697)
chr7 (20-242)||(12321417-12321639)
chr7 (20-242)||(17137738-17137960)
chr7 (20-242)||(12187236-12187458)
chr7 (83-242)||(10508757-10508916)
chr7 (20-242)||(14430101-14430323)
chr7 (83-242)||(2760413-2760572)
chr7 (90-162)||(18814-18886)
chr7 (91-179)||(13149433-13149521)
chr7 (89-179)||(12318404-12318494)
chr7 (89-162)||(48593212-48593285)
chr7 (89-179)||(11312925-11313015)
chr7 (89-179)||(11987489-11987579)
chr7 (89-179)||(13635208-13635298)
chr7 (89-179)||(15605011-15605101)
chr7 (90-179)||(26292673-26292762)
chr7 (91-179)||(12715144-12715232)
chr7 (90-179)||(6801490-6801579)
chr7 (89-162)||(9593622-9593695)
chr7 (89-162)||(9644585-9644658)
chr7 (98-179)||(18557257-18557338)
chr7 (91-179)||(12718948-12719036)
chr7 (91-179)||(12723859-12723947)
chr7 (90-162)||(16438790-16438862)
chr7 (91-179)||(16906939-16907027)
chr7 (91-179)||(18279683-18279771)
chr7 (91-179)||(18283646-18283734)
chr7 (128-242)||(15211759-15211873)
chr7 (90-154)||(8917704-8917768)
chr7 (91-179)||(15728603-15728691)
chr7 (91-179)||(16114521-16114609)
chr7 (91-179)||(16117674-16117762)
chr7 (89-179)||(11262605-11262695)
chr7 (89-179)||(11548006-11548096)
chr7 (89-179)||(11554602-11554692)
chr7 (93-179)||(16275772-16275858)
chr7 (90-179)||(14217192-14217281)
chr7 (89-146)||(15580968-15581025)
chr7 (98-146)||(9445930-9445978)
chr7 (99-179)||(12692782-12692862)
chr7 (90-154)||(13462039-13462103)
chr7 (99-179)||(14953484-14953564)
chr7 (176-242)||(3272166-3272232)
chr7 (95-149)||(35151888-35151942)
chr7 (90-179)||(25038949-25039038)
chr7 (99-179)||(14959450-14959530)
chr7 (98-146)||(20569368-20569416)
[»] chr1 (35 HSPs)
chr1 (20-242)||(21714772-21714994)
chr1 (20-242)||(42864886-42865108)
chr1 (21-242)||(22468371-22468592)
chr1 (27-242)||(21787717-21787932)
chr1 (20-242)||(22831053-22831275)
chr1 (20-242)||(6152077-6152299)
chr1 (20-242)||(21022860-21023082)
chr1 (27-242)||(18181796-18182011)
chr1 (88-232)||(3472611-3472755)
chr1 (20-161)||(20091229-20091370)
chr1 (90-242)||(8761308-8761460)
chr1 (103-242)||(22432458-22432597)
chr1 (93-179)||(20138364-20138450)
chr1 (89-179)||(36819047-36819137)
chr1 (89-162)||(16080200-16080273)
chr1 (89-179)||(17678326-17678416)
chr1 (89-179)||(21305591-21305681)
chr1 (89-179)||(33797810-33797900)
chr1 (90-162)||(12647147-12647219)
chr1 (91-179)||(20228548-20228636)
chr1 (90-179)||(18882645-18882734)
chr1 (90-179)||(46975745-46975834)
chr1 (91-179)||(16375196-16375284)
chr1 (91-179)||(21407635-21407723)
chr1 (93-149)||(21615718-21615774)
chr1 (91-179)||(52639821-52639909)
chr1 (83-146)||(22449037-22449100)
chr1 (89-179)||(19212144-19212234)
chr1 (90-179)||(45489482-45489571)
chr1 (91-154)||(23819063-23819126)
chr1 (89-179)||(24782839-24782929)
chr1 (90-179)||(23763489-23763578)
chr1 (90-147)||(45310137-45310194)
chr1 (99-179)||(21438081-21438161)
chr1 (20-76)||(48603739-48603795)
[»] chr8 (49 HSPs)
chr8 (20-242)||(21395657-21395879)
chr8 (20-242)||(21790150-21790372)
chr8 (22-242)||(21389127-21389347)
chr8 (20-242)||(19899317-19899539)
chr8 (20-242)||(16184950-16185172)
chr8 (20-242)||(17353612-17353834)
chr8 (20-242)||(19976667-19976889)
chr8 (28-242)||(21168396-21168610)
chr8 (20-242)||(19983315-19983537)
chr8 (20-242)||(24755943-24756165)
chr8 (20-242)||(30642966-30643188)
chr8 (83-242)||(22010354-22010513)
chr8 (20-242)||(23776509-23776732)
chr8 (83-242)||(20465714-20465873)
chr8 (20-242)||(377500-377722)
chr8 (86-242)||(19259276-19259432)
chr8 (20-242)||(15602692-15602914)
chr8 (20-242)||(15611144-15611366)
chr8 (20-242)||(17926382-17926604)
chr8 (120-242)||(16409930-16410052)
chr8 (91-162)||(23846771-23846842)
chr8 (90-179)||(15532166-15532255)
chr8 (90-179)||(24433976-24434065)
chr8 (91-179)||(22113467-22113555)
chr8 (91-179)||(22134970-22135058)
chr8 (90-179)||(15538726-15538815)
chr8 (28-133)||(21161842-21161947)
chr8 (90-242)||(20856100-20856252)
chr8 (91-179)||(22166120-22166208)
chr8 (89-179)||(16231214-16231304)
chr8 (89-242)||(16861012-16861155)
chr8 (89-179)||(22028834-22028924)
chr8 (89-179)||(23834450-23834540)
chr8 (90-154)||(17828347-17828411)
chr8 (91-179)||(43252092-43252180)
chr8 (195-242)||(21161790-21161837)
chr8 (93-179)||(17055128-17055214)
chr8 (99-179)||(22045145-22045225)
chr8 (93-149)||(32598959-32599015)
chr8 (93-149)||(32605491-32605547)
chr8 (90-146)||(39094713-39094769)
chr8 (90-179)||(18619756-18619845)
chr8 (90-179)||(20527727-20527816)
chr8 (90-179)||(30308493-30308582)
chr8 (91-147)||(21972355-21972411)
chr8 (91-147)||(21976440-21976496)
chr8 (114-161)||(22875385-22875432)
chr8 (122-242)||(16411944-16412064)
chr8 (91-179)||(19278023-19278110)
[»] scaffold0004 (3 HSPs)
scaffold0004 (20-242)||(70018-70240)
scaffold0004 (89-179)||(10323-10413)
scaffold0004 (90-179)||(58157-58246)
[»] chr5 (48 HSPs)
chr5 (23-242)||(26704291-26704510)
chr5 (23-242)||(26974024-26974243)
chr5 (20-242)||(37724126-37724348)
chr5 (20-242)||(14079370-14079592)
chr5 (20-242)||(22032538-22032760)
chr5 (30-242)||(23512339-23512551)
chr5 (20-242)||(23201590-23201813)
chr5 (20-242)||(23501020-23501242)
chr5 (20-242)||(18769679-18769901)
chr5 (20-242)||(21366341-21366563)
chr5 (98-242)||(21887124-21887268)
chr5 (83-221)||(23572364-23572502)
chr5 (88-242)||(20805837-20805991)
chr5 (89-179)||(23535328-23535418)
chr5 (20-144)||(21873471-21873595)
chr5 (89-179)||(17410724-17410814)
chr5 (89-179)||(20910539-20910629)
chr5 (89-162)||(18356604-18356677)
chr5 (91-179)||(21884928-21885016)
chr5 (98-242)||(31342403-31342547)
chr5 (90-179)||(21340506-21340595)
chr5 (90-179)||(26665870-26665959)
chr5 (90-179)||(26937467-26937556)
chr5 (91-179)||(19472458-19472546)
chr5 (91-159)||(26172743-26172811)
chr5 (89-148)||(1858746-1858805)
chr5 (89-179)||(23451634-23451724)
chr5 (89-179)||(23463139-23463229)
chr5 (90-147)||(123076-123133)
chr5 (90-179)||(16674430-16674519)
chr5 (90-179)||(20232828-20232917)
chr5 (90-162)||(17918907-17918979)
chr5 (91-179)||(20296127-20296215)
chr5 (89-179)||(23458878-23458968)
chr5 (90-179)||(12028304-12028393)
chr5 (98-175)||(17718182-17718259)
chr5 (98-179)||(24222174-24222255)
chr5 (90-179)||(24532787-24532876)
chr5 (98-162)||(18774490-18774554)
chr5 (90-162)||(26742502-26742574)
chr5 (90-154)||(42805698-42805762)
chr5 (91-154)||(25229170-25229233)
chr5 (91-154)||(25293326-25293389)
chr5 (90-179)||(21295002-21295091)
chr5 (90-179)||(25535266-25535355)
chr5 (90-179)||(26680868-26680957)
chr5 (90-179)||(26952475-26952564)
chr5 (101-162)||(18784336-18784397)
[»] scaffold0102 (1 HSPs)
scaffold0102 (20-242)||(48135-48357)
[»] chr2 (42 HSPs)
chr2 (20-242)||(23038257-23038479)
chr2 (20-242)||(22740635-22740857)
chr2 (20-242)||(22798801-22799023)
chr2 (20-242)||(22758390-22758612)
chr2 (20-221)||(40621904-40622105)
chr2 (20-242)||(23019381-23019603)
chr2 (55-240)||(23100907-23101092)
chr2 (20-242)||(45677830-45678052)
chr2 (20-242)||(25963392-25963614)
chr2 (20-242)||(37524886-37525108)
chr2 (20-242)||(21917991-21918213)
chr2 (86-240)||(24673864-24674018)
chr2 (91-179)||(15477883-15477971)
chr2 (91-159)||(19928261-19928329)
chr2 (90-179)||(22460929-22461018)
chr2 (138-242)||(22811609-22811713)
chr2 (89-179)||(19688495-19688585)
chr2 (89-179)||(24735680-24735770)
chr2 (91-179)||(12901251-12901339)
chr2 (91-179)||(24649636-24649724)
chr2 (91-179)||(27379171-27379259)
chr2 (91-179)||(27383217-27383305)
chr2 (83-242)||(44369974-44370133)
chr2 (91-149)||(27602076-27602134)
chr2 (90-179)||(18855200-18855289)
chr2 (90-179)||(23187353-23187442)
chr2 (90-179)||(23598616-23598705)
chr2 (98-179)||(24655077-24655158)
chr2 (98-179)||(24870177-24870258)
chr2 (91-179)||(24628217-24628305)
chr2 (190-242)||(24658032-24658084)
chr2 (103-242)||(24716216-24716345)
chr2 (93-149)||(26125484-26125540)
chr2 (91-147)||(41530780-41530836)
chr2 (93-149)||(41667230-41667286)
chr2 (98-179)||(24175097-24175178)
chr2 (91-179)||(61094-61182)
chr2 (98-146)||(25961306-25961354)
chr2 (91-154)||(21327330-21327393)
chr2 (20-58)||(23103255-23103293)
chr2 (98-154)||(21318399-21318455)
chr2 (98-146)||(40428762-40428810)
[»] scaffold0139 (1 HSPs)
scaffold0139 (20-242)||(20205-20427)
[»] scaffold0131 (1 HSPs)
scaffold0131 (20-242)||(36680-36902)
[»] chr3 (57 HSPs)
chr3 (20-242)||(15877503-15877725)
chr3 (30-242)||(23408664-23408876)
chr3 (20-242)||(15060513-15060735)
chr3 (86-242)||(12173073-12173229)
chr3 (83-242)||(16369692-16369851)
chr3 (20-242)||(856357-856579)
chr3 (20-242)||(12496476-12496698)
chr3 (20-242)||(18383592-18383814)
chr3 (27-242)||(14878180-14878396)
chr3 (20-242)||(15051737-15051959)
chr3 (20-242)||(23077153-23077375)
chr3 (22-239)||(19725590-19725807)
chr3 (27-242)||(23052752-23052967)
chr3 (20-242)||(11298204-11298426)
chr3 (20-242)||(322810-323032)
chr3 (83-242)||(12037628-12037787)
chr3 (83-242)||(26190684-26190843)
chr3 (89-179)||(7793085-7793175)
chr3 (89-179)||(15849824-15849914)
chr3 (89-179)||(16797793-16797883)
chr3 (90-179)||(326903-326992)
chr3 (90-179)||(1598219-1598308)
chr3 (90-179)||(3833952-3834041)
chr3 (90-179)||(11300250-11300339)
chr3 (20-121)||(17524948-17525049)
chr3 (89-179)||(2897562-2897652)
chr3 (89-179)||(15482939-15483029)
chr3 (89-179)||(16808620-16808710)
chr3 (20-154)||(16909971-16910105)
chr3 (89-179)||(20461239-20461329)
chr3 (90-179)||(15941643-15941732)
chr3 (90-179)||(17242250-17242339)
chr3 (90-179)||(38814662-38814751)
chr3 (86-242)||(11863078-11863232)
chr3 (92-179)||(1982549-1982636)
chr3 (53-179)||(20723242-20723368)
chr3 (152-242)||(321689-321779)
chr3 (91-149)||(15617656-15617714)
chr3 (89-162)||(31097310-31097383)
chr3 (91-179)||(7109981-7110069)
chr3 (91-179)||(7113916-7114004)
chr3 (86-242)||(11851860-11852014)
chr3 (91-179)||(16697071-16697159)
chr3 (91-179)||(22337002-22337090)
chr3 (91-179)||(27409382-27409470)
chr3 (90-179)||(11594878-11594967)
chr3 (90-179)||(42326222-42326311)
chr3 (91-179)||(11855015-11855103)
chr3 (91-179)||(16690498-16690586)
chr3 (91-179)||(22321947-22322035)
chr3 (98-179)||(3402694-3402775)
chr3 (90-179)||(24188055-24188144)
chr3 (90-179)||(55149256-55149345)
chr3 (91-149)||(28950007-28950065)
chr3 (189-242)||(17524849-17524902)
chr3 (99-179)||(839533-839613)
chr3 (98-146)||(11557156-11557204)
[»] scaffold0031 (2 HSPs)
scaffold0031 (20-242)||(65468-65690)
scaffold0031 (89-179)||(53842-53932)
[»] scaffold0261 (1 HSPs)
scaffold0261 (20-242)||(1562-1784)
[»] scaffold0101 (1 HSPs)
scaffold0101 (20-242)||(8632-8854)
[»] scaffold0021 (1 HSPs)
scaffold0021 (20-242)||(174989-175211)
[»] chr4 (43 HSPs)
chr4 (20-242)||(13569734-13569956)
chr4 (20-242)||(15093995-15094217)
chr4 (20-242)||(44675854-44676076)
chr4 (20-242)||(12570243-12570465)
chr4 (83-242)||(15121478-15121637)
chr4 (29-242)||(15124829-15125042)
chr4 (20-242)||(23843700-23843923)
chr4 (20-242)||(16356628-16356850)
chr4 (27-239)||(16487756-16487968)
chr4 (91-179)||(9556809-9556897)
chr4 (91-179)||(16243139-16243227)
chr4 (89-179)||(36133701-36133791)
chr4 (91-179)||(18222117-18222205)
chr4 (92-179)||(16678328-16678415)
chr4 (89-162)||(1951517-1951590)
chr4 (90-179)||(15353045-15353134)
chr4 (98-179)||(45938433-45938514)
chr4 (91-179)||(2015057-2015145)
chr4 (92-179)||(19757340-19757427)
chr4 (92-179)||(19782379-19782466)
chr4 (90-179)||(17152226-17152315)
chr4 (90-179)||(23139548-23139637)
chr4 (90-179)||(26243404-26243493)
chr4 (91-179)||(28569183-28569271)
chr4 (91-179)||(33742657-33742745)
chr4 (90-149)||(27534303-27534362)
chr4 (91-149)||(4561102-4561160)
chr4 (91-149)||(5756706-5756764)
chr4 (90-179)||(11250300-11250389)
chr4 (90-179)||(18237170-18237259)
chr4 (89-149)||(43255930-43255990)
chr4 (98-175)||(3413082-3413159)
chr4 (90-179)||(23838711-23838800)
chr4 (98-179)||(25555802-25555883)
chr4 (93-146)||(42997222-42997275)
chr4 (93-149)||(14708403-14708459)
chr4 (166-242)||(16348367-16348443)
chr4 (98-146)||(16351620-16351668)
chr4 (89-179)||(41385484-41385574)
chr4 (90-179)||(9530711-9530800)
chr4 (90-179)||(14679240-14679329)
chr4 (99-179)||(14685458-14685538)
chr4 (101-149)||(18602514-18602562)
[»] scaffold0324 (1 HSPs)
scaffold0324 (40-242)||(15643-15845)
[»] scaffold0081 (3 HSPs)
scaffold0081 (20-242)||(14894-15115)
scaffold0081 (20-242)||(23909-24130)
scaffold0081 (20-242)||(39333-39554)
[»] scaffold0043 (2 HSPs)
scaffold0043 (20-242)||(18462-18684)
scaffold0043 (91-179)||(76910-76998)
[»] scaffold0111 (2 HSPs)
scaffold0111 (29-242)||(32665-32878)
scaffold0111 (91-149)||(8778-8836)
[»] scaffold0671 (1 HSPs)
scaffold0671 (20-228)||(6325-6533)
[»] scaffold0174 (1 HSPs)
scaffold0174 (20-242)||(18128-18350)
[»] scaffold0149 (2 HSPs)
scaffold0149 (20-242)||(3964-4185)
scaffold0149 (20-242)||(8395-8616)
[»] scaffold0096 (1 HSPs)
scaffold0096 (28-242)||(16024-16238)
[»] scaffold0198 (1 HSPs)
scaffold0198 (103-242)||(26706-26845)
[»] scaffold0080 (1 HSPs)
scaffold0080 (83-242)||(18331-18490)
[»] scaffold0311 (1 HSPs)
scaffold0311 (20-242)||(6753-6975)
[»] scaffold0215 (1 HSPs)
scaffold0215 (23-242)||(27048-27267)
[»] scaffold0042 (4 HSPs)
scaffold0042 (20-242)||(34585-34807)
scaffold0042 (83-242)||(41228-41387)
scaffold0042 (90-162)||(64131-64203)
scaffold0042 (90-149)||(76015-76074)
[»] scaffold0297 (1 HSPs)
scaffold0297 (20-242)||(15354-15566)
[»] scaffold0210 (2 HSPs)
scaffold0210 (20-242)||(21481-21703)
scaffold0210 (20-242)||(29373-29595)
[»] scaffold0023 (3 HSPs)
scaffold0023 (20-232)||(23352-23564)
scaffold0023 (128-242)||(38175-38289)
scaffold0023 (20-76)||(38320-38376)
[»] scaffold0017 (3 HSPs)
scaffold0017 (98-242)||(190956-191100)
scaffold0017 (99-242)||(192659-192802)
scaffold0017 (91-179)||(56376-56464)
[»] scaffold0761 (1 HSPs)
scaffold0761 (27-242)||(5984-6199)
[»] scaffold0056 (1 HSPs)
scaffold0056 (83-242)||(13752-13911)
[»] scaffold0035 (1 HSPs)
scaffold0035 (20-242)||(46402-46624)
[»] scaffold0412 (1 HSPs)
scaffold0412 (20-242)||(6091-6313)
[»] scaffold0393 (1 HSPs)
scaffold0393 (20-242)||(1712-1934)
[»] scaffold0020 (1 HSPs)
scaffold0020 (120-240)||(178974-179094)
[»] scaffold0676 (1 HSPs)
scaffold0676 (83-242)||(4712-4871)
[»] scaffold0029 (3 HSPs)
scaffold0029 (83-242)||(13043-13202)
scaffold0029 (91-149)||(61381-61439)
scaffold0029 (94-179)||(65267-65352)
[»] scaffold1124 (1 HSPs)
scaffold1124 (20-242)||(2098-2320)
[»] scaffold0615 (1 HSPs)
scaffold0615 (20-242)||(1759-1981)
[»] scaffold0114 (1 HSPs)
scaffold0114 (20-242)||(7512-7734)
[»] scaffold0216 (1 HSPs)
scaffold0216 (89-242)||(16796-16949)
[»] scaffold0008 (2 HSPs)
scaffold0008 (89-242)||(30420-30573)
scaffold0008 (93-149)||(2157-2213)
[»] scaffold0158 (2 HSPs)
scaffold0158 (87-242)||(3128-3283)
scaffold0158 (87-242)||(6794-6949)
[»] scaffold0104 (2 HSPs)
scaffold0104 (101-240)||(2129-2268)
scaffold0104 (101-240)||(9811-9950)
[»] scaffold1296 (1 HSPs)
scaffold1296 (20-230)||(612-822)
[»] scaffold0476 (2 HSPs)
scaffold0476 (88-242)||(5872-6026)
scaffold0476 (88-242)||(7067-7221)
[»] scaffold0367 (1 HSPs)
scaffold0367 (88-242)||(1183-1337)
[»] scaffold0013 (1 HSPs)
scaffold0013 (89-179)||(2412-2502)
[»] scaffold0425 (1 HSPs)
scaffold0425 (18-242)||(377-601)
[»] scaffold0555 (1 HSPs)
scaffold0555 (20-161)||(804-945)
[»] scaffold0037 (1 HSPs)
scaffold0037 (20-232)||(21254-21466)
[»] scaffold0327 (1 HSPs)
scaffold0327 (88-242)||(566-710)
[»] scaffold1895 (2 HSPs)
scaffold1895 (128-242)||(923-1037)
scaffold1895 (28-108)||(1036-1116)
[»] scaffold0228 (1 HSPs)
scaffold0228 (89-179)||(18371-18461)
[»] scaffold0044 (3 HSPs)
scaffold0044 (89-179)||(19465-19555)
scaffold0044 (89-179)||(13181-13271)
scaffold0044 (93-149)||(62541-62597)
[»] scaffold0036 (1 HSPs)
scaffold0036 (89-179)||(66154-66244)
[»] scaffold0009 (1 HSPs)
scaffold0009 (89-179)||(228112-228202)
[»] scaffold0003 (4 HSPs)
scaffold0003 (89-179)||(71590-71680)
scaffold0003 (89-179)||(96883-96973)
scaffold0003 (90-179)||(139988-140077)
scaffold0003 (98-146)||(413822-413870)
[»] scaffold1461 (1 HSPs)
scaffold1461 (90-179)||(207-296)
[»] scaffold1326 (1 HSPs)
scaffold1326 (83-242)||(1175-1324)
[»] scaffold0585 (1 HSPs)
scaffold0585 (91-179)||(9613-9701)
[»] scaffold0220 (1 HSPs)
scaffold0220 (83-238)||(4612-4767)
[»] scaffold0193 (1 HSPs)
scaffold0193 (93-179)||(9701-9787)
[»] scaffold0107 (1 HSPs)
scaffold0107 (89-179)||(15157-15247)
[»] scaffold0001 (1 HSPs)
scaffold0001 (89-179)||(173567-173657)
[»] scaffold1220 (1 HSPs)
scaffold1220 (89-158)||(2079-2148)
[»] scaffold0410 (1 HSPs)
scaffold0410 (90-179)||(11658-11747)
[»] scaffold0177 (1 HSPs)
scaffold0177 (89-162)||(13243-13316)
[»] scaffold0168 (1 HSPs)
scaffold0168 (89-162)||(3286-3359)
[»] scaffold0120 (1 HSPs)
scaffold0120 (90-179)||(19756-19845)
[»] scaffold0070 (1 HSPs)
scaffold0070 (90-179)||(10181-10270)
[»] scaffold0012 (1 HSPs)
scaffold0012 (90-179)||(24707-24796)
[»] scaffold0483 (1 HSPs)
scaffold0483 (89-165)||(608-684)
[»] scaffold0109 (3 HSPs)
scaffold0109 (89-165)||(45395-45471)
scaffold0109 (91-149)||(11071-11129)
scaffold0109 (91-149)||(38588-38646)
[»] scaffold0280 (1 HSPs)
scaffold0280 (89-179)||(19030-19120)
[»] scaffold0010 (2 HSPs)
scaffold0010 (90-179)||(23494-23583)
scaffold0010 (90-179)||(242335-242424)
[»] scaffold0372 (1 HSPs)
scaffold0372 (91-179)||(4840-4928)
[»] scaffold0346 (1 HSPs)
scaffold0346 (89-205)||(15374-15490)
[»] scaffold0342 (1 HSPs)
scaffold0342 (90-146)||(7042-7098)
[»] scaffold0284 (1 HSPs)
scaffold0284 (91-179)||(18633-18721)
[»] scaffold1552 (1 HSPs)
scaffold1552 (98-175)||(639-716)
[»] scaffold0439 (2 HSPs)
scaffold0439 (98-179)||(2174-2255)
scaffold0439 (98-149)||(10064-10115)
[»] scaffold0184 (1 HSPs)
scaffold0184 (90-147)||(3995-4052)
[»] scaffold0171 (1 HSPs)
scaffold0171 (90-179)||(35249-35338)
[»] scaffold0132 (1 HSPs)
scaffold0132 (90-179)||(36583-36672)
[»] scaffold0064 (1 HSPs)
scaffold0064 (189-242)||(64338-64391)
[»] scaffold0371 (1 HSPs)
scaffold0371 (93-149)||(15618-15674)
[»] scaffold0028 (1 HSPs)
scaffold0028 (91-179)||(58457-58545)
[»] scaffold0130 (1 HSPs)
scaffold0130 (90-149)||(5769-5828)
[»] scaffold0546 (1 HSPs)
scaffold0546 (91-149)||(2178-2236)
[»] scaffold0334 (1 HSPs)
scaffold0334 (94-179)||(18099-18184)
[»] scaffold0015 (1 HSPs)
scaffold0015 (90-179)||(192055-192144)
[»] scaffold0079 (1 HSPs)
scaffold0079 (166-242)||(44418-44494)
[»] scaffold0034 (1 HSPs)
scaffold0034 (93-149)||(16432-16488)
[»] scaffold0138 (1 HSPs)
scaffold0138 (89-179)||(29946-30036)
[»] scaffold0637 (1 HSPs)
scaffold0637 (90-179)||(8849-8938)


Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 10 - 242
Target Start/End: Complemental strand, 15041457 - 15041225
Alignment:
Q  10 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15041457 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 15041358  T
Q  110 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 209  Q
    | | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  15041357 ttgcgaggcgagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaggttcaatctcattctaagttatc 15041258  T
Q  210 atctaatctttattaaacatcttcaggcactca 242  Q
    |||||| ||||||||||||||||||||||||||    
T  15041257 atctaacctttattaaacatcttcaggcactca 15041225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 19863202 - 19863424
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| || |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  19863202 taggtctcattactacccaagggtccatctctaatcaaatgatgtgacacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcg 19863301  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| | | | ||||||||||||||||||||||| |||||||    
T  19863302 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaacaaggttcaatctcattctaagttatcatttaatctt 19863401  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||  ||||||||||||||||    
T  19863402 taataggcatcttcaggcactca 19863424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 22432474 - 22432696
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||| |||||||  ||| || |||||||||  || ||| ||||||||||| ||||||||||| ||| |||||     
T  22432474 taggtctcattactacccaagggtccatctcaaatcaaataatgagacacagatcgcaatatactaacttgcactcagttctggaagtgctcgcgaggcg 22432573  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||| | | | |||||||| |||||||||||||| |||||||    
T  22432574 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaagttgttcaaggttaaactaggttcaatctcgttctaagttatcatttaatctt 22432673  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || || ||||||||| |||||||    
T  22432674 taatatacatcttcatgcactca 22432696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 242
Target Start/End: Complemental strand, 16924786 - 16924554
Alignment:
Q  10 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 109  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||     
T  16924786 acatcatccttaggtctcattactacccaggggtccactcctaatcaaagcatgcgacacagatcgcattaaactcacttgcactcagttctggaagtgc 16924687  T
Q  110 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 209  Q
    ||| ||||| |||||||||||||| ||||||||||||| | |||| | |||||| |  || ||||||||||||||| |  ||||||  | ||||||||||    
T  16924686 tcgcgaggcgagagcatctgctcgccatggcgagtacaggccagacttccaacattgattattctaggttaatccaggtccaatcttgtcctaagttatc 16924587  T
Q  210 atctaatctttattaaacatcttcaggcactca 242  Q
    ||| | |||||||||| |||||||||| |||||    
T  16924586 atcaattctttattaagcatcttcaggaactca 16924554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 25642080 - 25641858
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||| ||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  25642080 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagttcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 25641981  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| | |||||||| |||| ||||||||||||||  ||||||||| ||||| | | | |||||||| |||||||||||||| |||||||    
T  25641980 agagcatctgctcgccgtggcgagttcaagccagattcccaacaaaggttgttctatgttaaactaggttcaatctcgttctaagttatcatttaatctt 25641881  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || || |||||||||||||||||    
T  25641880 taatatacatcttcaggcactca 25641858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 10 - 242
Target Start/End: Complemental strand, 16965217 - 16964985
Alignment:
Q  10 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 109  Q
    |||||||| |||||| | |||||||||||||||||||   ||||||||| ||||||| ||||||| | ||||||||||||||||| | |||||||||||     
T  16965217 acatcatccttaggtattattactacccaggggtccactcctaatcaaagcatgcgacacagatcacattaaactcacttgcactaagttctggaagtgc 16965118  T
Q  110 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 209  Q
    ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||| |  |||||||||||||||||| |  ||||||| | ||||||||||    
T  16965117 tcgtgaggcgagagcatctgctcgccatggcgagtacaagccagacttccaacattgattgttctaggttaatccaggtccaatctcgtcctaagttatc 16965018  T
Q  210 atctaatctttattaaacatcttcaggcactca 242  Q
     || | |||||||||| ||||||||||||||||    
T  16965017 ttcaattctttattaagcatcttcaggcactca 16964985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 31164754 - 31164586
Alignment:
Q  10 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 109  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||      
T  31164754 acatcaacattaggtctcactactacccaggggtccatctctaatcaaaacatgcgacacaggtcgcattaaactcacttgcactcaattctggaagtac 31164655  T
Q  110 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggt 178  Q
    ||| |||||||| |||| |||||  ||||||||||||||| ||| ||||||| ||  ||||||||||||    
T  31164654 tcgcgaggcaagggcatatgctcaccatggcgagtacaagccaggttcccaataaaggttgttctaggt 31164586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 22439028 - 22439246
Alignment:
Q  24 tctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagag 123  Q
    ||||||||||||||| ||||||||||| |||| ||  |||||| |||||||||  ||  |||||||||||||| || |||||||| ||| ||||| ||||    
T  22439028 tctcattactacccaagggtccatctcaaatcgaattatgcgacacagatcgcaatattctcacttgcactcagttgtggaagtgctcgcgaggcgagag 22439127  T
Q  124 catctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttatt 223  Q
    ||||||||||  |||||||||||||| ||||||||| |||| |||||||||||||||| | | | |||||||| || ||||||||||| ||| ||||| |    
T  22439128 catctgctcgctatggcgagtacaagccagattccctacaaaagttgttctaggttaaactaggttcaatctcgttataagttatcatttaagctttaat 22439227  T
Q  224 aaacatcttcaggcactca 242  Q
    | |||||||||||||||||    
T  22439228 atacatcttcaggcactca 22439246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 10 - 242
Target Start/End: Complemental strand, 16929497 - 16929269
Alignment:
Q  10 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 109  Q
    |||||||| |||||| ||||||||||| |||||||||   ||||||||| ||||||| ||||||||| ||||||||    ||||||| || |  |||||     
T  16929497 acatcatccttaggtatcattactaccgaggggtccactcctaatcaaagcatgcgacacagatcgcattaaactc----gcactcagttttcaaagtgc 16929402  T
Q  110 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 209  Q
    ||| ||||| |||||||||||||| ||||||||||||| | |||| | |||||| || |||||||||||||||||| |  ||||||||| | ||||||||    
T  16929401 tcgcgaggcgagagcatctgctcgccatggcgagtacaggccagacttccaacattaattgttctaggttaatccaggtccaatctcatcccaagttatc 16929302  T
Q  210 atctaatctttattaaacatcttcaggcactca 242  Q
    ||| | |||||||||| ||||||||||||||||    
T  16929301 atcaattctttattaagcatcttcaggcactca 16929269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 21739919 - 21739697
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| |||| |||  |||| || |||||||||   |  |||| ||| ||||| ||||||||||| ||| |||||     
T  21739919 taggtcacattactacctaagagtccatccctaaacaactcatgtgacacagatcgcaacattctcaattgtactcagttctggaagtgctcgcgaggcg 21739820  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||  ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  21739819 agagcatctgctcaccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 21739720  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  21739719 tagtaaacatctttaggcactca 21739697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 19873344 - 19873488
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||||||| |||  |||||| |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  19873344 taggtctcattactacccaagggtccatctctaataaaatgatgcgacacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcg 19873443  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaa 164  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||    
T  19873444 agagcatctgctcgccatggcgagtacaagccagattccctacaa 19873488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 242
Target Start/End: Original strand, 18180780 - 18180933
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 188  Q
    |||| ||| ||||||||||| ||| ||||| |||||||||||||  ||||||||||||||| |||||| |||||   |||||||||| | ||| ||| |     
T  18180780 tgcattcagttctggaagtgctcgcgaggcgagagcatctgctctccatggcgagtacaagccagatttccaactcaagttgttctatgctaaaccaggt 18180879  T
Q  189 tcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| ||||||||||| | ||| ||||||||||| |||||||||| |||||||||    
T  18180880 tcactctcattctaaatcatcctctaatctttaataaacatcttaaggcactca 18180933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 22334788 - 22334647
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||| ||||||||||||||| |||||||||||  |||||| |||||||||  ||  |||||||||| ||| ||||||||||| ||| |||||     
T  22334788 taggtctcattgctacccaggggtccaactctaatcaaattatgcgacacagatcgcaatatcctcacttgcattcagttctggaagtgctcgcgaggcg 22334689  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 161  Q
    |||||||||||||  ||||||||||  | |||||| ||||||    
T  22334688 agagcatctgctcaccatggcgagtttaggtcagaatcccaa 22334647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 231
Target Start/End: Original strand, 18907330 - 18907542
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||||| ||||||||  ||||||| |||||||||   |  |||| ||||||||  ||||||||||| ||| |||||     
T  18907330 taggtcacattactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacattctcatttgcactctgttctggaagtgctcgcgaggcg 18907429  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattcta-agttatcatctaatct 218  Q
    |||||||||||||| ||||||||   |||| |||||| ||||| | |||||||||| | ||| ||| | ||||||||||||||  |||||||  ||||||    
T  18907430 agagcatctgctcgccatggcgaaatcaagccagatttccaactaaagttgttctaagctaagccaggttcaatctcattctagggttatcagttaatct 18907529  T
Q  219 ttattaaacatct 231  Q
    ||| || ||||||    
T  18907530 ttaatacacatct 18907542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 16523300 - 16523078
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | || |||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  16523300 taggtcacattactacctaaggatccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 16523201  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||||||  ||| | |||||   |||||||||| | ||| |||   |||||||| |||||| | || ||||||||||    
T  16523200 agagcatctgctcgccatggcgagtacaagctagaattccaacttaagttgttctaagctaaaccagattcaatctcgttctaaatcattatctaatctt 16523101  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||| ||||    
T  16523100 taataaacatcttaaggcgctca 16523078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 242
Target Start/End: Complemental strand, 21834767 - 21834565
Alignment:
Q  40 gggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatgg 139  Q
    ||||||||| ||||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| ||||| ||||||||| |||| |||||    
T  21834767 gggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctactcgccatgg 21834668  T
Q  140 cgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcac 239  Q
     || |||||| |||| | ||||| | |||||||||| | |||  || | |||||||| |||||| | ||||||||||||||| ||||||| || ||||||    
T  21834667 tgattacaagccagaattccaactaaagttgttctaagctaaatcaggttcaatctcgttctaaatcatcatctaatctttaataaacatttttaggcac 21834568  T
Q  240 tca 242  Q
    |||    
T  21834567 tca 21834565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 17804474 - 17804564
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  17804474 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 17804564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 27415771 - 27415681
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  27415771 tgcactcaattctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 27415681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 12496586 - 12496675
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  12496586 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 12496675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 18955591 - 18955502
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||  |||||| ||| ||||| |||||||||||||||||||||||||||||| |||||||||||| |  ||||||| |||||    
T  18955591 gcactcaattcgagaagtgctcgcgaggcgagagcatctgctcgtcatggcgagtacaagccagattcccaactaaggttgttccaggtt 18955502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 22429859 - 22429788
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattccca 160  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  22429859 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccca 22429788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 1644983 - 1645072
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  1644983 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 1645072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 12706966 - 12707055
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||||||||||| |  ||||||| |||||    
T  12706966 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgttccaggtt 12707055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 20907809 - 20907720
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || |||||||||||||    
T  20907809 gcactcagttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttctaggtt 20907720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 9482120 - 9482032
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| ||||||| ||||||||||||| |||||||| ||| |||||||| |  ||||||| |||||    
T  9482120 cactcaattctggaagtgctcgcgaggcgagagcatatgctcgtcatggcaagtacaagccaggttcccaactaaggttgttccaggtt 9482032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 16741484 - 16741556
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||    
T  16741484 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaac 16741556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 23990200 - 23990288
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||| ||  || ||||| |  |||||||||||||    
T  23990200 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgtcgtggcgagtacaagccaactttccaactaaggttgttctaggtt 23990288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 21702568 - 21702654
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| || ||| ||||| |  ||||||| |||||    
T  21702568 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaatttccaactaaggttgttccaggtt 21702654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 19663046 - 19663135
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| || |||||||| ||| ||||| | |||||||||||| ||||||||||||||| |||| |||||||||  ||||||| |||||    
T  19663046 gcactcagttttggaagtgctcgcgaggcgatagcatctgctcgccatggcgagtacaagccagaatcccaacaaaggttgttccaggtt 19663135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 19790599 - 19790518
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||||||  | |||||| ||||| || ||||||| |||||    
T  19790599 ttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttccaggtt 19790518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 22863224 - 22863313
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  22863224 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 22863313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 8244140 - 8244228
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  8244140 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 8244228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 11567142 - 11567230
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  11567142 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 11567230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 14472548 - 14472620
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| || |||||||||    
T  14472548 gcactcaattctggatgtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagccaaattcccaac 14472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 23395348 - 23395436
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  23395348 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 23395436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 22059577 - 22059418
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| |||| |||||| | | ||||| |||||||||||||| |||||| |||||||| |||| | | | | |  ||||||||| | |||     
T  22059577 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagccagaattcaacctaatgttgttctaagctaaa 22059478  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | |||||||  |||||| | || |||||||||||| ||  ||||||||||||||||    
T  22059477 ccaggttcaatcttgttctaaatcattatctaatctttaatatgcatcttcaggcactca 22059418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 22405860 - 22405741
Alignment:
Q  122 agcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    |||||||||||| ||||||||||||||  |||||| ||| |   |||||||||| | ||| | | | |||||||| |||||| | |||||| ||||||||    
T  22405860 agcatctgctcgccatggcgagtacaacccagatttccatctcaagttgttctaagctaaacaaggttcaatctcgttctaaatcatcatccaatcttta 22405761  T
Q  222 ttaaacatcttcaggcactc 241  Q
    ||||||||||  ||||||||    
T  22405760 ttaaacatctcaaggcactc 22405741  T

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Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 19870870 - 19870928
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  19870870 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 19870928  T

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Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 25135499 - 25135441
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||| |||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  25135499 cactcgattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 25135441  T

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Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 5616642 - 5616553
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  5616642 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 5616553  T

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Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 15894326 - 15894185
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||| |||   |||||| ||||  |||      |||||||||||||| ||||||||||| ||| ||||      
T  15894326 taggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggacgcaaagttctcacttgcactcagttctggaagtgctcgcgaggtg 15894227  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 161  Q
    ||||  |||||||| |||||||||| || |||||| ||||||    
T  15894226 agagactctgctcgccatggcgagttcaggtcagaatcccaa 15894185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 23657248 - 23657191
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||    
T  23657248 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 23657191  T

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Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 25766972 - 25766907
Alignment:
Q  114 gaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  25766972 gaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 25766907  T

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Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 1587558 - 1587470
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  1587558 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 1587470  T

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Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 12618671 - 12618583
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||  | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12618671 cactcaattctggaagtgctcgcgaggcgagagcatctgctcaccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12618583  T

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Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 18917093 - 18917005
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| |||||| ||| ||||| ||| |||||||||| | ||||||||||||| || ||| ||||| |  |||||||||||||    
T  18917093 cactcaattctagaagtgctcgcgaggcgagaacatctgctcgccgtggcgagtacaagccaaatttccaactaaggttgttctaggtt 18917005  T

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Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 22592624 - 22592568
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||    
T  22592624 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 22592568  T

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Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 27567436 - 27567348
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  27567436 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 27567348  T

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Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 20803370 - 20803317
Alignment:
Q  101 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  20803370 tggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 20803317  T

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Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 27553435 - 27553386
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatgg 139  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||    
T  27553435 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 27553386  T

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Target: chr7 (Bit Score: 139; Significance: 7e-73; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 18154733 - 18154511
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||||||||||||||||  ||||||||| |||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||||||| ||| |||||     
T  18154733 taggtctcattactacccaatggtccatctttaatcaaatcatgcgacacagatcgcatttccctcacttgcactcagttctggaagtgctcgcgaggcg 18154634  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  18154633 agagcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaagttcaatctcattctaagttatcatttaatctt 18154534  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||| ||||||||||||||||    
T  18154533 taataagcatcttcaggcactca 18154511  T

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Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 24054691 - 24054913
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||| ||  |||||| |||||||||  ||  ||||||| |||||| ||||||||||| |||  || |     
T  24054691 taggtctcattactacccaagggtccatctctaatcgaattatgcgacacagatcgcaatattctcactttcactcagttctggaagtgctcgcaagacg 24054790  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | | | |||||||| |||||||||||||| |||||||    
T  24054791 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaagttgttctaggttaaactaggttcaatctcgttctaagttatcatttaatctt 24054890  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || || |||||||||||||||||    
T  24054891 taatatacatcttcaggcactca 24054913  T

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Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 242
Target Start/End: Complemental strand, 19649382 - 19649159
Alignment:
Q  19 ttaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggc 118  Q
    |||||||||| ||||||||| |||||||||||||||||||  |||||| |||||||||  ||  ||||||| |||||  ||||||||||| ||| ||| |    
T  19649382 ttaggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttacactcggttctggaagtgctcgcgagac 19649283  T
Q  119 aagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatct 218  Q
     |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| |||| |    
T  19649282 gagagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatat 19649183  T
Q  219 ttattaaacatcttcaggcactca 242  Q
    ||| ||  ||||||||||||||||    
T  19649182 ttaataggcatcttcaggcactca 19649159  T

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Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 9703489 - 9703711
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||| |||||| |||||||||||||||||||  |||||| || ||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  9703489 taggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 9703588  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  9703589 agagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 9703688  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||| || ||| |||||||||    
T  9703689 taataaccacctttaggcactca 9703711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 11880475 - 11880697
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| ||||||||||| |||||||  |||||| ||| |||||   |  |||||||||||||| ||||||||||| ||  |||||     
T  11880475 taggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaacatcctcacttgcactcagttctggaagtgctcacgaggcg 11880574  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  11880575 agagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 11880674  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  11880675 taataaacatctttaggcactca 11880697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 12321639 - 12321417
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| ||||||||  ||||||| |||||||||   |  |||| ||||||||| ||||||||||| ||| |||||     
T  12321639 taggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgctacattctcatttgcactcagttctggaagtgctcgcgaggcg 12321540  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | |||  || | |||||||||||||| ||||||||||||||||    
T  12321539 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaatcaggttcaatctcattctaggttatcatctaatctt 12321440  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  12321439 taataaacatctttaggcactca 12321417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 17137960 - 17137738
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  17137960 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 17137861  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | ||| ||| | ||||||||||||||||| |||||||||||||    
T  17137860 agagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaaccaggttcaatctcattctaagtcatcatctaatctt 17137761  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  17137760 taataaacatctttaggcactca 17137738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 12187236 - 12187458
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| |  |||||||||||||||||  || || | | | ||| |  ||  |||||||||||||| ||||||||||| ||| |||||     
T  12187236 taggtctcattactacctaatggtccatctctaatcaattcaagcaacatatatcactatattctcacttgcactcagttctggaagtgctcgcgaggcg 12187335  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | |||  || | ||||||||||||||||||||||| |||||||    
T  12187336 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaatcaggttcaatctcattctaagttatcatttaatctt 12187435  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  12187436 taataaacatctttaggcactca 12187458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 10508916 - 10508757
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||| || |||||||||||| |  |||||| || |||||     
T  10508916 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaccagccagattcccaactaatgttgttataagttaaa 10508817  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
     || | ||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||    
T  10508816 tcaggttcaatctcattctaagttatcatttaatctttaataggcatcttcaggcactca 10508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 14430101 - 14430323
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  14430101 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 14430200  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  14430201 agagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 14430300  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||  |||||||||    
T  14430301 taataaacatctcaaggcactca 14430323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 2760413 - 2760572
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| ||||||||||| ||| ||||| ||||||||| |||| |||| |||||||||| || ||| |||||   |||||||| | | |||     
T  2760413 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatgacgagtacaagccatatttccaactccagttgttcgaagctaaa 2760512  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | |||||||| |||||| | |||||||||||||||||||||||||| |||||||||    
T  2760513 ccaggttcaatctcgttctaaatcatcatctaatctttattaaacatcttaaggcactca 2760572  T

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Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 18886 - 18814
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  18886 gcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattcccaac 18814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 13149433 - 13149521
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  13149433 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 13149521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 12318404 - 12318494
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| ||| ||||||||||| |||||||||||| |  ||||||| |||||    
T  12318404 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatagcgagtacaagccagattcccaactaaggttgttccaggtt 12318494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 48593285 - 48593212
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  48593285 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 48593212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 11312925 - 11313015
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||  ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  11312925 tgcactcagttctggaagtgctcccgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 11313015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 11987489 - 11987579
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  11987489 tgcactcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 11987579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 13635298 - 13635208
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||| ||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  13635298 tgcactcagttctggaagtgctcgcgaggcgagagcatctgttcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 13635208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 15605101 - 15605011
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||| |||||||||  |||||||||||||||||||| ||||||||||||||| ||||||| |||| |  ||||||| |||||    
T  15605101 tgcactcagttctagaagtggtcacgaggcaagagcatctgctcgccatggcgagtacaagccagattctcaactaaggttgttccaggtt 15605011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 26292673 - 26292762
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  26292673 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 26292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 12715144 - 12715232
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| |||||||||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12715144 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12715232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 6801490 - 6801579
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| || | ||||||| |  ||||||| |||||    
T  6801490 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaatcccaactaaggttgttccaggtt 6801579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 9593622 - 9593695
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| ||||||||||||||  |||||||||||||| |||||| |||||    
T  9593622 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagatttccaac 9593695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 9644585 - 9644658
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| ||||||||||||||  |||||||||||||| |||||| |||||    
T  9644585 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagatttccaac 9644658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 18557257 - 18557338
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  18557257 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactacggttgttctaggtt 18557338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 12718948 - 12719036
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12718948 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12719036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 12723859 - 12723947
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12723859 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12723947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 16438862 - 16438790
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||| ||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |||||||    
T  16438862 gcactcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 16438790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 16907027 - 16906939
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16907027 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16906939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 18279683 - 18279771
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  18279683 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 18279771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 18283646 - 18283734
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  18283646 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 18283734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 15211759 - 15211873
Alignment:
Q  128 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 227  Q
    |||||| |||||||||||||||  ||| ||||||| | ||||  |||  | ||| ||| | ||||||||||||||||||||||| ||||| ||  |||||    
T  15211759 tgctcgccatggcgagtacaagctagaatcccaactaaagttaatctgagctaaaccaggttcaatctcattctaagttatcatttaatcatttataaac 15211858  T
Q  228 atcttcaggcactca 242  Q
    ||||| |||||||||    
T  15211859 atctttaggcactca 15211873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 8917704 - 8917768
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    ||||||| ||||||||||| ||| |||||||||||||| ||||| ||| ||||||||||| ||||    
T  8917704 gcactcagttctggaagtgctcgcgaggcaagagcatcagctcgccattgcgagtacaagccaga 8917768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 15728603 - 15728691
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  15728603 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 15728691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 16114521 - 16114609
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| ||||||| |||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16114521 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16114609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 16117674 - 16117762
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| ||||||| |||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16117674 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16117762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 11262605 - 11262695
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  11262605 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 11262695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 11548096 - 11548006
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  11548096 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 11548006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 11554692 - 11554602
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  11554692 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 11554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 16275772 - 16275858
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||| ||| ||||| |||||||||| ||| |||||| |||||||| ||  |||||||| |  ||||||| |||||    
T  16275772 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcaagtacaagccaacttcccaactaaggttgttccaggtt 16275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 14217192 - 14217281
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||  |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  14217192 gcactcagttctggaagtgctcgcgaggtgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 14217281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 15580968 - 15581025
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    |||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  15580968 tgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 15581025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 9445978 - 9445930
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  9445978 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 9445930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 12692782 - 12692862
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  12692782 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 12692862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 13462039 - 13462103
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||| ||||||||| ||||    
T  13462039 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggtgagtacaagccaga 13462103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 14953484 - 14953564
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  14953484 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 14953564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 3272166 - 3272232
Alignment:
Q  176 ggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||||| |||| | |||||||  |||||| | ||| |||||||||||||||||||||| |||||||||    
T  3272166 ggttattccaggttcaatcttgttctaaatcatcctctaatctttattaaacatcttaaggcactca 3272232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 35151888 - 35151942
Alignment:
Q  95 caattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||| |||||||| ||| ||||| |||||||||||||  |||||||||||||||    
T  35151888 caattttggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaag 35151942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 25039038 - 25038949
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||  ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  25039038 gcactccaatctggaagtgctcgcgaggcgagagtatctactcaccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 25038949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 14959450 - 14959530
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||| ||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  14959450 tctgaaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 14959530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 20569416 - 20569368
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    |||| |||||| ||| ||||| |||||||||||||| ||||||||||||    
T  20569416 ttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 20569368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 7e-73; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 21714772 - 21714994
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||||||| ||| |||||     
T  21714772 taggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcg 21714871  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||    
T  21714872 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctt 21714971  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||| ||||||||||||||||    
T  21714972 taataagcatcttcaggcactca 21714994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 42865108 - 42864886
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  42865108 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 42865009  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  42865008 agagcatctgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 42864909  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||| ||| |||||||||    
T  42864908 taataaacaactttaggcactca 42864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 22468592 - 22468371
Alignment:
Q  21 aggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaa 120  Q
    |||||||| ||||||||| |||||||||||||||| ||  |||||| ||| |||||  ||  |||||||||||||| ||||||||||| ||| ||||| |    
T  22468592 aggtctcaatactacccaagggtccatctctaatcgaattatgcgacacatatcgcaataccctcacttgcactcagttctggaagtgctcgcgaggcga 22468493  T
Q  121 gagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttt 220  Q
    |||||||||||| ||||| |||||||||| |||||||||||| |  ||||||||| ||||| ||  | |||||||| |||||||||||||| ||||||||    
T  22468492 gagcatctgctcttcatgtcgagtacaagccagattcccaactaatgttgttctaagttaaacctggttcaatctctttctaagttatcatttaatcttt 22468393  T
Q  221 attaaacatcttcaggcactca 242  Q
    | ||  ||||||||||||||||    
T  22468392 aataggcatcttcaggcactca 22468371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 21787932 - 21787717
Alignment:
Q  27 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 126  Q
    |||||||||||| |||||||||||||| |||   |||||| |||| ||||      |||||||||||||| ||||| ||||| ||| ||||| |||||||    
T  21787932 cattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaatttctcacttgcactcagttctgaaagtgctcgcgaggcgagagcat 21787833  T
Q  127 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaa 226  Q
    ||||||| |||||||||||| || |||||||||||| |  |||||| || | ||| ||| | ||||||||||||||||||||||| ||||||||||||||    
T  21787832 ctgctcgccatggcgagtacgagccagattcccaactaatgttgttataagctaaaccaggttcaatctcattctaagttatcatataatctttattaaa 21787733  T
Q  227 catcttcaggcactca 242  Q
    |||||| |||||||||    
T  21787732 catctttaggcactca 21787717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 22831275 - 22831053
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| |||| |||  ||||||| |||||||||   |  |||| ||||||||| ||| ||||||| ||| |||||     
T  22831275 taggtcacattactacctaagagtccatccctaaacaagtcatgcgacacagatcgcaacattctcaattgcactcagttcaggaagtgctcgcgaggcg 22831176  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||| |||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  22831175 agagcatctgctcgccatggcgagtacaagccagattctcaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 22831076  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  22831075 taataaacatctttaggcactca 22831053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 6152077 - 6152299
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| ||||||||  ||||||| |||||||||   |  || || |||| ||| ||||||||||| ||| |||||     
T  6152077 taggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgcaacatcctaacatgcattcagttctggaagtgctcgcgaggcg 6152176  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | ||| ||| | ||||||  ||||||||||||||| |||||||    
T  6152177 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaaccaggttcaatcctattctaagttatcatttaatctt 6152276  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  6152277 taataaacatctttaggcactca 6152299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 21022860 - 21023082
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | |||||||||  |||||||| || || | ||||||| ||  |  |||||| | ||| | ||||||||||| ||| |||||     
T  21022860 taggtcacattactacctaagggtccatccttaatcaaatcaagcaacacagatcacgacattctcactagtactgagttctggaagtgctcgcgaggcg 21022959  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||| || |||| ||||||| |  ||||||||| | ||| ||| | ||||||||||||||||| |||||||||||||    
T  21022960 agagcatctgctcgccatggcgagtacgagccagaatcccaactaaggttgttctaagctaaaccaggttcaatctcattctaagtcatcatctaatctt 21023059  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||||||||||  ||||||||    
T  21023060 taataaacatcttttggcactca 21023082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 18182011 - 18181796
Alignment:
Q  27 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 126  Q
    |||||||||| | | ||||||| ||||||||   |||||| |||||||||   |  || ||||||||||| ||||||||||| |||  |||| |||||||    
T  18182011 cattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcaaggcgagagcat 18181912  T
Q  127 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaa 226  Q
    ||||||| ||| ||||||||||| |||| | ||||| | |||||||||| | ||| ||| | |||||| | |||||||| ||||||||||| ||| ||||    
T  18181911 ctgctcgccatagcgagtacaagccagaattccaactaaagttgttctaagctaaaccaggttcaatcccgttctaagtcatcatctaatcattaataaa 18181812  T
Q  227 catcttcaggcactca 242  Q
    |||||| |||||||||    
T  18181811 catctttaggcactca 18181796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 232
Target Start/End: Complemental strand, 3472755 - 3472611
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| |    
T  3472755 ttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccagg 3472656  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatctt 232  Q
     ||||||||||||||| | ||||||||||||||| ||||||||||    
T  3472655 ttcaatctcattctaaatcatcatctaatctttaataaacatctt 3472611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 20091370 - 20091229
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||| |||||||  |||||| |||||||||  ||  |||| ||||||||| ||||||||||| ||| ||||      
T  20091370 taggtctcattactacccaagggtccatctcaaatcaaattatgcgacacagatcgcaatatcctcatttgcactcagttctggaagtgctcgcgaggtg 20091271  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 161  Q
    ||| |||||||||| |||||||||| || |||||| ||||||    
T  20091270 agaacatctgctcgccatggcgagttcaggtcagaatcccaa 20091229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 242
Target Start/End: Complemental strand, 8761460 - 8761308
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagct 189  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||  |||| | |||||||||| | ||||||| | |    
T  8761460 gcactcagttctggaagtgttcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattttcaactaaagttgttctaagctaatccaggtt 8761361  T
Q  190 caatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||||||  |||||| | ||| ||||||||||| || || |||  |||||||||    
T  8761360 caatcttgttctaaatcatcctctaatctttaatacacgtctaaaggcactca 8761308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 22432597 - 22432458
Alignment:
Q  103 gaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattcta 202  Q
    |||||| ||| ||||| | |||||||||||| ||||||||| ||| | |||| ||||||| | |||||||||| | ||| |||   |||||||  |||||    
T  22432597 gaagtgctcgcgaggcgaaagcatctgctcgccatggcgaggacaggccagaatcccaactaaagttgttctaagctaaaccagattcaatcttgttcta 22432498  T
Q  203 agttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| ||||||||||||||| |||||||||| |||||||||    
T  22432497 agtcatcatctaatctttaataaacatctttaggcactca 22432458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 20138364 - 20138450
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||| ||||||||||||||||||||||| |  |||||||| ||||    
T  20138364 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagtcagattcccaactaaggttgttctgggtt 20138450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 36819137 - 36819047
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  36819137 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 36819047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 16080273 - 16080200
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  16080273 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 16080200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 17678416 - 17678326
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  17678416 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 17678326  T

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Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 21305591 - 21305681
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||||||||||| |  ||||||| |||||    
T  21305591 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgttccaggtt 21305681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 33797810 - 33797900
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| || ||||||||| |  ||||||| |||||    
T  33797810 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaattcccaactaaggttgttccaggtt 33797900  T

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Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 12647147 - 12647219
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |||||||    
T  12647147 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 12647219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 20228636 - 20228548
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  20228636 cactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 20228548  T

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Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 18882645 - 18882734
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||||| || | ||||||| |  ||||||| |||||    
T  18882645 gcactcagttcttgaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccaaaatcccaactaaggttgttccaggtt 18882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 46975745 - 46975834
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| ||||||| |  ||||||| |||||    
T  46975745 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagaaagaatcccaactaaggttgttccaggtt 46975834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 16375284 - 16375196
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16375284 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16375196  T

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Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 21407635 - 21407723
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  21407635 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 21407723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 21615718 - 21615774
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  21615718 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 21615774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 52639821 - 52639909
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  52639821 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 52639909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 22449100 - 22449037
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  22449100 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 22449037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 19212144 - 19212234
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| || |||||||| ||| ||||| |||||||||||||| ||||| ||||||||| ||||||| |||| |  ||||||| |||||    
T  19212144 tgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattctcaactaaggttgttccaggtt 19212234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 45489571 - 45489482
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  45489571 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactcgccagatttccaactaaggttgttccaggtt 45489482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 23819126 - 23819063
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  23819126 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 23819063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 24782929 - 24782839
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  24782929 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 24782839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23763489 - 23763578
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  23763489 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 23763578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 45310194 - 45310137
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    ||||||| ||||| ||||| ||| ||||| |||||||||||||| |||||||||||||    
T  45310194 gcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 45310137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 21438081 - 21438161
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  21438081 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 21438161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 48603739 - 48603795
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgc 76  Q
    |||||| || ||||||| ||||||||||||||||||||  ||||| | |||||||||    
T  48603739 taggtcacaatactacctaggggtccatctctaatcaattcatgcaacacagatcgc 48603795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 4e-68; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 21395879 - 21395657
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||| ||| ||| |||||     
T  21395879 taggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcg 21395780  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||| | | ||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  21395779 agagcatctgcttgccttggcgagtacaagccagattcccaacaatggttgttctaagttaacccaggttcaatctcattctaagttatcatataatctt 21395680  T
Q  220 tattaaacatcttcaggcactca 242  Q
    |||||| ||||||||||||||||    
T  21395679 tattaagcatcttcaggcactca 21395657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 21790372 - 21790150
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||| ||| ||| |||||     
T  21790372 taggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcg 21790273  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||| | | ||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  21790272 agagcatctgcttgccttggcgagtacaagccagattcccaacaatggttgttctaagttaacccaggttcaatctcattctaagttatcatataatctt 21790173  T
Q  220 tattaaacatcttcaggcactca 242  Q
    |||||| ||||||||||||||||    
T  21790172 tattaagcatcttcaggcactca 21790150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 22 - 242
Target Start/End: Complemental strand, 21389347 - 21389127
Alignment:
Q  22 ggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaag 121  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||||||| ||| || || ||    
T  21389347 ggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaagcgag 21389248  T
Q  122 agcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    |||||||||||  | ||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||||    
T  21389247 agcatctgctcaccttggcgagtacaagccagattcccaacaatggttgttctaagttaaaccaggttcaatctcattctaagttatcatataatcttta 21389148  T
Q  222 ttaaacatcttcaggcactca 242  Q
    |||| ||||||||||||||||    
T  21389147 ttaagcatcttcaggcactca 21389127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 19899317 - 19899539
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  19899317 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 19899416  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  19899417 agagcatctgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 19899516  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  19899517 taataaacatctttaggcactca 19899539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 16184950 - 16185172
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| |||| ||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  16184950 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggtcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 16185049  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||| |||| | |||||||||| |  || ||| | ||||||||||||||||||||||| |||||||    
T  16185050 agagcatctgctcgccatggcgagtacaagccagattctcaactaaagttgttctaagccaaaccaggttcaatctcattctaagttatcatttaatctt 16185149  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  16185150 taataaacatctttaggcactca 16185172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 17353834 - 17353612
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||| ||  |||||| ||| |||||  ||  |||||||||||||| ||||| ||||| ||| |||||     
T  17353834 taggtctcattactacccaagggtccatctctaatcgaattatgcgacacaaatcgcaatatcctcacttgcactcagttctgcaagtgctcgcgaggcg 17353735  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||| | | | |||||||| ||| |||||||||| |||||||    
T  17353734 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaagctgttctaggttaaactaggttcaatctcgttcaaagttatcatttaatctt 17353635  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||  |||||||||| |||||    
T  17353634 taataggcatcttcagggactca 17353612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 19976667 - 19976889
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| |||| ||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  19976667 taggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 19976766  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||| |||||||| ||||||||||||||| |  ||||||||| | ||| ||| | |||||| |||||||||||||||| ||||| |    
T  19976767 agagcatctgctcgccattgcgagtactagtcagattcccaactaatgttgttctaagctaaaccaggttcaatcccattctaagttatcatttaatcat 19976866  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  19976867 taataaacatctttaggcactca 19976889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 28 - 242
Target Start/End: Complemental strand, 21168610 - 21168396
Alignment:
Q  28 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatc 127  Q
    |||||||||||  ||||||||||||||||||  |||||| |||||||||   |  ||||||||||||||  || ||||||| | | ||||| ||||||||    
T  21168610 attactacccaaaggtccatctctaatcaaactatgcgacacagatcgcaacatcctcacttgcactcagatcaggaagtgcttgcgaggcgagagcatc 21168511  T
Q  128 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 227  Q
    |||||| ||||||||||||||| |||||||||||| | |||||||| | | ||| ||| | ||||||||||||||||||||||||||||||||| |||||    
T  21168510 tgctcgccatggcgagtacaagccagattcccaactaaagttgttcaaagctaaaccaggttcaatctcattctaagttatcatctaatctttaataaac 21168411  T
Q  228 atcttcaggcactca 242  Q
    ||||| |||||||||    
T  21168410 atctttaggcactca 21168396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 19983315 - 19983537
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||||||||||||| ||||||||||||||||  |||||| |||||||||   |  |||| ||||||||| || |||||||| ||| |||||     
T  19983315 taggtcacattactacccagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcatttgcactcagttttggaagtgctcgcgaggcg 19983414  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||  |||||||||||| ||||||||||||||| |  ||||||||| | ||| ||| | |||||| |||||||||||||||| ||||| |    
T  19983415 agagcatctgctcaccatggcgagtactagtcagattcccaactaatgttgttctaagctaaaccaggttcaatcccattctaagttatcatttaatcat 19983514  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  19983515 taataaacatctttaggcactca 19983537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 24755943 - 24756165
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||| |||   |||||| |||| ||||      |||||||||||||| ||||||||||| ||| |||||     
T  24755943 taggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcacttgcactcagttctggaagtgctcgcgaggcg 24756042  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  24756043 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 24756142  T
Q  220 tattaaacatcttcaggcactca 242  Q
    |||| || ||||| |||||||||    
T  24756143 tatttaatatctttaggcactca 24756165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 30643188 - 30642966
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||    ||||| |||||||||   |  || ||||||| ||||||||||||||| ||| ||||||    
T  30643188 taggtcacattactacctaagggtccaaccctaatcaatttgtgcgaaacagatcgcaacatcctaacttgcattcaattctggaagtgctcgcgaggca 30643089  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||  |||| | |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  30643088 agagcatctgctcgccatggcgagtacaagccagattttcaactaaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 30642989  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  30642988 taataaacatctttaggcactca 30642966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 22010513 - 22010354
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||   |||||||||| | |||     
T  22010513 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaa 22010414  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | |||||||| |||||| | |||||||||||||||||||||||||| |||||||||    
T  22010413 ccaggttcaatctcgttctaaatcatcatctaatctttattaaacatcttaaggcactca 22010354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 23776732 - 23776509
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagat-cgcgttaaactcacttgcactcaattctggaagtggtcgagaggc 118  Q
    |||||| |||||||||| | | |||||||||||| ||||  |||||| |||||| |||  ||  ||  |||||||||| ||||| ||||| ||| |||||    
T  23776732 taggtcacattactacctaagtgtccatctctaaccaaattatgcgacacagattcgcaatatcctagcttgcactcagttctgaaagtgctcgcgaggc 23776633  T
Q  119 aagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatct 218  Q
     ||||||||||||||  || ||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||||||||||||||||| ||||||    
T  23776632 gagagcatctgctcgcgatagcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatct 23776533  T
Q  219 ttattaaacatcttcaggcactca 242  Q
    ||| ||| |||||| |||||||||    
T  23776532 ttaataatcatctttaggcactca 23776509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 20465873 - 20465714
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| ||||||| | || ||||||| | |||     
T  20465873 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagaatcccaactaaagctgttctaagctaaa 20465774  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | |||||||| |||||||| ||||||||||||||| | |||||||| |||||||||    
T  20465773 ccaggttcaatctcgttctaagtcatcatctaatctttaattaacatcttaaggcactca 20465714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 377500 - 377722
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||||| ||||||||  || || | ||||||| ||  |  |||| | ||||||| ||||||||||| ||| ||| |     
T  377500 taggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatcacgacattctcattagcactcagttctggaagtgctcgcgagacg 377599  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| | |||| ||||| | ||| ||| | |||||||||||||||||||| || |||||||    
T  377600 agagcatctgctcgccatggcgagtacaagccagaattccaactaaagttattctaagctaaaccaggttcaatctcattctaagttataatttaatctt 377699  T
Q  220 tattaaacatcttcaggcactca 242  Q
    ||  ||||||||| |||||||||    
T  377700 taacaaacatcttaaggcactca 377722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 86 - 242
Target Start/End: Complemental strand, 19259432 - 19259276
Alignment:
Q  86 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 185  Q
    ||||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||| |||||| |||| | ||||| |  ||||||||| | ||| |||    
T  19259432 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgaatacaagccagaattccaactaaggttgttctaagctaaacca 19259333  T
Q  186 agctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
     | | ||||||||||||||| ||||| ||||||||| |||||||||| |||||||||    
T  19259332 ggtttaatctcattctaagtcatcatttaatctttaataaacatctttaggcactca 19259276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 15602914 - 15602692
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||  | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| | | ||||||||||| ||| |||||     
T  15602914 taggtcacattactacttaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattaagttctggaagtgctcgcgaggcg 15602815  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||  |||||| | |||||||||||||    
T  15602814 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatcttgttctaaatcatcatctaatctt 15602715  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  15602714 taataaacatcttaaggcactca 15602692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 15611366 - 15611144
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||  | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| | | ||||||||||| ||| |||||     
T  15611366 taggtcacattactacttaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattaagttctggaagtgctcgcgaggcg 15611267  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||  |||||| | |||||||||||||    
T  15611266 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatcttgttctaaatcatcatctaatctt 15611167  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  15611166 taataaacatcttaaggcactca 15611144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 17926604 - 17926382
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| | ||||| ||| |||||| |||| ||| |||||     
T  17926604 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaatttgcattcagttctgggagtgctcgcgaggcg 17926505  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  17926504 agagcatctgctcgccatggcgagtacaagccataattccaacttaagttgttctaagataaaccaggttcaatctcgttctaaatcatcatctaatctt 17926405  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  17926404 taataaacatcttaaggcactca 17926382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 242
Target Start/End: Complemental strand, 16410052 - 16409930
Alignment:
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||| |||| |||| | ||||| | |||| ||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  16410052 agagcatctgctcgccatggcgagttcaagccagaattccaactaaagttattctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 16409953  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  16409952 taataaacatcttaaggcactca 16409930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 23846842 - 23846771
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  23846842 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 23846771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 15532166 - 15532255
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  15532166 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcggcatggcgagtacaagccagaatcccaactaaggttgttctaggtt 15532255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 24434065 - 24433976
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  24434065 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttctaggtt 24433976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 22113555 - 22113467
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  22113555 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 22113467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 22135058 - 22134970
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  22135058 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 22134970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 15538726 - 15538815
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  15538726 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 15538815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 21161947 - 21161842
Alignment:
Q  28 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatc 127  Q
    |||||||||||  ||||||||||||||||||  || ||| |||||||||   |  |||||||||||||| ||||||||||| ||| ||||| ||||||||    
T  21161947 attactacccaaaggtccatctctaatcaaactatacgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatc 21161848  T
Q  128 tgctcg 133  Q
    ||||||    
T  21161847 tgctcg 21161842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 242
Target Start/End: Complemental strand, 20856252 - 20856100
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagct 189  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |  |||| |  ||||||||| | ||| ||| | |    
T  20856252 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattgcaactaaggttgttctaagctaaaccaggtt 20856153  T
Q  190 caatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||||||  || ||| | ||||||||||||||| |  ||||||  |||||||||    
T  20856152 caatcttgttttaaatcatcatctaatctttaatggacatctaaaggcactca 20856100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 22166208 - 22166120
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| | | ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  22166208 cactcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 22166120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 16231304 - 16231214
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| ||||||| |||| |  ||||||| |||||    
T  16231304 tgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatggcgagtacaagccagattctcaactaaggttgttccaggtt 16231214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 242
Target Start/End: Complemental strand, 16861155 - 16861012
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 188  Q
    |||||||| ||||||||||| ||| ||||| ||||||||| |||| |||||||||||||||  ||| | |||| |||          ||||| |||| |     
T  16861155 tgcactcagttctggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagcaagaattccaaaaat----------ggttattccaggt 16861066  T
Q  189 tcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    |||||||  |||||||| ||||||||||||||| |||||||||| |||||||||    
T  16861065 tcaatcttgttctaagtcatcatctaatctttaataaacatcttaaggcactca 16861012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 22028834 - 22028924
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||| | |||||||||||| || |||||||||||| |  ||||||| |||||    
T  22028834 tgcactcagttctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtactagccagattcccaactaaggttgttccaggtt 22028924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 23834450 - 23834540
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||| ||||||||||| ||||||| |||| |  ||||||| |||||    
T  23834450 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatcgcgagtacaagccagattctcaactaaggttgttccaggtt 23834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 17828411 - 17828347
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||    
T  17828411 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 17828347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 43252092 - 43252180
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  43252092 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 43252180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 21161837 - 21161790
Alignment:
Q  195 tcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  21161837 tcattctaagttatcatctaatctttaataaacatctttaggcactca 21161790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 17055214 - 17055128
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||||||| |||||| ||  || ||||| |  |||||||||||||    
T  17055214 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgactacaagccaactttccaactaaggttgttctaggtt 17055128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 22045145 - 22045225
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||||||||||||| |||| | |||||||| |||||||||||| |  ||||||| |||||    
T  22045145 tctggaagtgctcgcgaggcgagagcatctgctcgccatgacaagtacaagccagattcccaactaaggttgttccaggtt 22045225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 32598959 - 32599015
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| |||  |||| |||||||||||||| |||||||||||||||    
T  32598959 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaag 32599015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 32605491 - 32605547
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| |||  |||| |||||||||||||| |||||||||||||||    
T  32605491 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaag 32605547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 39094769 - 39094713
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  39094769 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 39094713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 18619756 - 18619845
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| |||| |||||||||| |||| | ||||  |  |||||||||||||    
T  18619756 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgacgagtacaagccagaattccaagtaaggttgttctaggtt 18619845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 20527727 - 20527816
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  20527727 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 20527816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 30308582 - 30308493
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||  ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  30308582 gcactcagttctggaagtgctcgcgaggcgagagcattagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 30308493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 21972411 - 21972355
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    |||||||||||||||||| ||| | ||| |||||||||||||| | |||||||||||    
T  21972411 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtaca 21972355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 21976496 - 21976440
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    |||||||||||||||||| ||| | ||| |||||||||||||| | |||||||||||    
T  21976496 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtaca 21976440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 22875385 - 22875432
Alignment:
Q  114 gaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaa 161  Q
    ||||| ||||| ||||||||||||||||||| || |||||||||||||    
T  22875385 gaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaa 22875432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 16412064 - 16411944
Alignment:
Q  122 agcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    |||||||||||| |||||||||| |||| |||| | ||| | |  ||||||||| | ||| | | | ||||||| || |||  ||||||| |||||||||    
T  16412064 agcatctgctcgccatggcgagttcaagccagaattccacctaaggttgttctaagctaaactaggttcaatctgatcctacattatcatttaatcttta 16411965  T
Q  222 ttaaacatcttcaggcactca 242  Q
     || ||||||| |||||||||    
T  16411964 atacacatcttaaggcactca 16411944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 19278110 - 19278023
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||| ||||| ||| ||||| |||||||||||||| | |||| |||||||| ||  || ||||| |  |||||||||||||    
T  19278110 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggc-agtacaagccaactttccaactaaggttgttctaggtt 19278023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 127; Significance: 1e-65; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 70018 - 70240
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  70018 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 70117  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  | ||||||||||||| ||| | |||||||| |||||||||||||| |||||||    
T  70118 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggctgttctaggttaaaccaggttcaatctcgttctaagttatcatttaatctt 70217  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || || |||||||||||||||||    
T  70218 taatatacatcttcaggcactca 70240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 10413 - 10323
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  10413 tgcactcatttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 10323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 58246 - 58157
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  58246 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 58157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 7e-64; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 23 - 242
Target Start/End: Original strand, 26704291 - 26704510
Alignment:
Q  23 gtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaaga 122  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||| ||||||| | ||   || ||||||||||| ||||||||||| ||| ||||| | |    
T  26704291 gtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttacttgcactcagttctggaagtgctcgcgaggcgaaa 26704390  T
Q  123 gcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttat 222  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||     
T  26704391 gcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaa 26704490  T
Q  223 taaacatcttcaggcactca 242  Q
    ||| ||||||||||||||||    
T  26704491 taagcatcttcaggcactca 26704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 23 - 242
Target Start/End: Original strand, 26974024 - 26974243
Alignment:
Q  23 gtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaaga 122  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||| ||||||| | ||   || ||||||||||| ||||||||||| ||| ||||| | |    
T  26974024 gtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttacttgcactcagttctggaagtgctcgcgaggcgaaa 26974123  T
Q  123 gcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttat 222  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||     
T  26974124 gcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaa 26974223  T
Q  223 taaacatcttcaggcactca 242  Q
    ||| ||||||||||||||||    
T  26974224 taagcatcttcaggcactca 26974243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 37724126 - 37724348
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||| ||||||| | |||||||||||||||||||  |||||| |||||||||  |   |||||||||||||| ||||||||||| ||| |||||     
T  37724126 taggtctcaatactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatctcctcacttgcactcagttctggaagtgctcgcgaggcg 37724225  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||| || ||||||||||||||  ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  37724226 agagcatctgctcgccatggcgagtaccagccagattcccaacaaatgttgttctaagttaaaccaggttcaatctcattctaagttatcatttaatctt 37724325  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||  ||||||||||||||||    
T  37724326 taataggcatcttcaggcactca 37724348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 14079370 - 14079592
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| |||| |||||| ||| |||||     
T  14079370 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctagaagtgctcgcgaggcg 14079469  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||| |||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| ||| | |||||||||||||||||||||||  |||| |    
T  14079470 agagcatttgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcattaaatcat 14079569  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || | ||||| || |||||||||    
T  14079570 taattaacatatttaggcactca 14079592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 22032538 - 22032760
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||||||||||||  || || | ||| ||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  22032538 taggtctcattactacctaagggtccatctctaatcaattcaagcaacacatatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 22032637  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  22032638 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 22032737  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  22032738 taataaacatctttaggcactca 22032760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 30 - 242
Target Start/End: Original strand, 23512339 - 23512551
Alignment:
Q  30 tactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctg 129  Q
    ||||||||| ||||||| |||||||||||  |||||| |||||||||   |  || || |||||||| ||||||||||| ||| ||||| ||||||||||    
T  23512339 tactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacatcctaacatgcactcagttctggaagtgctcgcgaggcgagagcatctg 23512438  T
Q  130 ctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacat 229  Q
    |||| ||||||||||||||| ||||||  |||| | |||||||||| | ||| ||| | ||||||||| ||||||| ||||||||||||||| |||||||    
T  23512439 ctcgccatggcgagtacaagccagattttcaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataaacat 23512538  T
Q  230 cttcaggcactca 242  Q
    ||| |||||||||    
T  23512539 ctttaggcactca 23512551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 23201590 - 23201813
Alignment:
Q  20 taggtctcattactaccc-aggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggc 118  Q
    |||||||||||||||||| | |||||||||||||| ||||  |||||| |||||||||  ||  |||||||||||||| ||||  ||||| ||| |||||    
T  23201590 taggtctcattactaccccaagggtccatctctaaacaaattatgcgacacagatcgcaatatcctcacttgcactcagttctaaaagtgctcgcgaggc 23201689  T
Q  119 aagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatct 218  Q
     |||||||||||||| ||||||||||||| | |||||||||||| |  |||||| || | ||| ||| | ||||||||||| ||||||||||| ||||||    
T  23201690 gagagcatctgctcgccatggcgagtacaggccagattcccaactaatgttgttataagctaaaccaggttcaatctcattataagttatcatttaatct 23201789  T
Q  219 ttattaaacatcttcaggcactca 242  Q
    ||| ||  ||||||||||||||||    
T  23201790 ttaataggcatcttcaggcactca 23201813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 23501242 - 23501020
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||||||||||   || ||| |||||||||   |  ||||||| |||||| ||||||||||| ||| ||||      
T  23501242 taggtctcattactacccaagggtccatctctaatcaacttatacgacacagatcgcaacattctcactttcactcagttctggaagtgctcgcgaggtg 23501143  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||||||  ||||||||||| |  ||||||||| | ||| ||| | ||||||||  |||||| |||||| |||| ||    
T  23501142 agagcatctgctcgccatggcgagtacaagcaagattcccaactaatgttgttctaagctaaaccaggttcaatctcggtctaagctatcatttaatatt 23501043  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||| ||||||||||||||||    
T  23501042 taataagcatcttcaggcactca 23501020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 18769901 - 18769679
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | ||||||| |   |  ||||||||| |||| ||||||||||| ||| || ||     
T  18769901 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcactacattctcacttgcgctcagttctggaagtgctcgcgacgcg 18769802  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| ||| ||| | | |||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  18769801 agagcatctgctcgccacggcgagtacaagccagaatcctaactaaaattgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 18769702  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  18769701 taataaacatctttaggcactca 18769679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 21366563 - 21366341
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  21366563 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 21366464  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | |||  || | |||||||| |||||| | |||||||||||||    
T  21366463 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaatcaggttcaatctcgttctaaatcatcatctaatctt 21366364  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  21366363 taataaacatcttaaggcactca 21366341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 98 - 242
Target Start/End: Original strand, 21887124 - 21887268
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctca 197  Q
    ||||| ||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | |||  || | ||| |||||    
T  21887124 ttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaagcaggttcattctca 21887223  T
Q  198 ttctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||    
T  21887224 ttctaagttatcatttaatctttaataaacatctttaggcactca 21887268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 23572364 - 23572502
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| |||||||||||  || ||||| |||||||||||||| ||||| ||||||||| |||| ||||||| | |||||||||| | |||     
T  23572364 ctcacttgcactcagttctggaagtgcgcgcgaggcgagagcatctgctcgccatggggagtacaagccagaatcccaactaaagttgttctaagctaaa 23572463  T
Q  183 ccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    ||| | ||||||||||||||||||||||| |||||||||    
T  23572464 ccaggttcaatctcattctaagttatcatttaatcttta 23572502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 20805837 - 20805991
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||   |||||||||| | ||| ||| |    
T  20805837 ttgcattcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaaccagg 20805936  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
     |||||||| |||||| | ||||||||||||||| |||||||||| |||||||||    
T  20805937 ttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactca 20805991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 23535418 - 23535328
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |  ||||||| |||||    
T  23535418 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagtcagattcccaactaaggttgttccaggtt 23535328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 21873471 - 21873595
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||| ||||||||||||||  |||||| ||||||| |  ||  || ||||||||||| ||||| ||||| ||| |||||     
T  21873471 taggtcacattactacccaagggttcatctctaatcaaattatgcgacacagatctcaatatcctaacttgcactcagttctgtaagtgctcgcgaggcg 21873570  T
Q  120 agagcatctgctcgtcatggcgagt 144  Q
    |||||||||||||| ||||||||||    
T  21873571 agagcatctgctcgccatggcgagt 21873595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 17410724 - 17410814
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  17410724 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 17410814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 20910629 - 20910539
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  20910629 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 20910539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 18356604 - 18356677
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  18356604 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 18356677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 21885016 - 21884928
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  21885016 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 21884928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 242
Target Start/End: Original strand, 31342403 - 31342547
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctca 197  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||||||| ||   |||||  ||||| |  ||||||||| | ||| ||| | |||||||||    
T  31342403 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagttcagcccagatctccaactaaggttgttctaagctaagccaggttcaatctca 31342502  T
Q  198 ttctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||||| |||||||| |||||||   |||||||||| |||||||||    
T  31342503 ttctaggttatcatttaatcttctataaacatcttaaggcactca 31342547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 21340595 - 21340506
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  21340595 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 21340506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 26665959 - 26665870
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  26665959 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 26665870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 26937556 - 26937467
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  26937556 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 26937467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 19472546 - 19472458
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||| || ||||| |  |||||||||||||    
T  19472546 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccagctttccaactaaggttgttctaggtt 19472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 26172743 - 26172811
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattccc 159  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||    
T  26172743 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttccc 26172811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 1858805 - 1858746
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaa 148  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  1858805 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaa 1858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 23451634 - 23451724
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| | | ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  23451634 tgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 23451724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 23463139 - 23463229
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| | | ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  23463139 tgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 23463229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 123133 - 123076
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||    
T  123133 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 123076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 16674430 - 16674519
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| ||||||| |  ||||||| |||||    
T  16674430 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatcccaactaaggttgttccaggtt 16674519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 20232828 - 20232917
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||| ||| |  ||||||| |||||    
T  20232828 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcctaactaaggttgttccaggtt 20232917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 17918979 - 17918907
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || |||||    
T  17918979 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaac 17918907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 20296127 - 20296215
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  20296127 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 20296215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 23458878 - 23458968
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||| |||||| | | ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  23458878 tgcactcagttcttgaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 23458968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 12028393 - 12028304
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  12028393 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 12028304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 17718259 - 17718182
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttcta 175  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| ||||||| |  |||||||||    
T  17718259 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaactaaggttgttcta 17718182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 24222174 - 24222255
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || ||||||| |||||    
T  24222174 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttccaggtt 24222255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 24532876 - 24532787
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||  ||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  24532876 gcactcagttctaaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 24532787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 18774490 - 18774554
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| |||||||    
T  18774490 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaac 18774554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 26742574 - 26742502
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||| || |||||| ||||| |||||||| ||||| ||||||||||||||| |||||| |||||    
T  26742574 gcactcagttctgaaaatggtcgcgaggcgagagcatcagctcgccatggcgagtacaagccagatttccaac 26742502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 42805698 - 42805762
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||| |||||||||| ||||    
T  42805698 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagccaga 42805762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 25229233 - 25229170
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  25229233 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 25229170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 25293389 - 25293326
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  25293389 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 25293326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 21295091 - 21295002
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  21295091 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 21295002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 25535266 - 25535355
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  25535266 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 25535355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 26680868 - 26680957
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||||| |||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  26680868 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 26680957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 26952475 - 26952564
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||||| |||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  26952475 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 26952564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 18784336 - 18784397
Alignment:
Q  101 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||| ||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| |||||||    
T  18784336 tggacgtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaac 18784397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 48357 - 48135
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| || |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  48357 taggtctcattactacccaagggtccatctctaatcaaattatgtgacacagatcgcaatattcttacttgcactcagttctggaagtgctcgcgaggcg 48258  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||    
T  48257 agagcatctgctcgccatggcgagtacaagccagattcctaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctt 48158  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || || |||||||||| ||||||    
T  48157 taatatacatcttcagacactca 48135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 23038257 - 23038479
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||| |||||||||  |   |||||||||||||| ||||||||||| ||  |||||     
T  23038257 taggtctcaatactacccaagggtccatctctaatcaaatcatgcgacacagatcgcaatttcctcacttgcactcagttctggaagtgctcacgaggcg 23038356  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||| |||||||||| |||| ||| | ||||||||||||||||||||||| |||||||    
T  23038357 agagcatctgctcgccatggcgggtacaagccagattcccaacaatggttgttctagcttaaaccaggttcaatctcattctaagttatcatttaatctt 23038456  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||| ||||||||||||||||    
T  23038457 taataagcatcttcaggcactca 23038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 22740857 - 22740635
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  22740857 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 22740758  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| | |||||||| |||| ||||||||||||||  ||||||||| ||||| | | | |||||||| |||||||||||||| |||||||    
T  22740757 agagcatctgctcgccgtggcgagttcaagccagattcccaacaaaggttgttctatgttaaactaggttcaatctcgttctaagttatcatttaatctt 22740658  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || || |||||||||||||||||    
T  22740657 taatatacatcttcaggcactca 22740635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 22799023 - 22798801
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||  ||  || ||||||||| | ||||||||||| ||| |||||     
T  22799023 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcacttagttctggaagtgctcgcgaggcg 22798924  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | || ||||||| | ||| ||| | |||||||| ||||||||||||||||||||||    
T  22798923 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagctgttctaagctaaaccaggttcaatctcgttctaagttatcatctaatctt 22798824  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  22798823 taataaacatctttaggcactca 22798801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 22758612 - 22758390
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||| ||||| ||  |||||     
T  22758612 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcg 22758513  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| | | | | || ||  |||||||||||||| |||||||    
T  22758512 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaactaggttgaagcttgttctaagttatcatgtaatctt 22758413  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || || |||||||||||||||||    
T  22758412 taatatacatcttcaggcactca 22758390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 40622105 - 40621904
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  40622105 taggtctcattactacccaagggtccatctctaaacaaaatatgcgaaacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 40622006  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| | |||||||||| | ||  ||| | |||||||| |||||||||||||| |||||||    
T  40622005 agagcatctgctcgccatggcgagtacaagccagaattccaactaaagttgttctaagctataccaggttcaatctcgttctaagttatcatttaatctt 40621906  T
Q  220 ta 221  Q
    ||    
T  40621905 ta 40621904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 23019603 - 23019381
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| ||||||| ||||||| |||  |||||| |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  23019603 taggtcacattactacccaagggtccaactctaattaaattatgcgacacagatcgcaatatcctgacttgcactcagttctggaagtgctcgcgaggcg 23019504  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||||| |||| |||||| |||||||| |||||||||||| | ||||||||||   ||  ||| | ||||||||| ||||||| |||||||||||||    
T  23019503 agagcatctactcgccatggcaagtacaagccagattcccaactaaagttgttctaacctagaccaggttcaatctcactctaagtcatcatctaatctt 23019404  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  23019403 taataaacatctttaggcactca 23019381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 23101092 - 23100907
Alignment:
Q  55 caaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||| ||||||| | ||||||| |||  |||||||||||||| || |||||||| ||| ||||| |||||||||||||| |||||||| ||||||  |||    
T  23101092 caaatcatgcgacatagatcgcattatcctcacttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagctaga 23100993  T
Q  155 ttcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcact 240  Q
    ||||||||| | ||||||||||||||| ||| | ||||||||||||||||||||||| |||| |||| ||| ||||||||||||||    
T  23100992 ttcccaacagtggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatttttaataagcatcttcaggcact 23100907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 45678052 - 45677830
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| ||||||||  ||||||| ||||||| |   |  |||| ||||||||| ||||||||||| ||  |||||     
T  45678052 taggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatcacaacattctcaattgcactcagttctggaagtgctcacgaggcg 45677953  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  45677952 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 45677853  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||| |||||| |||||||||    
T  45677852 taataatcatctttaggcactca 45677830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 25963614 - 25963392
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   ||| || |||||||||   | ||| ||||||| ||||||||||||||| ||| |||||     
T  25963614 taggtcacattactacctaagggtccaaccctaatcaacttatgagaaacagatcgcaacatactaacttgcattcaattctggaagtgctcgcgaggcg 25963515  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  25963514 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 25963415  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  25963414 taataaacatcttaaggcactca 25963392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 37524886 - 37525108
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| |  |||||||   ||| || |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  37524886 taggtcacattactacctaagggtccaaccttaatcaacttatgtgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 37524985  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  37524986 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 37525085  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  37525086 taataaacatcttaaggcactca 37525108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 21918213 - 21917991
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| |  |||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  21918213 taggtcacattactacctaagggtccaaccataatcaatttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 21918114  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| |  ||||||| | | ||| ||| | |||||||  |||||||| |||||||||||||    
T  21918113 agagcatctgctcgccatggcgagtacaagccagaattccaactaaggttgttcaaagctaaaccaggttcaatctagttctaagtcatcatctaatctt 21918014  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  21918013 taataaacatcttaaggcactca 21917991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 86 - 240
Target Start/End: Original strand, 24673864 - 24674018
Alignment:
Q  86 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 185  Q
    ||||||| ||| || |||||||| ||| ||||| |||||||||||||| |||||||| |||||| |||||||||||| |  ||||||||| | ||| |||    
T  24673864 acttgcattcagttgtggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagccagattcccaactaatgttgttctaagctaaacca 24673963  T
Q  186 agctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcact 240  Q
     | |||||||||||||| |||||||| ||||||| | |||||||||| |||||||    
T  24673964 ggttcaatctcattctaggttatcatttaatcttcaataaacatcttaaggcact 24674018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 15477883 - 15477971
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |   ||||||||||||    
T  15477883 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaagattgttctaggtt 15477971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 19928329 - 19928261
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattccc 159  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||    
T  19928329 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccc 19928261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 22461018 - 22460929
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  22461018 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 22460929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 22811713 - 22811609
Alignment:
Q  138 ggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggc 237  Q
    |||||||||||| |||| ||||||| |  ||||||||| | ||| ||| | |||||||| |||||| | ||||||||||||||| |||||||||| ||||    
T  22811713 ggcgagtacaagccagaatcccaactaaggttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggc 22811614  T
Q  238 actca 242  Q
    |||||    
T  22811613 actca 22811609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 19688585 - 19688495
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| || || |||||||||||| ||||||||||||||||| |||||| ||||| |  ||||||| |||||    
T  19688585 tgcactcagttctggaagtgctcgcgatgcgagagcatctgcttgtcatggcgagtacaagccagatttccaactaaggttgttccaggtt 19688495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 24735680 - 24735770
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||| ||| ||||||||||| ||| ||||| |||||||||||||  ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  24735680 tgcaatcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattcccaactaaggttgttccaggtt 24735770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 12901339 - 12901251
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12901339 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12901251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 24649636 - 24649724
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  24649636 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 24649724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 27379259 - 27379171
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  27379259 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 27379171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 27383305 - 27383217
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  27383305 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 27383217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 44370133 - 44369974
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| |||| |||||| | | ||||| |||||||||||||| |||||| |||||||| |||| | | | | |  ||||||||| | |||     
T  44370133 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagccagaattcaacctaatgttgttctaagctaaa 44370034  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | |||||||  |||||| | || |||||||||||| ||  ||||||||||||||||    
T  44370033 ccaggttcaatcttgttctaaatcattatctaatctttaatatgcatcttcaggcactca 44369974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 27602076 - 27602134
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  27602076 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 27602134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 18855289 - 18855200
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||  ||||| ||||||| |||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  18855289 gcactcagttctggaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagccagaattccaactaaggttgttctaggtt 18855200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23187353 - 23187442
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||| ||| |||| | ||||| |  |||||||||||||    
T  23187353 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagccagaattccaactaaggttgttctaggtt 23187442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23598616 - 23598705
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||| ||| |||| | ||||| |  |||||||||||||    
T  23598616 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagccagaattccaactaaggttgttctaggtt 23598705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 24655158 - 24655077
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || ||||||| |||||    
T  24655158 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttccaggtt 24655077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 24870177 - 24870258
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||  ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || |||||||||||||    
T  24870177 ttctggaagtgctcatgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttctaggtt 24870258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 24628305 - 24628217
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||| ||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  24628305 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 24628217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 24658032 - 24658084
Alignment:
Q  190 caatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    |||||||||||||||||||||| ||||| ||| |||||||||| |||||||||    
T  24658032 caatctcattctaagttatcatttaatcattaataaacatctttaggcactca 24658084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 24716345 - 24716216
Alignment:
Q  103 gaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattcta 202  Q
    |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||||          | ||||| |||| | |||||||| || ||    
T  24716345 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaaca----------ttggttattccaggttcaatctcgtttta 24716256  T
Q  203 agttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| ||| ||||||||||| |||||||||| |||||||||    
T  24716255 agtcatcctctaatctttaataaacatcttaaggcactca 24716216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 26125484 - 26125540
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| | | ||||| |||||||||||||| |||||||||||||||    
T  26125484 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaag 26125540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 41530836 - 41530780
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||    
T  41530836 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtaca 41530780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 41667230 - 41667286
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| | | ||||| |||||||||||||| |||||||||||||||    
T  41667230 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaag 41667286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 24175097 - 24175178
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  24175097 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 24175178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 61094 - 61182
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| |||||  ||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  61094 cactcagttctggaagtgctcgcgaggcgggagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 61182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 25961354 - 25961306
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  25961354 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 25961306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 21327393 - 21327330
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||| |||||| |||| ||| ||||| || ||||||||||| ||||||||||||||| ||||    
T  21327393 cactcagttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagccaga 21327330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 23103293 - 23103255
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaa 58  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  23103293 taggtctcattactaccaaagggtccatctctaatcaaa 23103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 21318455 - 21318399
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||| |||| ||| ||||| || ||||||||||| ||||||||||||||| ||||    
T  21318455 ttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagccaga 21318399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 40428762 - 40428810
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||| |||||    
T  40428762 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtac 40428810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 20205 - 20427
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||||||| ||||||  | |||  |||||||||||||| ||||||||||| ||| |||||     
T  20205 taggtctcattactacccaagggtccatccctaatcaaatcatgcgacacagattacattatcctcacttgcactcagttctggaagtgctcgcgaggcg 20304  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||    
T  20305 agagcatctgctcgccatgacgagtacaactcagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctt 20404  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||  ||||| ||||||||||    
T  20405 taataggcatctccaggcactca 20427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 36680 - 36902
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||| ||||||| |||| ||||||| ||||||||  ||   |||||||||||||| |||| |||||| ||| |||||     
T  36680 taggtctcattactacccaagggtccttctctaaacaaatcatgcgacacagatcgtattttcctcacttgcactcagttctagaagtgctcgcgaggcg 36779  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  36780 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaagttaaaccaggttcaatctcattctaagttatcatataatctt 36879  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||| ||||||||||||||||    
T  36880 taataagcatcttcaggcactca 36902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 6e-61; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 15877725 - 15877503
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| || ||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  15877725 taggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 15877626  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| ||| | |||||||| | |||||||||||| |||||||    
T  15877625 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcgtcctaagttatcatttaatctt 15877526  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||  ||||||||||||||||    
T  15877525 taataggcatcttcaggcactca 15877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 242
Target Start/End: Original strand, 23408664 - 23408876
Alignment:
Q  30 tactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctg 129  Q
    ||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||| | ||||||||||| ||| ||||| ||||||||||    
T  23408664 tactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactaagttctggaagtgctcgcgaggcgagagcatctg 23408763  T
Q  130 ctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacat 229  Q
    |||| |||||||||||||||  |||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||| ||  |||    
T  23408764 ctcgccatggcgagtacaagcaagattcccaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaataggcat 23408863  T
Q  230 cttcaggcactca 242  Q
    |||||||||||||    
T  23408864 cttcaggcactca 23408876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 15060513 - 15060735
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| || ||||||| | ||||||||| ||||||||  ||||||| |||||||||   |  || ||||||| ||| | ||||||||| ||| |||||     
T  15060513 taggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacatcctaacttgcaatcagtcctggaagtgctcgcgaggcg 15060612  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  15060613 agagcatctgctcgccatggcgagtacaagccagaattccaactaaggttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 15060712  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  15060713 taataaacatctttaggcactca 15060735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 242
Target Start/End: Original strand, 12173073 - 12173229
Alignment:
Q  86 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 185  Q
    ||||||| ||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| | |||||||||| | ||| |||    
T  12173073 acttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaataccaactaaagttgttctaagctaaacca 12173172  T
Q  186 agctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
     | ||||||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  12173173 ggttcaatctcattctaagtcatcatctaatctttaataaacatctttaggcactca 12173229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 16369692 - 16369851
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||||||||| ||| ||||| | |||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | |||     
T  16369692 ctcacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaa 16369791  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | ||||||| ||||||||||||||| ||||||||| |||||||||| | |||||||    
T  16369792 ccaggttcaatcttattctaagttatcatttaatctttaataaacatctttatgcactca 16369851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 856357 - 856579
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  856357 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 856456  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||  ||||||||||| |||| | ||||| | | |||||||| | |||  || | ||||||||||||||||||||||| |||||||    
T  856457 agagcatctgctcgccaaagcgagtacaagccagaataccaactaaaattgttctaagctaaaacaggttcaatctcattctaagttatcatttaatctt 856556  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  856557 taataaacatctttaggcactca 856579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 12496476 - 12496698
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  12496476 taggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 12496575  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  12496576 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 12496675  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  12496676 taataaacatcttaaggcactca 12496698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 18383814 - 18383592
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| |||| |||||| ||| |||||     
T  18383814 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttcttgaagtgctcgcgaggcg 18383715  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  18383714 agagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 18383615  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  18383614 taataaacatcttaaggcactca 18383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 14878396 - 14878180
Alignment:
Q  27 cattactacccagggg-tccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagca 125  Q
    |||||||||| ||||| ||||||||||||||||  |||||| |||||||||  ||  |||| | ||||||  ||||||||||| ||  ||||| ||| ||    
T  14878396 cattactacctagggggtccatctctaatcaaattatgcgacacagatcgcaatatcctcaatcgcactcggttctggaagtgctctcgaggcgagaaca 14878297  T
Q  126 tctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaa 225  Q
    |||||||| |||||||||||| || |||| | ||||| | |||| ||||| | ||| ||| | ||||||||| ||||||| ||||||||||||||| |||    
T  14878296 tctgctcgccatggcgagtacgagccagaattccaactaaagttattctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataa 14878197  T
Q  226 acatcttcaggcactca 242  Q
    ||||||| |||||||||    
T  14878196 acatctttaggcactca 14878180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 15051737 - 15051959
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| || ||||||| | ||||||||| ||||||||  ||||||| ||||||| |   |  || ||||||| ||| | || |||||| ||| |||||     
T  15051737 taggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcacaacatcctaacttgcattcagtcctagaagtgctcgcgaggcg 15051836  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | || || |  ||||||||| | ||||||| | |||||||||||||||||||| || |||||||    
T  15051837 agagcatctgctcgccatggcgagtacaagccagaattccgactaaggttgttctaagctaatccaggttcaatctcattctaagttataatttaatctt 15051936  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  15051937 taataaacatctttaggcactca 15051959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 23077375 - 23077153
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | |||||||||||||||||||  |||||| |||||||||   |  |||| ||| | ||  ||||||||||| ||| |||||     
T  23077375 taggtctcattactacctaagggtccatctctaatcaaattatgcgacacagatcgcaaaatcctcaattgaaatcggttctggaagtgctcgcgaggcg 23077276  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||||||  ||| | |||||   |||||||||| | ||| | | | ||||||||| |||  || |||||||||||||    
T  23077275 agagcatctgctcgccatggcgagtacaagctagaattccaacctaagttgttctaagctaaactaggttcaatctcactctgtgtcatcatctaatctt 23077176  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  23077175 taataaacatcttaaggcactca 23077153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 19725807 - 19725590
Alignment:
Q  22 ggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaag 121  Q
    |||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   |  || ||||| | ||| ||||||||||| ||| ||||| ||    
T  19725807 ggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatcctaacttgtattcagttctggaagtgctcgcgaggcgag 19725708  T
Q  122 agcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    |||||||||||| |||||||||||||||||||| ||||||| |  ||||||||| | ||| ||| | |||||||| |||||  | |||||||||||||||    
T  19725707 agcatctgctcgccatggcgagtacaagtcagaatcccaactaaggttgttctaagctaaaccaggttcaatctcgttctagatcatcatctaatcttta 19725608  T
Q  222 ttaaacatcttcaggcac 239  Q
    || |||||||| ||||||    
T  19725607 ttcaacatcttaaggcac 19725590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 23052967 - 23052752
Alignment:
Q  27 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 126  Q
    |||||||||||||||||||||||||||||||   |||||| |||| |||    |  |||||||||| ||||||||| ||||| ||| ||||| |||||||    
T  23052967 cattactacccaggggtccatctctaatcaagttatgcgacacaggtcgtaacatcctcacttgcattcaattctgcaagtgctcgcgaggcgagagcat 23052868  T
Q  127 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaa 226  Q
    ||||||| ||||||||||||||| |||||||||||| |  ||||||||| | | | | |   |||||||||||||||||   |||||||| |||| ||      
T  23052867 ctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaagcttaactagtttcaatctcattctaagtctccatctaatatttaatatg 23052768  T
Q  227 catcttcaggcactca 242  Q
    |||| |||||||||||    
T  23052767 catcatcaggcactca 23052752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 11298426 - 11298204
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | |||||||||  ||| || |||||||||   | ||| | ||||| ||||||||||||||| ||| |||||     
T  11298426 taggtcacattactacctaagggtccaaccctaatcaaattatgagaaacagatcgcaacatactaaattgcattcaattctggaagtgctcgcgaggcg 11298327  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||| ||| ||||||||||||||| |||||| |||||   |||||||||| | ||| ||| | |||||||  |||||| | | |||||||||||    
T  11298326 agagcatctgatcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaaccaggttcaatcttgttctaaatcagcatctaatctt 11298227  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||  |||||||||    
T  11298226 taataaacatctaaaggcactca 11298204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 322810 - 323032
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| | |||||||   | ||| ||||||| | | ||||||||||| ||| |||||     
T  322810 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaatagatcgcaacatactaacttgcatttagttctggaagtgctcgcgaggcg 322909  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||| ||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  322910 agagcatctgctcgccatggtgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 323009  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| | |||||||    
T  323010 taataaacatcttaacgcactca 323032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 12037787 - 12037628
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| | | | |     
T  12037787 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcggctcgccatggcgagtacaagccagaattccaactaatgttgttcaaagcttaa 12037688  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | |||||||||||||||||  |||||||||||||| ||  ||||||||||||||||    
T  12037687 ccaggttcaatctcattctaagtcttcatctaatctttaatatgcatcttcaggcactca 12037628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 26190843 - 26190684
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||   ||||||| || | |||     
T  26190843 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactcaagttgttataagctaaa 26190744  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | |||||||  |||||||| | ||||| ||||||| |||||||||| |||||||||    
T  26190743 ccaggttcaatcttgttctaagtcagcatcttatctttaataaacatcttaaggcactca 26190684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 7793175 - 7793085
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  7793175 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 7793085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 15849914 - 15849824
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  15849914 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaaccaaggttgttccaggtt 15849824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 16797883 - 16797793
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  16797883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttcgaggtt 16797793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 326992 - 326903
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  326992 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 326903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 1598308 - 1598219
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  1598308 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttctaggtt 1598219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 3833952 - 3834041
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  3833952 gcactcaaatctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaaccaaggttgttctaggtt 3834041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 11300339 - 11300250
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  11300339 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 11300250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 17525049 - 17524948
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| || |||||||| ||| ||||||    
T  17525049 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttttggaagtgctcgcgaggca 17524950  T
Q  120 ag 121  Q
    ||    
T  17524949 ag 17524948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 2897652 - 2897562
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | ||||||||||| ||| ||||| ||||||||||||||||||| |||||||||| |||||||||||| |  ||||||| |||||    
T  2897652 tgcactaagttctggaagtgctcgcgaggcgagagcatctgctcgtcatgtcgagtacaagccagattcccaactaaggttgttccaggtt 2897562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 15482939 - 15483029
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||| ||| |  ||||||| |||||    
T  15482939 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccaaactaaggttgttccaggtt 15483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 16808710 - 16808620
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  16808710 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttcgaggtt 16808620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 16909971 - 16910105
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||||| ||||||||  || || | |||||||  |  |  |||||||||||||| |||| |||||| ||| |||||     
T  16909971 taggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatcatgacattctcacttgcactcagttctagaagtgctcgcgaggcg 16910070  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||||||||||| ||||||||||||||| ||||    
T  16910071 agagcatctgctcgccatggcgagtacaagccaga 16910105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 20461329 - 20461239
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||| ||| |  ||||||| |||||    
T  20461329 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcctaactaaggttgttccaggtt 20461239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 15941732 - 15941643
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  15941732 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactacggttgttctaggtt 15941643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 17242250 - 17242339
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  17242250 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 17242339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 38814662 - 38814751
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  38814662 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 38814751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 242
Target Start/End: Original strand, 11863078 - 11863232
Alignment:
Q  86 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 185  Q
    |||||||||||||| |||||||  |   ||||| |||||||||||||| |||||||||| |||| |||| | ||||| | ||| |||||| | ||| |||    
T  11863078 acttgcactcaattttggaagtacttacgaggcgagagcatctgctcgccatggcgagttcaagccagaattccaactaaagtagttctaagctaa-cca 11863176  T
Q  186 agctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
     | |||||||| |||||| | ||||||||||||||| |||| ||||| |||||||||    
T  11863177 ggttcaatctcgttctaaatcatcatctaatctttaataaa-atcttaaggcactca 11863232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 1982636 - 1982549
Alignment:
Q  92 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||| ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  1982636 actcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 1982549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 20723242 - 20723368
Alignment:
Q  53 atcaaaacatgcgatacagatcgcgttaa-actcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtc 151  Q
    |||||||||||||| |||||||||   || ||||| | |||||| | |||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| |    
T  20723242 atcaaaacatgcgacacagatcgcacaaacactcaat-gcactccaatctggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagcc 20723340  T
Q  152 agattcccaacaatagttgttctaggtt 179  Q
    || |||||||| |  |||||||||||||    
T  20723341 agcttcccaactaatgttgttctaggtt 20723368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 321779 - 321689
Alignment:
Q  152 agattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||| ||||| |||||||||| |||||||||    
T  321779 agattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaacctttaataaacatctttaggcactca 321689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 15617656 - 15617714
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| |||||||||||||||||||| | |||||||||||||    
T  15617656 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaag 15617714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 31097383 - 31097310
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| |||||   |||||||||||| ||||||||||||||| ||||||||||||    
T  31097383 tgcactcagttctggaagtgctcgcgaggcggtagcatctgctcgccatggcgagtacaagccagattcccaac 31097310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 7109981 - 7110069
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  7109981 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 7110069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 7113916 - 7114004
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  7113916 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 7114004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 242
Target Start/End: Original strand, 11851860 - 11852014
Alignment:
Q  86 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 185  Q
    ||||||||| | ||||||||||| |   ||||| |||||||||| ||| |||||||||| |||| |||| | ||||| | ||||||| || | ||| |||    
T  11851860 acttgcacttagttctggaagtgcttacgaggcgagagcatctgatcgccatggcgagttcaagccagaattccaactaaagttgttataagctaa-cca 11851958  T
Q  186 agctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
     | |||||||| |||||| | ||||||||||||||| |||| ||||| |||||||||    
T  11851959 ggttcaatctcgttctaaatcatcatctaatctttaataaa-atcttaaggcactca 11852014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 16697071 - 16697159
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || ||||| |  ||||||| |||||    
T  16697071 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagctttccaactaaggttgttccaggtt 16697159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 22337002 - 22337090
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  22337002 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 22337090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 27409470 - 27409382
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  27409470 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 27409382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 11594967 - 11594878
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  11594967 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 11594878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 42326222 - 42326311
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  42326222 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 42326311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 11855015 - 11855103
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| |||||||  || ||| ||||  |||||||||||||| ||||||||||||||| ||| |||||||| || ||||||| |||||    
T  11855015 cactcagttctggatttgctcgcgaggtgagagcatctgctcgccatggcgagtacaagccagcttcccaactatggttgttccaggtt 11855103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 16690498 - 16690586
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||| ||| ||| || ||||| |  ||||||| |||||    
T  16690498 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaaaagccagctttccaactaaggttgttccaggtt 16690586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 22321947 - 22322035
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||| |||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  22321947 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 22322035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 3402775 - 3402694
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  3402775 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactacggttgttccaggtt 3402694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 24188055 - 24188144
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  24188055 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 24188144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 55149256 - 55149345
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||  ||  |||||||| |  |||||||||||||    
T  55149256 gcactcaaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaatccaacttcccaactaatgttgttctaggtt 55149345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 28950007 - 28950065
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||  | ||| |||||||||||||| | |||||||||||||    
T  28950007 cactcaattctggaagtgctcacggggcgagagcatctgctcgccgtggcgagtacaag 28950065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 17524902 - 17524849
Alignment:
Q  189 tcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||||||||||||||| ||||||| ||||||||| ||| || ||| |||||||||    
T  17524902 tcaatctcattctaatttatcatttaatctttaataaccacctttaggcactca 17524849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 839533 - 839613
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||| |||| |||| |||||||||| |||||||  | |||||| |  |||||||||||||    
T  839533 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagtcaactccccaactaatgttgttctaggtt 839613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 11557204 - 11557156
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||    
T  11557204 ttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtac 11557156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 65690 - 65468
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| | |||||||  ||  |||||||||||||| ||||||||||| ||  |||||     
T  65690 taggtctcattactacccaagggtccatctctaatcaaattatgcgacaaagatcgcaatatcctcacttgcactcagttctggaagtgctcacgaggcg 65591  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||  ||||||||||||||| ||| | |||||||  |||||||||||||| |||||||    
T  65590 agagcatctgctcgccatggcgagtacaagccagatccccaacaaaggttgttctaggttaaaccaggttcaatcttgttctaagttatcatttaatctt 65491  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||| |||||||||||||||    
T  65490 taataaatatcttcaggcactca 65468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 53842 - 53932
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  53842 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 53932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 1562 - 1784
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||| ||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  1562 taggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 1661  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||| |||||||||| |||| |||||||||  ||||||||||||| | ||| | ||||| || |||||||||||| | |||||||    
T  1662 agagcatctgctcgccatgacgagtacaagccagactcccaacaaaggttgttctaggtttaaccaggttcaatgtctttctaagttatcctttaatctt 1761  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||||||||||||||||||||    
T  1762 taataaacatcttcaggcactca 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 8854 - 8632
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||| ||  |||||| |||| ||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  8854 taggtctcattactacccaagggtccatctctaatcgaattatgcgacacaggtcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 8755  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| | | | |||||||| |||||||||||||| |||||||    
T  8754 agagcatctgctcgccatggcgagtacaagccagattcccaacaaatgttgttctaggttaaactaggttcaatctcgttctaagttatcatttaatctt 8655  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||  |||||||||| |||||    
T  8654 taataggcatcttcagggactca 8632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 174989 - 175211
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||| ||   |||||||| ||||  ||||||||||| ||| ||||      
T  174989 taggtctcattactaccaaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttggactcggttctggaagtgctcgcgaggtg 175088  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||     
T  175089 agagcatctgctcgcaatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctc 175188  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||  ||||| ||||||||||    
T  175189 taataggcatctccaggcactca 175211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 2e-51; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 13569734 - 13569956
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||| |||||| |||||||||||||||||||  |||||| || ||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  13569734 taggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 13569833  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  13569834 agagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 13569933  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||| || ||| |||||||||    
T  13569934 taataaccacctttaggcactca 13569956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 15093995 - 15094217
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||| ||| |||||||||||||||||||  |||||| |||||||||  ||  || ||||||||||| || |||||||| ||| |||||     
T  15093995 taggtcacattactaaccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcactcagttttggaagtgctcgcgaggcg 15094094  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||| ||||| ||||||||||||||| |||||||||||| | |||||||||| | ||  ||| | |||||||||||| ||||||||||||||||||    
T  15094095 agagcatcagctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctataccaggttcaatctcattccaagttatcatctaatctt 15094194  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  15094195 taataaacatctttaggcactca 15094217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 44675854 - 44676076
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| |||||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| ||||      
T  44675854 taggtcacattactacctaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggtg 44675953  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||| |||||| || |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  44675954 agagcatctgctcgccatggggagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 44676053  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  44676054 taataaacatctttaggcactca 44676076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 12570243 - 12570465
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||| |||   |||||| |||| ||||      |||||||||||||| ||||||||||| ||| |||||     
T  12570243 taggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcacttgcactcagttctggaagtgctcgcgaggcg 12570342  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  12570343 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 12570442  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||| ||||| |||||||||    
T  12570443 taataaatatctttaggcactca 12570465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 15121637 - 15121478
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||||||||  ||||||||||||||| |||||||||||| | |||||||||| | |||     
T  15121637 ctcacttgcactcaattctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattcccaactaaagttgttctaagctaaa 15121538  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | ||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||    
T  15121537 ccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactca 15121478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 15125042 - 15124829
Alignment:
Q  29 ttactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatct 128  Q
    |||||||||||||||||| |||||| ||||  |||||| ||| ||||   ||  |||||||||||||| ||||||||||| ||| ||||| |||||||||    
T  15125042 ttactacccaggggtccaactctaaacaaattatgcgacacatatcgaaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatct 15124943  T
Q  129 gctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaaca 228  Q
    ||| | ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | |||||||| |||||||||||||| ||||||||| ||  ||    
T  15124942 gcttgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcgttctaagttatcatttaatctttaataggca 15124843  T
Q  229 tcttcaggcactca 242  Q
    ||||||||||||||    
T  15124842 tcttcaggcactca 15124829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 23843700 - 23843923
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||| ||||| |||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  23843700 taggtcacattaccacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 23843799  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctc-aatctcattctaagttatcatctaatct 218  Q
    |||||||||||||| ||||||||||||||| ||||||  |||| |  ||||||||| | ||| ||| | || |||||||||| |||||||||| |||||     
T  23843800 agagcatctgctcgccatggcgagtacaagccagattttcaactaatgttgttctaagctaaaccaggttcaaatctcattccaagttatcatttaatca 23843899  T
Q  219 ttattaaacatcttcaggcactca 242  Q
    ||| | |||||||| |||||||||    
T  23843900 ttaatgaacatctttaggcactca 23843923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 16356850 - 16356628
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  16356850 taggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 16356751  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | ||| |   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  16356750 agagcatctgctcgccatggcgagtacaagccagaattccagcttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 16356651  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  16356650 taataaacatcttaaggcactca 16356628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 16487968 - 16487756
Alignment:
Q  27 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 126  Q
    |||||||||| | ||||||||| | ||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| ||||| |||||||    
T  16487968 cattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcat 16487869  T
Q  127 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaa 226  Q
    ||||||| ||||||||||||||| |||| | ||||| | ||| |||||| | |||  || | |||||||| |||||| | ||||||||||||||| ||||    
T  16487868 ctgctcgccatggcgagtacaagccagaattccaactaaagtggttctaagctaaaacaggttcaatctcgttctaaatcatcatctaatctttaataaa 16487769  T
Q  227 catcttcaggcac 239  Q
    |||||| ||||||    
T  16487768 catctttaggcac 16487756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 9556809 - 9556897
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||||    
T  9556809 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaggtt 9556897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 16243227 - 16243139
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||| ||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||||    
T  16243227 cactgaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaggtt 16243139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 36133791 - 36133701
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  36133791 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 36133701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 18222205 - 18222117
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  18222205 cactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 18222117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 16678415 - 16678328
Alignment:
Q  92 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| | |||||||| |||||    
T  16678415 actcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttcaaggtt 16678328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 1951590 - 1951517
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| || || |||||||||||||| ||||||||||||||| ||||||||||||    
T  1951590 tgcactcagttctggaagtgctcgcgaagcgagagcatctgctcgccatggcgagtacaagccagattcccaac 1951517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 15353134 - 15353045
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || ||||| || ||||||| |||||    
T  15353134 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactatggttgttccaggtt 15353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 45938433 - 45938514
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  45938433 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttctaggtt 45938514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 2015057 - 2015145
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| ||||| |||||||  ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  2015057 cactcaattctggaagtgctcgcgaggcgagagcgtctgctcaccatggcgagtacaagccagattcccaactaaggttgttccaggtt 2015145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 19757427 - 19757340
Alignment:
Q  92 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  19757427 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 19757340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 19782379 - 19782466
Alignment:
Q  92 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  19782379 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 19782466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 17152315 - 17152226
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||| |||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  17152315 gcactcagttctggaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 17152226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23139548 - 23139637
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  23139548 gcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 23139637  T

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Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 26243493 - 26243404
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| | | ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  26243493 gcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 26243404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 28569271 - 28569183
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||  || || |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  28569271 cactcaattctggaagtgctcacgaagcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 28569183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 33742657 - 33742745
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  33742657 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 33742745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 27534303 - 27534362
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||| |||||||||||||||    
T  27534303 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 27534362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 4561160 - 4561102
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  4561160 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 4561102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 5756764 - 5756706
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  5756764 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 5756706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 11250389 - 11250300
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  11250389 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 11250300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 18237170 - 18237259
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  18237170 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 18237259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 43255990 - 43255930
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||  ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  43255990 tgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 43255930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 3413082 - 3413159
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttcta 175  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  |||||||||    
T  3413082 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttcta 3413159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23838711 - 23838800
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  23838711 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 23838800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 25555802 - 25555883
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| ||  |||||| |||||    
T  25555802 ttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatgattgttccaggtt 25555883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 42997275 - 42997222
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    |||||||||||||||| ||| ||||| |||||||||| ||| ||||||||||||    
T  42997275 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcgagtac 42997222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 14708459 - 14708403
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||| |||| || ||| ||||| |||||||||||||| |||||||||||||||    
T  14708459 ctcaattcaggaaatgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 14708403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 16348443 - 16348367
Alignment:
Q  166 agttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    |||||||||| | ||| ||| | |||||||| |||||| | ||||||||||||||| |||| ||||| |||||||||    
T  16348443 agttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaatatcttaaggcactca 16348367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 16351668 - 16351620
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  16351668 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 16351620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 41385574 - 41385484
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| |||||||||||||||  |  |||||||| |  |||||||||||||    
T  41385574 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcgaacttcccaactaatgttgttctaggtt 41385484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 9530711 - 9530800
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||  ||||||||  |||| ||||||||||| ||| |||| | ||||| |  |||||||||||||    
T  9530711 gcactcagttctggaagtgctcgcgaggtgagagcatcatctcgccatggcgagtataagccagaattccaactaaggttgttctaggtt 9530800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 14679240 - 14679329
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  ||||| || |  |||||||||||||    
T  14679240 gcactctaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttccctactaatgttgttctaggtt 14679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 14685458 - 14685538
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||  |  |||||||||||||    
T  14685458 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaaataatgttgttctaggtt 14685538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 18602562 - 18602514
Alignment:
Q  101 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||| ||| ||||| |||||||| ||||| |||||||||||||||    
T  18602562 tggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaag 18602514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 15643 - 15845
Alignment:
Q  40 gggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatgg 139  Q
    |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||    
T  15643 gggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15742  T
Q  140 cgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcac 239  Q
    |||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||||||| ||| || ||| ||||||    
T  15743 cgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaccacctttaggcac 15842  T
Q  240 tca 242  Q
    |||    
T  15843 tca 15845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 99; Significance: 5e-49; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 14894 - 15115
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||| ||||||||||||||| |||||||||||||||||  |||||| |||||| ||  ||  |||||| ||||||| ||||||||||| ||| |||||     
T  14894 taggtttcattactacccaggagtccatctctaatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcg 14993  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||| | | |||||||||| | ||| ||| | ||||||||  ||||||||||||||| |||||    
T  14994 agagcatctgctcgccatggcgagtacaagccagattcccatctaaagttgttctaagctaaaccaggttcaatctc-gtctaagttatcatcttatctt 15092  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  15093 taataaacatctttaggcactca 15115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 23909 - 24130
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||| ||||||||||||||| |||||||||| ||||||  |||||| |||||| ||  ||  |||||| ||||||| ||||||||||| ||| |||||     
T  23909 taggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcg 24008  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||  |||||||| |||| ||||||| | |||||||||| | ||| ||| | ||||||||  |||||||||||||||||||||    
T  24009 agagcatctgctcgccatggaaagtacaagccagactcccaactaaagttgttctaagctaaaccaggttcaatctc-gtctaagttatcatctaatctt 24107  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  24108 taataaacatctttaggcactca 24130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 39333 - 39554
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||| ||||||||||||||| |||||||||| ||||||  |||||| |||||| ||  ||  |||||| ||||||| ||||||||||| ||| |||||     
T  39333 taggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcg 39432  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||  |||||||| |||| ||||||| | |||||||||| | ||| ||| | ||||||||  |||||||||||||||||||||    
T  39433 agagcatctgctcgccatggaaagtacaagccagactcccaactaaagttgttctaagctaaaccaggttcaatctc-gtctaagttatcatctaatctt 39531  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  39532 taataaacatctttaggcactca 39554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 18462 - 18684
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| ||| |||||  ||  |||||||||||||| ||||||||| | ||| |||||     
T  18462 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacatatcgcaatatcctcacttgcactcagttctggaagcgctcgtgaggcg 18561  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||| |||||| ||||||||||||||| |||||||| ||| |  | ||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  18562 agagcatttgctcgccatggcgagtacaagccagattccaaactaatgatgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 18661  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  18662 taataaacatctttaggcactca 18684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 76998 - 76910
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||| | ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  76998 cactcaattctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtacaagccagcttcccaacgaaggttgttccaggtt 76910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 242
Target Start/End: Original strand, 32665 - 32878
Alignment:
Q  29 ttactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatct 128  Q
    |||||||||||||||||| |||||| ||||  |||||| |||||||||| ||  |||||||||||||| ||||||||||| ||| ||||| |||||||||    
T  32665 ttactacccaggggtccaactctaaacaaattatgcgacacagatcgcgatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatct 32764  T
Q  129 gctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaaca 228  Q
    ||||  |||| |||||||||| |||||||||||| |  ||||||||| | ||| ||| | |||||||| |||||||||||||| ||||||||| ||  ||    
T  32765 gctcaacatgtcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcgttctaagttatcatttaatctttaataggca 32864  T
Q  229 tcttcaggcactca 242  Q
    ||||||||||||||    
T  32865 tcttcaggcactca 32878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 8778 - 8836
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  8778 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 8836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 20 - 228
Target Start/End: Original strand, 6325 - 6533
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||| || ||||||||||||| ||||||||||||||||  |||||| |||||||||   |  ||||||||||| || ||||||||||| ||| ||||      
T  6325 taggtttctttactacccagggatccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcacacagttctggaagtgctcgcgaggag 6424  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  6425 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 6524  T
Q  220 tattaaaca 228  Q
    || ||||||    
T  6525 taataaaca 6533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 18350 - 18128
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| ||| |||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  18350 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacaaatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 18251  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||| || |||||||||||| |  ||| ||||| | ||| ||| | ||||| |||||||||||||||||  |||  |    
T  18250 agagcatctgctcgccatggcgagtactagccagattcccaactaatgttattctaagctaaaccaggttcaatttcattctaagttatcattaaattat 18151  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  18150 taataaacatctttaggcactca 18128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 3964 - 4185
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||||||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  3964 taggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 4062  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||| | |||| |||||||||||||||  ||||||||||| |  ||||||||| | ||| ||| | |||||||||||||||| |||||| ||||| |    
T  4063 agagcatttactcgccatggcgagtacaagctagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagctatcatttaatcat 4162  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  4163 taataaacatctttaggcactca 4185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 8395 - 8616
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||||||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  8395 taggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 8493  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||| | |||| |||||||||||||||  ||||||||||| |  ||||||||| | ||| ||| | |||||||||||||||| |||||| ||||| |    
T  8494 agagcatttactcgccatggcgagtacaagctagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagctatcatttaatcat 8593  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  8594 taataaacatctttaggcactca 8616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 242
Target Start/End: Complemental strand, 16238 - 16024
Alignment:
Q  28 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatc 127  Q
    ||||||||||| ||||||| |||||||||||  |||||| |||||||||   || |||||||||||||||||||||||||| ||| ||||| || |||||    
T  16238 attactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacaacctcacttgcactcaattctggaagtgctcgcgaggcgagggcatc 16139  T
Q  128 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 227  Q
    |||||| ||||||||||||||| ||||||||| || |  ||||||||| | ||| ||  | |||||||||||||||  |||||| ||||||||| |||||    
T  16138 tgctcgccatggcgagtacaagccagattccctaccaatgttgttctaagctaaacctggttcaatctcattctaaactatcatttaatctttaataaac 16039  T
Q  228 atcttcaggcactca 242  Q
    ||||| |||||||||    
T  16038 atctttaggcactca 16024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 103 - 242
Target Start/End: Original strand, 26706 - 26845
Alignment:
Q  103 gaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattcta 202  Q
    |||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||    
T  26706 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaggttcaatctcattcta 26805  T
Q  203 agttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||||||||| ||||||||| ||| ||||||||||||||||    
T  26806 agttatcatttaatctttaataagcatcttcaggcactca 26845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 18490 - 18331
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | |||     
T  18490 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaa 18391  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  18390 ccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactca 18331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 6975 - 6753
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||| ||||| ||||||||  ||||||| |||||||||   |  |||| ||||||||| ||||||||||| ||| |||||     
T  6975 taggtcacattactacctaagggcccatccctaatcaactcatgcgacacagatcgcaacattctcaattgcactcagttctggaagtgctcgcgaggcg 6876  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  6875 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 6776  T
Q  220 tattaaacatcttcaggcactca 242  Q
    |||| |  ||||| |||||||||    
T  6775 tatttattatctttaggcactca 6753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 242
Target Start/End: Original strand, 27048 - 27267
Alignment:
Q  23 gtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaaga 122  Q
    |||||||||||||||| |||||||||||||| ||||| || ||| |||||||||  ||  |||||||||||||| |||||||| || | | |||||||||    
T  27048 gtctcattactacccaagggtccatctctaaacaaaatattcgaaacagatcgcaatatcctcacttgcactcagttctggaaatgcttgcgaggcaaga 27147  T
Q  123 gcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttat 222  Q
    ||||||||||| |||||||| |||||| |||| | ||||| | |||||||||| | ||  ||| | | |||||| |||||||||||||| |||||||||     
T  27148 gcatctgctcgccatggcgaatacaagccagaattccaactaaagttgttctaagctataccaggttaaatctcgttctaagttatcatttaatctttaa 27247  T
Q  223 taaacatcttcaggcactca 242  Q
    ||  ||||||||||||||||    
T  27248 tatgcatcttcaggcactca 27267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 87; Significance: 8e-42; HSPs: 4)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 34807 - 34585
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||| |||   ||| || | || ||||  |   |||||||||||||| ||||||||||| ||| |||||     
T  34807 taggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggtcgcaatgttctcacttgcactcagttctggaagtgctcgcgaggcg 34708  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  34707 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 34608  T
Q  220 tattaaacatcttcaggcactca 242  Q
    ||  ||| ||||| |||||||||    
T  34607 taaaaaaaatcttaaggcactca 34585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 41387 - 41228
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||  ||||| ||  ||||  | |||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | |||     
T  41387 ctcacttgcactcagttctaaaagtgctcacgaggtgaaagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaa 41288  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    | | | ||||||||| ||||||| ||||||||||||||| |||| ||||| |||||||||    
T  41287 ctaggttcaatctcactctaagtcatcatctaatctttaataaatatctttaggcactca 41228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 64131 - 64203
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |||||||    
T  64131 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 64203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 76015 - 76074
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  76015 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 76074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 15566 - 15354
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  | |||| ||||||| |  ||  |||||||||||| | |||| |||||| ||| |||||     
T  15566 taggtctcattactacccaagggtccatctctaatcaaattaagcgacacagatcacaatatcctcacttgcactaagttctagaagtgatcgcgaggcg 15467  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||| | ||||||||||||||| |||||||||||||| |||||||||||||          |||||||| |||||||||||||| |||||||    
T  15466 agagcatctgcttgccatggcgagtacaagccagattcccaacaaaagttgttctaggt----------tcaatctcgttctaagttatcatttaatctt 15377  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || || ||||||| | |||||||    
T  15376 taatagacatctttaagcactca 15354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 21703 - 21481
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| |||| |||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  21703 taggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 21604  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | ||| |||   |||||||| |||||||||||||| |||||||    
T  21603 agagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaaccagattcaatctcgttctaagttatcatttaatctt 21504  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||  ||||||||||||||||    
T  21503 tactatgcatcttcaggcactca 21481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 29595 - 29373
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| |||| |||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  29595 taggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 29496  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | ||| |||   |||||||| |||||||||||||| |||||||    
T  29495 agagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaaccagattcaatctcgttctaagttatcatttaatctt 29396  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || ||  ||||||||||||||||    
T  29395 tactatgcatcttcaggcactca 29373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 23564 - 23352
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| ||||||| |  ||||||||  |||||| | |||||||      |||||||||||||| |||| |||||| ||| |||||     
T  23564 taggtcacattactacccaagggtccaacattaatcaaattatgcgacaaagatcgcaaagttctcacttgcactcagttctagaagtgctcgcgaggcg 23465  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  23464 agagcatctgctcgccatggcgagaacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 23365  T
Q  220 tattaaacatctt 232  Q
    || ||||||||||    
T  23364 taataaacatctt 23352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 38289 - 38175
Alignment:
Q  128 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 227  Q
    |||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| | | | ||||||||| ||||||| ||||| ||||||||| |||||    
T  38289 tgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaactatgttcaatctcactctaagtcatcatgtaatctttaataaac 38190  T
Q  228 atcttcaggcactca 242  Q
    ||||| ||| |||||    
T  38189 atctttaggtactca 38175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 38376 - 38320
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgc 76  Q
    |||||| |||||||||||| ||||||| |||||||||||  |||||| |||||||||    
T  38376 taggtcacattactacccaagggtccaactctaatcaaattatgcgacacagatcgc 38320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 98 - 242
Target Start/End: Complemental strand, 191100 - 190956
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctca 197  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||   |||||||||||||| ||| | |||||||||    
T  191100 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaattttgttctaggttaaaccaggttcaatctca 191001  T
Q  198 ttctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    |||||||||||||| ||||| ||  |||||||||| |||||||||    
T  191000 ttctaagttatcatttaatcatttctaaacatctttaggcactca 190956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 192802 - 192659
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcat 198  Q
    |||||||||  ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||   |||||||||||||| ||| | |||||||||     
T  192802 tctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaagtttgttctaggttaaaccaggttcaatctcaa 192703  T
Q  199 tctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||||||||||||| ||||| ||  |||||||||| |||||||||    
T  192702 tctaagttatcatttaatcatttctaaacatctttaggcactca 192659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 56376 - 56464
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  56376 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 56464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 6199 - 5984
Alignment:
Q  27 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 126  Q
    |||||||||  ||||||||||||||||||||   |||||| |||  ||||   |  |||||||||| ||||||||||||||| ||| ||||| |||||||    
T  6199 cattactacttaggggtccatctctaatcaagttatgcgacacaagtcgcaacatcctcacttgcattcaattctggaagtgctcgcgaggcgagagcat 6100  T
Q  127 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaa 226  Q
    ||||||| ||||||||||||||| |||||||||||| |  ||||||||| | | | ||| | ||||||||| |||||||  |||||||||||||| ||      
T  6099 ctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaagcttaaccaggttcaatctcaatctaagtcttcatctaatctttaatatg 6000  T
Q  227 catcttcaggcactca 242  Q
    ||||||||||||||||    
T  5999 catcttcaggcactca 5984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 13911 - 13752
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| | ||||| |||| | |||     
T  13911 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttggtctaagctaaa 13812  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | ||||||||| | ||||| ||||||||||||||| |||| ||||| |||||||||    
T  13811 ccaggttcaatctcactataagtcatcatctaatctttaataaatatctttaggcactca 13752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 46624 - 46402
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| ||||||||   |||||| |||||||||   |  || ||||||||||| ||||||||||| ||| ||||      
T  46624 taggtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcgaggag 46525  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||| || ||  ||||||||||||||| |||||||| ||| | |||||||||| | ||| ||||| ||||||||| ||||||| |||||||||||||    
T  46524 agagcatttggtcaccatggcgagtacaagccagattcctaactaaagttgttctaagctaaaccaagttcaatctcactctaagtcatcatctaatctt 46425  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  46424 taataaacatctttaggcactca 46402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 6313 - 6091
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| ||| |||||  ||  || ||||||| ||| ||||||||||| ||| |||||     
T  6313 taggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacaaatcgcaatatcctaacttgcattcagttctggaagtgctcgcgaggcg 6214  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||||| ||||||||||||||| | |||||||||||||    
T  6213 agagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaaccaagttcaatctcattctaaatcatcatctaatctt 6114  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||  |||||||||    
T  6113 taataaacatctgaaggcactca 6091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 1712 - 1934
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||| | |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  1712 taggtcacattactacctaagggtccaaccctaatcaatttatgcaaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 1811  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  1812 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 1911  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  1912 taataaacatcttaaggcactca 1934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 240
Target Start/End: Original strand, 178974 - 179094
Alignment:
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||| ||||||||||||||| |||||||    
T  178974 agagcatctgctagccatggcgagtacaagccagattcccaacaatggttgttctaagttaaaccaggttcaatcttattctaagttatcatttaatctt 179073  T
Q  220 tattaaacatcttcaggcact 240  Q
    || ||| ||||||||||||||    
T  179074 taataagcatcttcaggcact 179094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 4712 - 4871
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||| ||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| ||||||  | |||||||||| | |||     
T  4712 ctcacttgaactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatcccaaataaagttgttctaagctaaa 4811  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | |||||||  |||||||| ||||||||||||||| |||||||||| |||||||||    
T  4812 ccaggttcaatcttgttctaagtcatcatctaatctttaataaacatctttaggcactca 4871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 72; Significance: 7e-33; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 13043 - 13202
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||| || || | ||||||| | |||| ||||| | |||     
T  13043 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacgagccataatcccaactaaagttattctaagctaaa 13142  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||| | |||||||||||||| |||||||| ||||||||| |||||||||| |||||||||    
T  13143 ccaggttcaatctcattctatgttatcatttaatctttaataaacatcttaaggcactca 13202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 61439 - 61381
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  61439 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 61381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 65352 - 65267
Alignment:
Q  94 tcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||| ||| ||||| |||||||||||||| | |||||| |||||| ||  || ||||| |  |||||||||||||    
T  65352 tcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgaatacaagccaactttccaactaaggttgttctaggtt 65267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 2098 - 2320
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | |||||||     |  |||||||||||||| |||| |||||| ||| |||||     
T  2098 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcataacattctcacttgcactcagttctcgaagtgctcgcgaggcg 2197  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | ||| ||| | ||||||||| |||| ||| |||| |||||||    
T  2198 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaaccaggttcaatctcagtctaggttctcatttaatctt 2297  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  2298 taataaacatctttaggcactca 2320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 1981 - 1759
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | |||||| |  ||||||| ||||||| |   |  |||| ||||||||| ||||||||||| ||| |||||     
T  1981 taggtcacattactacctaagggtccaaccctaatcgattcatgcgacacagatcacaacattctcatttgcactcagttctggaagtgctcgcgaggcg 1882  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||||||  ||| | ||||| | |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  1881 agagcatctgctcgccatggcgagtacaagctagaattccaactaaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 1782  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || || ||||||| |||||||||    
T  1781 taatacacatcttaaggcactca 1759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 7512 - 7734
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || ||||| ||| |   |  |||||||||||||| || |||||||| ||| |||||     
T  7512 taggtctcattactacctaagggtccatccctaatcaattcaagcaatacaaatcactacattctcacttgcactcagttttggaagtgctcgcgaggcg 7611  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||| |||||| || ||||||| |||| |||| ||||||| | | |||||| | | ||| ||| | ||||||||| ||||||||||||| |||||||    
T  7612 agagcatttgctcgccacggcgagtccaagccagaatcccaactaaaattgttccaagctaaaccaggttcaatctcagtctaagttatcatttaatctt 7711  T
Q  220 tattaaacatcttcaggcactca 242  Q
    || |||||||||| |||||||||    
T  7712 taataaacatctttaggcactca 7734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 242
Target Start/End: Complemental strand, 16949 - 16796
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 188  Q
    |||||||  |||| |||||| ||| ||||| |||||||||||||| ||||||||||||| | |||||||||||| |  ||||||||| | ||| |||||     
T  16949 tgcactcggttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacatgccagattcccaactaaggttgttctaagctaaaccaagt 16850  T
Q  189 tcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    |||||||  |||||||| |||||||||| |||| |||||||||| |||||||||    
T  16849 tcaatcttgttctaagtcatcatctaatatttaataaacatcttaaggcactca 16796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 242
Target Start/End: Complemental strand, 30573 - 30420
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 188  Q
    |||||||| ||||| ||||| ||| ||||| |||||||||||||| ||||||||||| ||| |||||| |||||   |||||||||| | ||| ||| |     
T  30573 tgcactcagttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagtataagccagatttccaactccagttgttctaagctaaaccaggt 30474  T
Q  189 tcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    |||||||| |||||| | |||||||||||||||||||| ||||| |||||||||    
T  30473 tcaatctcgttctaaatcatcatctaatctttattaaagatcttaaggcactca 30420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 2157 - 2213
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  2157 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 2213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 3128 - 3283
Alignment:
Q  87 cttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaa 186  Q
    |||||| ||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||| | |||||   |||||||||| | ||| |||     
T  3128 cttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagaattccaacttaagttgttctaagctaaaccag 3227  T
Q  187 gctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    |  ||||||||||||| |||||||| ||||||||| |||||||||| |||||||||    
T  3228 gtgcaatctcattctaggttatcatttaatctttaataaacatcttaaggcactca 3283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 6794 - 6949
Alignment:
Q  87 cttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaa 186  Q
    |||||| ||| ||||||||||| ||| ||||| |||||||||||||| |||||  |||||||| |||| | |||||   |||||||||| | ||| |||     
T  6794 cttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaagtacaagccagaattccaacttaagttgttctaagctaaaccag 6893  T
Q  187 gctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    |  ||||||||||||| |||||||| ||||||||| |||||||||| |||||||||    
T  6894 gtgcaatctcattctaggttatcatttaatctttaataaacatcttaaggcactca 6949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 2129 - 2268
Alignment:
Q  101 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattc 200  Q
    |||||||| ||| ||||| ||||||||| |||| |||||||||||||||||||||| |||||   |||||||||| | ||| ||| | |||||||| ||     
T  2129 tggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagtcagatttccaactcaagttgttctaagataaaccaggttcaatctcgttt 2228  T
Q  201 taagttatcatctaatctttattaaacatcttcaggcact 240  Q
    ||| | |||||||||||||||||||||||||| |||||||    
T  2229 taaatcatcatctaatctttattaaacatcttaaggcact 2268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 9811 - 9950
Alignment:
Q  101 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattc 200  Q
    |||||||| ||| ||||| ||||||||| |||| |||||||||||||||||||||| |||||   |||||||||| | ||| ||| | |||||||| ||     
T  9811 tggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagtcagatttccaactcaagttgttctaagataaaccaggttcaatctcgttt 9910  T
Q  201 taagttatcatctaatctttattaaacatcttcaggcact 240  Q
    ||| | |||||||||||||||||||||||||| |||||||    
T  9911 taaatcatcatctaatctttattaaacatcttaaggcact 9950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 612 - 822
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||||| | ||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  612 taggtcgcattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 711  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||  ||||||||||||||| |||||| |||||   ||||||||||   ||| ||| | |||||||| |||||| | |||||||||||||    
T  712 agagcatctgctcaccatggcgagtacaagccagatttccaactcaagttgttctaaactaaaccaggttcaatctcgttctaaatcatcatctaatctt 811  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  812 taataaacatc 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 5872 - 6026
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| |  ||||||| | | ||| ||| |    
T  5872 ttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaaggttgttcgaagctaaaccagg 5971  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
     |||||||  |||||||| ||||||||||||||| |||||||||| |||||||||    
T  5972 ttcaatcttgttctaagtcatcatctaatctttaataaacatcttaaggcactca 6026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 7067 - 7221
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |  |||| | |||||||| | | ||| ||| |    
T  7067 ttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattacaactaaagttgttcaaagctaaaccagg 7166  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
     |||||||  |||||||| ||||||||||||||| |||||||||| |||||||||    
T  7167 ttcaatcttgttctaagtcatcatctaatctttaataaacatcttaaggcactca 7221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 1183 - 1337
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| |||| |||||| ||| ||||| ||| |||||||||| ||||||||||||||| |||||| |||||   |||||||||| | |||  || |    
T  1183 ttgcattcagttctagaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaatcagg 1282  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
     ||||||||||||||| | ||||||||||||||| || ||||||| |||||||||    
T  1283 ttcaatctcattctaaatcatcatctaatctttaatagacatcttaaggcactca 1337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 2502 - 2412
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||||    
T  2502 tgcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaggtt 2412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 242
Target Start/End: Original strand, 377 - 601
Alignment:
Q  18 attaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagagg 117  Q
    |||||||| |||||||||| | ||||||||| ||||||||   |||||| |||||||    ||  || ||||||||||| |||| |||||| | | ||||    
T  377 attaggtcacattactacctaagggtccatccctaatcaatttatgcgacacagatccaaatatcctaacttgcactcagttctagaagtgcttgcgagg 476  T
Q  118 caagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatc 217  Q
      ||||||||| |||| ||||||||||||||| |||| | ||||| | |||||||||| | ||| ||| | |||||||| |||||||| ||| ||||| |    
T  477 agagagcatctactcgccatggcgagtacaagccagaattccaactaaagttgttctaagctaaaccaggttcaatctcgttctaagtcatcgtctaacc 576  T
Q  218 tttattaaacatcttcaggcactca 242  Q
     ||| |||||||||| | |||||||    
T  577 attaataaacatctttatgcactca 601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 804 - 945
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | |||||||||||||||||||  |||||| |||||||||  ||  |||| || |||||| ||||||||||| ||  |||||     
T  804 taggtctcattactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcatttacactcagttctggaagtgctcacgaggcg 903  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 161  Q
    ||| |||||||||| |||||||||| || | |||| ||||||    
T  904 agaacatctgctcgccatggcgagttcagggcagaatcccaa 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 21466 - 21254
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||||| ||||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  21466 taggtcacattactacctaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 21367  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| | ||||| |  |||| |||| | ||| ||| | |||||||||| |||  ||||||| ||||| |    
T  21366 agagcatctgctcgccacggcgagtacaagccagaattccaactaaggttgctctaagctaaaccaggttcaatctcatcctacattatcatttaatcct 21267  T
Q  220 tattaaacatctt 232  Q
    || || |||||||    
T  21266 taatacacatctt 21254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 566 - 710
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| | ||||||||          ||||| |||| |    
T  566 ttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaacaat----------ggttattccagg 655  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
     |||||||  |||||||| |||||||||||||||||||||||||| |||||||||    
T  656 ttcaatcttgttctaagtcatcatctaatctttattaaacatcttaaggcactca 710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 1037 - 923
Alignment:
Q  128 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 227  Q
    |||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| | | | ||||||||||||||||||||||| ||||||||| ||  |    
T  1037 tgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaactaggttcaatctcattctaagttatcatttaatctttaataggc 938  T
Q  228 atcttcaggcactca 242  Q
    |||||||||||||||    
T  937 atcttcaggcactca 923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 1116 - 1036
Alignment:
Q  28 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtg 108  Q
    ||||||||||| || ||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| |||||||||||    
T  1116 attactacccaaggatccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtg 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 18461 - 18371
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||  |  |||||||||||||    
T  18461 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaaataaggttgttctaggtt 18371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 19465 - 19555
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  19465 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 19555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 13181 - 13271
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||  ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  13181 tgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 13271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 62541 - 62597
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||  ||| ||||| |||||||||||||| |||||||||||||||    
T  62541 ctcaattctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaag 62597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 66244 - 66154
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  66244 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 66154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 228202 - 228112
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  228202 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 228112  T

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Target: scaffold0003 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 71590 - 71680
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  71590 tgcactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 71680  T

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Target: scaffold0003; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 96883 - 96973
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  96883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 96973  T

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Target: scaffold0003; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 139988 - 140077
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  139988 gcactcagttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagccagaattccaactaaggttgttctaggtt 140077  T

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Target: scaffold0003; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 413870 - 413822
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  413870 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 413822  T

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Target: scaffold1461 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 207 - 296
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  207 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 296  T

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Target: scaffold1326 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 1324 - 1175
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||| | ||||||||||| ||| ||||| ||||||||||||||  |||||||||||||| |||| | ||||||||          ||||| |    
T  1324 ctcacttgcacttagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagaattccaacaat----------ggttatt 1235  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    ||||| |||||||  |||||||| | ||||||||||||| |||||||||  |||||||||    
T  1234 ccaagttcaatcttgttctaagtcaacatctaatctttaataaacatctaaaggcactca 1175  T

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Target: scaffold0585 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 9613 - 9701
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||| |  ||||||| |||||    
T  9613 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattcccaactaaggttgttccaggtt 9701  T

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Target: scaffold0220 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 4767 - 4612
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||  || ||||| || ||| ||||| ||||||||| |||  |||| |||||||||| |||| | ||||| | |||||||||| | |||     
T  4767 ctcaattgcactcggttttggaaatgctcgcgaggcgagagcatcttctcaccatgacgagtacaagccagaattccaactaaagttgttctaagctaaa 4668  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggca 238  Q
    ||  | ||||||||| ||||||| ||||||||||||||| |||||||||| |||||    
T  4667 cccggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggca 4612  T

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Target: scaffold0193 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 9701 - 9787
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  9701 ctcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 9787  T

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Target: scaffold0107 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 15247 - 15157
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||| |  ||||||| |||||    
T  15247 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattcccaactaaggttgttccaggtt 15157  T

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Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 173567 - 173657
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  173567 tgcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 173657  T

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Target: scaffold1220 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 2079 - 2148
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcc 158  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||    
T  2079 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcc 2148  T

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Target: scaffold0410 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 11658 - 11747
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||| |||||| |  |||||||||||||    
T  11658 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatccccaactaaggttgttctaggtt 11747  T

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Target: scaffold0177 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 13316 - 13243
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||  |||||||||||||| ||||||||||||||| ||||||||||||    
T  13316 tgcactcagttctggaagtgctcgcgaggagagagcatctgctcgccatggcgagtacaagccagattcccaac 13243  T

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Target: scaffold0168 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 3359 - 3286
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||    
T  3359 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaac 3286  T

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Target: scaffold0120 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 19845 - 19756
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||||||||||| |  ||||||| |||||    
T  19845 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgttccaggtt 19756  T

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Target: scaffold0070 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 10181 - 10270
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  10181 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 10270  T

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Target: scaffold0012 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 24796 - 24707
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||||| |||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  24796 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 24707  T

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Target: scaffold0483 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 608 - 684
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaat 165  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||||||    
T  608 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaat 684  T

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Target: scaffold0109 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 45395 - 45471
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaat 165  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||||||    
T  45395 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaat 45471  T

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Target: scaffold0109; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 11129 - 11071
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||||| |||||||| ||| ||||| |||||||||||||| ||||| |||||||||    
T  11129 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaag 11071  T

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Target: scaffold0109; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 38646 - 38588
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||||||| |||||| ||  ||||| |||| ||||||||| |||||||||||||||    
T  38646 cactcaattcttgaagtgctcacgaggcgagaggatctgctcgccatggcgagtacaag 38588  T

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Target: scaffold0280 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 19120 - 19030
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  19120 tgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 19030  T

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Target: scaffold0010 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23494 - 23583
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||| |||| |  ||||||| |||||    
T  23494 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattctcaactaaggttgttccaggtt 23583  T

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Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 242335 - 242424
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  242335 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 242424  T

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Target: scaffold0372 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 4928 - 4840
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  4928 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 4840  T

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Target: scaffold0346 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 15374 - 15490
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 188  Q
    |||||||| ||||| ||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |  |||| | |||||||||| | ||| ||| |     
T  15374 tgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatttcaactaaagttgttctaagctaaaccaggt 15473  T
Q  189 tcaatctcattctaagt 205  Q
    |||||||  ||||||||    
T  15474 tcaatcttgttctaagt 15490  T

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Target: scaffold0342 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 7098 - 7042
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  7098 gcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtac 7042  T

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Target: scaffold0284 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 18633 - 18721
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | | |||||| |||| |||||||||||| |  ||||||| |||||    
T  18633 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccttagcgagttcaagccagattcccaactaaggttgttccaggtt 18721  T

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Target: scaffold1552 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 639 - 716
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttcta 175  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | |||||||  |||||||||    
T  639 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaacaaaggttgttcta 716  T

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Target: scaffold0439 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 2255 - 2174
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || ||||| |  ||||||| |||||    
T  2255 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactacggttgttccaggtt 2174  T

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Target: scaffold0439; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 10115 - 10064
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  10115 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 10064  T

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Target: scaffold0184 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 4052 - 3995
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||    
T  4052 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 3995  T

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Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 35338 - 35249
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| ||| || ||||| |  ||||||| |||||    
T  35338 gcactcagttctggaagtgctcgcgaggcgagagcatctcctcgccatggcgagtacaagccaggtttccaactaaggttgttccaggtt 35249  T

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Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 36583 - 36672
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||    |||||||||||||    
T  36583 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaggttgttctaggtt 36672  T

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Target: scaffold0064 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 64391 - 64338
Alignment:
Q  189 tcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    |||||||||||||| |||||||| ||||||||| |||||||||| |||||||||    
T  64391 tcaatctcattctatgttatcatttaatctttaataaacatcttaaggcactca 64338  T

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Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 15618 - 15674
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| ||| ||||| |||||||||||||| ||| |||||||||||    
T  15618 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccattgcgagtacaag 15674  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 58545 - 58457
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| |||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  58545 cactcaattctagaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 58457  T

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Target: scaffold0130 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 5828 - 5769
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| |||||||||||||||    
T  5828 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaag 5769  T

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Target: scaffold0546 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 2178 - 2236
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||||| |||||||| ||| ||||| |||||||||||||| ||||| |||||||||    
T  2178 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaag 2236  T

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Target: scaffold0334 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 18184 - 18099
Alignment:
Q  94 tcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||| ||| ||||  |||||||| ||||| ||| ||||||||||| |||||||| ||| |  ||||||| |||||    
T  18184 tcaattctggaagtgctcgcgaggtgagagcatcagctcgccatagcgagtacaagccagattcctaactaaggttgttccaggtt 18099  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 192144 - 192055
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||||||| ||  ||||| |||||||| ||||| || |||||||||||| |||| | |||| | | ||||||| |||||    
T  192144 gcactcaattctggaagtgctcacgaggcgagagcatcagctcgccacggcgagtacaagccagaattccaatactggttgttccaggtt 192055  T

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Target: scaffold0079 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 44418 - 44494
Alignment:
Q  166 agttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatcttcaggcactca 242  Q
    |||||||||| | ||| ||| | |||||||| |||||| | ||||||||||||||| |||| ||||| |||||||||    
T  44418 agttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaatatcttaaggcactca 44494  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 16488 - 16432
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| | | ||||| || ||||||||||| |||||||||||||||    
T  16488 ctcaattctggaagtgcttgcgaggcgagtgcatctgctcgccatggcgagtacaag 16432  T

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Target: scaffold0138 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 30036 - 29946
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||  |  |||||||||||||    
T  30036 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaaataatgttgttctaggtt 29946  T

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Target: scaffold0637 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 8849 - 8938
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| |||||||| || ||| ||||| ||||||||| |||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  8849 gcactcagttctggaaatgctcgcgaggcgagagcatctcctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 8938  T

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