View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5457-Insertion-1 (Length: 829)

Name: NF5457-Insertion-1
Description: NF5457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5457-Insertion-1
NF5457-Insertion-1
[»] chr5 (22 HSPs)
chr5 (426-815)||(27244084-27244480)
chr5 (8-365)||(27244541-27244898)
chr5 (295-344)||(21657388-21657437)
chr5 (281-351)||(23118034-23118104)
chr5 (281-320)||(27651544-27651583)
chr5 (281-319)||(4432124-4432162)
chr5 (288-350)||(7216819-7216881)
chr5 (281-335)||(29695023-29695077)
chr5 (281-331)||(40445991-40446041)
chr5 (281-337)||(689555-689611)
chr5 (292-344)||(3052200-3052252)
chr5 (288-344)||(41630102-41630158)
chr5 (286-345)||(42168934-42168993)
chr5 (281-319)||(7070925-7070963)
chr5 (281-319)||(8545004-8545042)
chr5 (297-335)||(31602824-31602862)
chr5 (286-320)||(42964522-42964556)
chr5 (292-341)||(2951361-2951409)
chr5 (286-343)||(5846042-5846099)
chr5 (281-322)||(11647205-11647246)
chr5 (281-350)||(22498950-22499018)
chr5 (295-324)||(42854330-42854359)
[»] chr4 (33 HSPs)
chr4 (286-332)||(46434762-46434808)
chr4 (281-330)||(39842016-39842065)
chr4 (283-350)||(9783909-9783976)
chr4 (292-344)||(1657020-1657072)
chr4 (292-344)||(29568605-29568657)
chr4 (288-332)||(54677240-54677284)
chr4 (281-341)||(56096212-56096272)
chr4 (281-350)||(11269702-11269771)
chr4 (281-350)||(34595920-34595989)
chr4 (281-350)||(43034326-43034395)
chr4 (287-320)||(50650941-50650974)
chr4 (288-336)||(16703031-16703079)
chr4 (292-324)||(21465630-21465662)
chr4 (286-350)||(28435232-28435296)
chr4 (281-320)||(874467-874506)
chr4 (297-336)||(3299092-3299131)
chr4 (297-332)||(12192493-12192528)
chr4 (294-333)||(37735810-37735849)
chr4 (285-320)||(47016630-47016665)
chr4 (281-328)||(54587908-54587955)
chr4 (281-319)||(6459939-6459977)
chr4 (286-320)||(12439677-12439711)
chr4 (286-344)||(17216119-17216177)
chr4 (286-320)||(36071157-36071191)
chr4 (286-320)||(42756120-42756154)
chr4 (292-322)||(45029617-45029647)
chr4 (286-344)||(56551582-56551640)
chr4 (286-335)||(10564464-10564513)
chr4 (283-344)||(11166696-11166757)
chr4 (296-333)||(11286782-11286819)
chr4 (286-331)||(12263265-12263310)
chr4 (286-319)||(29808283-29808316)
chr4 (286-319)||(36203249-36203282)
[»] chr1 (35 HSPs)
chr1 (281-335)||(10841908-10841962)
chr1 (281-332)||(22388177-22388228)
chr1 (286-344)||(41974774-41974832)
chr1 (283-332)||(16967196-16967245)
chr1 (286-335)||(17917137-17917186)
chr1 (295-344)||(33020033-33020082)
chr1 (283-344)||(33175271-33175332)
chr1 (286-331)||(35632912-35632957)
chr1 (281-321)||(3248785-3248825)
chr1 (281-353)||(9398394-9398466)
chr1 (286-350)||(9872089-9872153)
chr1 (286-350)||(19262891-19262955)
chr1 (281-317)||(29701337-29701373)
chr1 (292-344)||(34083356-34083408)
chr1 (281-344)||(6000133-6000196)
chr1 (283-322)||(19533190-19533229)
chr1 (281-320)||(30548105-30548144)
chr1 (281-316)||(31962455-31962490)
chr1 (281-344)||(33153870-33153933)
chr1 (281-320)||(43843899-43843938)
chr1 (297-351)||(3157700-3157754)
chr1 (293-335)||(22335378-22335420)
chr1 (281-319)||(23405373-23405411)
chr1 (286-344)||(45190259-45190317)
chr1 (281-335)||(46334783-46334837)
chr1 (286-319)||(2817388-2817421)
chr1 (286-335)||(3693795-3693844)
chr1 (296-333)||(4806796-4806833)
chr1 (297-342)||(7996681-7996726)
chr1 (281-318)||(10292944-10292981)
chr1 (286-335)||(13401610-13401659)
chr1 (290-343)||(29798107-29798160)
chr1 (286-319)||(41926835-41926868)
chr1 (292-333)||(42860126-42860167)
chr1 (294-335)||(43356456-43356497)
[»] chr2 (42 HSPs)
chr2 (281-333)||(40967372-40967424)
chr2 (281-334)||(3904210-3904263)
chr2 (286-335)||(5028869-5028918)
chr2 (287-344)||(12413507-12413564)
chr2 (287-344)||(12425567-12425624)
chr2 (292-345)||(19156153-19156206)
chr2 (283-332)||(41939110-41939159)
chr2 (287-350)||(33832653-33832716)
chr2 (286-337)||(43117187-43117238)
chr2 (281-335)||(9547408-9547462)
chr2 (286-348)||(10332261-10332323)
chr2 (286-344)||(24393258-24393316)
chr2 (294-344)||(32407553-32407603)
chr2 (286-331)||(3196573-3196618)
chr2 (286-319)||(44868432-44868465)
chr2 (292-344)||(7640677-7640729)
chr2 (281-317)||(17842729-17842765)
chr2 (296-340)||(22608550-22608594)
chr2 (297-337)||(27889313-27889353)
chr2 (292-332)||(42451452-42451492)
chr2 (296-335)||(12126892-12126931)
chr2 (297-344)||(18611953-18612000)
chr2 (286-341)||(44926394-44926449)
chr2 (286-320)||(2429029-2429063)
chr2 (281-319)||(16204832-16204870)
chr2 (286-344)||(20120711-20120769)
chr2 (281-335)||(22267521-22267574)
chr2 (286-344)||(25186232-25186290)
chr2 (286-344)||(28163940-28163998)
chr2 (286-336)||(28202310-28202360)
chr2 (286-332)||(30263275-30263321)
chr2 (297-350)||(30799074-30799125)
chr2 (296-350)||(31048300-31048354)
chr2 (286-344)||(34903530-34903588)
chr2 (289-335)||(42181302-42181348)
chr2 (286-320)||(44488024-44488058)
chr2 (292-345)||(2264816-2264869)
chr2 (281-334)||(4897551-4897604)
chr2 (281-334)||(4944945-4944998)
chr2 (286-319)||(5980240-5980273)
chr2 (286-331)||(25603914-25603959)
chr2 (286-319)||(39761451-39761484)
[»] chr8 (24 HSPs)
chr8 (281-351)||(29924900-29924970)
chr8 (292-345)||(27044879-27044932)
chr8 (281-345)||(3102316-3102380)
chr8 (286-350)||(5880968-5881031)
chr8 (292-344)||(8720031-8720083)
chr8 (281-335)||(30071515-30071569)
chr8 (281-334)||(13272522-13272575)
chr8 (297-345)||(1230650-1230698)
chr8 (281-317)||(20284926-20284962)
chr8 (281-317)||(21071555-21071591)
chr8 (281-336)||(13284263-13284318)
chr8 (286-333)||(17704026-17704073)
chr8 (297-336)||(18422451-18422490)
chr8 (283-350)||(19260563-19260630)
chr8 (286-333)||(26991758-26991805)
chr8 (297-344)||(33445594-33445641)
chr8 (281-319)||(19701359-19701397)
chr8 (287-324)||(38535083-38535121)
chr8 (286-319)||(6038290-6038323)
chr8 (295-336)||(7433162-7433203)
chr8 (281-330)||(8442491-8442540)
chr8 (286-335)||(28439972-28440021)
chr8 (286-319)||(30874733-30874766)
chr8 (290-335)||(32944942-32944987)
[»] chr7 (33 HSPs)
chr7 (281-335)||(3584212-3584266)
chr7 (288-328)||(40854936-40854976)
chr7 (286-328)||(43982087-43982129)
chr7 (281-350)||(6384859-6384928)
chr7 (281-350)||(40187620-40187689)
chr7 (295-335)||(7388038-7388078)
chr7 (281-333)||(21928119-21928171)
chr7 (295-331)||(34897532-34897568)
chr7 (286-350)||(35142133-35142197)
chr7 (292-332)||(42227807-42227847)
chr7 (286-350)||(46987099-46987163)
chr7 (286-333)||(5458072-5458119)
chr7 (281-328)||(10362310-10362357)
chr7 (296-335)||(27279402-27279441)
chr7 (281-320)||(34000270-34000309)
chr7 (286-333)||(46659396-46659443)
chr7 (286-316)||(8227362-8227392)
chr7 (281-319)||(15015249-15015287)
chr7 (297-335)||(16971020-16971058)
chr7 (294-332)||(36755035-36755073)
chr7 (294-332)||(36760832-36760870)
chr7 (286-328)||(37451243-37451285)
chr7 (281-350)||(2916110-2916179)
chr7 (281-350)||(10236889-10236958)
chr7 (281-322)||(19684224-19684265)
chr7 (286-319)||(22777374-22777407)
chr7 (286-319)||(27833416-27833449)
chr7 (292-321)||(30059538-30059567)
chr7 (295-324)||(38454024-38454053)
chr7 (286-343)||(39926529-39926586)
chr7 (283-312)||(44797361-44797390)
chr7 (286-335)||(45151390-45151439)
chr7 (286-319)||(48527203-48527236)
[»] chr3 (24 HSPs)
chr3 (286-344)||(45096039-45096097)
chr3 (286-344)||(55126019-55126077)
chr3 (286-343)||(30200839-30200896)
chr3 (286-324)||(5117221-5117259)
chr3 (283-333)||(21245803-21245853)
chr3 (296-350)||(22843487-22843541)
chr3 (281-322)||(22462320-22462361)
chr3 (286-350)||(29631199-29631263)
chr3 (286-342)||(35191809-35191865)
chr3 (288-324)||(41822136-41822172)
chr3 (286-322)||(45254244-45254280)
chr3 (296-344)||(48688137-48688185)
chr3 (281-332)||(40715339-40715390)
chr3 (281-320)||(53221966-53222005)
chr3 (286-341)||(54230092-54230147)
chr3 (281-319)||(7827516-7827554)
chr3 (281-319)||(7829904-7829942)
chr3 (286-320)||(31085021-31085055)
chr3 (297-331)||(43630421-43630455)
chr3 (286-319)||(4216414-4216447)
chr3 (286-331)||(33404241-33404286)
chr3 (281-350)||(38573557-38573626)
chr3 (283-316)||(41087581-41087614)
chr3 (288-333)||(53162213-53162258)
[»] chr6 (26 HSPs)
chr6 (281-350)||(404171-404240)
chr6 (292-344)||(3808108-3808160)
chr6 (288-335)||(3274016-3274063)
chr6 (281-344)||(9333970-9334033)
chr6 (299-350)||(35110080-35110131)
chr6 (296-333)||(1989044-1989081)
chr6 (292-341)||(10497145-10497194)
chr6 (286-323)||(12204382-12204419)
chr6 (286-335)||(24623316-24623365)
chr6 (281-333)||(2617206-2617258)
chr6 (283-335)||(19554163-19554215)
chr6 (288-344)||(29431474-29431530)
chr6 (292-344)||(30374522-30374574)
chr6 (286-333)||(8138459-8138506)
chr6 (281-324)||(15291700-15291743)
chr6 (283-333)||(884070-884120)
chr6 (281-319)||(1794966-1795004)
chr6 (286-336)||(14945511-14945561)
chr6 (286-324)||(28046188-28046226)
chr6 (281-319)||(28898864-28898902)
chr6 (296-333)||(331887-331924)
chr6 (288-333)||(9923255-9923300)
chr6 (286-319)||(18256896-18256929)
chr6 (286-335)||(29069496-29069545)
chr6 (281-334)||(31971537-31971590)
chr6 (286-319)||(33824894-33824927)
[»] scaffold0328 (1 HSPs)
scaffold0328 (292-350)||(3333-3391)
[»] scaffold1619 (1 HSPs)
scaffold1619 (296-344)||(1054-1102)
[»] scaffold0182 (1 HSPs)
scaffold0182 (281-332)||(17773-17824)
[»] scaffold0024 (1 HSPs)
scaffold0024 (287-350)||(104768-104831)
[»] scaffold0565 (1 HSPs)
scaffold0565 (292-330)||(6972-7010)
[»] scaffold0009 (1 HSPs)
scaffold0009 (296-350)||(65096-65150)
[»] scaffold0350 (1 HSPs)
scaffold0350 (286-319)||(1261-1294)
[»] scaffold0334 (1 HSPs)
scaffold0334 (295-336)||(5204-5245)
[»] scaffold0238 (1 HSPs)
scaffold0238 (281-350)||(25397-25466)


Alignment Details
Target: chr5 (Bit Score: 294; Significance: 1e-165; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 426 - 815
Target Start/End: Complemental strand, 27244480 - 27244084
Alignment:
Q  426 gttcctctaacaaatgtataaattaattttatacttatatcaaattaaaatatgtcattgattcatatcacaccttttctttaaacacaagatgtttctt 525  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27244480 gttcctctaaaaaatgtataaattaattttatacttatatcaaattaaaatatgtcattgcttcatatcacaccttttctttaaacacaagatgtttctt 27244381  T
Q  526 gaaaacaaaactatattacaaacaaaaggtataataaaagctaaaagagcgatgttatttcaagcgaattatagcatcac-gatgtaaagtgaatcatct 624  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  27244380 gaaaacaaaactatattacaaacaaaaggtataataaaaactaaaagagcgatgttatttcaagcgaattatagcatcacaaatgtaaagtgaatcatct 27244281  T
Q  625 atgaccattagatttgctcttgagagcaaaacatgggtggagtg--------gttgtaaaggcccacagaagctatagtaacaatacatttgtttgctat 716  Q
    ||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||| ||  | |||||||||||||||||||||| |||||    
T  27244280 atgaccattagatttgctcttgagagcaaaacatgggtggagtggatgtaaagttgtaaaggccc-caacaactatagtaacaatacatttgttcgctat 27244182  T
Q  717 ctttcacgaaattattttcgttaaatacaacattttcgaaacataaaacaccatcaccaccacaggcccatacaaaaaagacaaccattaaaaaaccaa 815  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||| |||| ||||||    
T  27244181 ctttcacgaaattattttcgttatatacaacattttcgaaacataaaacaccataaccaccacagg-ctatacaaaaaagacaaccactaaacaaccaa 27244084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 8 - 365
Target Start/End: Complemental strand, 27244898 - 27244541
Alignment:
Q  8 cttctacaatgtttgctacttgttctgcgttttctattgttgtttcaactttctctacgcacaaagaatgaataatttgtgtaagatttttctatttatt 107  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||    
T  27244898 cttccacaatgtttgctacttgttctgctttttctattgttgtttcaactttctctacacacaaagaatgaatattttgt--aagatttttctatttatt 27244801  T
Q  108 tttgaagaattatggttgattattaaacaaccaaagaaattattaatcgcctaagtaaagtggtaccaccaataagactagtgtgactaatttctatcga 207  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  27244800 tttgaaggattatggttgattattaaacaaccaaagaaattattagtcgcctaagtaaagtggtaccaccaataagactagtgtggctaatttctattga 27244701  T
Q  208 ttgttgaataaattatccacaatttctgaaggtgtcgcctcnnnnnnnagttcaaggtatcaccatctccgtgaacttagttgataaggacaatgcata- 306  Q
    ||||||||||||||||||| |||||||||||||||||||||       ||||||||| |||||  || ||||||| |||||||||||||||||| ||||     
T  27244700 ttgttgaataaattatccataatttctgaaggtgtcgcctctttttttagttcaaggcatcactgtccccgtgaaattagttgataaggacaatacataa 27244601  T
Q  307 -atatatgtaaggtttgagattcaaaccccagacaccacccaaaagtacaaggtatcacc 365  Q
     |||||| |||| |||||||||| || ||| ||||||||| | |||||||||||||||||    
T  27244600 tatatatataagatttgagattcgaatcccggacaccaccaataagtacaaggtatcacc 27244541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 21657437 - 21657388
Alignment:
Q  295 ggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  21657437 ggacaatgcataatatatgtaaggtttgaggttcaaacctcagacaccac 21657388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 351
Target Start/End: Complemental strand, 23118104 - 23118034
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaag 351  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||| ||| |  ||||||||| |||||    
T  23118104 aactcagttgataaggacaatgcataatatatgtaaggtttggggttcgaactctggacaccaccaaaaag 23118034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 27651583 - 27651544
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtt 320  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  27651583 aacttagttggtaaggacaatgcataatatatgtaaggtt 27651544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 4432124 - 4432162
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  4432124 aactcagttgataaggacaatgcataatatatgtaaggt 4432162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 350
Target Start/End: Original strand, 7216819 - 7216881
Alignment:
Q  288 ttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    ||||||||||| ||| |||||||||||||||| || |||||||| | ||||||||||| ||||    
T  7216819 ttgataaggacgatgaataatatatgtaaggtatgtgattcaaatctcagacaccaccaaaaa 7216881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 29695023 - 29695077
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||| |||||||| |||||||||||||||||||||||||| | | ||||||||||    
T  29695023 aactcagttgatatggacaatgcataatatatgtaaggttcgtggttcaaacccc 29695077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 40445991 - 40446041
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaa 331  Q
    |||| |||||||||||||||||||||||||||| ||||| |||| ||||||    
T  40445991 aactcagttgataaggacaatgcataatatatgcaaggtctgaggttcaaa 40446041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 689555 - 689611
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccag 337  Q
    |||| |||||||| |||||||| |||||||||||||| |||||  ||||||||||||    
T  689555 aactcagttgatatggacaatgtataatatatgtaagatttgatgttcaaaccccag 689611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 3052200 - 3052252
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||| |||||||||||||||||||||||| | |||||| ||||| ||||||    
T  3052200 taaggataatgcataatatatgtaaggtttggggttcaaatcccagccaccac 3052252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 41630158 - 41630102
Alignment:
Q  288 ttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||| ||||||||||||||||||| |||||| | |||||||||||| | ||||||    
T  41630158 ttgatagggacaatgcataatatatgcaaggttcgggattcaaaccccggtcaccac 41630102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 42168993 - 42168934
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 345  Q
    ||||| ||||||||||||||| |||||| ||||| || | ||| ||||||||||||||||    
T  42168993 agttggtaaggacaatgcatagtatatgcaaggtctggggttcgaaccccagacaccacc 42168934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 7070925 - 7070963
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  7070925 aacttagttgatacagacaatgcataatatatgtaaggt 7070963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 8545042 - 8545004
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  8545042 aactcagttgataaggacaatgcataatatatgcaaggt 8545004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 31602862 - 31602824
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  31602862 acaatgcataatatatgcaaggttcgagattcaaacccc 31602824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 42964522 - 42964556
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtt 320  Q
    ||||||||||||||||| |||||||||||||||||    
T  42964522 agttgataaggacaatgtataatatatgtaaggtt 42964556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 2951409 - 2951361
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 341  Q
    ||||||||||||||||||||||||||| ||||| ||| ||||| ||||||    
T  2951409 taaggacaatgcataatatatgtaagg-ttgaggttcgaaccctagacac 2951361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 5846042 - 5846099
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacacca 343  Q
    ||||| |||||||||||||||||||||| || || || | |||||||||| |||||||    
T  5846042 agttggtaaggacaatgcataatatatgcaaagtctggggttcaaaccccggacacca 5846099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 11647205 - 11647246
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttg 322  Q
    |||| ||||| |||||||||||||||||||||| ||||||||    
T  11647205 aactcagttggtaaggacaatgcataatatatgcaaggtttg 11647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 350
Target Start/End: Original strand, 22498950 - 22499018
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||| ||||| |||||||||||||||||||||| ||||| || | ||| |||||| ||||||| ||||||    
T  22498950 aactcagttggtaaggacaatgcataatatatgcaaggtctg-ggttcgaaccccggacaccatccaaaa 22499018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 324
Target Start/End: Complemental strand, 42854359 - 42854330
Alignment:
Q  295 ggacaatgcataatatatgtaaggtttgag 324  Q
    ||||||||||||||||||||||||||||||    
T  42854359 ggacaatgcataatatatgtaaggtttgag 42854330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 46434808 - 46434762
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  46434808 agttgataaggacaatgcataatatatgtaaggtttgaggttcaaac 46434762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 39842065 - 39842016
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaa 330  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  39842065 aactcagttgataaggacaatgcataatatatgtaaggtttgaggttcaa 39842016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 9783909 - 9783976
Alignment:
Q  283 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    ||||||||||| ||||||||||||||||||||||||| |||| |||||||| | | ||||||| ||||    
T  9783909 cttagttgatatggacaatgcataatatatgtaaggtctgaggttcaaacctcggccaccaccaaaaa 9783976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 1657072 - 1657020
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||||||||||||||||||||||||||||| | ||| ||||| |||||||||    
T  1657072 taaggacaatgcataatatatgtaaggtttggggttcgaacccaagacaccac 1657020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 29568605 - 29568657
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||||||||||||||||||||||||||  ||| ||| |||||||||||||||    
T  29568605 taaggacaatgcataatatatgtaaggtccgaggttcgaaccccagacaccac 29568657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 54677240 - 54677284
Alignment:
Q  288 ttgataaggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  54677240 ttgatatggacaatgcataatatatgtaaggttcgagattcaaac 54677284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 56096212 - 56096272
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 341  Q
    |||| ||||||||||||||||||||||||||||||||||| | | ||||||| ||| ||||    
T  56096212 aactcagttgataaggacaatgcataatatatgtaaggttcgtggttcaaactccaaacac 56096272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 350
Target Start/End: Original strand, 11269702 - 11269771
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||||||||| |||||||||| ||||||||||| ||||| |  | ||| |||||||||||||||| ||||    
T  11269702 aacttagttggtaaggacaatacataatatatgcaaggtcttgggttcgaaccccagacaccaccaaaaa 11269771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 350
Target Start/End: Complemental strand, 34595989 - 34595920
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||| ||||| ||||||||||||||||||||||||| ||| | | ||  |||||||||||||||| ||||    
T  34595989 aactcagttggtaaggacaatgcataatatatgtaaagttcggggtttgaaccccagacaccaccaaaaa 34595920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 350
Target Start/End: Complemental strand, 43034395 - 43034326
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||| ||||| || ||||||||||||||||||| ||||| |||| |||||||||| | ||||||| ||||    
T  43034395 aactcagttggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccaccaccaaaaa 43034326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Complemental strand, 50650974 - 50650941
Alignment:
Q  287 gttgataaggacaatgcataatatatgtaaggtt 320  Q
    ||||||||||||||||||||||||||||||||||    
T  50650974 gttgataaggacaatgcataatatatgtaaggtt 50650941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 16703031 - 16703079
Alignment:
Q  288 ttgataaggacaatgcataatatatgtaaggtttgagattcaaacccca 336  Q
    |||||| ||| |||| |||||||||||||||| ||||||||||||||||    
T  16703031 ttgatatggataatgaataatatatgtaaggtatgagattcaaacccca 16703079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 21465630 - 21465662
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgag 324  Q
    |||||||||||||||||||||||||||||||||    
T  21465630 taaggacaatgcataatatatgtaaggtttgag 21465662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 28435296 - 28435232
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    ||||| || ||||||||||||||||||| |||||| | | |||||||||||| ||||||| ||||    
T  28435296 agttggtatggacaatgcataatatatgcaaggttcggggttcaaaccccagccaccaccaaaaa 28435232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 874467 - 874506
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtt 320  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  874467 aacttagttgatatggacaatgcataatatatataaggtt 874506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 336
Target Start/End: Complemental strand, 3299131 - 3299092
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaacccca 336  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  3299131 acaatgcataatatatgcaaggtttgaggttcaaacccca 3299092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 332
Target Start/End: Complemental strand, 12192528 - 12192493
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaac 332  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12192528 acaatgcataatatatgcaaggtttgagattcaaac 12192493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 333
Target Start/End: Original strand, 37735810 - 37735849
Alignment:
Q  294 aggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  37735810 aggacaatgcataatatatgtaaggtctgaggttcaaacc 37735849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 285 - 320
Target Start/End: Original strand, 47016630 - 47016665
Alignment:
Q  285 tagttgataaggacaatgcataatatatgtaaggtt 320  Q
    |||||||||| |||||||||||||||||||||||||    
T  47016630 tagttgataaagacaatgcataatatatgtaaggtt 47016665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 54587908 - 54587955
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattc 328  Q
    |||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  54587908 aactcagttgatatggataatgcataatatatgtaaggtttgggattc 54587955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 6459977 - 6459939
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  6459977 aactcagttgatatggacaatgcataatatatgtaaggt 6459939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 12439677 - 12439711
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtt 320  Q
    |||||||||||||||||||||||||||| ||||||    
T  12439677 agttgataaggacaatgcataatatatgcaaggtt 12439711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 17216177 - 17216119
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||||||| | ||||||||||||||| ||||| |||  ||| |||||||||||||||    
T  17216177 agttgataagaataatgcataatatatgcaaggtctgaagttcgaaccccagacaccac 17216119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 36071157 - 36071191
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtt 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  36071157 agttggtaaggacaatgcataatatatgtaaggtt 36071191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 42756154 - 42756120
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtt 320  Q
    |||||||||||||||||||||||||||| ||||||    
T  42756154 agttgataaggacaatgcataatatatgcaaggtt 42756120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 292 - 322
Target Start/End: Complemental strand, 45029647 - 45029617
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttg 322  Q
    |||||||||||||||||||||||||||||||    
T  45029647 taaggacaatgcataatatatgtaaggtttg 45029617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 56551640 - 56551582
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||| |||||||||||||||||||||| |||||  ||| |||||||||| | ||||||    
T  56551640 agttggtaaggacaatgcataatatatgcaaggtccgaggttcaaaccccggccaccac 56551582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 10564513 - 10564464
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    ||||| || ||||||| ||||||||||||||||| |||| ||||||||||    
T  10564513 agttggtatggacaatacataatatatgtaaggtctgaggttcaaacccc 10564464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 11166696 - 11166757
Alignment:
Q  283 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||||| ||||||||||| |||||||||| ||||| | || ||| |||||| ||||||||    
T  11166696 cttagttggtaaggacaatgtataatatatgcaaggtctaaggttcgaaccccggacaccac 11166757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 11286819 - 11286782
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  11286819 gacaatgcataatatatgcaaggtctgagattcaaacc 11286782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 12263265 - 12263310
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaa 331  Q
    |||||| |||||||||| |||||||||||||||| |||| ||||||    
T  12263265 agttgacaaggacaatgtataatatatgtaaggtctgaggttcaaa 12263310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 29808316 - 29808283
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||||||||||||||||||||| |||||    
T  29808316 agttgataaggacaatgcataatatatgcaaggt 29808283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 36203249 - 36203282
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||||||||||||||||||||| |||||    
T  36203249 agttgataaggacaatgcataatatatgcaaggt 36203282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 10841908 - 10841962
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  10841908 aactcagttgatatggacaatgcataatatatataaggtttgagattcaaacccc 10841962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 22388228 - 22388177
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  22388228 aacttagttgatagggacaatgcataatatatgtaacgttcgagattcaaac 22388177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 41974774 - 41974832
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||||| ||| ||||||||||||||| |||||||||| |||||||||| | ||||||    
T  41974774 agttgatagggataatgcataatatatgcaaggtttgaggttcaaaccccggccaccac 41974832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 332
Target Start/End: Complemental strand, 16967245 - 16967196
Alignment:
Q  283 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    ||||||||||| ||||||||||||||||||| |||||| ||| |||||||    
T  16967245 cttagttgatatggacaatgcataatatatgcaaggttcgaggttcaaac 16967196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 17917186 - 17917137
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||||| ||||||||||||| |||||||||||| | ||||||||||||    
T  17917186 agttgatatggacaatgcataaaatatgtaaggttcgggattcaaacccc 17917137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 33020082 - 33020033
Alignment:
Q  295 ggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||||||||||||||||| ||||| |||| |||||||||||| ||||||    
T  33020082 ggacaatgcataatatatgcaaggtctgaggttcaaaccccagccaccac 33020033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 33175271 - 33175332
Alignment:
Q  283 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||| |||||| ||||||||||||||||||||||||| |||| |||||| | ||| ||||||    
T  33175271 cttaattgatatggacaatgcataatatatgtaaggtatgaggttcaaatctcagccaccac 33175332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 35632912 - 35632957
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaa 331  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||||    
T  35632912 agttgatatggacaatgcataatatatataaggtttgaggttcaaa 35632957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 3248785 - 3248825
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggttt 321  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  3248785 aacttagttggtatggacaatgcataatatatgtaaggttt 3248825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 353
Target Start/End: Complemental strand, 9398466 - 9398394
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaagta 353  Q
    |||| ||||| |||| ||||||||| ||||||||||||| || | ||| ||||||||||| |||| |||||||    
T  9398466 aactcagttggtaagaacaatgcatgatatatgtaaggtctggggttcgaaccccagacaacaccaaaaagta 9398394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 9872153 - 9872089
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    ||||| |||||| ||||||||||||||| |||||||| | ||| ||||||||||| |||| ||||    
T  9872153 agttggtaaggataatgcataatatatgcaaggtttgcggttcgaaccccagacagcaccaaaaa 9872089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 19262955 - 19262891
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||||||||||||||||||||| ||||| || ||| | | ||| |||||||||||||||| ||||    
T  19262955 agttgataaggacaatgcataacatatgcaaagttcggggttcgaaccccagacaccaccaaaaa 19262891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 29701373 - 29701337
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaag 317  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29701373 aacttagttgatatggacaatgcataatatatgtaag 29701337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 34083356 - 34083408
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||| |||||||||||||||||||||||||| | ||| |||||||| ||||||    
T  34083356 taagaacaatgcataatatatgtaaggtttggggttcgaaccccagccaccac 34083408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 6000196 - 6000133
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||| ||||| | |||||||||||||||||||| |||||  ||| |||||||||| ||||||||    
T  6000196 aactcagttggttaggacaatgcataatatatgcaaggtccgaggttcaaaccccggacaccac 6000133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 322
Target Start/End: Complemental strand, 19533229 - 19533190
Alignment:
Q  283 cttagttgataaggacaatgcataatatatgtaaggtttg 322  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  19533229 cttagttgataaggacaatgcataatatatgcaagatttg 19533190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 30548144 - 30548105
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtt 320  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  30548144 aacttagttggtaaggacaatgcataatatatgcaaggtt 30548105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 316
Target Start/End: Original strand, 31962455 - 31962490
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaa 316  Q
    |||||||||| |||||||||||||||||||||||||    
T  31962455 aacttagttggtaaggacaatgcataatatatgtaa 31962490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 33153933 - 33153870
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||| ||||| || |||||||||||||||||||||||||  ||| ||||||||||  |||||||    
T  33153933 aactcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaaccccgaacaccac 33153870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 43843899 - 43843938
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtt 320  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  43843899 aacttagttggtaaggacaatgcataatatatgcaaggtt 43843938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 3157754 - 3157700
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaag 351  Q
    ||||||||||||||||  |||||||||| |||||||||||  ||||||| |||||    
T  3157754 acaatgcataatatatacaaggtttgaggttcaaaccccaaccaccaccaaaaag 3157700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 22335378 - 22335420
Alignment:
Q  293 aaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||    
T  22335378 aaggacaatgcataatatatgcaaggtctgaggttcaaacccc 22335420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 23405411 - 23405373
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  23405411 aacttagttgttaaggacaatgcataatatatgcaaggt 23405373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 45190317 - 45190259
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||| || ||||||||||||||||||| |||||| | ||||||||||| || ||||||    
T  45190317 agttggtatggacaatgcataatatatgcaaggttcgggattcaaaccctagccaccac 45190259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 46334783 - 46334837
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||| |||||||||| ||||||||||| ||||  ||||| |||||||||||||||    
T  46334783 aactcagttgataagaacaatgcataaaatatacaaggtctgagattcaaacccc 46334837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 2817421 - 2817388
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  2817421 agttggtaaggacaatgcataatatatgtaaggt 2817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 3693844 - 3693795
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    ||||||||  ||||| |||||||||||||||||| |||| ||||||||||    
T  3693844 agttgatatagacaaagcataatatatgtaaggtctgaggttcaaacccc 3693795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 4806833 - 4806796
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  4806833 gacaatgtataatatatgtaaggtttgaggttcaaacc 4806796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 342
Target Start/End: Complemental strand, 7996726 - 7996681
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaaccccagacacc 342  Q
    |||||||||||||||||||| ||||||| |||||||| | ||||||    
T  7996726 acaatgcataatatatgtaaagtttgaggttcaaacctcggacacc 7996681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 10292944 - 10292981
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaagg 318  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  10292944 aactcagttgatagggacaatgcataatatatgtaagg 10292981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 13401610 - 13401659
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    ||||||||  ||||||||||||||||||||||||| | | ||||||||||    
T  13401610 agttgatagagacaatgcataatatatgtaaggttcggggttcaaacccc 13401659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 29798160 - 29798107
Alignment:
Q  290 gataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacacca 343  Q
    |||||| ||||||||||||||||||||||| || | ||| ||| ||||||||||    
T  29798160 gataagaacaatgcataatatatgtaaggtctggggttcgaacaccagacacca 29798107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 41926835 - 41926868
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  41926835 agttggtaaggacaatgcataatatatgtaaggt 41926868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 42860126 - 42860167
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||| |||||||||||||||||||||||| | ||||||||||    
T  42860126 taagaacaatgcataatatatgtaaggttcgggattcaaacc 42860167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 43356456 - 43356497
Alignment:
Q  294 aggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||||||||||||||||||||||||||   ||||||||||    
T  43356456 aggacaatgcataatatatgtaaggtttggagttcaaacccc 43356497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 40967424 - 40967372
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||| |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  40967424 aactcagttgataaggacaatgcataatatatgcaaggtttgaggttcaaacc 40967372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 3904210 - 3904263
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 334  Q
    ||||||||||||| ||||||||||||||||||||||||| || | |||||||||    
T  3904210 aacttagttgatagggacaatgcataatatatgtaaggtctggggttcaaaccc 3904263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 5028869 - 5028918
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    ||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  5028869 agttgattaggacaatgcataatatatgtaaggtttggggttcaaacccc 5028918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 12413507 - 12413564
Alignment:
Q  287 gttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||  |||||||    
T  12413507 gttgataaggacaatgcataatatatgcaaggtctgaggttcaaaccccgtacaccac 12413564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 12425567 - 12425624
Alignment:
Q  287 gttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||  |||||||    
T  12425567 gttgataaggacaatgcataatatatgcaaggtctgaggttcaaaccccgtacaccac 12425624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 19156206 - 19156153
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 345  Q
    |||||||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  19156206 taaggacagtacataatatatgcaaggtttgaggttcaaaccccagacaccacc 19156153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 283 - 332
Target Start/End: Complemental strand, 41939159 - 41939110
Alignment:
Q  283 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    |||||||| || ||| ||||||||||||||||||||||||||||||||||    
T  41939159 cttagttggtagggataatgcataatatatgtaaggtttgagattcaaac 41939110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 33832716 - 33832653
Alignment:
Q  287 gttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||| ||| ||||||||||||||||||||| || |||||||| ||| |||||||||||| ||||    
T  33832716 gttggtaacgacaatgcataatatatgtaatgtctgagattcgaactccagacaccaccaaaaa 33832653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 43117238 - 43117187
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccag 337  Q
    ||||| |||||||||||||||||||||| ||||| |||| ||||||||||||    
T  43117238 agttggtaaggacaatgcataatatatgcaaggtctgaggttcaaaccccag 43117187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 9547462 - 9547408
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||| |||||||| ||||||||||||||||||| |||||||| | ||||||||||    
T  9547462 aactcagttgatatggacaatgcataatatatgcaaggtttggggttcaaacccc 9547408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 10332323 - 10332261
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaa 348  Q
    |||||||||||||||||||||||||||| |||||  ||| |||||| ||| | ||||||||||    
T  10332323 agttgataaggacaatgcataatatatggaaggtcggaggttcaaaaccccgccaccacccaa 10332261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 24393258 - 24393316
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||| |||||||||||||||||||||| ||||| |||| ||| |||||| ||||||||    
T  24393258 agttgttaaggacaatgcataatatatgcaaggtctgaggttcgaaccccggacaccac 24393316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 32407603 - 32407553
Alignment:
Q  294 aggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||||| |||||||||||||||||||||| |||||||| ||| ||||||    
T  32407603 aggacaatacataatatatgtaaggtttgaggttcaaacctcagccaccac 32407553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 3196573 - 3196618
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaa 331  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||    
T  3196573 agttgatatgaacaatgcataatatatgtaaggttcgagattcaaa 3196618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 44868432 - 44868465
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    ||||||||||||||||||||||||||||||||||    
T  44868432 agttgataaggacaatgcataatatatgtaaggt 44868465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 7640677 - 7640729
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||||||| ||||||||||||||||  |||| ||| |||||||||||||||    
T  7640677 taaggacaatacataatatatgtaaggcctgaggttcgaaccccagacaccac 7640729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 17842765 - 17842729
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaag 317  Q
    ||||||||||||||| |||||||||||||||||||||    
T  17842765 aacttagttgataagaacaatgcataatatatgtaag 17842729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 296 - 340
Target Start/End: Original strand, 22608550 - 22608594
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaaccccagaca 340  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||    
T  22608550 gacaatgcataatatatgcaaggtatgaggttcaaaccccagaca 22608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 27889313 - 27889353
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaaccccag 337  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  27889313 acaatgcataaaatatgtaaggtttgaggttcaaaccccag 27889353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 42451452 - 42451492
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  42451452 taaggacactgcataatatatgtaaggtttgaggttcaaac 42451492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 12126892 - 12126931
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  12126892 gacaatacataatatatgtaaggtttgaggttcaaacccc 12126931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 18612000 - 18611953
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  18612000 acaatgcataatatatgcaaggtttggggttcaaacctcagacaccac 18611953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 44926449 - 44926394
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 341  Q
    ||||| ||| |||||||||| ||||||||||||| || |||| |||||||||||||    
T  44926449 agttggtaaagacaatgcattatatatgtaaggtctgggatttaaaccccagacac 44926394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 2429029 - 2429063
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtt 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  2429029 agttggtaaggacaatgcataatatatgtaaggtt 2429063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 16204870 - 16204832
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  16204870 aactcagttgataaggacaatgcataatatatgcaaggt 16204832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 20120769 - 20120711
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||| |||||||||||||||||||||| |||||| | | |||||| ||| ||||||||    
T  20120769 agttggtaaggacaatgcataatatatgcaaggttcggggttcaaatcccggacaccac 20120711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 22267521 - 22267574
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||| ||||| || ||||||||||||||||||| |||||||||| ||||||||||    
T  22267521 aactcagttggtacggacaatgcataatatatgcaaggtttgag-ttcaaacccc 22267574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 25186290 - 25186232
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||||| ||||||||||||||||||| |||||  | | |||||||||||| ||||||    
T  25186290 agttgatatggacaatgcataatatatgcaaggtccggggttcaaaccccagccaccac 25186232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 28163940 - 28163998
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||||||||||||||||||||| ||| | ||| |||| ||| || ||||||||||||    
T  28163940 agttgataaggacaatgcataatacatgcacggtctgaggttcgaatcccagacaccac 28163998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 28202310 - 28202360
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccca 336  Q
    |||||||| |||||||||||||||||||||||||  ||  |||||||||||    
T  28202310 agttgatagggacaatgcataatatatgtaaggtccgaagttcaaacccca 28202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 30263275 - 30263321
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    ||||| |||||||||| ||||||||||| || |||||||||||||||    
T  30263275 agttggtaaggacaatccataatatatgcaatgtttgagattcaaac 30263321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 30799125 - 30799074
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    ||||||||||||||||||||||| |  | |||||||||||| ||||||||||||    
T  30799125 acaatgcataatatatgtaaggtct--ggttcaaaccccagccaccacccaaaa 30799074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 296 - 350
Target Start/End: Complemental strand, 31048354 - 31048300
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    ||||||||||| |||||| |||||| ||||||| |||||| ||||||||| ||||    
T  31048354 gacaatgcatattatatgcaaggttcgagattcgaaccccggacaccaccaaaaa 31048300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 34903530 - 34903588
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||| |||||||| ||||||||||||| ||||| |||| ||| |||||| ||||||||    
T  34903530 agttggtaaggacagtgcataatatatgcaaggtctgaggttcgaaccccggacaccac 34903588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 42181348 - 42181302
Alignment:
Q  289 tgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||| |||||||||| ||||||| |||||| ||||||||||||||    
T  42181348 tgataaagacaatgcatgatatatgcaaggttcgagattcaaacccc 42181302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 44488058 - 44488024
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtt 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  44488058 agttggtaaggacaatgcataatatatgtaaggtt 44488024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 2264816 - 2264869
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 345  Q
    |||||| |||||||||||||||||||||||| | ||| |||||  |||||||||    
T  2264816 taaggaaaatgcataatatatgtaaggtttggggttcgaaccctggacaccacc 2264869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 4897551 - 4897604
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 334  Q
    |||| ||||| |||||||||||||||||||||| |||||||  | |||||||||    
T  4897551 aactcagttggtaaggacaatgcataatatatgcaaggtttatggttcaaaccc 4897604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 4944945 - 4944998
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 334  Q
    |||| ||||| |||||||||||||||||||||| |||||||  | |||||||||    
T  4944945 aactcagttggtaaggacaatgcataatatatgcaaggtttatggttcaaaccc 4944998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 5980240 - 5980273
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||||||||||||||||||||| |||||    
T  5980240 agttgataaggacaatgcataatatatgcaaggt 5980273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 25603959 - 25603914
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaa 331  Q
    |||||||| |||||||||||||||||| ||||||||| | ||||||    
T  25603959 agttgatagggacaatgcataatatatataaggtttggggttcaaa 25603914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 39761451 - 39761484
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||||||||||||||||||||| |||||    
T  39761451 agttgataaggacaatgcataatatatgcaaggt 39761484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 351
Target Start/End: Complemental strand, 29924970 - 29924900
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaag 351  Q
    |||||||||| |||| ||||||||||||||||| |||||| | | || ||||||||||||||||| |||||    
T  29924970 aacttagttgttaagaacaatgcataatatatgcaaggttcggggtttaaaccccagacaccaccaaaaag 29924900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 27044932 - 27044879
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 345  Q
    |||||||||| ||||||||||||||||| |||| |||||||||| |||||||||    
T  27044932 taaggacaattcataatatatgtaaggtctgaggttcaaaccccggacaccacc 27044879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 3102316 - 3102380
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 345  Q
    |||||| |||| ||| |||||| ||||||||||||||||||||| ||| |||| |||||||||||    
T  3102316 aacttaattgacaagaacaatgtataatatatgtaaggtttgaggttcgaacctcagacaccacc 3102380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 5881031 - 5880968
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||| || |||||||| ||||    
T  5881031 agttgataag-acaatgcataatatatacaaggtttgagattcaaacctcaaacaccaccaaaaa 5880968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 8720083 - 8720031
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||| |||||||||||||||||||||||||||  || ||||||||||||||||    
T  8720083 taagaacaatgcataatatatgtaaggtttgaagttaaaaccccagacaccac 8720031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 30071569 - 30071515
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    ||||||||||||||| ||||||||||||||||  |||||||||| ||| ||||||    
T  30071569 aacttagttgataagaacaatgcataatatatacaaggtttgaggttctaacccc 30071515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 334
Target Start/End: Complemental strand, 13272575 - 13272522
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 334  Q
    |||| |||||||| |||||||||||||||||||||| || ||||||| ||||||    
T  13272575 aactcagttgatatggacaatgcataatatatgtaatgtctgagatttaaaccc 13272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 1230698 - 1230650
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 345  Q
    |||||||||||||||||||||||||||| |||||| | ||| |||||||    
T  1230698 acaatgcataatatatgtaaggtttgaggttcaaaactcagccaccacc 1230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 20284962 - 20284926
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaag 317  Q
    |||| ||||||||||||||||||||||||||||||||    
T  20284962 aactgagttgataaggacaatgcataatatatgtaag 20284926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 21071591 - 21071555
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaag 317  Q
    |||| ||||||||||||||||||||||||||||||||    
T  21071591 aactgagttgataaggacaatgcataatatatgtaag 21071555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 13284318 - 13284263
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccca 336  Q
    |||| |||||||| | |||||| ||||||||| ||||||||||| |||||||||||    
T  13284318 aactcagttgatatgaacaatgtataatatatataaggtttgaggttcaaacccca 13284263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 17704026 - 17704073
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    ||||| |||||||||||||||||||||| ||||| || ||||||||||    
T  17704026 agttggtaaggacaatgcataatatatgcaaggtctgtgattcaaacc 17704073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 336
Target Start/End: Complemental strand, 18422490 - 18422451
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaacccca 336  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  18422490 acaatgcataatatatgtaaggttcgggattcaaacccca 18422451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 19260630 - 19260563
Alignment:
Q  283 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    ||||||||||| | |||||||||||||||||||||||  | | |||||||||| | ||||||| ||||    
T  19260630 cttagttgatatgtacaatgcataatatatgtaaggtccggggttcaaaccccggccaccaccaaaaa 19260563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 26991805 - 26991758
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||||||| ||||||||||||||||||| |||||||| | ||||||||    
T  26991805 agttgatatggacaatgcataatatatgcaaggtttgtggttcaaacc 26991758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 33445594 - 33445641
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||||||||||||||  |||||||||||||| |||| ||||||||||    
T  33445594 acaatgcataatatatacaaggtttgagattcgaacctcagacaccac 33445641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 19701397 - 19701359
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  19701397 aactcagttgataaggataatgcataatatatgtaaggt 19701359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 38535121 - 38535083
Alignment:
Q  287 gttgataaggacaatgcataatatatgta-aggtttgag 324  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  38535121 gttgataaggacaatgcataatatatgtagaggtttgag 38535083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 6038323 - 6038290
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||| |||||||||||||||||||||||||    
T  6038323 agttgatatggacaatgcataatatatgtaaggt 6038290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 7433162 - 7433203
Alignment:
Q  295 ggacaatgcataatatatgtaaggtttgagattcaaacccca 336  Q
    ||||||||||||||||||||||||| || ||||| |||||||    
T  7433162 ggacaatgcataatatatgtaaggtctgggattcgaacccca 7433203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 8442540 - 8442491
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaa 330  Q
    |||| ||||| |||||||||||||||||||||| ||||| |||| |||||    
T  8442540 aactcagttggtaaggacaatgcataatatatgcaaggtctgaggttcaa 8442491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 28439972 - 28440021
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    ||||||||| || ||||||||||||||||||||| || | ||||||||||    
T  28439972 agttgataaagataatgcataatatatgtaaggtctggggttcaaacccc 28440021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 30874733 - 30874766
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||| |||||||||||||||||||||||||||    
T  30874733 agttgacaaggacaatgcataatatatgtaaggt 30874766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 32944942 - 32944987
Alignment:
Q  290 gataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||||||||||||||||||||| ||||| |||  ||||||||||    
T  32944942 gataaggacaatgcataatatatgcaaggtctgaagttcaaacccc 32944987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 3584212 - 3584266
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||||||| |||||||||||||||||||||| |||||  ||||||||||||||    
T  3584212 aacttagttggtaaggacaatgcataatatatgcaaggtacgagattcaaacccc 3584266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 40854936 - 40854976
Alignment:
Q  288 ttgataaggacaatgcataatatatgtaaggtttgagattc 328  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  40854936 ttgataaggaaaatgcataatatatgtaaggtttgagattc 40854976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 43982087 - 43982129
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattc 328  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  43982087 agttgataaggacaatgcataatatatgtaaagtttgggattc 43982129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 350
Target Start/End: Original strand, 6384859 - 6384928
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||| |||| ||||||||||||||||||||||| ||||| || | ||| ||||| |||||||||| ||||    
T  6384859 aactcagttaataaggacaatgcataatatatgcaaggtctggggttcgaaccctagacaccaccaaaaa 6384928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 350
Target Start/End: Complemental strand, 40187689 - 40187620
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||| ||||| || ||||||||||||||||||||||||| || | ||||||||||  |||||||| ||||    
T  40187689 aactcagttggtagggacaatgcataatatatgtaaggtctgcggttcaaaccccgaacaccaccaaaaa 40187620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 7388078 - 7388038
Alignment:
Q  295 ggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  7388078 ggacaatgcataatatatgtaaggttcgggattcaaacccc 7388038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 21928171 - 21928119
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||||||||| || |||||||||||||| |||| ||||| |||||||||||||    
T  21928171 aacttagttggtatggacaatgcataatttatgcaaggtctgagattcaaacc 21928119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 34897532 - 34897568
Alignment:
Q  295 ggacaatgcataatatatgtaaggtttgagattcaaa 331  Q
    |||||||||||||||||||||||||||||| ||||||    
T  34897532 ggacaatgcataatatatgtaaggtttgaggttcaaa 34897568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 35142197 - 35142133
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||||||| ||||||||||||||||||| || ||||||| ||| ||||||   ||||||||||||    
T  35142197 agttgatatggacaatgcataatatatgcaaagtttgaggttcgaaccccgaccaccacccaaaa 35142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 42227847 - 42227807
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    ||||||||||||||||||||||||||||| ||| |||||||    
T  42227847 taaggacaatgcataatatatgtaaggttcgaggttcaaac 42227807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 46987099 - 46987163
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    ||||| |||||||||||||||||||||| |||||  | | ||| |||||| ||||||||||||||    
T  46987099 agttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccccggacaccacccaaaa 46987163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 5458119 - 5458072
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||||||||| ||||||||||||||||| ||||| || ||||||||||    
T  5458119 agttgataagaacaatgcataatatatgcaaggtctgggattcaaacc 5458072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 10362357 - 10362310
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattc 328  Q
    |||| |||||||||||| ||||||||||||||| |||||| |||||||    
T  10362357 aactcagttgataaggagaatgcataatatatgcaaggttcgagattc 10362310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 27279441 - 27279402
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  27279441 gacaatgtataatatatgtaaggtttgaggttcaaacccc 27279402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 34000270 - 34000309
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtt 320  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  34000270 aactcagttgataaggataatgcataatatatgtaaggtt 34000309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 46659443 - 46659396
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    ||||| || |||||||| |||||||||| |||||||||||||||||||    
T  46659443 agttggtatggacaatgtataatatatgcaaggtttgagattcaaacc 46659396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 316
Target Start/End: Original strand, 8227362 - 8227392
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaa 316  Q
    |||||||||||||||||||||||||||||||    
T  8227362 agttgataaggacaatgcataatatatgtaa 8227392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 15015249 - 15015287
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  15015249 aactcagttgataagaacaatgcataatatatgtaaggt 15015287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 16971020 - 16971058
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  16971020 acaatgtataatatatgtaaggtctgagattcaaacccc 16971058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 36755035 - 36755073
Alignment:
Q  294 aggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  36755035 aggacaatgcataatatatgtaaggttcgggattcaaac 36755073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 36760832 - 36760870
Alignment:
Q  294 aggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  36760832 aggacaatgcataatatatgtaaggttcgggattcaaac 36760870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 37451285 - 37451243
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattc 328  Q
    |||||||||||| ||||||||||||||||||||| || |||||    
T  37451285 agttgataaggataatgcataatatatgtaaggtctgggattc 37451243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 350
Target Start/End: Original strand, 2916110 - 2916179
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||| ||||| || ||||||||||||||||||| ||||| || ||||| |||||| |||| |||| ||||    
T  2916110 aactcagttggtacggacaatgcataatatatgcaaggtctgggattcgaaccccggacatcaccaaaaa 2916179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 350
Target Start/End: Complemental strand, 10236958 - 10236889
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||| ||||| |||| |||||||||||| |||| |||||| ||| ||| |||||| ||||||||| ||||    
T  10236958 aactcagttggtaagaacaatgcataatgtatgcaaggttcgaggttcgaaccccggacaccaccaaaaa 10236889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 19684265 - 19684224
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttg 322  Q
    |||| ||||||||  |||||||||||||||||||||||||||    
T  19684265 aactcagttgatatagacaatgcataatatatgtaaggtttg 19684224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 22777407 - 22777374
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||||||||||||||||||||| |||||    
T  22777407 agttgataaggacaatgcataatatatgcaaggt 22777374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 27833449 - 27833416
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  27833449 agttggtaaggacaatgcataatatatgtaaggt 27833416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 321
Target Start/End: Original strand, 30059538 - 30059567
Alignment:
Q  292 taaggacaatgcataatatatgtaaggttt 321  Q
    ||||||||||||||||||||||||||||||    
T  30059538 taaggacaatgcataatatatgtaaggttt 30059567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 324
Target Start/End: Original strand, 38454024 - 38454053
Alignment:
Q  295 ggacaatgcataatatatgtaaggtttgag 324  Q
    ||||||||||||||||||||||||||||||    
T  38454024 ggacaatgcataatatatgtaaggtttgag 38454053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 39926586 - 39926529
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacacca 343  Q
    |||||||||||||||||||||||||||| || ||| | | |||||||| || ||||||    
T  39926586 agttgataaggacaatgcataatatatgcaatgttcggggttcaaacctcaaacacca 39926529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 312
Target Start/End: Complemental strand, 44797390 - 44797361
Alignment:
Q  283 cttagttgataaggacaatgcataatatat 312  Q
    ||||||||||||||||||||||||||||||    
T  44797390 cttagttgataaggacaatgcataatatat 44797361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 45151390 - 45151439
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||||| | | |||||||||||||||||||||||| | ||||||||||    
T  45151390 agttgataggaataatgcataatatatgtaaggtttggggttcaaacccc 45151439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 48527203 - 48527236
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||||||||||||||||||||| |||||    
T  48527203 agttgataaggacaatgcataatatatgcaaggt 48527236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 45096039 - 45096097
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||||||||||||||||||||||||| ||||| || | ||| |||||||||||||||    
T  45096039 agttgataaggacaatgcataatatatgcaaggtctgtggttcgaaccccagacaccac 45096097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 55126019 - 55126077
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||||| |||||||| ||||||||||| |||||| ||| |||||||||||||||||||    
T  55126019 agttgatgaggacaatacataatatatgcaaggttcgaggttcaaaccccagacaccac 55126077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 30200839 - 30200896
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacacca 343  Q
    ||||| |||||||||||||||||||||| |||||||||| ||| |||||| |||||||    
T  30200839 agttgctaaggacaatgcataatatatgcaaggtttgaggttcgaaccccggacacca 30200896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 5117221 - 5117259
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgag 324  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  5117221 agttgataaggacaatacataatatatgtaaggtttgag 5117259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 21245803 - 21245853
Alignment:
Q  283 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||||||| |||||||||||||||||||||||||||| || | ||||||||    
T  21245803 cttagttggtaaggacaatgcataatatatgtaaggtctggggttcaaacc 21245853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 22843487 - 22843541
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    ||||||||||||||||||||||||| | | || |||||||||||||||| |||||    
T  22843487 gacaatgcataatatatgtaaggttcggggttgaaaccccagacaccacacaaaa 22843541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 22462320 - 22462361
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttg 322  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  22462320 aactcagttgataaggacaatgcataatatatgtaatgtttg 22462361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 29631199 - 29631263
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    ||||| || ||||||||||||||||||| |||||| | |||||||||||| | ||||||| ||||    
T  29631199 agttggtatggacaatgcataatatatgcaaggttcgggattcaaaccccggccaccaccaaaaa 29631263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 35191865 - 35191809
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacacc 342  Q
    ||||| |||||||||||||||||||||| ||||| || | ||| |||||||||||||    
T  35191865 agttggtaaggacaatgcataatatatgcaaggtctggggttcgaaccccagacacc 35191809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 41822136 - 41822172
Alignment:
Q  288 ttgataaggacaatgcataatatatgtaaggtttgag 324  Q
    |||||||||||||||||||||||||||||| ||||||    
T  41822136 ttgataaggacaatgcataatatatgtaagatttgag 41822172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 45254244 - 45254280
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttg 322  Q
    ||||| |||||||||||||||||||||||||||||||    
T  45254244 agttggtaaggacaatgcataatatatgtaaggtttg 45254280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 48688137 - 48688185
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||||||||||||||||||||||||||| ||| ||| |||| ||||||    
T  48688137 gacaatgcataatatatgtaaggtttgaggttcgaactccagtcaccac 48688185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 40715339 - 40715390
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    |||||||||||||| || |||| ||||||||| |||||||||| ||||||||    
T  40715339 aacttagttgataatgataatgtataatatatataaggtttgatattcaaac 40715390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 53221966 - 53222005
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtt 320  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  53221966 aactcagttgataaggacaatgtataatatatgtaaggtt 53222005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 54230147 - 54230092
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 341  Q
    ||||| |||||||||||||||||||||| |||||||| | ||| |||||| |||||    
T  54230147 agttggtaaggacaatgcataatatatgcaaggtttggggttcgaaccccggacac 54230092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 7827516 - 7827554
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  7827516 aactcagttgatatggacaatgcataatatatgtaaggt 7827554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 7829904 - 7829942
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  7829904 aactcagttgatatggacaatgcataatatatgtaaggt 7829942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 31085021 - 31085055
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtt 320  Q
    |||||||||||||| ||||||||||||||||||||    
T  31085021 agttgataaggacagtgcataatatatgtaaggtt 31085055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 43630455 - 43630421
Alignment:
Q  297 acaatgcataatatatgtaaggtttgagattcaaa 331  Q
    |||||||||||||||||||||||||||| ||||||    
T  43630455 acaatgcataatatatgtaaggtttgaggttcaaa 43630421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 4216447 - 4216414
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||||||||||||||||||||| |||||    
T  4216447 agttgataaggacaatgcataatatatgcaaggt 4216414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 33404241 - 33404286
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaa 331  Q
    |||||||| ||||||| |||||||||||||| ||||||| ||||||    
T  33404241 agttgatatggacaatacataatatatgtaaagtttgaggttcaaa 33404286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 350
Target Start/End: Complemental strand, 38573626 - 38573557
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||| |||||||||| ||||||||||||||||  ||||| |  ||||| |||||| ||||||||| ||||    
T  38573626 aactcagttgataagaacaatgcataatatatacaaggtctaggattcgaaccccggacaccaccaaaaa 38573557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 41087581 - 41087614
Alignment:
Q  283 cttagttgataaggacaatgcataatatatgtaa 316  Q
    |||||||| |||||||||||||||||||||||||    
T  41087581 cttagttggtaaggacaatgcataatatatgtaa 41087614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 53162213 - 53162258
Alignment:
Q  288 ttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||||| ||||||||||||| ||||| |||||||||| ||||||||    
T  53162213 ttgatatggacaatgcataaaatatgcaaggtttgaggttcaaacc 53162258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000005; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 281 - 350
Target Start/End: Original strand, 404171 - 404240
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||||||||| |||||||||||||||||||||| || ||  ||| ||| |||||||||||||||| ||||    
T  404171 aacttagttggtaaggacaatgcataatatatgcaatgtccgaggttcgaaccccagacaccaccaaaaa 404240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 3808160 - 3808108
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||||||||||||||||||| |||||  |||||||||||||||| ||||||    
T  3808160 taaggacaatgcataatatatgcaaggtccgagattcaaaccccagccaccac 3808108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 288 - 335
Target Start/End: Original strand, 3274016 - 3274063
Alignment:
Q  288 ttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||||    
T  3274016 ttgatatggacaatgcataatatatgtaaagtttgagatttaaacccc 3274063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 9334033 - 9333970
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||| |||||| |||||||||||||||||||||||||||||| | ||| |||| | ||||||||    
T  9334033 aactcagttgacaaggacaatgcataatatatgtaaggtttggggttcgaacctcggacaccac 9333970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 299 - 350
Target Start/End: Original strand, 35110080 - 35110131
Alignment:
Q  299 aatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||| ||||    
T  35110080 aatgcataatatatgtaaggtttgaggttcgaaccccaaacaccaccaaaaa 35110131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 1989081 - 1989044
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  1989081 gacaatgcataatatatgtaaggtttgaggttcaaacc 1989044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 10497194 - 10497145
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 341  Q
    ||||||||||||||||||||||||||||||| | ||| || |||||||||    
T  10497194 taaggacaatgcataatatatgtaaggtttgcggttcgaatcccagacac 10497145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 12204382 - 12204419
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttga 323  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12204382 agttgatatggacaatgcataatatatgtaaggtttga 12204419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 24623365 - 24623316
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||||| |||||||||||||||||||||||||| | | ||||||||||    
T  24623365 agttgatatggacaatgcataatatatgtaaggttcggggttcaaacccc 24623316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 2617258 - 2617206
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||||||||| ||  ||||||||||||||||||||||||||||| || |||||    
T  2617258 aacttagttggtagagacaatgcataatatatgtaaggtttgaggtttaaacc 2617206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 19554163 - 19554215
Alignment:
Q  283 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||||| ||| |||||||||||||||||| |||||||| ||||| ||||||    
T  19554163 cttagttggtaaagacaatgcataatatatgcaaggtttgtgattcgaacccc 19554215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 29431474 - 29431530
Alignment:
Q  288 ttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||||||||||||||||||| |||||||||| |||| ||| | |||| ||||||||    
T  29431474 ttgataaggacaatgcataatgtatgtaaggtctgaggttcgatccccggacaccac 29431530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 30374574 - 30374522
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    ||||||||||| |||||||||| |||||||| |||||||||| ||| ||||||    
T  30374574 taaggacaatgtataatatatgcaaggtttgggattcaaacctcagccaccac 30374522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 8138506 - 8138459
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||||||||| ||||||||||||||||||||||| || | ||||||||    
T  8138506 agttgataagaacaatgcataatatatgtaaggtctggggttcaaacc 8138459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 324
Target Start/End: Complemental strand, 15291743 - 15291700
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgag 324  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||    
T  15291743 aacttagttggtaaggacaatgaataatatatgcaaggtttgag 15291700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 884120 - 884070
Alignment:
Q  283 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||| |||| ||||||||||||| |||||||||||||||||| ||| ||||    
T  884120 cttaattgacaaggacaatgcatgatatatgtaaggtttgaggttcgaacc 884070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 1795004 - 1794966
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  1795004 aactcagttgatatggacaatgcataatatatgtaaggt 1794966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 14945561 - 14945511
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccca 336  Q
    ||||||||  |||| |||||||||||||||||||| | |||||||||||||    
T  14945561 agttgatagagacagtgcataatatatgtaaggttcgggattcaaacccca 14945511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 28046226 - 28046188
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgag 324  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  28046226 agttgataaagacaatgcataatatatgcaaggtttgag 28046188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 28898864 - 28898902
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  28898864 aacttagttggtaaggacaatgcataatatatgaaaggt 28898902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 331924 - 331887
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  331924 gacaatgcataatatatgcaaggtttgggattcaaacc 331887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 9923255 - 9923300
Alignment:
Q  288 ttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 333  Q
    |||||||||||||||||||||||||  |||||| | ||||||||||    
T  9923255 ttgataaggacaatgcataatatatacaaggttcgggattcaaacc 9923300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 18256896 - 18256929
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||||||||||||||||||||| |||||    
T  18256896 agttgataaggacaatgcataatatatgcaaggt 18256929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 29069496 - 29069545
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 335  Q
    |||||||| ||||||||||||||||||| || || |||| ||||||||||    
T  29069496 agttgatagggacaatgcataatatatgaaaagtctgaggttcaaacccc 29069545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 31971537 - 31971590
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 334  Q
    |||| ||||| |||||||||||||||||||||| |||||  ||| |||||||||    
T  31971537 aactcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaaccc 31971590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 33824894 - 33824927
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||||||||||||||||||||||| |||||    
T  33824894 agttgataaggacaatgcataatatatgcaaggt 33824927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 3391 - 3333
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||||||||||||||||| |||||||||  ||||||| |||||| ||||||||| ||||    
T  3391 taaggacaatgcataatagatgtaaggtccgagattcgaaccccggacaccaccaaaaa 3333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1619 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1619
Description:

Target: scaffold1619; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 1054 - 1102
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 344  Q
    |||||||||||||||||| |||||  | |||||||||||||||||||||    
T  1054 gacaatgcataatatatgcaaggtccgggattcaaaccccagacaccac 1102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 17824 - 17773
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaac 332  Q
    |||||||||| || ||| ||||||||||||||| |||||||||| |||||||    
T  17824 aacttagttggtagggaaaatgcataatatatgcaaggtttgagtttcaaac 17773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 104831 - 104768
Alignment:
Q  287 gttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    ||||||| ||||||||||||| |||   ||||| || |||||||||||||| ||||||||||||    
T  104831 gttgatatggacaatgcataaaatagacaaggtctgggattcaaaccccagccaccacccaaaa 104768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 292 - 330
Target Start/End: Complemental strand, 7010 - 6972
Alignment:
Q  292 taaggacaatgcataatatatgtaaggtttgagattcaa 330  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  7010 taaggacaatacataatatatgtaaggttttagattcaa 6972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 65096 - 65150
Alignment:
Q  296 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||||| ||||||||||||||||||| |  ||| |||||||||||||||| ||||    
T  65096 gacaatacataatatatgtaaggtttaacgttcgaaccccagacaccaccaaaaa 65150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 1261 - 1294
Alignment:
Q  286 agttgataaggacaatgcataatatatgtaaggt 319  Q
    |||||||| |||||||||||||||||||||||||    
T  1261 agttgatatggacaatgcataatatatgtaaggt 1294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 5204 - 5245
Alignment:
Q  295 ggacaatgcataatatatgtaaggtttgagattcaaacccca 336  Q
    ||||||||||||||||||| ||||| |||| |||||||||||    
T  5204 ggacaatgcataatatatgcaaggtctgaggttcaaacccca 5245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 350
Target Start/End: Original strand, 25397 - 25466
Alignment:
Q  281 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 350  Q
    |||| ||||| |||||||||||||||||||||| |||||    | ||| |||||||||||||||| ||||    
T  25397 aactcagttggtaaggacaatgcataatatatgcaaggtccagggttcgaaccccagacaccaccaaaaa 25466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University