View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5461-Insertion-11 (Length: 479)
Name: NF5461-Insertion-11
Description: NF5461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5461-Insertion-11 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
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Alignment Details
Target: chr4 (Bit Score: 415; Significance: 0; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 23 - 478
Target Start/End: Original strand, 48701862 - 48702319
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701862 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
48701961 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
48701962 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacacaaactagg |
48702061 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatgag |
320 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48702062 |
agaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatgag |
48702161 |
T |
|
| Q |
321 |
tagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggcagcgtgtgaattttcaactctgcatagtaa |
420 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
48702162 |
tagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttatggcagcgtgtggattttcaactttgcatagtaa |
48702261 |
T |
|
| Q |
421 |
ctttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
478 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48702262 |
ctttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
48702319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 23 - 478
Target Start/End: Original strand, 48697172 - 48697630
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaa-ccacggggcaagagtagagaacttt |
121 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
48697172 |
ataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaaccacggggcaagagtagagaacttt |
48697271 |
T |
|
| Q |
122 |
cactaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactag |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
48697272 |
cactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacacaaactag |
48697371 |
T |
|
| Q |
220 |
gagaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
319 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697372 |
gagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
48697471 |
T |
|
| Q |
320 |
gtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggcagcgtgtgaattttcaactctgcatagta |
419 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
48697472 |
gtagaataatgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttatggcagcatgtgaattttcaactttgcatagta |
48697571 |
T |
|
| Q |
420 |
actttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
478 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697572 |
actttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
48697630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 23 - 478
Target Start/End: Original strand, 30945518 - 30945992
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
30945518 |
ataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa-gggaaaaaatcacggggcaagagtagagaactttc |
30945616 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaa--actaacacaaacta |
218 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| |
|
|
| T |
30945617 |
actaagtggaagaaattacagaacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaacactaacactaccta |
30945716 |
T |
|
| Q |
219 |
ggagaaacctcacaggagaaactaatttttctctctatattttttctctcacta-tcta-----aacaa---------gctttac-ttgttcttgtgttg |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||| | |||| ||||||| |||||| |
|
|
| T |
30945717 |
ggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattctactaagaacaagtagttgttgtgttactttgttctggtgttg |
30945816 |
T |
|
| Q |
303 |
ttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggcagcgtgtgaatt |
402 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
30945817 |
ttactaatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttatggcagcatgtgaatt |
30945916 |
T |
|
| Q |
403 |
ttcaactctgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
478 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945917 |
ttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
30945992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 23 - 478
Target Start/End: Original strand, 30950224 - 30950698
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950224 |
ataagataagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa-gggaaaaaaccacggggcaagagtagagaactttc |
30950322 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaa--actaacacaaacta |
218 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| | ||| |
|
|
| T |
30950323 |
actaagtggaagaaattacagaacctctctctaaatacaaggaaagtacaattaccactctctcttataaataggagaatacaaacactaacactaccta |
30950422 |
T |
|
| Q |
219 |
ggagaaacctcacaggagaaactaatttttctctctatattttttctctcacta-tcta-----aacaa---------gctttac-ttgttcttgtgttg |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||| | |||| ||||| | |||||| |
|
|
| T |
30950423 |
ggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattctactaagaacaagtagttgttgtgttactttgttatggtgttg |
30950522 |
T |
|
| Q |
303 |
ttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggcagcgtgtgaatt |
402 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950523 |
ttactaatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttatggcagcgtgtgaatt |
30950622 |
T |
|
| Q |
403 |
ttcaactctgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
478 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950623 |
ttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
30950698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 23 - 317
Target Start/End: Complemental strand, 42266179 - 42265883
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266179 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
42266080 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266079 |
actaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
42265980 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggat |
317 |
Q |
| |
|
|||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42265979 |
agaaacctcacaggagaagctatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggat |
42265883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 23 - 317
Target Start/End: Complemental strand, 42270898 - 42270602
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270898 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
42270799 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270798 |
actaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
42270699 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggat |
317 |
Q |
| |
|
|||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270698 |
agaaacctcacaggagaagctatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggat |
42270602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 23 - 318
Target Start/End: Original strand, 24520066 - 24520363
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520066 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
24520165 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
24520166 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacacaaactagg |
24520265 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
318 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520266 |
agaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
24520363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 23 - 271
Target Start/End: Complemental strand, 10427556 - 10427315
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||| ||||||| |
|
|
| T |
10427556 |
ataagagacgagaaaagaggaactgaacacacaatattttacgcggaaacccctcaacaaataaggggaaaaaactacggggaaaaagtagataactttc |
10427457 |
T |
|
| Q |
123 |
actaagtggaaga-aattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactag |
219 |
Q |
| |
|
||||||||||||| ||||||| ||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| ||||| |
|
|
| T |
10427456 |
actaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattacc-ctctctctt-gaaataggagaatactaac--------actag |
10427367 |
T |
|
| Q |
220 |
gagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
271 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
10427366 |
gagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
10427315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 1979375 - 1979253
Alignment:
| Q |
106 |
aagagtagagaactttcactaagtggaagaaattacaggacctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaa |
205 |
Q |
| |
|
||||||||| |||||||| |||| ||||||||||||| ||||||||||||| ||||||| ||| | |||||||||||||||||||| |||||||| | |
|
|
| T |
1979375 |
aagagtagataactttcagtaagaggaagaaattacacgacctctctaaatgcaaggagggtatatttaccactctctcttataaacaggagaat----a |
1979280 |
T |
|
| Q |
206 |
ctaacacaaactaggagaaacctcaca |
232 |
Q |
| |
|
||| ||| ||| ||||||||||||||| |
|
|
| T |
1979279 |
ctagcactaaccaggagaaacctcaca |
1979253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 48783003 - 48782850
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||| || |||| ||||||||| |
|
|
| T |
48783003 |
ataagaaacgagaaaacaggaactgaacacacaatattt-acgtggaaatttctcaacaaataaagggaaaaa--catgggg---------agaactttc |
48782916 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttat |
188 |
Q |
| |
|
|||||||||||||||||| | ||| ||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
48782915 |
actaagtggaagaaattagatgacctctctctaaatacatg--gagtacaattaccactctctcttat |
48782850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 17248112 - 17248015
Alignment:
| Q |
35 |
aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaa |
133 |
Q |
| |
|
||||||| |||| || ||||||||||| || |||||| |||| || |||||||||||||||||||| || ||||||| |||||||||| ||||||||| |
|
|
| T |
17248112 |
aaaagagaaactaaatacacaatattt-acatggaaatcccttaataaataaggggaaaaaaccaccggataagagtatagaactttcattaagtggaa |
17248015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 1979604 - 1979567
Alignment:
| Q |
48 |
aacacacaatattttacgtggaaacccctcaacaaataa |
86 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1979604 |
aacacacaatattt-acgtggaaacccctcaacaaataa |
1979567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 415; Significance: 0; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 23 - 478
Target Start/End: Original strand, 5198696 - 5199153
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198696 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
5198795 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5198796 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacacaaactagg |
5198895 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatgag |
320 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198896 |
agaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatgag |
5198995 |
T |
|
| Q |
321 |
tagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggcagcgtgtgaattttcaactctgcatagtaa |
420 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
5198996 |
tagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttatggcagcgtgtggattttcaactttgcatagtaa |
5199095 |
T |
|
| Q |
421 |
ctttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
478 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5199096 |
ctttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
5199153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 23 - 269
Target Start/End: Complemental strand, 15603153 - 15602905
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15603153 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
15603054 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
||||||| |||||||||||| ||| |||||||||| || |||| |||||||||||| ||| |||| ||||||||||||||| ||||||||| |||| | |
|
|
| T |
15603053 |
actaagtagaagaaattacaagacctctctctaaatgcatggagtgtacaattaccattctatcttgtaaataggagaatactaactaacacttactaag |
15602954 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctca |
269 |
Q |
| |
|
|||||||||| || | || ||||||||||| ||||||||||| |||||| |
|
|
| T |
15602953 |
agaaacctcatagaaaaatctaatttttctttctatatttttcctctca |
15602905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 825755 - 825632
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa-aaaaccacggggcaagagtagagaacttt |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
825755 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccactcaacaaataaggggaaaaaaaccacggggcaagagtagagaacttt |
825656 |
T |
|
| Q |
122 |
cactaagtggaagaaattacagga |
145 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
825655 |
cactaagtggaagaaattacagga |
825632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 830411 - 830288
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa-aaaaccacggggcaagagtagagaacttt |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
830411 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaaccacggggcaagagtggagaacttt |
830312 |
T |
|
| Q |
122 |
cactaagtggaagaaattacagga |
145 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
830311 |
cactaagtggaagaaattacagga |
830288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 23 - 247
Target Start/End: Complemental strand, 28716036 - 28715816
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | |||| |||||||||||| |
|
|
| T |
28716036 |
ataagagacgacaaaagaggaattgaacacacaatattt-acgtggaaacccctcattaaataaggggaaaaa-ccacaagagaagaatagagaactttc |
28715939 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | || ||||||||||||||| |||||||| | ||||| |
|
|
| T |
28715938 |
acaaagtggaagaaattacaggacatctctctaaatgcaaggagagtacaattaccaccgtttcctataaataggagaat----actaacactacctagg |
28715843 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttt |
247 |
Q |
| |
|
|||||||| ||| ||||||||| |||| |
|
|
| T |
28715842 |
agaaaccttacaagagaaactattttt |
28715816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 23 - 271
Target Start/End: Original strand, 30396952 - 30397191
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaac-ttt |
121 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||| |||||| ||| |||| |||||||||||| ||| |
|
|
| T |
30396952 |
ataagagacgagaaaagacgaactgaacacaca-tatttt-cgttgaaacccctcaacaaataagggaaaaaaatcacagggcgagagtagagaactttt |
30397049 |
T |
|
| Q |
122 |
cactaagtggaagaaattacaggacctc--tctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactag |
219 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| |||||||||||| ||||||| |||| | || ||||||||||||| ||| ||||| |
|
|
| T |
30397050 |
cactaagtggaagaaattacaagacctctttctatatacaaggagagacaaattacc-ctctatgtt-gaaataggagaatattaac--------actag |
30397139 |
T |
|
| Q |
220 |
gagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
271 |
Q |
| |
|
|||||| |||||||||||||||| ||| ||||||||||| || |||||||| |
|
|
| T |
30397140 |
gagaaatctcacaggagaaactatatttcctctctatattgttcctctcact |
30397191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 830291 - 830209
Alignment:
| Q |
193 |
aggagaatacaaac--taacacaaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactat |
273 |
Q |
| |
|
|||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
830291 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
830209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 825635 - 825553
Alignment:
| Q |
193 |
aggagaatacaaac--taacacaaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactat |
273 |
Q |
| |
|
|||||||||||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
825635 |
aggagaatacaaacactaacactacctaggagaaacctcgcaggagaaactaatttttctctctatatttttcctctcactat |
825553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 51 - 200
Target Start/End: Original strand, 13843865 - 13844014
Alignment:
| Q |
51 |
acacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacagga--cct |
148 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||||| | || || |||| |||| ||||| ||||||||||||||||||||| ||| |
|
|
| T |
13843865 |
acacaatattt-acgtggaaacccctcaacaaataaggagaaaaatt-ataggttaaaagtatagaattttcattaagtggaagaaattacaggacccct |
13843962 |
T |
|
| Q |
149 |
ctctaaatacaaggagagtacaattaccactctctcttataaataggagaat |
200 |
Q |
| |
|
| |||||||||| ||| || |||||||||||| | ||| |||||||||||| |
|
|
| T |
13843963 |
ttataaatacaagaagaataaaattaccactctattttaaaaataggagaat |
13844014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 31592951 - 31593121
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||| |||||||||||| | ||||| |||||| | |||||||||| | ||||||||||||||||| |
|
|
| T |
31592951 |
ataagagacgagaaaagaggaacataacatacaataatttacgtggaaatctctcaataaataa-gaaaaaaaaccac-agataagagtagagaactttc |
31593048 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctctaaatacaaggagagtacaattaccactctctcttataaataggagaa |
199 |
Q |
| |
|
||||| | ||||||||||| || ||| || ||| ||| |||||| |||||||| |||||| |||||||||||| |
|
|
| T |
31593049 |
actaaccgaaagaaattacaaga--tctatatatataagaagagtataattacca--gtctcttgtaaataggagaa |
31593121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 202
Target Start/End: Complemental strand, 8004292 - 8004167
Alignment:
| Q |
77 |
caacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctct--aaatacaaggagagtacaatta |
174 |
Q |
| |
|
||||||||||| ||||||| | |||||| | || |||| |||||||||| | |||||||||||| | |||||||| |||| ||| |||||||||||| |
|
|
| T |
8004292 |
caacaaataagaggaaaaa-caacggggtatgactagaaaactttcactgaatggaagaaattataaaacctctctttaaatgtaagaagagtacaatta |
8004194 |
T |
|
| Q |
175 |
ccactctctcttataaataggagaatac |
202 |
Q |
| |
|
| |||||||||||||||||||||||||| |
|
|
| T |
8004193 |
c-actctctcttataaataggagaatac |
8004167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 427 - 477
Target Start/End: Original strand, 34614229 - 34614279
Alignment:
| Q |
427 |
atgtgaacatagaaattacatgccaacatgttttactgccatgtgataaca |
477 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
34614229 |
atgtaaacatagaaattacatgctaacatgttttactgccatgtgacaaca |
34614279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 28715747 - 28715678
Alignment:
| Q |
321 |
tagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggca |
391 |
Q |
| |
|
|||||||||||||| | ||||||||||||| ||||||||| ||||||||||||| || ||||||||||| |
|
|
| T |
28715747 |
tagaatggtgcaagag-catgctatttataggagtgaaagaaccatgccccaaccatttacatttatggca |
28715678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 42117876 - 42117764
Alignment:
| Q |
43 |
aactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattaca |
142 |
Q |
| |
|
||||||||| ||||||||| |||| |||||| ||||| |||||||||||||| ||||| | ||| |||||| |||||||| ||| | |||||||| | |
|
|
| T |
42117876 |
aactgaacatacaatattt-acgtagaaacctctcaattaataaggggaaaaa-ccacgagacaaaagtagataactttcattaaacgagagaaattata |
42117779 |
T |
|
| Q |
143 |
ggacctctctaaata |
157 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
42117778 |
agacctctctaaata |
42117764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 13840401 - 13840456
Alignment:
| Q |
147 |
ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
202 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
13840401 |
ctctctaaatataaggagagtacaattacaattctctcttaaaaataaaagaatac |
13840456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 346; Significance: 0; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 23 - 478
Target Start/End: Original strand, 27878750 - 27879225
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878750 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
27878849 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaa--actaacacaaacta |
218 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| |
|
|
| T |
27878850 |
actaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaacactaacactaccta |
27878949 |
T |
|
| Q |
219 |
ggagaaacctcacaggagaaactaatttttctctctatattttttctctcacta-tcta-----aacaa---------gctttac-ttgttcttgtgttg |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||| | |||| ||||||| |||||| |
|
|
| T |
27878950 |
ggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattctactaagaacaagtagttgttgtgttactttgttctggtgttg |
27879049 |
T |
|
| Q |
303 |
ttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggcagcgtgtgaatt |
402 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27879050 |
ttactaatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttatggcagcgtgtgaatt |
27879149 |
T |
|
| Q |
403 |
ttcaactctgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
478 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27879150 |
ttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacac |
27879225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 23 - 319
Target Start/End: Original strand, 26976172 - 26976470
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26976172 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccaaggggcaagagtagagaactttc |
26976271 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26976272 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacacaaactagg |
26976371 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
319 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976372 |
agaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
26976470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 23 - 318
Target Start/End: Complemental strand, 1234977 - 1234680
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234977 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
1234878 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1234877 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacacaaactagg |
1234778 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
318 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234777 |
agaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
1234680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 23 - 317
Target Start/End: Original strand, 27874031 - 27874327
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874031 |
ataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaagggaaaaaaccacggggcaagagtagagaactttc |
27874130 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctct--ctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874131 |
actaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
27874230 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggat |
317 |
Q |
| |
|
|||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874231 |
agaaacctcacaggagaagctatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggat |
27874327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 28 - 268
Target Start/End: Complemental strand, 30966923 - 30966683
Alignment:
| Q |
28 |
agacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa-aaaaccacggggcaagagtagagaactttcacta |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
30966923 |
agacgagaaaagaggaactgaacacacaatattt-acgtggaaacccatcaacaaataagggaaataaaatcacggggcaagagtagagaactttcacta |
30966825 |
T |
|
| Q |
127 |
agtggaagaaattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactaggagaa |
224 |
Q |
| |
|
||||||||||||| ||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||| | | | ||||||||| |
|
|
| T |
30966824 |
agtggaagaaattgcagaacctctctctaaatgcaaggagagtacaattaccactctctcttgtaaatagaagaat----actgaggctacctaggagaa |
30966729 |
T |
|
| Q |
225 |
acctcac-aggagaaactaatt-tttctctctatattttttctctc |
268 |
Q |
| |
|
||||||| || |||||||| || ||||||||||||||||||||||| |
|
|
| T |
30966728 |
acctcacaagtagaaactatttctttctctctatattttttctctc |
30966683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 271
Target Start/End: Complemental strand, 18968153 - 18967912
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
18968153 |
ataagagacgagaaaagaggaactgaatacataatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagaaaactttc |
18968054 |
T |
|
| Q |
123 |
actaagtggaaga-aattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactag |
219 |
Q |
| |
|
||||||||||||| ||||||| ||| |||||||||||||||||||| ||||| | ||||||| | |||||||||||||| ||| ||||| |
|
|
| T |
18968053 |
actaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattagc-ctctctcat-gaaataggagaatactaac--------actag |
18967964 |
T |
|
| Q |
220 |
gagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
271 |
Q |
| |
|
||||||||||||| ||||||||| ||| |||| ||||||||| |||||||| |
|
|
| T |
18967963 |
gagaaacctcacaagagaaactatatttcctctttatatttttcctctcact |
18967912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 255
Target Start/End: Complemental strand, 30986788 - 30986552
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaa---cccctcaacaaataaggggaaaaaa--ccacggggcaagagtagagaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
30986788 |
ataagagacgagaaaagaggaactgaacgcacaatattt-acgtggaaagtacccctcaacaaataaggaaaaaaaaaaccacggggcaagagtagagaa |
30986690 |
T |
|
| Q |
118 |
ctttcactaagtggaagaaattacaggacct--ctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaa |
215 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||| |||| | |
|
|
| T |
30986689 |
ctttcactaagtggaagaaattgcaggacctctctctaaatgcaaggagagtacaattaccactctctcttgtaaatagaagaat----actgacactac |
30986594 |
T |
|
| Q |
216 |
ctaggagaaacctca-caggagaaactaatt-tttctctcta |
255 |
Q |
| |
|
||||||||||||||| ||||||||||| || |||||||||| |
|
|
| T |
30986593 |
ctaggagaaacctcatgaggagaaactatttctttctctcta |
30986552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 32 - 152
Target Start/End: Complemental strand, 21966816 - 21966698
Alignment:
| Q |
32 |
gagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtgg |
131 |
Q |
| |
|
||||||||||||||| |||| | ||||||| | ||||||||||||||| |||||| |||||||| | | ||||||||||||||||||||||||||| ||| |
|
|
| T |
21966816 |
gagaaaagaggaactaaacataaaatattt-atgtggaaacccctcaataaataaagggaaaaatc-atggggcaagagtagagaactttcactaaatgg |
21966719 |
T |
|
| Q |
132 |
aagaaattacaggacctctct |
152 |
Q |
| |
|
||||||||| | ||||||||| |
|
|
| T |
21966718 |
aagaaattataagacctctct |
21966698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 23012542 - 23012683
Alignment:
| Q |
23 |
ataagagacgagaaaa-gaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaacttt |
121 |
Q |
| |
|
|||||||||||||||| || ||| |||||||||| ||||| |||||||||| | ||| || |||||||||||| ||| ||| ||||||||||||||||| |
|
|
| T |
23012542 |
ataagagacgagaaaaagaagaattgaacacacattattt-acgtggaaactcgtcacaaattaaggggaaaaa-ccatggg-caagagtagagaacttt |
23012638 |
T |
|
| Q |
122 |
cactaagtggaagaaattacaggacctctctaaatacaaggagag |
166 |
Q |
| |
|
||||||||| ||||||| || ||||||| ||||||||| ||||| |
|
|
| T |
23012639 |
cactaagtgagagaaatttcaagacctctttaaatacaatgagag |
23012683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 30986478 - 30986430
Alignment:
| Q |
338 |
catgctatttatactagtgaaagagtcatgccccaaccaattgcattta |
386 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||| |||||| |
|
|
| T |
30986478 |
catgctatttatattagtgaaagagccatgccccaaccaattacattta |
30986430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 377
Target Start/End: Complemental strand, 30966605 - 30966566
Alignment:
| Q |
338 |
catgctatttatactagtgaaagagtcatgccccaaccaa |
377 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30966605 |
catgctatttatactagtgaaagagccatgccccaaccaa |
30966566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 6174185 - 6174235
Alignment:
| Q |
116 |
aactttcactaagtggaagaaattacaggacctctctaaatacaaggagag |
166 |
Q |
| |
|
|||||||| ||||||| |||||||||| |||||||||||||||||| |||| |
|
|
| T |
6174185 |
aactttcattaagtgggagaaattacaagacctctctaaatacaagtagag |
6174235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 314; Significance: 1e-177; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 23 - 477
Target Start/End: Original strand, 29585341 - 29585787
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585341 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
29585440 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
29585441 |
actaagtggaagaaattacaggacctctctctaactacaaagagagtacaattaccactctctcttataaataggagaatactaactaatacaaactagg |
29585540 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29585541 |
agaaacctcacaggagaaactaatttttctctctatatttttcctctcactactctagacaagctttacttgttgttgtgttgttactgatttgggatga |
29585640 |
T |
|
| Q |
320 |
gtagaatggtgcaa-gggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggcagcgtgtgaattttcaactctgcatagt |
418 |
Q |
| |
|
| ||| ||| || ||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
29585641 |
--tgtgtggaacaatggtaca----------aatagtgaaagagccatgccccaaccaattgcatttatggcagcgtgtgaattttcaactttgcatagt |
29585728 |
T |
|
| Q |
419 |
aactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataaca |
477 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585729 |
aactttccatgtgaacataaaaactacatgccaacatgttttactgccatgtgataaca |
29585787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 23 - 350
Target Start/End: Complemental strand, 41718686 - 41718357
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718686 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
41718587 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
41718586 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacacaaactagg |
41718487 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatgag |
320 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718486 |
agaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatgag |
41718387 |
T |
|
| Q |
321 |
tagaatggtgcaagggacatgctatttata |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
41718386 |
tagaatggtgcaagggacatgctatttata |
41718357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 23 - 350
Target Start/End: Complemental strand, 41723412 - 41723083
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723412 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
41723313 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
41723312 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacacaaactagg |
41723213 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatgag |
320 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723212 |
agaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatgag |
41723113 |
T |
|
| Q |
321 |
tagaatggtgcaagggacatgctatttata |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
41723112 |
tagaatggtgcaagggacatgctatttata |
41723083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 23 - 319
Target Start/End: Complemental strand, 34352524 - 34352226
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352524 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
34352425 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34352424 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacacaaactagg |
34352325 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
319 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352324 |
agaaatctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
34352226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 23 - 319
Target Start/End: Complemental strand, 34360232 - 34359934
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34360232 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtagaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
34360133 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34360132 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacacaaactagg |
34360033 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
319 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34360032 |
agaaatctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
34359934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 299; Significance: 1e-168; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 23 - 477
Target Start/End: Original strand, 2817304 - 2817748
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||| || |
|
|
| T |
2817304 |
ataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg-aaaaaaccacagggcaagagtaaagaactctc |
2817402 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctct--tataaataggagaatacaaactaacacaaacta |
218 |
Q |
| |
|
|||||||||||||||||||| || |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |||||||| |
|
|
| T |
2817403 |
actaagtggaagaaattacaagaactctctctaaatacaaggagagtacaatcaccactctctctcttataaataggagaatactaactaatacaaacta |
2817502 |
T |
|
| Q |
219 |
ggagaaacctcacaggagaaactaatttttctctctatattttttctctcactatc-taaacaagctttacttgttcttgtgttgttactgatttgggat |
317 |
Q |
| |
|
|||||||| || |||| ||||||||||||||||||||| || | |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2817503 |
ggagaaac--------------tatttttcctctctatattttttctctcattaccctaaacaagttttacttgttcttgtgttgttactgatttgggat |
2817588 |
T |
|
| Q |
318 |
gagtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggcagcgtgtgaattttcaactctgcatag |
417 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2817589 |
gagtagaatggtgcaagggacatgctatgtatactagtgaaagagccatgccccaaccaattgcatttatggcagcgtgtgaattttcaactttgcatag |
2817688 |
T |
|
| Q |
418 |
taactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataaca |
477 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2817689 |
taacttcccatgtgaacatagaaattacatgccaacatattttactgccatgtgataaca |
2817748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 23 - 318
Target Start/End: Original strand, 5823316 - 5823613
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823316 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
5823415 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5823416 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacacaaactagg |
5823515 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
318 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823516 |
agaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
5823613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 23 - 319
Target Start/End: Original strand, 5818554 - 5818852
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818554 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaactaataaggggaaaaaaccacggggcaagagtagagaactttc |
5818653 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5818654 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacacaaactagg |
5818753 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
319 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818754 |
agaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
5818852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 23 - 273
Target Start/End: Complemental strand, 54546159 - 54545906
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
54546159 |
ataagagatgagaaaagaggaactgaacatacaatattt-acgtggaaacccctcaacaaataaggggaaaaaaccacggggctagagtagagaactttc |
54546061 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacct--ctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaa--actaacacaaacta |
218 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| |
|
|
| T |
54546060 |
actaagtggatgaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatacaaacactaacactaccta |
54545961 |
T |
|
| Q |
219 |
ggagaaacctcacaggagaaactaatttttctctctatattttttctctcactat |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
54545960 |
ggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
54545906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 24659177 - 24659287
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
24659177 |
ataagagatgagaaaagaggaactgaacacacaacattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagt--agaactttc |
24659274 |
T |
|
| Q |
123 |
actaagtggaaga |
135 |
Q |
| |
|
||||||||||||| |
|
|
| T |
24659275 |
actaagtggaaga |
24659287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 31204819 - 31204950
Alignment:
| Q |
35 |
aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacgg-ggcaagagtagagaactttcactaagtggaa |
133 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||| | |
|
|
| T |
31204819 |
aaaagaggaactgaactcacaatattt-acgtggaaacccctcaacaaataagaggaaaaaatcacggaggcaatagtagagaactttcactaagtggga |
31204917 |
T |
|
| Q |
134 |
gaaattacaggacctctctaaatacaaggagag |
166 |
Q |
| |
|
|||||||| ||||||||||||| |||||||| |
|
|
| T |
31204918 |
aaaattacaaaacctctctaaatataaggagag |
31204950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 4579327 - 4579254
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaa |
96 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4579327 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaa |
4579254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 147 - 271
Target Start/End: Original strand, 24671187 - 24671301
Alignment:
| Q |
147 |
ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactaattt |
246 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| || |
|
|
| T |
24671187 |
ctctctaaatacaaggagagacaaattacc-ctctctcttg-aaataggagaatactaac--------actaggagaaacctcacaggagaaactatatt |
24671276 |
T |
|
| Q |
247 |
ttctctctatattttttctctcact |
271 |
Q |
| |
|
| |||||||||||||| |||||||| |
|
|
| T |
24671277 |
tcctctctatatttttcctctcact |
24671301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 35977255 - 35977103
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtaga-gaacttt |
121 |
Q |
| |
|
||||||| |||||||||| || |||||| ||||||||| |||| ||| || |||||| ||| |||||||| ||| |||||||||| | || ||| |
|
|
| T |
35977255 |
ataagaggtgagaaaagagaaattgaacaaacaatattt-acgtaaaaaaccatcaacatata--gggaaaaactcacttggcaagagtaaaagagtttt |
35977159 |
T |
|
| Q |
122 |
cactaagtggaagaaattacaggac--ctctctaaatacaaggagagtacaattac |
175 |
Q |
| |
|
|||||||||||| |||||||| ||| |||||||||||||||||||| |||||||| |
|
|
| T |
35977158 |
cactaagtggaaaaaattacaagacttctctctaaatacaaggagagaacaattac |
35977103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 4579177 - 4579126
Alignment:
| Q |
220 |
gagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
271 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
4579177 |
gagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
4579126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 23 - 318
Target Start/End: Original strand, 9439413 - 9439710
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439413 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
9439512 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9439513 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacacaaactagg |
9439612 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
318 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439613 |
agaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
9439710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 23 - 318
Target Start/End: Original strand, 9444133 - 9444430
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444133 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
9444232 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctctct--aaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactagg |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9444233 |
actaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacacaaactagg |
9444332 |
T |
|
| Q |
221 |
agaaacctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
318 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444333 |
agaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
9444430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 148; Significance: 6e-78; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 23 - 271
Target Start/End: Original strand, 16183672 - 16183913
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183672 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
16183771 |
T |
|
| Q |
123 |
actaagtggaaga-aattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactag |
219 |
Q |
| |
|
||||||||||||| ||||||| ||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| ||||| |
|
|
| T |
16183772 |
actaagtggaagacaattacaagacctctctctaaatacaaggagagacaaattacc-ctctctctt-gaaataggagaatactaac--------actag |
16183861 |
T |
|
| Q |
220 |
gagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
271 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
16183862 |
gagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
16183913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 32 - 272
Target Start/End: Complemental strand, 30235289 - 30235043
Alignment:
| Q |
32 |
gagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaa-ccacggggcaagagtagagaactttcactaagtg |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||||| |||||||| ||| | |
|
|
| T |
30235289 |
gagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaacgaataaggggaaaaaaaccacgggataagagtagaaaactttcaataacta |
30235191 |
T |
|
| Q |
131 |
gaagaaattacaggacctctct---aaatacaaggagagtacaattaccactctctcttataaataggagaatacaa--actaacacaaactaggagaaa |
225 |
Q |
| |
|
|||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||| |||||||| | || |||||| |
|
|
| T |
30235190 |
gaagaaattacaggacctctctcctatttataaggagagtacaattaccactctctcttataaataggagaatacaaacactaacactacgtaagagaaa |
30235091 |
T |
|
| Q |
226 |
cctca-caggagaaactaatttttctctctatattttttctctcacta |
272 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
30235090 |
cctcataaggagaaactaatttttctctctatatttttcctctcacta |
30235043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 8140005 - 8140183
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||| |||||||||| |||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||| |||| |||| |||| ||||||| |
|
|
| T |
8140005 |
ataagagatgagaaaagagaaactgaacgcacaatattt-atgtggaaacccctcaacaaataaggggagaaaaccatggggtaagattagaaaactttc |
8140103 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
202 |
Q |
| |
|
||| |||||||||||||| | ||| |||||| ||||||||||||| ||||||| ||||||||| |||||||||||||| |
|
|
| T |
8140104 |
actcagtggaagaaattataagacctctctcttaatacaaggagagacaaattacc-ctctctctt-gaaataggagaatac |
8140183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 8138501 - 8138645
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| || || | |||||||||||| |||||| ||||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
8138501 |
ataagagacgagaaaagaaaaacttaacacacagtaatt-atgtggaaaccccttaacaaacaaggggagaaaaccacgaggcaagattagagaactttc |
8138599 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacct--ctctaaatacaaggagag |
166 |
Q |
| |
|
||||| |||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
8138600 |
actaaatggaagaaattacaagacctccctctaaatacaaggagag |
8138645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 30234974 - 30234920
Alignment:
| Q |
337 |
acatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggca |
391 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
30234974 |
acatgctatttatactagtgaaagagccatgccccaaccaattacatttatggca |
30234920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 5102678 - 5102749
Alignment:
| Q |
68 |
gaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaatta |
140 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||| || ||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
5102678 |
gaaaaccctcaacaaataaggggaaaaa-ccatggagcaagagtagataacttttactaagtgggagaaatta |
5102749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 36528456 - 36528529
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaac |
97 |
Q |
| |
|
|||||||| ||||| ||||||| ||||||||||||| |||||||||||||||||| || ||||||| ||||||| |
|
|
| T |
36528456 |
ataagagatgagaatagaggaattgaacacacaata-tttacgtggaaacccctccacgaataaggaaaaaaaac |
36528529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 31233730 - 31233821
Alignment:
| Q |
109 |
agtagagaactttcactaagtggaagaaattacaggacctctctaaatacaaggagagtacaattaccactctctcttataaataggagaata |
201 |
Q |
| |
|
||||||||| |||||| |||| ||||||||||| | ||||||||||| ||| |||||||||||| |||||| ||||| |||||| |||||| |
|
|
| T |
31233730 |
agtagagaattttcaccaagttaaagaaattacatggcctctctaaat-caaagagagtacaattgtcactctttcttaaaaatagaagaata |
31233821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 23 - 271
Target Start/End: Original strand, 27267 - 27508
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27267 |
ataagagacgagaaaagagaaactgaacacacaatactttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
27366 |
T |
|
| Q |
123 |
actaagtggaaga-aattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactag |
219 |
Q |
| |
|
||||||||||||| ||||||| || |||||||||||||||||||| |||||||| |||||||| ||||||| |||||| ||| ||||| |
|
|
| T |
27367 |
actaagtggaagacaattacaatacttctctctaaatacaaggagagacaaattacca-tctctctt-gaaataggtgaatactaac--------actag |
27456 |
T |
|
| Q |
220 |
gagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
271 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
27457 |
gagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
27508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 23 - 271
Target Start/End: Complemental strand, 46191505 - 46191266
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
46191505 |
ataagagacgagaaaagaggaactgaacaca--atattttacgtggaaacccctcaacaaataaggggaaaaaaccacgggacaagagtagagaactttc |
46191408 |
T |
|
| Q |
123 |
actaagtggaaga-aattacaggac--ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactag |
219 |
Q |
| |
|
||||||||||||| ||||||| ||| ||||||||||| |||||||| ||||||| ||||||||| |||||||||||||| ||| ||||| |
|
|
| T |
46191407 |
actaagtggaagacaattacaagacttctctctaaatagaaggagagacaaattacc-ctctctctt-gaaataggagaatactaac--------actag |
46191318 |
T |
|
| Q |
220 |
gagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
271 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
46191317 |
gagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
46191266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 30697156 - 30697300
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
30697156 |
ataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataaggggaaaaagccacgtggcaagagtagagaactttc |
30697254 |
T |
|
| Q |
123 |
actaagtggaagaaattacaggacctc--tctaaatacaaggagag |
166 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
30697255 |
actaagtggaagaaattacaagacctctttctaaatacaaggagag |
30697300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 4130360 - 4130215
Alignment:
| Q |
23 |
ataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttc |
122 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4130360 |
ataagtgacgagaaaagaggaactgaacacacaaaattt-acgtggaaatccctcaacaaataaagggaaaaaaccacggggcaagagtagagaactttc |
4130262 |
T |
|
| Q |
123 |
actaagtggaaga-aattacaggac--ctctctaaatacaaggagag |
166 |
Q |
| |
|
||||||||||||| ||||||| ||| |||||||||||||||||||| |
|
|
| T |
4130261 |
actaagtggaagataattacaagacttctctctaaatacaaggagag |
4130215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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