View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5458_high_5 (Length: 355)
Name: NF5458_high_5
Description: NF5458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5458_high_5 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 17 - 355
Target Start/End: Original strand, 7092180 - 7092518
Alignment:
| Q |
17 |
taaggtgtattattatgaaactagaattaaattattaannnnnnnnagggataaattattcatattatattgtaaattaatggtaatacacctagctagg |
116 |
Q |
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| T |
7092180 |
taaggtgtattattatgaaactagaattaaattattaattttttttagggataaattattcatattatattgtaaattaatggtaatacacctagctagg |
7092279 |
T |
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| Q |
117 |
gacaatggtttttgtgaaggacggatcctacaagaatcattcctaaaagttcccctacaattaaaaacaaaacatcacaaagatagagagatacctttga |
216 |
Q |
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| T |
7092280 |
gacaatggtttttgtgaaggacggatcctacaagaatcattcctaaaagttcccctacaattaaaaacaaaacatcacaaagatagagagatacctttga |
7092379 |
T |
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| Q |
217 |
ggataaccaaaccaaaccgaatcattttagttcctatatgagagggctcaagtcatgccaatagcaacatagaaaaatctatctcgaaaaggggatacta |
316 |
Q |
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| T |
7092380 |
ggataaccaaaccaaaccgaatcattttagttcctatatgagagggctcaagtcatgccaatagcaacatagaaaaatctatctcgaaaaggggataata |
7092479 |
T |
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| Q |
317 |
gattgacacatattacattcaaatacaatatactatgat |
355 |
Q |
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| T |
7092480 |
gattgacacatattacattcaaatacaatatactatgat |
7092518 |
T |
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