View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5458_low_11 (Length: 240)
Name: NF5458_low_11
Description: NF5458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5458_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 7092597 - 7092818
Alignment:
| Q |
1 |
tttcttgctaataaattcgaatctctcttctcttgattgcaccacgcaagtatctttactttcactgtcctgtcttattcgtttacaatactccaaatat |
100 |
Q |
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| T |
7092597 |
tttcttgctaataaatttgaatctctcttctcttgattgcaccacacaagtatcttgactttcactgtcctgtcttattcgtttacaatactccaaatat |
7092696 |
T |
|
| Q |
101 |
gggttcagagcagaggcaaatcctccccaatcatgctctgttttaactccacgcacaagcatatgatcctcactaaaattcatgcgcatgcatgctattt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7092697 |
gggttcagagcagaggcaaatcctccccaatcatgctctgttttaactccacgcacaagcatatgatcctcactaaaattcatgcgcatgcatgctattt |
7092796 |
T |
|
| Q |
201 |
tgagtttatcctacttttctgc |
222 |
Q |
| |
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|||||||||||||||||||||| |
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|
| T |
7092797 |
tgagtttatcctacttttctgc |
7092818 |
T |
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