View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5461_high_31 (Length: 249)

Name: NF5461_high_31
Description: NF5461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5461_high_31
NF5461_high_31
[»] chr1 (45 HSPs)
chr1 (1-239)||(44915406-44915646)
chr1 (24-234)||(51916751-51916960)
chr1 (24-198)||(7337798-7337971)
chr1 (19-236)||(27456319-27456544)
chr1 (24-176)||(45415343-45415494)
chr1 (29-230)||(31983969-31984176)
chr1 (24-180)||(34878425-34878579)
chr1 (44-198)||(29738771-29738924)
chr1 (31-198)||(49626701-49626866)
chr1 (48-179)||(10776612-10776744)
chr1 (33-198)||(11462582-11462747)
chr1 (94-198)||(23291778-23291881)
chr1 (19-197)||(15435009-15435185)
chr1 (24-197)||(1742065-1742236)
chr1 (59-198)||(32394818-32394955)
chr1 (45-198)||(5983641-5983794)
chr1 (45-198)||(35462172-35462325)
chr1 (91-170)||(36894404-36894483)
chr1 (24-137)||(3228054-3228166)
chr1 (29-198)||(18939111-18939277)
chr1 (24-116)||(35484595-35484686)
chr1 (55-198)||(8212045-8212187)
chr1 (24-198)||(21947753-21947925)
chr1 (44-141)||(7836958-7837054)
chr1 (91-176)||(45789415-45789498)
chr1 (113-197)||(31918861-31918945)
chr1 (24-180)||(44543057-44543209)
chr1 (24-198)||(14872423-14872597)
chr1 (24-198)||(26535184-26535351)
chr1 (48-177)||(15836001-15836128)
chr1 (21-174)||(21686654-21686804)
chr1 (91-180)||(50377177-50377264)
chr1 (24-180)||(940149-940303)
chr1 (30-180)||(568937-569085)
chr1 (61-180)||(9341545-9341662)
chr1 (44-106)||(41176986-41177047)
chr1 (169-230)||(7836890-7836951)
chr1 (24-180)||(32679253-32679407)
chr1 (94-177)||(34413247-34413330)
chr1 (129-176)||(35484548-35484595)
chr1 (47-230)||(48749997-48750176)
chr1 (112-198)||(13144947-13145032)
chr1 (91-175)||(34528569-34528650)
chr1 (48-177)||(16161640-16161767)
chr1 (105-197)||(27580263-27580356)
[»] chr5 (30 HSPs)
chr5 (24-227)||(7036008-7036210)
chr5 (44-198)||(6012273-6012426)
chr5 (44-198)||(13007029-13007182)
chr5 (24-193)||(31391896-31392065)
chr5 (24-198)||(38597578-38597750)
chr5 (24-198)||(26825209-26825384)
chr5 (45-198)||(9113860-9114012)
chr5 (30-177)||(26878235-26878380)
chr5 (48-198)||(34945226-34945375)
chr5 (24-230)||(13421724-13421927)
chr5 (26-180)||(38007140-38007291)
chr5 (45-198)||(6216696-6216852)
chr5 (38-198)||(8096633-8096790)
chr5 (60-177)||(2979469-2979584)
chr5 (24-198)||(25979938-25980111)
chr5 (44-197)||(11074036-11074188)
chr5 (24-198)||(11977072-11977245)
chr5 (24-202)||(15571266-15571443)
chr5 (91-176)||(10722619-10722705)
chr5 (60-177)||(39567112-39567227)
chr5 (93-152)||(11867529-11867587)
chr5 (48-230)||(14082467-14082655)
chr5 (47-177)||(14211037-14211162)
chr5 (24-176)||(24229942-24230095)
chr5 (19-180)||(7929974-7930130)
chr5 (66-180)||(8088366-8088477)
chr5 (20-197)||(41630287-41630454)
chr5 (134-180)||(4771030-4771075)
chr5 (117-177)||(19103630-19103689)
chr5 (125-177)||(28541069-28541120)
[»] chr7 (29 HSPs)
chr7 (24-198)||(42978391-42978565)
chr7 (24-198)||(37837594-37837766)
chr7 (24-198)||(30756954-30757127)
chr7 (24-196)||(19404892-19405062)
chr7 (20-176)||(9450294-9450449)
chr7 (24-198)||(47590097-47590267)
chr7 (44-198)||(34899742-34899892)
chr7 (44-198)||(12141442-12141596)
chr7 (24-198)||(39171726-39171900)
chr7 (24-198)||(40992965-40993138)
chr7 (24-171)||(8013627-8013773)
chr7 (44-230)||(24770058-24770243)
chr7 (24-198)||(13797067-13797239)
chr7 (44-198)||(48061225-48061379)
chr7 (45-176)||(48316969-48317099)
chr7 (47-230)||(35132757-35132937)
chr7 (87-198)||(45349938-45350048)
chr7 (76-161)||(19296713-19296797)
chr7 (60-177)||(22742757-22742872)
chr7 (112-180)||(5792667-5792735)
chr7 (47-230)||(1749248-1749426)
chr7 (18-180)||(5078548-5078707)
chr7 (24-173)||(38798575-38798717)
chr7 (24-90)||(45350434-45350500)
chr7 (119-177)||(48930657-48930714)
chr7 (24-180)||(4529862-4530017)
chr7 (76-177)||(24351000-24351099)
chr7 (91-180)||(25255087-25255174)
chr7 (20-180)||(39328946-39329105)
[»] chr6 (25 HSPs)
chr6 (24-198)||(12170277-12170450)
chr6 (24-198)||(33053303-33053476)
chr6 (15-198)||(605977-606159)
chr6 (24-198)||(3913709-3913881)
chr6 (45-197)||(23128421-23128572)
chr6 (18-180)||(30894414-30894573)
chr6 (54-198)||(34018372-34018515)
chr6 (44-198)||(68136-68288)
chr6 (28-198)||(127463-127625)
chr6 (21-176)||(32059688-32059840)
chr6 (44-158)||(29320037-29320150)
chr6 (20-172)||(29255603-29255754)
chr6 (44-176)||(7515358-7515490)
chr6 (128-198)||(32327352-32327422)
chr6 (91-180)||(30608667-30608754)
chr6 (60-180)||(32191885-32192004)
chr6 (24-123)||(32328793-32328891)
chr6 (21-69)||(9721773-9721821)
chr6 (134-198)||(11321604-11321668)
chr6 (100-180)||(34222653-34222731)
chr6 (24-109)||(9723602-9723687)
chr6 (60-177)||(545843-545957)
chr6 (32-137)||(31852370-31852474)
chr6 (94-177)||(1523259-1523339)
chr6 (91-180)||(24227864-24227954)
[»] chr4 (39 HSPs)
chr4 (24-198)||(2520578-2520751)
chr4 (24-198)||(21686376-21686548)
chr4 (24-234)||(54021662-54021879)
chr4 (24-198)||(5119139-5119313)
chr4 (24-198)||(26633806-26633978)
chr4 (24-176)||(19853669-19853819)
chr4 (48-198)||(22558599-22558749)
chr4 (44-198)||(4142890-4143042)
chr4 (44-198)||(22611005-22611157)
chr4 (24-198)||(53810829-53811002)
chr4 (24-179)||(9165196-9165351)
chr4 (24-180)||(35348107-35348261)
chr4 (24-198)||(45418330-45418500)
chr4 (24-179)||(9178158-9178312)
chr4 (84-195)||(32766374-32766485)
chr4 (23-197)||(26091050-26091222)
chr4 (24-198)||(13633915-13634089)
chr4 (24-202)||(10496143-10496316)
chr4 (42-194)||(43510018-43510169)
chr4 (24-176)||(24099227-24099379)
chr4 (24-135)||(48257647-48257757)
chr4 (24-198)||(47320537-47320709)
chr4 (91-180)||(10259048-10259136)
chr4 (44-180)||(22300666-22300800)
chr4 (60-180)||(43095471-43095586)
chr4 (91-176)||(56040801-56040888)
chr4 (29-170)||(53443932-53444070)
chr4 (24-198)||(33920853-33921025)
chr4 (126-198)||(40066190-40066262)
chr4 (20-177)||(27651745-27651900)
chr4 (60-180)||(51888370-51888488)
chr4 (91-166)||(21231604-21231678)
chr4 (91-165)||(21225344-21225417)
chr4 (21-230)||(36194511-36194717)
chr4 (60-198)||(22038936-22039070)
chr4 (112-180)||(9713796-9713863)
chr4 (94-166)||(22063948-22064019)
chr4 (130-180)||(9634580-9634630)
chr4 (91-135)||(29121876-29121920)
[»] chr8 (35 HSPs)
chr8 (24-176)||(31013726-31013877)
chr8 (24-198)||(27110597-27110770)
chr8 (18-230)||(37971072-37971280)
chr8 (32-236)||(28897502-28897712)
chr8 (24-169)||(10377480-10377623)
chr8 (91-197)||(14545036-14545143)
chr8 (44-198)||(23230447-23230600)
chr8 (24-166)||(8980980-8981121)
chr8 (29-176)||(7883395-7883541)
chr8 (42-179)||(3673247-3673381)
chr8 (18-175)||(25191223-25191378)
chr8 (24-176)||(40211460-40211612)
chr8 (30-198)||(1239537-1239703)
chr8 (24-140)||(17693805-17693919)
chr8 (24-180)||(45445963-45446117)
chr8 (48-230)||(7677375-7677562)
chr8 (44-197)||(20559880-20560030)
chr8 (44-197)||(20571442-20571592)
chr8 (29-202)||(15344094-15344265)
chr8 (29-202)||(15433159-15433330)
chr8 (29-202)||(15524463-15524634)
chr8 (55-180)||(29937929-29938052)
chr8 (44-198)||(20553379-20553531)
chr8 (24-141)||(1236883-1236999)
chr8 (24-109)||(8412571-8412655)
chr8 (23-177)||(24099417-24099567)
chr8 (112-198)||(24186792-24186878)
chr8 (112-177)||(14585569-14585634)
chr8 (24-123)||(29617665-29617763)
chr8 (95-198)||(40619206-40619307)
chr8 (94-176)||(18890861-18890942)
chr8 (91-198)||(44091881-44091986)
chr8 (31-180)||(33214783-33214930)
chr8 (29-198)||(36948571-36948738)
chr8 (91-180)||(8443672-8443761)
[»] chr3 (52 HSPs)
chr3 (24-198)||(10232851-10233024)
chr3 (24-198)||(21431406-21431578)
chr3 (24-198)||(47895932-47896105)
chr3 (24-180)||(35865087-35865241)
chr3 (42-197)||(54148787-54148941)
chr3 (24-174)||(9998247-9998397)
chr3 (44-198)||(6954831-6954984)
chr3 (24-198)||(10229255-10229430)
chr3 (24-198)||(10108019-10108190)
chr3 (24-198)||(48650869-48651043)
chr3 (20-174)||(40487102-40487254)
chr3 (54-234)||(20608989-20609175)
chr3 (24-180)||(33579649-33579803)
chr3 (24-176)||(45568601-45568752)
chr3 (20-180)||(47042205-47042364)
chr3 (24-198)||(36461566-36461739)
chr3 (24-198)||(40556492-40556665)
chr3 (44-198)||(52923252-52923403)
chr3 (26-176)||(9797686-9797833)
chr3 (24-180)||(23800062-23800220)
chr3 (24-172)||(7449063-7449209)
chr3 (24-172)||(7457205-7457351)
chr3 (47-180)||(29921856-29921988)
chr3 (47-180)||(29971009-29971141)
chr3 (24-121)||(38545616-38545712)
chr3 (24-176)||(43488747-43488905)
chr3 (44-167)||(32701299-32701421)
chr3 (48-176)||(21533966-21534092)
chr3 (24-180)||(50194437-50194591)
chr3 (20-198)||(31271942-31272119)
chr3 (55-176)||(26275951-26276070)
chr3 (105-177)||(37040632-37040704)
chr3 (24-180)||(46220459-46220613)
chr3 (24-202)||(12149915-12150090)
chr3 (94-177)||(42460596-42460679)
chr3 (112-198)||(36910776-36910862)
chr3 (24-180)||(629059-629214)
chr3 (24-197)||(43016636-43016808)
chr3 (47-177)||(21289977-21290104)
chr3 (30-177)||(7546397-7546544)
chr3 (91-180)||(29239185-29239273)
chr3 (98-139)||(44804888-44804929)
chr3 (91-180)||(53508069-53508156)
chr3 (192-236)||(53099746-53099790)
chr3 (125-180)||(20987952-20988007)
chr3 (125-236)||(51923611-51923720)
chr3 (134-180)||(1649309-1649355)
chr3 (98-180)||(29249098-29249178)
chr3 (60-145)||(4821624-4821708)
chr3 (125-198)||(9319937-9320010)
chr3 (44-176)||(12050804-12050936)
chr3 (147-198)||(18010921-18010973)
[»] chr2 (45 HSPs)
chr2 (24-203)||(7646263-7646442)
chr2 (24-176)||(36943281-36943432)
chr2 (23-198)||(9169393-9169566)
chr2 (44-198)||(4098914-4099067)
chr2 (24-198)||(7448039-7448211)
chr2 (44-198)||(4778564-4778717)
chr2 (20-198)||(29279706-29279882)
chr2 (20-198)||(31788243-31788420)
chr2 (42-175)||(17994874-17995006)
chr2 (24-198)||(43397256-43397427)
chr2 (30-176)||(18763265-18763409)
chr2 (24-176)||(1421462-1421617)
chr2 (24-198)||(11985366-11985538)
chr2 (45-198)||(8809094-8809245)
chr2 (38-230)||(37876701-37876892)
chr2 (30-180)||(12648078-12648226)
chr2 (44-166)||(27097573-27097693)
chr2 (24-198)||(4904281-4904444)
chr2 (29-181)||(7678024-7678181)
chr2 (24-138)||(12677491-12677604)
chr2 (48-198)||(38444982-38445130)
chr2 (91-180)||(11833341-11833430)
chr2 (94-230)||(10237318-10237452)
chr2 (91-195)||(19062491-19062594)
chr2 (71-174)||(32448782-32448882)
chr2 (136-198)||(31128915-31128977)
chr2 (91-180)||(1415422-1415510)
chr2 (60-177)||(14955350-14955465)
chr2 (24-137)||(35220122-35220231)
chr2 (107-198)||(4041730-4041820)
chr2 (44-198)||(5428003-5428156)
chr2 (91-198)||(29173855-29173962)
chr2 (24-107)||(31128974-31129056)
chr2 (20-198)||(25509200-25509378)
chr2 (39-177)||(37994081-37994216)
chr2 (94-195)||(6436468-6436568)
chr2 (81-177)||(3308787-3308881)
chr2 (60-180)||(18107891-18108008)
chr2 (91-180)||(30400191-30400281)
chr2 (19-85)||(42698922-42698988)
chr2 (44-180)||(24461250-24461382)
chr2 (64-180)||(29574787-29574901)
chr2 (112-198)||(36691753-36691837)
chr2 (115-180)||(23933775-23933839)
chr2 (93-170)||(41694474-41694550)
[»] scaffold0127 (1 HSPs)
scaffold0127 (24-198)||(15273-15445)
[»] scaffold0088 (1 HSPs)
scaffold0088 (24-198)||(50567-50740)
[»] scaffold0026 (1 HSPs)
scaffold0026 (24-198)||(71999-72172)
[»] scaffold0017 (1 HSPs)
scaffold0017 (24-198)||(32883-33056)
[»] scaffold0445 (1 HSPs)
scaffold0445 (24-180)||(1125-1279)
[»] scaffold0219 (1 HSPs)
scaffold0219 (25-173)||(14998-15145)
[»] scaffold0262 (1 HSPs)
scaffold0262 (29-198)||(1953-2120)
[»] scaffold0121 (1 HSPs)
scaffold0121 (55-234)||(31364-31548)
[»] scaffold0009 (1 HSPs)
scaffold0009 (24-180)||(58233-58387)
[»] scaffold0884 (1 HSPs)
scaffold0884 (44-170)||(2134-2260)
[»] scaffold0049 (1 HSPs)
scaffold0049 (91-180)||(71438-71524)
[»] scaffold0634 (1 HSPs)
scaffold0634 (24-202)||(8295-8470)
[»] scaffold0603 (1 HSPs)
scaffold0603 (47-198)||(7521-7669)
[»] scaffold0888 (1 HSPs)
scaffold0888 (96-177)||(1831-1911)
[»] scaffold0554 (1 HSPs)
scaffold0554 (45-180)||(10681-10812)
[»] scaffold0136 (2 HSPs)
scaffold0136 (126-198)||(37929-38000)
scaffold0136 (147-198)||(10176-10227)
[»] scaffold0492 (1 HSPs)
scaffold0492 (48-177)||(12721-12848)
[»] scaffold0087 (1 HSPs)
scaffold0087 (24-137)||(25525-25637)
[»] scaffold0618 (1 HSPs)
scaffold0618 (91-198)||(7924-8029)
[»] scaffold0154 (1 HSPs)
scaffold0154 (42-170)||(25132-25261)


Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 44915406 - 44915646
Alignment:
Q  1 tttcgtaagagttgaatttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  44915406 tttcgtaagagttgaatttctaattttctagtgagaaaaatttcaacttctctctaaactttctttctcattcattcatcgaggaggggttggttttagg 44915505  T
Q  101 tcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggtttt--cacatatataaggcttttccttttgtg 198  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  44915506 tcattttttggcttaaaatcatcactctacatcttttttcctcttatctttccatctaaataagtggttttcgcatatatataaggcttttccttttgtg 44915605  T
Q  199 atttcattgtctaattgtggcgttgtgttgttagtcatatt 239  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  44915606 atttcatcgtctaattgtggcgttgtgatgttagtcatatt 44915646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 51916960 - 51916751
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| ||||| || || |||||||||||||||| |||  |||| |||||||||| |||||||||  |||||||| |||||||||||     
T  51916960 ttttttagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggt-ggttttaggctattttttgacctaaaatcact 51916862  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttg 223  Q
      |||||||||||||| ||||| |||||| |||||||||||||||||||| ||| || | | |||||||||||||||||||| ||||||||  || |||     
T  51916861 catctacatctttttttctcttttctttcaatctaaataagtggttttcaaataaatcaagtttttccttttgtgatttcatcgtctaattacggtgtta 51916762  T
Q  224 tgttgttagtc 234  Q
    |||||||||||    
T  51916761 tgttgttagtc 51916751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 7337971 - 7337798
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||| | ||| ||||||||||| |||||||||||||||| |||  |||| |||||||| | |||| || |||||||||||  ||| |||||||    
T  7337971 ttttctagtgaaagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggat-ggttctatgtcattttttgatctagaatcacc 7337873  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  7337872 cctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 7337798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 27456319 - 27456544
Alignment:
Q  19 tctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttgg-cctaaa 117  Q
    |||| |||| |||||||||||| ||||||||||  |||||||||||||||| |||| || | |||||||| | |||||||  || ||||||   ||||||    
T  27456319 tctagttttttagtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgaggagggat-ggttttaactctttttttttacctaaa 27456417  T
Q  118 atcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcc--------ttttgtgatttcattgtc 209  Q
    |||||  ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||| | | | ||||        |||||||||||||| |||    
T  27456418 atcactcctctacatcttttttcctcttttctttcaatctaaataagtggttttcgcatatattaagttcttccttttgtgtttttgtgatttcatcgtc 27456517  T
Q  210 taattgtggcgttgtgttgttagtcat 236  Q
    |||||| ||||||||||||||||||||    
T  27456518 taattgcggcgttgtgttgttagtcat 27456544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 45415343 - 45415494
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| |||||||||||  ||||||||||||||  |||  | || |||||||||| |||||||||||||||||||  ||| |||||||    
T  45415343 ttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggt-ggttttaggtcattttttgatctagaatcacc 45415441  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
     ||||||||||||||||| ||| |||||| || ||||||||||||||||||||    
T  45415442 cctctacatcttttttccccttttctttcaatttaaataagtggttttcacat 45415494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 230
Target Start/End: Original strand, 31983969 - 31984176
Alignment:
Q  29 tagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 128  Q
    |||||||| ||| | ||||||||| |||||||||||||||  ||   ||||  ||||| ||| ||||||||||||||||||| |||| || |||| ||||    
T  31983969 tagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggt-ggttttaggtcattttttgacctagaagcacctctct 31984067  T
Q  129 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcc-------ttttgtgatttcattgtctaattgtggcgt 221  Q
    ||||||||||| | ||| |||||| ||||||||||||||||||||||||||| | | ||||||       |||||||||||| | |||||| || |||||    
T  31984068 acatctttttttcccttttctttcgatctaaataagtggttttcacatatatcaagtttttccttgtgttttttgtgatttcgtcgtctaagtgcggcgt 31984167  T
Q  222 tgtgttgtt 230  Q
    |||||||||    
T  31984168 tgtgttgtt 31984176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 34878579 - 34878425
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | |||||||||  ||||||||||||||| |||  |||| |||||||||| ||||||||||||||||||| |||| ||||||     
T  34878579 ttttctagtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcact 34878481  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
      ||||||||||||||||  || |||||| || ||||||||||||||||||| ||||    
T  34878480 catctacatcttttttcc-attttctttcaatttaaataagtggttttcacacatat 34878425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 29738924 - 29738771
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    |||| |||| |||||||||||||||| |||  |||| |||||||||| |||||||||||| |||||  |||| ||||||| |||||||||||||| ||      
T  29738924 caacatctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcaattttttacctagaatcacccctctacatctttttcccct 29738826  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  29738825 ttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 29738771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 49626701 - 49626866
Alignment:
Q  31 gtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctac 130  Q
    |||||| ||| | ||||||||| ||||   ||| ||||| |||| |||| |||||||||| |||||||||||||| |||| |||||||||||| |||| |    
T  49626701 gtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggt-ggttttaggtcattctttgacctaaaatcacccctctgc 49626799  T
Q  131 atcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||||||||||| ||| |||||| ||||||||||||| |||||||| |||| | || ||| ||||||||    
T  49626800 atcttttttcccctt-tctttctatctaaataagtgattttcacaaatatcaagcgttttcttttgtg 49626866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 10776744 - 10776612
Alignment:
Q  48 ttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttttt--cctctt 145  Q
    ||||| |||||||||||||||| |||| |||| ||||| |||| |||||||| |||||||||| |||| |||||||  ||||||||||||||  ||| ||    
T  10776744 ttctctctaaactttctttctccttcattcatcgaggaagggt-ggttttagatcattttttgacctagaatcacccatctacatcttttttttcctatt 10776646  T
Q  146 atctttccatctaaataagtggttttcacatata 179  Q
     |||||| |||||||||||||||||| |||||||    
T  10776645 ttctttcaatctaaataagtggtttttacatata 10776612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 198
Target Start/End: Complemental strand, 11462747 - 11462582
Alignment:
Q  33 gagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacat 132  Q
    |||| ||| ||||| ||||| |||||||||||||||| |||  ||||||| ||||||| | |||||||| |||||||| |||| ||||||| |||| |||    
T  11462747 gagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggt-gattttaggttattttttgacctagaatcacccctctgcat 11462649  T
Q  133 cttttttcctc-ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||||||||| | || |||||| |||||||||||||| |||||||| ||| | | |||| ||||||||    
T  11462648 cttttttcccctttttctttcaatctaaataagtgggtttcacatctatcaagttttttcttttgtg 11462582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 23291881 - 23291778
Alignment:
Q  94 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcctt 193  Q
    ||||||||||||||||| |||| ||||||| ||| |||||||||||| |||| |||||| ||||||||||||||||||||||||||| | | |||| |||    
T  23291881 ttttaggtcattttttgacctagaatcacccctcgacatcttttttc-tcttttctttcaatctaaataagtggttttcacatatatcaagttttttctt 23291783  T
Q  194 ttgtg 198  Q
    |||||    
T  23291782 ttgtg 23291778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 15435185 - 15435009
Alignment:
Q  19 tctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaa 118  Q
    |||| |||| || ||||| ||| | ||||||||| | |||| ||||||||  |||| ||||  ||||||||  |||||||||||||||||||  ||| ||    
T  15435185 tctagttttttattgagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggc-ggttttaggtcattttttgatctagaa 15435087  T
Q  119 tcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
    ||| | ||||||||||||||||| ||| |||||| ||||||||||||| |||||||||| || | | ||||||||||||    
T  15435086 tcaaccctctacatcttttttcc-cttttctttcaatctaaataagtgtttttcacataaatcaagtttttccttttgt 15435009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 197
Target Start/End: Original strand, 1742065 - 1742236
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| |  |||||||  |||||||| ||||||| |||  ||||  ||||  ||| ||||||||||||||||||| |||| |||||||    
T  1742065 ttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggt-ggttttaggtcattttttgacctagaatcacc 1742163  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
     |||| |||| |||| || ||| |||||| ||||||||||||||||||||||||||| | | |||| |||||||    
T  1742164 cctctccatc-ttttcccccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgt 1742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 32394818 - 32394955
Alignment:
Q  59 ctttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatcta 158  Q
    ||||||||||| |||  |||| |||||||||| ||||||||||||||||||| | || ||||| | |||| ||||||||| || ||| |||||| |||||    
T  32394818 ctttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacttagaatcatccctctgcatctttttccc-cttttctttcaatcta 32394915  T
Q  159 aataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||| |||||||||||||| ||| | | |||||||||||||    
T  32394916 aatgagtggttttcacatctatcaagtttttccttttgtg 32394955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 5983641 - 5983794
Alignment:
Q  45 aacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc- 143  Q
    |||||||| ||||||||| |||||| |||  |||| |||||||| | |||||||| |||||||||| |||| ||||||   |||||||||||||||| |     
T  5983641 aacttctctctaaactttatttctccttcgttcatcgaggagggat-ggttttagatcattttttgacctagaatcactcgtctacatcttttttcccct 5983739  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| |||||||||| |||||||||||| ||| | | |||| ||||||||    
T  5983740 ttttctttcgatctaaataaatggttttcacatctatcaagtttttgcttttgtg 5983794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 198
Target Start/End: Complemental strand, 35462325 - 35462172
Alignment:
Q  45 aacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcc-taaaatcaccactctacatcttttttcctc 143  Q
    ||||| || |||||||||||||||| |||  | |||||| | |||| ||||||||||||||||||   | || ||||| | ||||||||||||||||| |    
T  35462325 aacttatctctaaactttctttctccttcgtttattgagaatgggt-ggttttaggtcattttttttacatagaatcatccctctacatcttttttcccc 35462227  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| || |||||||||||||||||||| ||| | | |||||||||||||    
T  35462226 ttttctttcaatttaaataagtggttttcacatctatcaagtttttccttttgtg 35462172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 36894483 - 36894404
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttt 170  Q
    ||||| || ||||||||||| |||| | ||||| ||||||||||||||||||||| |||||| |||||||||||||||||    
T  36894483 tggttctaagtcattttttgacctagagtcacccctctacatcttttttcctcttttctttcgatctaaataagtggttt 36894404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 3228054 - 3228166
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||| ||||||| | ||||||||| ||||| ||| |||||| |||| ||||  ||||||||| ||||||||||||||||||  |||| |||||||    
T  3228054 ttttctagttagaaaaactccaacttctccctaaattttatttctccttcattcatcaaggaggggt-ggttttaggtcattttttaacctacaatcacc 3228152  T
Q  124 actctacatctttt 137  Q
      ||||||||||||    
T  3228153 catctacatctttt 3228166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 198
Target Start/End: Original strand, 18939111 - 18939277
Alignment:
Q  29 tagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 128  Q
    |||||||| ||| |||| |||||| ||||  |||||||||| |||| | || |||||| ||| |||||||||||||||||||  ||| ||||||| ||||    
T  18939111 tagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggt-ggttttaggtcattttttgatctagaatcacctctct 18939209  T
Q  129 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     |||| ||||||| ||| |||||| || ||||||||| ||||||||| |||| | | ||||| |||||||    
T  18939210 gcatc-tttttcccctt-tctttcaatttaaataagtagttttcacacatatcaagtttttcattttgtg 18939277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 35484686 - 35484595
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaa 116  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| |||  |||| ||||||||| ||||| |||||||||||||| |||||    
T  35484686 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggg-tggttgtaggtcattttttgacctaa 35484595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 198
Target Start/End: Complemental strand, 8212187 - 8212045
Alignment:
Q  55 taaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttcca 154  Q
    |||| ||| |||||| |||| ||||  ||||||||| | |||||| | ||||||||  ||| ||||||| |||||||||||||||   ||| |||||  |    
T  8212187 taaaatttttttctccttcattcatcaaggaggggt-gcttttagattattttttgatctacaatcacctctctacatcttttttttccttttctttaaa 8212089  T
Q  155 tctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||||||||||||||||||||||| | | ||| |||||||||    
T  8212088 tctaaataagtggttttcacatatatcaagttttcccttttgtg 8212045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 21947925 - 21947753
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| ||||| || || |||||||||||||||| |||  |||| ||||| |||| |||||||||| ||||||   |||| ||||| |    
T  21947925 ttttctagtgagagaaacttcaatttttctctaaactttctttctc-ttcgttcatcgaggatgggt-ggttttaggttatttttaa-cctagaatcatc 21947829  T
Q  124 actctacatctttttt-cctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
      ||||||| |||||| || ||| |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  21947828 catctacatatttttttccccttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 21947753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 7837054 - 7836958
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcc 141  Q
    ||||||||| |||||| ||||||||| |||  |||| ||||| |||| |||||||||||||||||||  ||| ||||||| ||| |||||||||||||    
T  7837054 caacttctctctaaaccttctttctctttcgttcatcgaggaagggt-ggttttaggtcattttttgatctagaatcacccctcgacatcttttttcc 7836958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 45789415 - 45789498
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    |||||||||||||||||||| |||| ||||||| |||| |||| ||||||| ||| |||||| || ||||||||||||||||||||    
T  45789415 tggttttaggtcattttttgacctagaatcacccctctgcatc-tttttcccctt-tctttcaatttaaataagtggttttcacat 45789498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 31918861 - 31918945
Alignment:
Q  113 ctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
    ||||||||| |  ||| |||||||||||||||| ||| || ||||||||||||||||||||||||||| | | |||| |||||||    
T  31918861 ctaaaatcatccatctgcatcttttttcctcttttctatcaatctaaataagtggttttcacatatatcaagttttttcttttgt 31918945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 44543057 - 44543209
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| | ||||||||| ||||  |||| ||||| |||| |||| ||||| |||| | |||||||| ||| |||| |||||||||| |    
T  44543057 ttttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggt-gcttttaggttattctttgacctaaaatcagc 44543155  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
     |||| |||||||||||| ||| |||||| ||||||||||||| |||||||| ||||    
T  44543156 -ctctgcatcttttttcc-ctt-tctttcgatctaaataagtgattttcacaaatat 44543209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 14872423 - 14872597
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| | ||||||||  || ||||||||||||  |||| |||| ||| ||| || |||||| |||||||||||| | || ||||||     
T  14872423 ttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgt-ggttttcggtcattttttgacttagaatcact 14872521  T
Q  124 actctacatc-ttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||| ||||||||  || |||||| || ||||||||||||||| ||| |||| | | |||||| ||||||    
T  14872522 cctctacatctttttttccctttttctttcaatgtaaataagtggtttttacaaatatcaagtttttccatttgtg 14872597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 26535184 - 26535351
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| |  |||||||| ||||||||||| |||| |||  ||||  |||| | || ||||||||||     |||| |||| ||||||     
T  26535184 ttttctagtgagagaaactctaacttctctctaaactttctctctccttcgttcatcaaggatgagt-ggttttaggt-----tttgacctagaatcaca 26535277  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
      |||||||||||||  | ||| |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  26535278 catctacatctttttctc-cttttctttcaatctaaataagtggttttcacatatattaagtttttccttttgtg 26535351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 15836001 - 15836128
Alignment:
Q  48 ttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 147  Q
    ||||| || ||||||||||||| || | ||||  ||||| ||| ||||||||||||||||||| |||| ||||||| || |||||  ||||||  ||| |    
T  15836001 ttctctcttaactttctttctctttgattcatcaaggagaggt-ggttttaggtcattttttgacctagaatcaccgctatacat-atttttctcctttt 15836098  T
Q  148 ctttccatctaaataagtggttttcacata 177  Q
    || || || |||||||||||||||||||||    
T  15836099 ctatcaatttaaataagtggttttcacata 15836128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 21686654 - 21686804
Alignment:
Q  21 taattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatc 120  Q
    ||||||| |||||||| ||| | |||||| |  ||||| |||||||||| |||  |||| |||||| | | | |||||||||||||||||  ||| ||||    
T  21686654 taattttttagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagat-gattttaggtcattttttgatctagaatc 21686752  T
Q  121 accactctacatcttttttcctcttatctttccatctaaataagtggttttcac 174  Q
    ||  |||||||||||||||||  || |||||| || ||||||||||||||||||    
T  21686753 act-ctctacatcttttttccattt-tctttcaatttaaataagtggttttcac 21686804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 50377177 - 50377264
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||||||||||||| |||| ||||| | |||| ||| ||||||||  || |||||| || ||||||||||||||||||||||||    
T  50377177 tggttttaggtcattttttgacctagaatcatccctct-cat-ttttttcccattttctttcaatttaaataagtggttttcacatatat 50377264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 940149 - 940303
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||||||| |  || ||||| ||||| |||||||||| ||   |||| ||||| | || ||||||| ||||||||||  |||| |||||||    
T  940149 ttttttagtgagaaaaactctaaattctctctaaattttctttctcttttcttcatcgaggatgagt-ggttttaagtcatttttta-cctagaatcacc 940246  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
      ||| |||||| ||||| ||| |||||  || ||||||||||||||||||||||||    
T  940247 catctgcatcttgtttccccttttcttttaatttaaataagtggttttcacatatat 940303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 569085 - 568937
Alignment:
Q  30 agtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtca-ttttttggcctaaaatcaccactct 128  Q
    ||||||| ||| |||||||||||  |||| |||||||||| |||| ||||  |||||||| |||||||| ||   ||||||  |||| |||| || ||||    
T  569085 agtgagagaaacttcaacttctctataaa-tttctttctctttcactcatctaggagggggtggttttaagtatgtttttttacctagaatcccccctct 568987  T
Q  129 acatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||| || ||| |||||| ||||||||||||| ||||||| |||||    
T  568986 acatctttttccc-ctt-tctttcaatctaaataagtgattttcacgtatat 568937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 9341545 - 9341662
Alignment:
Q  61 ttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaa 160  Q
    ||||||||| |||| |||| || |||||| |||||||||||||||||||| | || |||||||  | | |||| ||||||||||| |||||| || ||||    
T  9341545 ttctttctctttcactcatcgaagagggggtggttttaggtcattttttgacttagaatcacctgtatgcatc-tttttcctctt-tctttcaatataaa 9341642  T
Q  161 taagtggttttcacatatat 180  Q
    ||||   |||||||||||||    
T  9341643 taagaaattttcacatatat 9341662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 41176986 - 41177047
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattt 106  Q
    ||||||||| |||||||||||||||| |||  |||| ||||||||| ||||||||||||||||    
T  41176986 caacttctctctaaactttctttctccttcgttcatcgaggagggg-tggttttaggtcattt 41177047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 7836951 - 7836890
Alignment:
Q  169 tttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgtt 230  Q
    |||||||||||| | | |||| ||||||||||||||| |||||| || ||||||||||||||    
T  7836951 tttcacatatatcaagttttttcttttgtgatttcatcgtctaagtgcggcgttgtgttgtt 7836890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 32679407 - 32679253
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||||| |||||| || ||||  |||||||||| |||| || | |||||||||| ||||||| ||||||||||| | || ||||| |    
T  32679407 ttttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggt-ggttttatgtcattttttgacatagaatcatc 32679309  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
     |||| || |  ||||  |||| |||||| || |||||||||| ||| |||||||||    
T  32679308 cctctgcaccaatttt-atcttttctttcaatttaaataagtgatttccacatatat 32679253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 34413330 - 34413247
Alignment:
Q  94 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    |||||||||| |||||   ||| ||||||| |||| |||||||||| | | | |||||| ||||||||||||| ||||||||||    
T  34413330 ttttaggtcaattttttatctagaatcacccctctgcatctttttttcccctttctttcaatctaaataagtgattttcacata 34413247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 35484595 - 35484548
Alignment:
Q  129 acatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    ||||||||||| | ||| |||||| |||||||||||||||||||||||    
T  35484595 acatctttttttcccttttctttcaatctaaataagtggttttcacat 35484548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 230
Target Start/End: Original strand, 48749997 - 48750176
Alignment:
Q  47 cttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 146  Q
    |||||| ||||  |||||| ||| |||| |||| |||||||||| | | ||||||||  ||||| |||| ||||||  || | |||||||||||| |||     
T  48749997 cttctctctaagttttcttcctctttcactcatcgaggaggggt-gatattaggtcaaattttgacctagaatcactcct-tgcatcttttttcccctt- 48750093  T
Q  147 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgtt 230  Q
    |||||| ||||||||||||| |||||||||| || | | |||| |||| ||||||||  ||||| | || | ||||||||||||    
T  48750094 tctttcaatctaaataagtgattttcacatacatcaag-tttttctttcgtgatttcgctgtcttagtgcgacgttgtgttgtt 48750176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 13145032 - 13144947
Alignment:
Q  112 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||| ||||| | |||||||| ||||| || ||| |||||| |||||||||||||||||||| |||||| |   |||||||||||||    
T  13145032 cctagaatcatccctctacatatttttacccctt-tctttcaatctaaataagtggttttcatatatatcaactttttccttttgtg 13144947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 34528569 - 34528650
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcaca 175  Q
    |||||||| ||||||||||| |||| ||||||| |||| ||||||||| ||   | |||||| ||||||||||||| ||| ||||    
T  34528569 tggttttatgtcattttttgacctagaatcacccctctgcatctttttccc---tttctttcgatctaaataagtgatttccaca 34528650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 16161640 - 16161767
Alignment:
Q  48 ttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 147  Q
    ||||| ||||| |||||| ||| ||||  ||| ||||||||||   |||||||||| |||||| |||| ||||||| |||| ||| |||||||  ||| |    
T  16161640 ttctctctaaattttcttcctctttcacacatcgaggaggggtaa-ttttaggtcaatttttgacctagaatcacctctcttcatattttttctcctt-t 16161737  T
Q  148 ctttccatctaaataagtggttttcacata 177  Q
     |||| ||||||||||||| ||| ||||||    
T  16161738 atttcaatctaaataagtgatttccacata 16161767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 27580356 - 27580263
Alignment:
Q  105 tttttggcctaaaatcaccactctacatcttttttcct-cttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
    |||||| |||| ||||| | |||||||||||||||  | | | || ||| ||||| ||||||||||||||||||||| | | ||||||||||||    
T  27580356 tttttgacctagaatcatccctctacatcttttttttttcctttcattcaatctatataagtggttttcacatatatcaagtttttccttttgt 27580263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 8e-45; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 24 - 227
Target Start/End: Original strand, 7036008 - 7036210
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| |  |||||||| |||||||||||||||| |||| ||||  ||| ||||| ||||||||||||||||||| |||||||||||     
T  7036008 ttttctagtgagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggt-ggttttaggtcattttttgacctaaaatcact 7036106  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttg 223  Q
      |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |   |||| ||||||||||||| | |||| |||| ||||| |    
T  7036107 catctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaatttttttcttttgtgatttcgtcgtctgattgcggcgtgg 7036206  T
Q  224 tgtt 227  Q
    ||||    
T  7036207 tgtt 7036210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 6012426 - 6012273
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| |||||||||||||||| |||  ||||||||||||||| ||||||||||||||||||| | || ||||||| ||||||||||||||| | |    
T  6012426 caacttctctctaaactttctttctccttcgttcattgaggaggggt-ggttttaggtcattttttgacatagaatcacccctctacatctttttttccc 6012328  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| ||||||||||||| ||||||| | ||| | | |||||||||||||    
T  6012327 ttttctttcaatctaaataagtgtttttcacgtctatcaagtttttccttttgtg 6012273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 13007029 - 13007182
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| |||||||||||||||| |||  |||| |||||| ||| ||||||||||||||||||| |||| ||||||| ||||||| |||||||||      
T  13007029 caacttctctctaaactttctttctccttcgttcatcgaggagaggt-ggttttaggtcattttttgacctagaatcacccctctacaccttttttccca 13007127  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  13007128 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 13007182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 31392065 - 31391896
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||  ||  |||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  31392065 ttttctagtgagaaaaattctaacttctctctaaactttctttctccatcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 31391967  T
Q  124 actctacatcttttt-tcctcttatctttccatctaaataagtggttttcacatatataaggcttttcctt 193  Q
     |||||||||||||| ||| ||| ||  || ||||||||||||||||||||||| ||| | | ||||||||    
T  31391966 cctctacatctttttctccccttttcgatcaatctaaataagtggttttcacatttatcaagtttttcctt 31391896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 38597578 - 38597750
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| |||  |||| ||||||||| ||||||||||| |||||||| |||| |||||||    
T  38597578 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggg-tggttttaggttattttttgacctagaatcacc 38597676  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||| ||  |||||| || |||||||||| ||||||||| ||| | | |||||||||||||    
T  38597677 cctctacatcttttttcc-ctattctttcaatttaaataagtgattttcacatctatcaagtttttccttttgtg 38597750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 26825209 - 26825384
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttgg--cctaaaatca 121  Q
    |||||||||| || ||| | ||| ||||| |||||||||||||||| |||  |||| |||||||||| ||||||||||| |||||| |  |||| |||||    
T  26825209 ttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggt-ggttttaggtcttttttttggacctagaatca 26825307  T
Q  122 ccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||| | ||| | | |||||||||||||    
T  26825308 ccactctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtg 26825384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 198
Target Start/End: Complemental strand, 9114012 - 9113860
Alignment:
Q  45 aacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 144  Q
    |||||||| |||||||||||||||| |||  |||| |||||||||| | ||||||||||||||||  |||| ||||||| |||||||||||||||||  |    
T  9114012 aacttctctctaaactttctttctctttcgttcatcgaggaggggt-gattttaggtcattttttaacctagaatcacccctctacatcttttttcccat 9113914  T
Q  145 tatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    | |||||  ||||||||||||||||||||||| ||| | | |||||||||||||    
T  9113913 tttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtg 9113860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 26878380 - 26878235
Alignment:
Q  30 agtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactcta 129  Q
    ||||||| ||| ||||||||||| |||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||||| |  ||| ||||||| |||||    
T  26878380 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggt-ggttttatgtcattttt-gatctagaatcacctctcta 26878283  T
Q  130 catcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    ||||||||| || ||| |||||| ||||||||||||||||||||||||    
T  26878282 catctttttcccccttttctttcaatctaaataagtggttttcacata 26878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 48 - 198
Target Start/End: Original strand, 34945226 - 34945375
Alignment:
Q  48 ttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 147  Q
    ||||| |||||||||||||||| |||  |||| || || || | ||||||||||||||||||| |||| |||||||  |||||||||||||||| ||| |    
T  34945226 ttctctctaaactttctttctccttcgttcatcgaagaaggat-ggttttaggtcattttttgacctagaatcacccttctacatcttttttcccctttt 34945324  T
Q  148 ctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  34945325 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 34945375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 230
Target Start/End: Original strand, 13421724 - 13421927
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| |||||||||||  ||||||||||||||  |||| |||| ||| | |  | | ||||||||||||||||| | || |||||||    
T  13421724 ttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcattcat-gagtatgaat-gattttaggtcattttttgacatagaatcacc 13421821  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttg 223  Q
     |||||||||||||| || ||| |||||  ||||||||||||||||||| ||||||||| | ||||| |||||||||||  | |||||| ||||  ||||    
T  13421822 -ctctacatctttttcccccttttcttttaatctaaataagtggttttcccatatataaagtttttctttttgtgattttttcgtctaagtgtgatgttg 13421920  T
Q  224 tgttgtt 230  Q
    |||||||    
T  13421921 tgttgtt 13421927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 38007140 - 38007291
Alignment:
Q  26 ttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccac 125  Q
    ||||||||||| ||| |  | |||||| |||||||||||||||| |||  |||| |||||||||| ||||||||||||||||||| |||  ||||||| |    
T  38007140 ttctagtgagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctcgaatcacccc 38007238  T
Q  126 tctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||||||  | ||| |||||| || ||||||||||||||||||| ||||    
T  38007239 tctacatcttttt--cccttttctttcaatttaaataagtggttttcacacatat 38007291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 6216696 - 6216852
Alignment:
Q  45 aacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 144  Q
    |||||||| ||||||||| ||||||||||  |||| ||||| |||| |||||||||||||| |||| |||||||||| |  ||||||| | |||||| ||    
T  6216696 aacttctctctaaactttatttctcattcgttcatcgaggatgggt-ggttttaggtcattctttgacctaaaatcatccatctacatttgttttcccct 6216794  T
Q  145 ----tatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
        | |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  6216795 ttgctttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg 6216852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 8096790 - 8096633
Alignment:
Q  38 aaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttt 137  Q
    ||||| ||||||||| ||||||||| |||||  |||  | ||||||||||  ||||||||||||||||||| | |||| ||||||| |||||  ||||||    
T  8096790 aaattccaacttctctctaaactttttttcttcttcgtttattgaggagga-ttggttttaggtcattttt-gacctagaatcacccctctatttctttt 8096693  T
Q  138 ttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||| ||| |||||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  8096692 ttcc-cttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtg 8096633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 2979584 - 2979469
Alignment:
Q  60 tttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 159  Q
    |||||| ||| |||| |||| |||||||||| | |||||||||| |||||| |||| ||||||| |||| |||||||||||||||| |||||| ||||||    
T  2979584 tttcttcctctttcactcatcgaggaggggt-gattttaggtcaatttttgacctataatcacccctctgcatcttttttcctctt-tctttcaatctaa 2979487  T
Q  160 ataagtggttttcacata 177  Q
    ||||||| ||||||||||    
T  2979486 ataagtgattttcacata 2979469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 25979938 - 25980111
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||  ||| | ||||||||| |||||||||||||||| |||  |||| ||||| |||| ||||| ||||||||||||| |||  ||| |||    
T  25979938 ttttctagtgagcgaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggt-ggtttcaggtcattttttgacctggaattacc 25980036  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
      |||||||||||||||| |||   |||| | |||||||||||||||| |||| |||   | |||||||||||||    
T  25980037 cttctacatcttttttcccctttgttttcaacctaaataagtggttttaacatctatcgagtttttccttttgtg 25980111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 197
Target Start/End: Complemental strand, 11074188 - 11074036
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    |||||| || ||||||||||||||||  ||  |||| |||||| || ||||||||||| |||||| | |||| ||||| |||||||| |||||||| | |    
T  11074188 caacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggttattttt-gacctagaatcatcactctacgtctttttttccc 11074090  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
    || |||||  |||||||||||||| |||||||| ||| | | ||||||||||||    
T  11074089 ttttcttttaatctaaataagtggctttcacatctatcaagtttttccttttgt 11074036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 11977245 - 11977072
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 122  Q
    ||||||||||||| ||| |  |||||||| |||||||||||||||| |||  |||| ||| |||||| |||||||| |  ||||||   |||| |||||     
T  11977245 ttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggt-ggttttagatttttttttttacctagaatcaa 11977147  T
Q  123 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
      ||| ||||||||||||| ||| |||||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  11977146 acctcgacatcttttttcc-cttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtg 11977072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 15571266 - 15571443
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 122  Q
    ||||||||||||| ||| |  |||||||| | || ||||||||||| |||| |||| ||||||   | ||||||| |||||||||| | |||| |||||     
T  15571266 ttttctagtgagagaaactctaacttctctccaagctttctttctccttcattcatcgaggagaaat-ggttttatgtcatttttttgacctagaatcat 15571364  T
Q  123 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 202  Q
    |  || |||||||||||| || | |||||| ||||||||||||||||||||||||||| | | |||||||||||| ||||    
T  15571365 ccatcaacatcttttttc-tcatttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtaattt 15571443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 10722619 - 10722705
Alignment:
Q  91 tggttttaggtcattttttgg-cctaaaatcaccac-tctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    ||||||||||||||||||| | |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  10722619 tggttttaggtcatttttttgacctagaatcaccccctctacatcttttttcctctt-tctttcaatctaaataagtgtttttcacat 10722705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 177
Target Start/End: Original strand, 39567112 - 39567227
Alignment:
Q  60 tttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 159  Q
    |||||| ||| |||| |||| |||||||||| | |||||||||| |||||| |||| ||||||  |||| ||||||||| || ||| |||||| ||||||    
T  39567112 tttcttcctctttcactcatcgaggaggggt-gattttaggtcaatttttgacctagaatcacgcctctgcatctttttccccctt-tctttcaatctaa 39567209  T
Q  160 ataagtggttttcacata 177  Q
    ||||||| ||||||||||    
T  39567210 ataagtgattttcacata 39567227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 11867529 - 11867587
Alignment:
Q  93 gttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttc 152  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||    
T  11867529 gttttaggtcattttt-gacctaaaatcaccactctacatcttttttcatcttttctttc 11867587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 230
Target Start/End: Complemental strand, 14082655 - 14082467
Alignment:
Q  48 ttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccac-tctacatcttttttcctctta 146  Q
    ||||| ||||||||||||| || |||  |||| ||||||  || ||||||| ||||||||||| | |  ||||||| | ||||||| ||||||   |||     
T  14082655 ttctctctaaactttctttatccttcgctcatcgaggagaagt-ggttttatgtcattttttgactttgaatcaccccctctacatattttttttccttt 14082557  T
Q  147 tctttccatctaaataagtggttttcacatatataaggcttttcct------tttgtgatttcattgtctaattgtggcgttgtgttgtt 230  Q
    | |||| |||||||||||||| |||||||||||| | | ||||| |      ||||||||||||| |||||| |||||||||||||||||    
T  14082556 tatttcaatctaaataagtggctttcacatatatcaagtttttcttatattttttgtgatttcatcgtctaagtgtggcgttgtgttgtt 14082467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 14211037 - 14211162
Alignment:
Q  47 cttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 146  Q
    |||||| ||||  |||||| ||| |||| |||| ||||||||  || |||||||||| |||||| |||| ||||||| |||| ||||||||| ||| |      
T  14211037 cttctctctaagttttcttcctctttcactcatcgaggaggg--tgattttaggtcaatttttgacctagaatcacccctctgcatctttttcccttt-- 14211132  T
Q  147 tctttccatctaaataagtggttttcacata 177  Q
     ||||| ||||||||||||| ||||||||||    
T  14211133 -ctttcaatctaaataagtgattttcacata 14211162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 24230095 - 24229942
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaa-ctttctttctcattcagtcattgaggaggggttggttttaggtc-attttttgg-cctaaaatc 120  Q
    ||||||||||||| ||| | ||||||||| ||||| |||||||| |  |||  |||| |||||| ||  ||||||||||  ||||||||  |||||||||    
T  24230095 ttttctagtgagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtgga-ggttttaggtttattttttgtacctaaaatc 24229997  T
Q  121 accactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    ||| |||||||| ||||| ||| || |||||| ||||||||||||| |||||||||    
T  24229996 acccctctacatatttttccctttt-tctttcaatctaaataagtgattttcacat 24229942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 7929974 - 7930130
Alignment:
Q  19 tctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaa 118  Q
    |||| ||||||||||||| ||| | ||| ||||| |||||||||||||||| |||| |||   |||||||| || |||||||||| |||||| |||| ||    
T  7929974 tctagttttctagtgagagaaactccaaattctctctaaactttctttctccttca-tca---aggagggg-tgattttaggtcaatttttgacctagaa 7930068  T
Q  119 tcaccactctacatc-ttttttc-ctcttatctttccatctaaataagtggttttcacatatat 180  Q
    ||||| || | |||| |||| || ||||| |||||  ||||||  |||||||||||||||||||    
T  7930069 tcacccctgtgcatcattttctctctcttttcttttaatctaa--aagtggttttcacatatat 7930130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 8088477 - 8088366
Alignment:
Q  66 tctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagt 165  Q
    |||| |||| |||||||| |||||| | |||||| ||||| |||| ||| || ||||| |||| ||||||||||| |||| |||||| ||||||||||||    
T  8088477 tctctttcactcattgagaaggggt-gattttagatcattctttgacctgaagtcacctctctgcatcttttttc-tctt-tctttcgatctaaataagt 8088381  T
Q  166 ggttttcacatatat 180  Q
    | |||||||| ||||    
T  8088380 gattttcacaaatat 8088366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 41630287 - 41630454
Alignment:
Q  20 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaat 119  Q
    ||||||||  ||||||| ||| ||||||||||| |||| |||||||||||||    |||| || || ||  ||||||||||||| |||||| |||| |||    
T  41630287 ctaatttttcagtgagagaaacttcaacttctctctaagctttctttctcat----tcatcgaagatgg--tggttttaggtca-tttttgacctagaat 41630379  T
Q  120 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
    || | ||||||||||||||  | | | |||||| |||||||||||  |||||||||| ||||| | ||||| ||||||    
T  41630380 ca-ctctctacatcttttt--cccatttctttcaatctaaataagccgttttcacatctataaagtttttctttttgt 41630454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 4771030 - 4771075
Alignment:
Q  134 ttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    ||||||||| || |||||| |||||||||||||||||||||||||||    
T  4771030 ttttttcctttt-tctttcaatctaaataagtggttttcacatatat 4771075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 19103689 - 19103630
Alignment:
Q  117 aatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    ||||||| |||  |||||||||||| ||| |||||| ||||||||||||| ||||||||||    
T  19103689 aatcacccctcagcatcttttttcccctt-tctttcgatctaaataagtgattttcacata 19103630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 28541120 - 28541069
Alignment:
Q  125 ctctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    |||| |||||||||||| ||| |||||| ||||||||||||| ||||||||||    
T  28541120 ctctgcatcttttttcccctt-tctttcaatctaaataagtgattttcacata 28541069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 42978391 - 42978565
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| |  |||||||| |||||||||||||||| |||  |||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  42978391 ttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 42978489  T
Q  124 actctacatcttttt-tcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||||||||||||||| ||| ||| ||  || ||||||||||||||||||||||||||||| | |||||||||||||    
T  42978490 actctacatctttttctccccttttcgatcaatctaaataagtggttttcacatatataaagtttttccttttgtg 42978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 37837766 - 37837594
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||| ||||| ||| | ||||||||| ||||||||| |||||| |||  ||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  37837766 ttttctaatgagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggt-ggttttaggtcattttttgacctagaatcacc 37837668  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||| | | |||| ||||||||    
T  37837667 cctctacatcttttttcc-cttttctttcaatctaaataagtggtttacacatatattaagttttttcttttgtg 37837594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 30757127 - 30756954
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| ||||| || ||| ||||||||||| ||||| |||||||||| |||  |||| |||||||||| |||||||||| |||||||| |||| |||||||    
T  30757127 ttttttagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggt-ggttttaggtaattttttgacctagaatcacc 30757029  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||| ||| | | |||||||||||||    
T  30757028 cctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcatgtttttccttttgtg 30756954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 19405062 - 19404892
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| | ||||||||| |||||  ||||||||| || | |||||||| |||||| ||||||||||||||||||| |||| |||||||    
T  19405062 ttttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggt-ggttttaggtcattttttgacctagaatcacc 19404964  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttg 196  Q
     ||||||||||||||| | ||| |||||| |||||||||||||||||||||||| || | | |||||||||||    
T  19404963 cctctacatctttttttc-cttttctttcaatctaaataagtggttttcacataaatcaagtttttccttttg 19404892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 9450449 - 9450294
Alignment:
Q  20 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaat 119  Q
    ||||||||||||||||| ||| | ||||||||   ||||||||||||||| |||  |||| |||||||| | ||||||||||||||||||| |||| |||    
T  9450449 ctaattttctagtgagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggat-ggttttaggtcattttttgacctagaat 9450351  T
Q  120 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    ||||  |||||||||| ||||| ||| |||||| ||||||||||||| |||||||||    
T  9450350 cacccatctacatcttgtttccccttttctttcaatctaaataagtgattttcacat 9450294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 47590097 - 47590267
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||||| ||||||||| ||||| ||||||||||||||  |||| |||||||||| | ||||||||||||||| |  ||| |||||||    
T  47590097 ttttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggt-gattttaggtcattttt-gaactagaatcacc 47590194  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     |||||||| ||||| ||| ||  ||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  47590195 cctctacatttttttccctatt--ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg 47590267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 34899892 - 34899742
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| |||||||||||||||| |||  |||  || |||    |||||||||||||||||||| |||| ||||||| ||||||||||||||| | |    
T  34899892 caacttctctctaaactttctttctccttcgttcaccgatgag----tggttttaggtcattttttgacctagaatcacccctctacatctttttttccc 34899797  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  34899796 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 34899742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 12141596 - 12141442
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttttt-cct 142  Q
    ||||||||| |||||||||||||||| |||  |||| || ||||||| ||||||||||||||||||| | || ||||||| ||||||||||||||| |||    
T  12141596 caacttctctctaaactttctttctccttcgttcatcgaagaggggt-ggttttaggtcattttttgacatagaatcacccctctacatcttttttccct 12141498  T
Q  143 cttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     || | |||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  12141497 tttttatttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 12141442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 39171900 - 39171726
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | |||| | || |||||||||||||||  |||  |||| |||||||||| |||| |||||||||||||| |||| |||||||    
T  39171900 ttttctagtgagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggt-ggttgtaggtcattttttgacctagaatcacc 39171802  T
Q  124 actctacatctt--ttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     |||||||||||  ||||||| || |||||| |||||||||||||||||||| || ||| | | |||||||||||||    
T  39171801 cctctacatcttttttttcct-ttttctttcgatctaaataagtggttttcatatctatcaagtttttccttttgtg 39171726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 40992965 - 40993138
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | ||||||||| |||||||||  ||||  |||  |||| ||||| ||  | |||||||||||||||||| |||||||||||     
T  40992965 ttttctagtgggagaaactccaacttctctctaaactttagttcttcttcgttcatcgaggatgg--tagttttaggtcattttttgacctaaaatcact 40993062  T
Q  124 actctacatctttttt-cctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||| || ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  40993063 cctctacatctttttttccacttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 40993138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 8013773 - 8013627
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| ||||||||||| |||||||||||||||  ||   |||| |||||||||| |||||||| |||||||||| |||| |||||||    
T  8013773 ttttttagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggt-ggttttagatcattttttgacctagaatcacc 8013675  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggtttt 171  Q
     ||||||||||||||| | ||| ||||||  |||||||||||| ||||    
T  8013674 cctctacatctttttttcccttttctttcagtctaaataagtgatttt 8013627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 230
Target Start/End: Original strand, 24770058 - 24770243
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| ||||||||||||||||||||  |||| |||  ||||| | |||||||||||||| || | || ||||| |  ||||||||||||||  ||    
T  24770058 caacttctctctaaactttctttctcattcgttcatcgagacggggt-gattttaggtcattttatgacttagaatcatccatctacatcttttttt-tc 24770155  T
Q  144 ttatctttccatctaaataagtggttttcacatatat-aaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgtt 230  Q
    || |||||| ||||||||||||||||||||||||||| ||   |||| ||||||||||||| | |||||| || || |||||||||||    
T  24770156 ttttctttcaatctaaataagtggttttcacatatatcaaatttttttcttttgtgatttcgtcgtctaagtgcggtgttgtgttgtt 24770243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 13797239 - 13797067
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| |||||||||||  |||| |||||||||| |||  |||| ||||| || | ||||||||||||||||||  |||| |||||||    
T  13797239 ttttctagtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggat-ggttttaggtcattttttaacctagaatcacc 13797141  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     |||||||||| |||||| ||| |||||| || |||||||||| |||| |||| ||| | | |||||||||||||    
T  13797140 cctctacatct-ttttccccttttctttcaatttaaataagtgattttaacatctatcaagtttttccttttgtg 13797067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 48061225 - 48061379
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| ||||||||||||| || |||  |||| |||||| ||| ||||||||||||||||||| | || ||||||| | |||||| |||||||| |    
T  48061225 caacttctctctaaactttctttatccttcgttcatcgaggagaggt-ggttttaggtcattttttgacttagaatcaccccactacatattttttcccc 48061323  T
Q  144 ttat-ctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || | ||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  48061324 tttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 48061379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 176
Target Start/End: Complemental strand, 48317099 - 48316969
Alignment:
Q  45 aacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 144  Q
    |||||||| ||||| || ||||||| |||  ||||  ||||||||| ||||||||||||||||| | |||| ||||||| |||||||||||||| || ||    
T  48317099 aacttctctctaaatttgctttctccttcgttcatcaaggaggggt-ggttttaggtcatttttggacctagaatcacccctctacatctttttccccct 48317001  T
Q  145 tatctttccatctaaataagtggttttcacat 176  Q
    | |||||| || ||||||||||||||||||||    
T  48317000 tttctttcaatttaaataagtggttttcacat 48316969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 230
Target Start/End: Original strand, 35132757 - 35132937
Alignment:
Q  47 cttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 146  Q
    |||||| ||||  |||||| ||| |||| |||| |||||||||| | |||||||||| |||||| |||| ||||||| ||||||||||||||||| |||     
T  35132757 cttctctctaagttttcttcctctttcactcatcgaggaggggt-gattttaggtcaatttttgacctagaatcacccctctacatcttttttcccctt- 35132854  T
Q  147 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgtt 230  Q
    |||||  ||||||||||||| |||||||||| || | | |||| |||| |||||||| | |||| | || | ||||||||||||    
T  35132855 tcttttaatctaaataagtgattttcacatacatcaag-tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgtt 35132937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 45350048 - 45349938
Alignment:
Q  87 gggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggct 186  Q
    |||||||||||||||||||||||| |||| |||||||  ||||| ||||||||||| || |||||| || |||||||||||||||||| ||||  ||| |    
T  45350048 gggttggttttaggtcattttttgacctagaatcacccatctacttcttttttcct-ttttctttcaatttaaataagtggttttcacgtataccaggtt 45349950  T
Q  187 tttccttttgtg 198  Q
    ||| ||||||||    
T  45349949 ttttcttttgtg 45349938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 19296713 - 19296797
Alignment:
Q  76 tcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaat 161  Q
    |||| |||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||| ||||||||    
T  19296713 tcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaat 19296797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 177
Target Start/End: Original strand, 22742757 - 22742872
Alignment:
Q  60 tttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 159  Q
    |||||| ||| |||| |||| |||||||||| | |||||||||| |||||   ||| ||||||| |||| |||||||||||| ||| |||||| ||||||    
T  22742757 tttcttcctctttcattcatcgaggaggggt-gattttaggtcaatttttaatctagaatcacccctctgcatcttttttcccctt-tctttcaatctaa 22742854  T
Q  160 ataagtggttttcacata 177  Q
    ||||||| ||||||||||    
T  22742855 ataagtgattttcacata 22742872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 5792667 - 5792735
Alignment:
Q  112 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||||| ||||||||||||||| ||||| ||||||  |||||| || ||||||||||||||||    
T  5792667 cctaaaatcacccctctacatctttttttctcttttctttcattctaaaaaaatggttttcacatatat 5792735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 1749426 - 1749248
Alignment:
Q  47 cttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 146  Q
    |||||| ||||  |||||| ||| |||| |||| |||||||||| | |||||||||| |||||| |||| ||||||| | || |||||||||||| |||     
T  1749426 cttctctctaagttttcttcctctttcactcatcgaggaggggt-gattttaggtcaatttttgacctagaatcacc-cgcttcatcttttttcc-ctt- 1749331  T
Q  147 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgtt 230  Q
    |||||| ||||||||||||| |||||||||| || | | |||| |||| |||||||| | |||| | || | ||||||||||||    
T  1749330 tctttcaatctaaataagtgattttcacatacatcaag-tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgtt 1749248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 5078707 - 5078548
Alignment:
Q  18 ttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaa 117  Q
    |||| ||||| |||||||| ||| ||||||||||| ||||  | ||||| || |||| ||||| |||| |||| | ||||||||||||||||| |||| |    
T  5078707 ttcttattttttagtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggt-gattttaggtcattttttgacctaga 5078609  T
Q  118 atcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||| |||| ||||||| |  |||   | |||| ||||||||||||| |||| ||||||||    
T  5078608 atcacccctctgcatctttct--ctccattatttcgatctaaataagtgatttttacatatat 5078548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 173
Target Start/End: Original strand, 38798575 - 38798717
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||||||||   | ||||||||  || |||||||||||||||||  |||| ||||    | ||||||||||||||| |||| | || |||||||    
T  38798575 ttttctagtgagaaac--tccaacttctgtctgaactttctttctcattcgttcatcgagg----gatggttttaggtcattctttgacatagaatcacc 38798668  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttca 173  Q
      ||||||||| ||||||| || |||||| || |||||||||||||||||    
T  38798669 catctacatctcttttcct-ttttctttcaatttaaataagtggttttca 38798717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 45350500 - 45350434
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggt 90  Q
    ||||||||||||| ||| ||||||||||| ||||||||| |||||| |||  |||| ||||||||||    
T  45350500 ttttctagtgagagaaacttcaacttctctctaaactttttttctccttcgttcatagaggaggggt 45350434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 48930657 - 48930714
Alignment:
Q  119 tcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    ||||| ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||||    
T  48930657 tcacccctctacatcttttttcccctt-tctttcaatctaaataagtgattttcacata 48930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 4529862 - 4530017
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| |||| |||||| ||||   ||||||||| |||| ||||  | ||| ||| | ||||||||||||||||| | || || || |    
T  4529862 ttttctagtgagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggt-gattttaggtcattttttgacatagaaccatc 4529960  T
Q  124 actctacatctttttt-cctcttatctttccatctaaataagtggttttcacatatat 180  Q
     | ||||||||||||| |||||| |||||| |||||| |||||  |||||||||||||    
T  4529961 ccgctacatcttttttccctctt-tctttcaatctaagtaagtatttttcacatatat 4530017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 24351099 - 24351000
Alignment:
Q  76 tcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcaca 175  Q
    |||| |||||||||| | |||||||||| |||||| |||| ||||||| || | |||| ||||| | ||| |||||| ||||||||||||| ||||||||    
T  24351099 tcatcgaggaggggt-gattttaggtcaatttttgacctagaatcacccctgtgcatccttttttccctt-tctttcaatctaaataagtgattttcaca 24351002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 25255087 - 25255174
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||||||||||||| |||| ||||||| || | |||| ||||||| ||| |||||| || ||||||||| ||||||||| ||||    
T  25255087 tggttttaggtcattttttgacctataatcacccctttgcatc-tttttcccctt-tctttcaatttaaataagttgttttcacacatat 25255174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 39329105 - 39328946
Alignment:
Q  20 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttgg-cctaaaa 118  Q
    ||||||||||||||||| ||| |  ||||| |  |||||||||||||||| ||   |||| ||||||| || ||||| ||||| ||||||   |||| ||    
T  39329105 ctaattttctagtgagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggttt-aggtctttttttttacctagaa 39329007  T
Q  119 tcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    | |||  ||| |||||||||||| ||| |||||| || ||||||||||||||||||| ||||    
T  39329006 ttacccatctgcatcttttttcc-cttttctttcaatttaaataagtggttttcacacatat 39328946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 12170277 - 12170450
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||| ||| |||||||||||| |||  |||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  12170277 ttttctagtgagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 12170375  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | | ||||| |||||||    
T  12170376 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttcgttttgtg 12170450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 33053476 - 33053303
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| |||  |||| |||||||||| ||||||||||||||||||| |||| ||||| |    
T  33053476 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcatc 33053378  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  33053377 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 33053303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 605977 - 606159
Alignment:
Q  15 aatttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcct 114  Q
    ||||| || |||||||||| || ||| | |||||| || |||||||||||||||| |||  |||| |||||||||| | ||||| ||||||||||| |||    
T  605977 aatttatagttttctagtgggagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggt-gattttatgtcattttttgacct 606075  T
Q  115 aaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |  |||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| |   |||||||||||||    
T  606076 aggatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaaatttttccttttgtg 606159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 3913881 - 3913709
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||   |||| ||||||||  |||||||||||||||||||| |||| |||||||    
T  3913881 ttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggg--tggttttaggtcattttttgacctagaatcacc 3913784  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     |||  ||||||||||||  || |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  3913783 cctccgcatcttttttcccattctctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 3913709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 45 - 197
Target Start/End: Original strand, 23128421 - 23128572
Alignment:
Q  45 aacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 144  Q
    |||||||| |||||||||||||||| |||  ||||||||||||| | | ||||||||||||||||| |||| ||||||| |||||||||||||| ||  |    
T  23128421 aacttctctctaaactttctttctccttcgttcattgaggagggatag-ttttaggtcattttttgacctagaatcacccctctacatctttttccccat 23128519  T
Q  145 tatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
    | ||||||  |||||||||||||||||||||| ||| | | ||||||||||||    
T  23128520 tttctttcattctaaataagtggttttcacatctatcaagtttttccttttgt 23128572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 30894414 - 30894573
Alignment:
Q  18 ttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaa 117  Q
    ||||| ||||||| ||||| ||| ||||||||||| ||||||||| |||||| |||  | || |||||||||| |||||||| |||||||||| |||| |    
T  30894414 ttctagttttcta-tgagagaaacttcaacttctctctaaacttt-tttctccttcgttaatcgaggaggggt-ggttttagatcattttttgacctaga 30894510  T
Q  118 atcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||| |||||||||| |||| | ||| |||||| |||||||||| ||||||||||||||||    
T  30894511 atcacccctctacatctgtttttcccttttctttcaatctaaataactggttttcacatatat 30894573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 34018372 - 34018515
Alignment:
Q  54 ctaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttcc 153  Q
    |||||||||||||||| |||  |||| ||||| ||   ||||||||||||||||||| |||| ||||||| |||||||||| ||| ||  || ||||||     
T  34018372 ctaaactttctttctccttcgttcatcgaggatggaa-ggttttaggtcattttttgacctagaatcacccctctacatctctttacccattttctttca 34018470  T
Q  154 atctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||||||||||||||||||||| | | |||| ||||||||    
T  34018471 atttaaataagtggttttcacatatatcaagttttttcttttgtg 34018515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 68288 - 68136
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccac-tctacatcttttttcct 142  Q
    ||||||||| |||||||||||||||| |||  |||| |||||||| | |||||||||| |||||| | |||| ||||||| | ||||||||||||| ||     
T  68288 caacttctctctaaactttctttctccttcgttcatcgaggagggat-ggttttaggtaattttt-gacctagaatcaccccctctacatctttttccc- 68192  T
Q  143 cttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||| |||||  ||||||||||||||||||||||| ||| | | |||||||||||||    
T  68191 cttttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtg 68136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 127463 - 127625
Alignment:
Q  28 ctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactc 127  Q
    ||||||||| ||||  ||||||||| |||||| || |||||| |||  |||||||||||||  |||||||||||   ||||||  ||||||||||| |||    
T  127463 ctagtgagagaaatcccaacttctctctaaacgttttttctctttcgttcattgaggaggg--tggttttaggta--tttttgatctaaaatcacccctc 127558  T
Q  128 tacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||||||||||| ||  || |||||||   |||||||||||||||||||||||| | | |||||||||||||    
T  127559 tacatctttttcccattt-tctttcc---taaataagtggttttcacatatatcaagtttttccttttgtg 127625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 176
Target Start/End: Original strand, 32059688 - 32059840
Alignment:
Q  21 taattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatc 120  Q
    |||||||||||||||| ||||| ||| |||||  ||||| ||||||||| |||| |||| |||||  || |||||||| |||||| |||| |||| ||||    
T  32059688 taattttctagtgagagaaattccaagttctctttaaacattctttctctttcattcatcgaggatagg-tggttttaagtcattgtttgacctagaatc 32059786  T
Q  121 accactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    | |  |||||||||||||  | ||| |||||| |||||||||||| ||||||||||    
T  32059787 atccttctacatcttttt--cccttttctttcaatctaaataagtagttttcacat 32059840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 29320150 - 29320037
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    |||||||||  ||||||||||||||| |||  |||| ||||| |||| ||||||||||||| |||||  ||| ||||||| ||||||||||||||||| |    
T  29320150 caacttctctttaaactttctttctccttcgttcatcgaggatgggt-ggttttaggtcatattttgatctagaatcacccctctacatcttttttcccc 29320052  T
Q  144 ttatctttccatcta 158  Q
    || |||||| |||||    
T  29320051 ttttctttcaatcta 29320037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 29255754 - 29255603
Alignment:
Q  20 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaat 119  Q
    |||| |||||||||||| ||||| ||||||||| | ||||| |||||||| |||  |||| || |||  || ||||||| |||||| ||||  |||||||    
T  29255754 ctaactttctagtgagagaaattccaacttctctccaaactctctttctccttcgttcatcgaagagatgt-ggttttatgtcattctttgatctaaaat 29255656  T
Q  120 caccactctacatcttttttcctcttatctttccatctaaataagtggttttc 172  Q
    ||    ||||||||||||| || ||| |||||| |||||||||||||||||||    
T  29255655 cattcatctacatctttttcccccttttctttcaatctaaataagtggttttc 29255603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 7515490 - 7515358
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttgg-cctaaaatcaccactctacatcttttttcct 142  Q
    ||||||||| |||||||| ||||||| |||  |||| |||||||||| |||||||| | ||||||| | |||| ||||||| |||||||| || || ||     
T  7515490 caacttctctctaaacttgctttctctttcgttcatcgaggaggggt-ggttttagattatttttttgacctagaatcacccctctacattttgttcccc 7515392  T
Q  143 cttatctttccatctaaataagtggttttcacat 176  Q
     || |||| | |||||||||||||||||||||||    
T  7515391 tttttcttccaatctaaataagtggttttcacat 7515358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 32327422 - 32327352
Alignment:
Q  128 tacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||||||||||| ||| |||||| || |||||||||||||||||||| ||| | | |||||||||||||    
T  32327422 tacatcttttttccccttttctttcaatataaataagtggttttcacatctatcaagtttttccttttgtg 32327352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 30608754 - 30608667
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||||||||||| | |||| ||||||| |||||||| |||||  | ||| |||||| |||||||| ||||||||||||||||||    
T  30608754 tggttttaggtcattttt-gacctagaatcacccctctacatatttttctc-cttttctttcaatctaaattagtggttttcacatatat 30608667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 32192004 - 32191885
Alignment:
Q  60 tttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 159  Q
    |||||||||| |||| ||||  ||||||||| ||||||||||| |||||||  ||| |||||||  ||| ||||||||| || ||| | |||| ||||||    
T  32192004 tttctttctctttcattcatcaaggaggggt-ggttttaggtccttttttgatctacaatcacccttctgcatctttttcccccttttatttcgatctaa 32191906  T
Q  160 ataagtggttttcacatatat 180  Q
    ||||||| |||  ||||||||    
T  32191905 ataagtgatttctacatatat 32191885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 32328891 - 32328793
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| |  |||||||| ||| |||||||||||| |||  |||| ||||||||| |||||||| |||| |||||| |||| |||||||    
T  32328891 ttttctagtgagagaaactctaacttctctctatactttctttctccttcgttcatcgaggagggg-tggttttaagtcagtttttgacctataatcacc 32328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 9721821 - 9721773
Alignment:
Q  21 taattttctagtgagaaaaatttcaacttctcactaaactttctttctc 69  Q
    |||||||||||||||| ||| | ||||||||| ||||||||||||||||    
T  9721821 taattttctagtgagagaaactccaacttctctctaaactttctttctc 9721773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 11321668 - 11321604
Alignment:
Q  134 ttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||| || || |||||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  11321668 tttttttctattttctttcaatctaaataagtggttttcacatatattaagttttttcttttgtg 11321604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 34222653 - 34222731
Alignment:
Q  100 gtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    ||||||||||  |||| ||||||| ||||||||| ||||||| ||| |||||| |||||||||||||||||  ||||||||    
T  34222653 gtcattttttaacctagaatcacccctctacatc-tttttcccctt-tctttcgatctaaataagtggtttcaacatatat 34222731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 9723687 - 9723602
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcat-tgaggaggggttggttttaggtcatttttt 109  Q
    ||||||||||| | ||| | ||||||||| |||||||||||||||| |||  ||||  ||||||||| |||||||||||| ||||||    
T  9723687 ttttctagtgaaagaaactccaacttctctctaaactttctttctcgttcgttcatcagaggagggg-tggttttaggtcttttttt 9723602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 177
Target Start/End: Original strand, 545843 - 545957
Alignment:
Q  60 tttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 159  Q
    |||||| ||| |||| |||| |||||||||| | ||||||| ||||||| | |||| ||||||   |||||||||||||||| ||| |||||| ||||||    
T  545843 tttcttcctctttcactcatcgaggaggggt-gattttaggccattttt-gacctagaatcactcttctacatcttttttcccctt-tctttcaatctaa 545939  T
Q  160 ataagtggttttcacata 177  Q
    |||||   ||||||||||    
T  545940 ataagcaattttcacata 545957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 31852474 - 31852370
Alignment:
Q  32 tgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctaca 131  Q
    ||||| ||| || ||||||||  ||| || ||||||||||| | ||||  ||||||||| |||||||||| ||| ||| |||||||||||||  ||| ||    
T  31852474 tgagataaactttaacttctctttaagctctctttctcatttactcatcaaggaggggt-ggttttaggttattgtttagcctaaaatcacccatctgca 31852376  T
Q  132 tctttt 137  Q
    ||||||    
T  31852375 tctttt 31852370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 1523259 - 1523339
Alignment:
Q  94 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    |||||||||| |||||| |||| ||||||| |||| ||| |||||  ||||| |||||| ||||||||||||| ||| ||||||    
T  1523259 ttttaggtcaatttttgacctagaatcacc-ctctgcattttttt--ctcttttctttcaatctaaataagtgatttccacata 1523339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 24227954 - 24227864
Alignment:
Q  91 tggttttaggtcattttttgg--cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||||||||||||    | |||||||| | |||||||||||||  || ||| |||||| |  ||||||||||||||||||||||||    
T  24227954 tggttttaggtcatttttttttacataaaatcagccctctacatcttttcccccctt-tctttcaacttaaataagtggttttcacatatat 24227864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 8e-42; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 2520578 - 2520751
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| |||  |||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  2520578 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 2520676  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||| ||| || ||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  2520677 cctctacatcttttttccccttttcgttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 2520751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 21686548 - 21686376
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| || |||||||| |||||||||||||||| ||   |||| |||||||||| ||||| ||||| ||||||| ||||||||||||    
T  21686548 ttttctagtgagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggt-ggtttgaggtc-ttttttgacctaaaatcacc 21686451  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  21686450 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 21686376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 234
Target Start/End: Original strand, 54021662 - 54021879
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| ||||| ||||| |||||||||||||||  |||| |||| ||||  | || ||||||||||||||||||| | |||||||| |    
T  54021662 ttttttagtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagt-ggttttaggtcattttttgacataaaatcatc 54021760  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcc--------ttttgtgatttcattgtctaattg 215  Q
     ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||   | ||||||        |||||||||||| |||||||||||    
T  54021761 cctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatccagtttttccttttgtgtttttgtgatttcgttgtctaattg 54021860  T
Q  216 tggcgttgtgttgttagtc 234  Q
     ||| ||||||||||||||    
T  54021861 cggcattgtgttgttagtc 54021879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 5119139 - 5119313
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 122  Q
    ||||||||||||| ||||||||||||||  ||||||||| |||||| |||| ||||  ||||||||| ||||||| ||||||||||   |||| ||||||    
T  5119139 ttttctagtgagataaatttcaacttctttctaaactttatttctccttcattcatcaaggaggggt-ggttttatgtcattttttttacctagaatcac 5119237  T
Q  123 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    | |||||||||||||| || ||  |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  5119238 ccctctacatctttttccccctcttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg 5119313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 26633978 - 26633806
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| | ||||||||| |||||||||||||||  |||  ||||||||||||||| ||| ||||||||||||||| |||| |||||||    
T  26633978 ttttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggt-ggtcttaggtcattttttgacctagaatcacc 26633880  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     || ||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  26633879 cctatacatcttttt-cctcttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 26633806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 19853819 - 19853669
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | ||||||||| |||||||||||||| | |||| |||| |||||||||| ||||||||||||||||| | |||| |||||||    
T  19853819 ttttctagtgggagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggt-ggttttaggtcattttt-gacctagaatcacc 19853722  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
     ||||||||||||||||| ||| |||| | |||||||||||||||||||||||    
T  19853721 cctctacatcttttttccccttttcttccaatctaaataagtggttttcacat 19853669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 198
Target Start/End: Complemental strand, 22558749 - 22558599
Alignment:
Q  48 ttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc-tta 146  Q
    ||||| |||||||||||||||| |||  ||||||||||||||| ||||||||||||||||||| | || ||||||| ||||||||||||||||| | ||     
T  22558749 ttctctctaaactttctttctccttcgttcattgaggaggggt-ggttttaggtcattttttgacatagaatcacctctctacatcttttttcccctttt 22558651  T
Q  147 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  22558650 tctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 22558599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 4143042 - 4142890
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    |||||||||  ||||||||||||||| ||   |||| |||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||| |    
T  4143042 caacttctctataaactttctttctcctttgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacccctctacatcttttttcccc 4142944  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| |||||||||||| |||||||||| ||| | | |||||||||||||    
T  4142943 ttttctttcaatctaaataagt-gttttcacatctatcaagtttttccttttgtg 4142890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 22611005 - 22611157
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| |||||||||||||||| |||  || | |||||||||| ||||||||||||||||| | |||| |||||||  |||||||||||||||| |    
T  22611005 caacttctctctaaactttctttctccttcgttcgtcgaggaggggt-ggttttaggtcattttt-gacctagaatcacccatctacatcttttttcccc 22611102  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| ||||||||||||||||||||||| ||| | | || ||||||||||    
T  22611103 ttttctttcaatctaaataagtggttttcacatctatcaagtttatccttttgtg 22611157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 53810829 - 53811002
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | || |||||| |||||||||||| ||| |||  |||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  53810829 ttttctagtgggagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctataatcacc 53810927  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     |||||||||||||| || ||| |||||| || |||||||||| ||||||||| ||| | | | |||||||||||    
T  53810928 cctctacatctttttcccccttttctttcaatttaaataagtgattttcacatctatcaagttattccttttgtg 53811002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 9165351 - 9165196
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcat-tttttggcctaaaatcac 122  Q
    |||||| |||||| ||| | ||||||||| ||||||||||||| ||  ||| |||| |||||| ||| ||||||||||||| |||||  |||| ||||||    
T  9165351 ttttcttgtgagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggt-ggttttaggtcatattttttacctagaatcac 9165253  T
Q  123 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatata 179  Q
    | ||||||||||||||  | |||||||||| ||||||||||||||||||||||||||    
T  9165252 ccctctacatctttttctcccttatctttcaatctaaataagtggttttcacatata 9165196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 35348107 - 35348261
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||| | ||| | |||||||||  |||||||| |||||| |||  |||| | |||||||| | ||||||||||||||||| |||| |||||||    
T  35348107 ttttctagtgaaagaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggt-gattttaggtcattttttgacctagaatcacc 35348205  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
     ||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||    
T  35348206 tctctacatcttttttcc-cttttctttcaatctaaataagtggttttcacaaatat 35348261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 45418330 - 45418500
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||| |||||||| ||||||||||| |||||  || |||||| | || |||| ||||||    |||||||||||||||||||| |||| ||||| |    
T  45418330 ttttctagcgagaaaaacttcaacttctctctaaaaattttttctcctccattcatcgaggag----tggttttaggtcattttttgacctagaatcatc 45418425  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||| || |||||||||| ||| || || |||||||| ||||||||||||||| | | |||||||||||||    
T  45418426 cctctacacctcttttcctcttttctctcaatataaataagaggttttcacatatatcaagtttttccttttgtg 45418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 9178158 - 9178312
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||| |||||| ||| ||||  ||||| ||||| |||||||||| |||| ||||  ||||||||| ||| ||||||||||||||| |||| |||||||    
T  9178158 ttttctggtgagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggt-ggtcttaggtcattttttgacctagaatcacc 9178256  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatata 179  Q
      |||||||||||||  | ||| |||||| |||||||||| |||||||||||||||    
T  9178257 cttctacatctttttctcccttttctttcaatctaaataaatggttttcacatata 9178312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 32766374 - 32766485
Alignment:
Q  84 gaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataag 183  Q
    |||||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||| |||||| |||||| ||||||||| ||| |     
T  32766374 gagggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaagtaagtgtttttcacatctatcaa 32766473  T
Q  184 gcttttcctttt 195  Q
    | ||||||||||    
T  32766474 gtttttcctttt 32766485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 26091222 - 26091050
Alignment:
Q  23 attttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcac 122  Q
    ||||| |||||||| ||| | ||||||||| |||||| ||||||||| |||| |||| ||||| | || | |||||||| |||||||| |||| ||||||    
T  26091222 attttttagtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagt-gattttaggttattttttgacctagaatcac 26091124  T
Q  123 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
    | ||||| ||||||||||  ||| | |||| |||||||||||||||||||||||| || | | ||||||||||||    
T  26091123 ccctcta-atcttttttctccttttatttcaatctaaataagtggttttcacataaatcaagtttttccttttgt 26091050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 13633915 - 13634089
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| |||  |||| |||||| || ||||||||||||| |||||| | || |||||||    
T  13633915 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtgg-tggttttaggtca-tttttgacatagaatcacc 13634012  T
Q  124 actctacatctttt--ttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     |||||||||||||    || ||| |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  13634013 cctctacatcttttccccccccttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 13634089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 10496143 - 10496316
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||  |||||||||||| ||| |||  |||| ||||||| || |||||||||||| |||||| |||| |||||||    
T  10496143 ttttctagtgagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgt-ggttttaggtcaatttttgacctagaatcacc 10496241  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 202  Q
     || ||||||||||||||  || |||||  ||||||||||||||||||||||   || | | |||||||||||||||||    
T  10496242 -ctatacatcttttttcccattttcttttaatctaaataagtggttttcaca---atcaagtttttccttttgtgattt 10496316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 43510018 - 43510169
Alignment:
Q  42 ttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcc 141  Q
    |||||||||||  ||||||||| ||||| |||  |||| || || |||| ||||||||||||||||||| |||| ||||||  ||||||||||||||| |    
T  43510018 ttcaacttctctttaaactttcattctccttcgttcatcgaagaagggt-ggttttaggtcattttttgacctagaatcactcctctacatctttttttc 43510116  T
Q  142 tcttatctttccatctaaataagtggttttcacatatataaggcttttccttt 194  Q
     ||| |||||| |||||||||||||| |||||||| ||| | | |||||||||    
T  43510117 ccttttctttcaatctaaataagtggctttcacatttatcaagtttttccttt 43510169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 24099379 - 24099227
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 122  Q
    ||||||||||| | ||| || || ||||| |||||||||||||||  | |  |||| |||||| ||| |||||||||||||||||| | |||| |||||     
T  24099379 ttttctagtgaaagaaactttaaattctctctaaactttctttcttctacgttcatcgaggagaggt-ggttttaggtcatttttttgacctagaatcat 24099281  T
Q  123 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    | ||||||||||||||||| ||| |||||| ||||||||||||| |||||||||    
T  24099280 ccctctacatcttttttccccttttctttcaatctaaataagtgattttcacat 24099227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 48257757 - 48257647
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||||||| | |||||||||  |||||||||||||||||||   ||| ||||||||| |||||||| ||||||||||| |||| |||||||    
T  48257757 ttttctagtgagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggagggg-tggttttatgtcattttttgacctagaatcacc 48257659  T
Q  124 actctacatctt 135  Q
      ||||||||||    
T  48257658 catctacatctt 48257647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 47320709 - 47320537
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| |||||||||||  |||  |||| ||||| |||  |||| ||| |||||| |||||||||||||| |||| | |||||||||     
T  47320709 ttttttagtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggt-ggttttaggtcattctttgacttaaaatcaca 47320611  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||||| |||||||||||| ||| || ||| ||||||||||||| |||||||| |||| | || ||| ||||||||    
T  47320610 actctgcatcttttttcccctt-tcgttcgatctaaataagtgattttcacaaatatcaagcgttttcttttgtg 47320537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 10259136 - 10259048
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||||||||||| | |||||||||||| ||||||||| ||||| ||||| |||||| ||||||| || ||||||||||||||||    
T  10259136 tggttttaggtcattttt-gacctaaaatcacccctctacatcgttttttctcttttctttcgatctaaacaaatggttttcacatatat 10259048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 180
Target Start/End: Original strand, 22300666 - 22300800
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| ||||| ||| |||||| |||| || | ||||||| || ||||||||||||||||||| |||||||||||| || | |||| ||||| |||    
T  22300666 caacttctctctaaattttatttctctttcactcgtcgaggaggagt-ggttttaggtcattttttgacctaaaatcacccctttgcatccttttt-ctc 22300763  T
Q  144 ttatctttccatctaaataagtggttttcacatatat 180  Q
    || |||||| || |||||||||| ||||||| |||||    
T  22300764 ttttctttcaatttaaataagtgattttcacgtatat 22300800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 43095471 - 43095586
Alignment:
Q  60 tttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttt--ttcctcttatctttccatct 157  Q
    |||||||||| |||| || ||||||| |||| | |||||||||||||||      ||||||||| |||||||||||||  |||||||| |||||| ||||    
T  43095471 tttctttctccttcattcgttgaggaagggtag-ttttaggtcattttt------aaaatcacccctctacatcttttttttcctcttttctttcaatct 43095563  T
Q  158 aaataagtggttttcacatatat 180  Q
    |||||||||||||||||||||||    
T  43095564 aaataagtggttttcacatatat 43095586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 56040888 - 56040801
Alignment:
Q  91 tggttttaggtcattttttgg-cctaaaatcaccactctacatcttttttcctcttat-ctttccatctaaataagtggttttcacat 176  Q
    ||||||||||||||||||| | |||| ||||||| ||||||||||||||||| ||| | ||||| |||||||||||||||||||||||    
T  56040888 tggttttaggtcatttttttgacctagaatcacccctctacatcttttttccccttcttctttcaatctaaataagtggttttcacat 56040801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 53443932 - 53444070
Alignment:
Q  29 tagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 128  Q
    |||||||| ||| ||||||||||| ||||||||| |||||| |||  |||||||||| | ||||||||||||||| |||||| |||| || |||| ||||    
T  53443932 tagtgagataaacttcaacttctctctaaactttttttctctttcgttcattgagga-gcgttggttttaggtca-tttttgacctagaaacacccctct 53444029  T
Q  129 acatcttttttcctcttatctttccatctaaataagtggttt 170  Q
    |||| ||||||  |||| | |||| || ||||||||||||||    
T  53444030 acat-tttttttgtcttttatttcaatttaaataagtggttt 53444070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 33920853 - 33921025
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtca-ttttttggcctaaaatcac 122  Q
    |||| |||||||| ||| |||||||| || |||||||||||||||  |||| |||| ||| | ||| ||||||||||||| ||||||  || |||| |||    
T  33920853 ttttttagtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatggg-tggttttaggtcatttttttaacccaaaagcac 33920951  T
Q  123 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |  |||||||||||||| | ||| |||||| |  |||||||||| ||||||||||||| | | |||| ||||||||    
T  33920952 ccatctacatctttttttcccttttctttcaa--taaataagtgattttcacatatatcaagttttttcttttgtg 33921025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 40066262 - 40066190
Alignment:
Q  126 tctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||| | | | |||||||||||||    
T  40066262 tctacatcttttttcctcttttctttcaatataaataagtggttttcacatattttaagtttttccttttgtg 40066190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 27651745 - 27651900
Alignment:
Q  20 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaat 119  Q
    |||||||| |||||||| |||||    |||||| ||||| |||||| ||| |||| |||| |||||||||| | | |||||||| |||||| ||||  ||    
T  27651745 ctaattttttagtgagagaaattctgtcttctctctaaattttcttcctctttcactcatcgaggaggggt-gatgttaggtcaatttttgacctaggat 27651843  T
Q  120 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    ||||  ||| ||||||||||||  || |||||| ||||||||||||| ||||||||||    
T  27651844 cacccatctgcatcttttttcccatt-tctttcaatctaaataagtgattttcacata 27651900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 51888488 - 51888370
Alignment:
Q  60 tttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 159  Q
    |||||||||| |||| |||| |||||||||| ||||||||||||||||||| | |  ||||||| ||||  ||||||| ||| ||| |||| | ||||||    
T  51888488 tttctttctctttcactcatcgaggaggggt-ggttttaggtcattttttgacattgaatcacccctctcaatcttttatcccctt-tcttccgatctaa 51888391  T
Q  160 ataagtggttttcacatatat 180  Q
    | ||||| |||||||||||||    
T  51888390 acaagtgattttcacatatat 51888370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 21231678 - 21231604
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtg 166  Q
    ||||||||||||||||||||  ||||||||||| |||| |||||||||| ||||| ||||||  ||||||||||||    
T  21231678 tggttttaggtcattttttgatctaaaatcacctctctccatctttttttctctt-tctttcattctaaataagtg 21231604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 21225417 - 21225344
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagt 165  Q
    ||||||||||||||||||||  ||||||||||| |||| |||||||||||| ||| ||||||  |||||||||||    
T  21225417 tggttttaggtcattttttgatctaaaatcacctctctccatcttttttcccctt-tctttcattctaaataagt 21225344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 230
Target Start/End: Original strand, 36194511 - 36194717
Alignment:
Q  21 taattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatc 120  Q
    ||||||| |||||||| ||||||   |||||| ||||  |||||| ||| |||| | || ||||| |||| | |||||| ||| |||||| ||||||| |    
T  36194511 taattttttagtgagagaaattttgtcttctctctaagttttcttcctctttcacttatcgaggatgggt-gattttagatcaatttttgacctaaaaac 36194609  T
Q  121 accactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcg 220  Q
    | | |||| |||||||||| ||| | |||||| || |||||||||| |||||||||| || | | |||| |||| |||||||| |||||| | || | ||    
T  36194610 atccctctgcatctttttt-ctcctttctttcaatttaaataagtgattttcacatacatcaag-tttttctttcgtgatttcgttgtcttagtgcgacg 36194707  T
Q  221 ttgtgttgtt 230  Q
    ||||||||||    
T  36194708 ttgtgttgtt 36194717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 22039070 - 22038936
Alignment:
Q  60 tttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 159  Q
    |||||||||| |||| |||| ||| |||||| |||||||||||| |||| |  ||| ||||||| || | |||||||||||| ||| |||||| ||||||    
T  22039070 tttctttctctttcactcatcgagcaggggt-ggttttaggtcaattttggatctagaatcacc-ctttgcatcttttttcc-ctt-tctttctatctaa 22038975  T
Q  160 ataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||||||| ||||||||| ||| | | |||| ||||||||    
T  22038974 ataagtgattttcacatctatcaagttttttcttttgtg 22038936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 9713796 - 9713863
Alignment:
Q  112 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||| ||||||  ||||||||||||||||| ||| |||||| ||||||||||||| ||| |||||||||    
T  9713796 cctagaatcacttctctacatcttttttcccctt-tctttcaatctaaataagtgatttccacatatat 9713863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 22064019 - 22063948
Alignment:
Q  94 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtg 166  Q
    ||||||||||||||||| |||| ||||||| |||| ||| |||||| ||| | |||||| |||||||||||||    
T  22064019 ttttaggtcattttttgacctagaatcacccctctgcatatttttt-ctcctttctttcaatctaaataagtg 22063948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 9634580 - 9634630
Alignment:
Q  130 catcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||| ||| | |||||| ||||||||||||| |||||||||||||    
T  9634580 catctttttttctcatttctttcgatctaaataagtgattttcacatatat 9634630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 29121920 - 29121876
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatctt 135  Q
    |||||||||||||||||||| |||||||||||   ||||||||||    
T  29121920 tggttttaggtcattttttgacctaaaatcactcatctacatctt 29121876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 31013877 - 31013726
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| |||  |||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  31013877 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 31013779  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
     |||||||||||||| || ||| |||||| |||||||||||||||||||||||    
T  31013778 cctctacatctttttcccccttttctttcaatctaaataagtggttttcacat 31013726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 27110770 - 27110597
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| |||| |||| || || |||| |||||||||||||||||||  ||||||||||     
T  27110770 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggt-ggttttaggtcattttttgatctaaaatcaca 27110672  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
      |||||||||||||| ||||| |||||| ||||||||||||||| ||||||||||| | | |||||||||||||    
T  27110671 catctacatcttttttactcttttctttcaatctaaataagtggtcttcacatatatcaagtttttccttttgtg 27110597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 37971072 - 37971280
Alignment:
Q  18 ttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaa 117  Q
    ||||| ||||||| ||||| ||| | ||||||||| ||||| |||||||||  |||| |||| ||||||    |||||||||||||||||||| |||| |    
T  37971072 ttctagttttctaatgagagaaactccaacttctctctaaattttctttcttcttcattcatcgaggag----tggttttaggtcattttttgacctaga 37971167  T
Q  118 atcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtg 217  Q
    |||||| ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||| ||  | | | |||||||||||||||| | |||||| || |    
T  37971168 atcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctaccaagttgttccttttgtgatttcgtcgtctaagtgcg 37971267  T
Q  218 gcgttgtgttgtt 230  Q
    ||||| |||||||    
T  37971268 gcgttttgttgtt 37971280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 236
Target Start/End: Original strand, 28897502 - 28897712
Alignment:
Q  32 tgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctaca 131  Q
    ||||| ||| ||||||||||   |||||| || ||||  |||| || | |||||||||| ||||||| |||||||||||  ||||||||||| |||||||    
T  28897502 tgagagaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggt-ggttttaagtcattttttgatctaaaatcacccctctaca 28897600  T
Q  132 tcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcc--------ttttgtgatttcattgtctaattgtggcgttg 223  Q
    |||||||||||||| |||||| ||||||||||||||||||||  ||||| | | ||||||        |||||||||||| ||||||||||| | |||||    
T  28897601 tcttttttcctcttttctttcaatctaaataagtggttttcatgtatatcaag-ttttcctatgatgtttttgtgatttcgttgtctaattgcgacgttg 28897699  T
Q  224 tgttgttagtcat 236  Q
    |||||||||||||    
T  28897700 tgttgttagtcat 28897712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 10377480 - 10377623
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| |||  |||| ||||||||| |||||||||||||||||||| |||| || ||||    
T  10377480 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggg-tggttttaggtcattttttgacctagaa-cacc 10377577  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggtt 169  Q
    | ||||||||||||| || ||| |||||| ||||||||||||||||    
T  10377578 aatctacatctttttcccccttctctttcaatctaaataagtggtt 10377623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 14545143 - 14545036
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcacca-ctctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggctttt 189  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |   ||||    
T  14545143 tggttttaggtcattttttgacctaaaatcaccctctctacatctttttttctcttttctttcaatctaaataagtggttttcacatatatcaaaatttt 14545044  T
Q  190 ccttttgt 197  Q
    ||||||||    
T  14545043 ccttttgt 14545036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 23230447 - 23230600
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| |||||||||||||||| |||  |||| ||||| ||||  ||||||||||| |||||| || ||||||||| ||||||||||||||||| |    
T  23230447 caacttctctctaaactttctttctccttcgttcatcgaggatgggt--gttttaggtcaatttttgaccaaaaatcacccctctacatcttttttcccc 23230544  T
Q  144 -ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     || |||||| |||||||||||||||||||| || ||| | | |||| ||||||||    
T  23230545 tttttctttcaatctaaataagtggttttcatatctatcaagttttttcttttgtg 23230600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 8980980 - 8981121
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| | ||||||||| ||||  |||| |||||||||| || | |||||||||| ||||||||||||||||||| ||||||||||||    
T  8980980 ttttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggt-ggttttaggtcattttttgacctaaaatcacc 8981078  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtg 166  Q
     || | |||| ||||||| ||| |||||| |||||||||||||    
T  8981079 cctatgcatcctttttccccttttctttcaatctaaataagtg 8981121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 7883541 - 7883395
Alignment:
Q  29 tagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 128  Q
    |||||||| ||| ||||||||||  ||||| ||||||||||||||  |||| || || | || ||||||||||||||||| |  ||| ||||||| ||||    
T  7883541 tagtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagt-ggttttaggtcattttt-gatctataatcacccctct 7883444  T
Q  129 acatcttttttcc-tcttatctttccatctaaataagtggttttcacat 176  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  7883443 acatcttttttccctcttttctttcaatctaaataagtggttttcacat 7883395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 3673247 - 3673381
Alignment:
Q  42 ttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcc 141  Q
    ||||||||||| |||||||||||||||| || | |||| || ||||| ||||||||||||||||||| | |||| ||||| | |||||||||||||  ||    
T  3673247 ttcaacttctctctaaactttctttctcctttattcatcgaagaggg-ttggttttaggtcattttt-gacctagaatcatccctctacatcttttgccc 3673344  T
Q  142 tcttatctttccatctaaataagtggttttcacatata 179  Q
     ||| |||||| |||||||||||||||| |||||||||    
T  3673345 -cttttctttcaatctaaataagtggttatcacatata 3673381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 25191378 - 25191223
Alignment:
Q  18 ttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaa 117  Q
    ||||| |||| |||||||| ||| | ||||||||| |||||||||||||||| ||   |||| |||||| ||| | ||||||||||||||||| |||| |    
T  25191378 ttctagttttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggt-gattttaggtcattttttgacctaga 25191280  T
Q  118 atcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcaca 175  Q
    ||||||  |||||||||||||||| ||| |||||| |  |||||||||| ||||||||    
T  25191279 atcacccatctacatcttttttcc-cttttctttcaaattaaataagtgattttcaca 25191223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 40211612 - 40211460
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 122  Q
    ||||||||||||| ||| | ||| |||||  |||| |||||||||| |||  | || |||||||||| || ||||||| ||||||| | |||| ||||||    
T  40211612 ttttctagtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggt-ggctttaggtaatttttttgacctagaatcac 40211514  T
Q  123 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    | ||||||||||||||| ||||| |||||| ||||||||||| |||||||||||    
T  40211513 ccctctacatcttttttactcttttctttcaatctaaataagcggttttcacat 40211460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 198
Target Start/End: Complemental strand, 1239703 - 1239537
Alignment:
Q  30 agtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactcta 129  Q
    ||||||| ||| ||||||||||| ||||  |||| ||||| | |  |||| |||||||||| ||||||||||| || |||| |||||||||||| ||||     
T  1239703 agtgagagaaacttcaacttctctctaagttttccttctcttccgctcatcgaggaggggt-ggttttaggtccttctttgacctaaaatcacccctctg 1239605  T
Q  130 catcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||||||||| ||| || ||| ||||||||||||| |||||||| |||| |||  ||| ||||||||    
T  1239604 catcttttttcccctt-tcgttcgatctaaataagtgattttcacaaatatcaggtgttttcttttgtg 1239537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 17693919 - 17693805
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| | ||||||||| |||||||||||||||| |||  |||||||||||||||| ||||||||||| |||||| |||| ||||| |    
T  17693919 ttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtt-gttttaggtca-tttttgacctagaatcatc 17693822  T
Q  124 actctacatcttttttc 140  Q
     ||||||||||||||||    
T  17693821 cctctacatcttttttc 17693805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 45446117 - 45445963
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| |||  |||| ||||| ||| | |||||| ||||||||||| | || ||||| |    
T  45446117 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaaggg-tagttttatgtcattttttgacatagaatcatc 45446019  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
     ||||||||||||||||| ||| | |||| || ||| ||||||||||||||| ||||    
T  45446018 tctctacatcttttttcc-cttttatttcaatttaattaagtggttttcacacatat 45445963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 230
Target Start/End: Complemental strand, 7677562 - 7677375
Alignment:
Q  48 ttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 147  Q
    ||||| ||||| |||||||||  |||  ||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||  ||  || || |    
T  7677562 ttctctctaaattttctttcttcttcgttcattgaggaggggt-ggttttaggtcattttttgacctagaatcacccctctacatctcattcact-tttt 7677465  T
Q  148 ctttccatctaaataagtggttttcacatatataaggcttt-------tccttttgtgatttcattgtctaattgtggcgttgtgttgtt 230  Q
    ||||| |||||||||| | |||||||||||||| | | |||       |  |||||||||||||| ||||||||| ||||||||||||||    
T  7677464 ctttcgatctaaataaattgttttcacatatatcaagttttgtttttgtgtttttgtgatttcatcgtctaattgcggcgttgtgttgtt 7677375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 197
Target Start/End: Complemental strand, 20560030 - 20559880
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| ||||||||| |||||  |||  |||| || ||||||| |||||||| |||||||| | |||| ||||||| ||||||||  ||||||| |    
T  20560030 caacttctctctaaactttttttcttcttcgttcatcgatgaggggt-ggttttagatcatttttggacctagaatcacccctctacat--tttttcccc 20559934  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
    || |||||| ||||||||||||| ||||||||| ||| | | ||||||||||||    
T  20559933 ttttctttcaatctaaataagtgattttcacatctatcaagtttttccttttgt 20559880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 197
Target Start/End: Complemental strand, 20571592 - 20571442
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| ||||||||| |||||  |||  |||| || ||||||| |||||||| |||||||| | |||| ||||||| ||||||||  ||||||| |    
T  20571592 caacttctctctaaactttttttcttcttcgttcatcgatgaggggt-ggttttagatcatttttggacctagaatcacccctctacat--tttttcccc 20571496  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
    || |||||| ||||||||||||| ||||||||| ||| | | ||||||||||||    
T  20571495 ttttctttcaatctaaataagtgattttcacatctatcaagtttttccttttgt 20571442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 15344094 - 15344265
Alignment:
Q  29 tagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 128  Q
    |||||||| ||| | ||||||||| ||||  |||  ||||| |||| |||| |||||||||| |||||||||||||| |||| |||||||| ||| ||||    
T  15344094 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggt-ggttttaggtcattctttgacctaaaattacccctct 15344192  T
Q  129 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 202  Q
     |||||||||||| ||| | | |  ||||||||||||| |||||||| |||| | || ||| ||||||||||||    
T  15344193 gcatcttttttcccctt-tatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattt 15344265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 15433159 - 15433330
Alignment:
Q  29 tagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 128  Q
    |||||||| ||| | ||||||||| ||||  |||  ||||| |||| |||| |||||||||| |||||||||||||| |||| |||||||| ||| ||||    
T  15433159 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggt-ggttttaggtcattctttgacctaaaattacccctct 15433257  T
Q  129 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 202  Q
     |||||||||||| ||| | | |  ||||||||||||| |||||||| |||| | || ||| ||||||||||||    
T  15433258 gcatcttttttcccctt-tatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattt 15433330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 15524463 - 15524634
Alignment:
Q  29 tagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 128  Q
    |||||||| ||| | ||||||||| ||||  |||  ||||| |||| |||| |||||||||| |||||||||||||| |||| |||||||| ||| ||||    
T  15524463 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggt-ggttttaggtcattctttgacctaaaattacccctct 15524561  T
Q  129 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 202  Q
     |||||||||||| ||| | | |  ||||||||||||| |||||||| |||| | || ||| ||||||||||||    
T  15524562 gcatcttttttcccctt-tatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattt 15524634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 29937929 - 29938052
Alignment:
Q  55 taaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttcca 154  Q
    ||||||||||||||  |||  |||||||||| |||| |||||||| |||||||| | |||| ||||||| ||||||||||||||||  ||| |||||| |    
T  29937929 taaactttctttctacttcgttcattgaggatgggt-ggttttagatcattttt-gacctagaatcacccctctacatcttttttcgccttttctttcaa 29938026  T
Q  155 tctaaataagtggttttcacatatat 180  Q
     |||||||||||||||||| ||||||    
T  29938027 cctaaataagtggttttcatatatat 29938052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 20553531 - 20553379
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    |||||||||  |||||||| |||||  |||  |||| |||||||||| |||||||| |||||||| | |||| ||||||| | | |||| |||||||| |    
T  20553531 caacttctctttaaactttttttcttcttcgttcatcgaggaggggt-ggttttagatcatttttggacctagaatcaccccacaacattttttttcc-c 20553434  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| ||||||||||||| ||||||||| ||| | | |||||||||||||    
T  20553433 ttttctttcaatctaaataagtgattttcacatctatgaagtttttccttttgtg 20553379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 1236999 - 1236883
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| ||||||||||| ||||  |||| ||||| |||  ||||||||||||||| |||||||||||||| |||| |||||||| | |    
T  1236999 ttttttagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggt-ggttttaggtcattctttgacctaaaataatc 1236901  T
Q  124 actctacatcttttttcc 141  Q
     |||| ||||||||||||    
T  1236900 cctctgcatcttttttcc 1236883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 8412655 - 8412571
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcatttttt 109  Q
    ||||||||||||| ||| |  |||||||| ||||||||||||||||||||  |||| ||| ||||| |||||||||||||||||||    
T  8412655 ttttctagtgagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtagggg-tggttttaggtcatttttt 8412571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 177
Target Start/End: Complemental strand, 24099567 - 24099417
Alignment:
Q  23 attttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcac 122  Q
    ||||| |||||||| ||| ||||||||||| |||   |||||||||| |||| |||| ||| ||||  ||| ||||||||| |||||| |||| ||||||    
T  24099567 attttttagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtaggg--tggctttaggtca-tttttgacctagaatcac 24099471  T
Q  123 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    | |||| ||| || ||||||||| |||||| || |||||||||| ||| ||||||    
T  24099470 ccctctgcattttgtttcctctt-tctttcgatttaaataagtgatttccacata 24099417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 24186878 - 24186792
Alignment:
Q  112 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||||||||||| | ||||||||||||||| |||| |||||  ||||||||||||| |||||| |||||| | | |||| ||||||||    
T  24186878 cctaaaatcactattctacatcttttttcatcttttctttaaatctaaataagtgattttcatatatatcaagtttttgcttttgtg 24186792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 14585569 - 14585634
Alignment:
Q  112 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    |||| ||||||| |||| |||||||||| ||||| |||||| ||||||||||||| ||||||||||    
T  14585569 cctagaatcacccctctgcatctttttttctcttttctttcaatctaaataagtgattttcacata 14585634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 29617763 - 29617665
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||||||||||||||| ||||| ||| |||||| |||| | || || |||  ||| |||||||||||||||||| |||| |||||||    
T  29617763 ttttttagtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgtt-gttttaggtcattttttgacctacaatcacc 29617665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 40619307 - 40619206
Alignment:
Q  95 tttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttt 194  Q
    |||||||||||||| | |||| ||||| | |||||||| ||||||| |||| ||| || ||||||||||||| ||||||||||||| | | ||||| |||    
T  40619307 tttaggtcattttt-gacctagaatcatccctctacatattttttc-tcttttctatcaatctaaataagtgattttcacatatatcaagtttttctttt 40619210  T
Q  195 tgtg 198  Q
    ||||    
T  40619209 tgtg 40619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 18890942 - 18890861
Alignment:
Q  94 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    |||||||||| |||||| |||| ||||||   ||| |||||||||||| ||| |||||| ||||||||||||| |||||||||    
T  18890942 ttttaggtcaatttttgacctagaatcactcatctgcatcttttttcccctt-tctttcaatctaaataagtgattttcacat 18890861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 44091986 - 44091881
Alignment:
Q  91 tggttttaggtcattttttgg-cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggctttt 189  Q
    ||||||| ||||||||||| | |||| ||||||| ||||||||||||||||    | |||||| |||||||| |||||||||||||| ||| | | ||||    
T  44091986 tggttttgggtcatttttttgacctagaatcacc-ctctacatcttttttcta--tctctttcgatctaaattagtggttttcacatctatcaagttttt 44091890  T
Q  190 ccttttgtg 198  Q
    |||||||||    
T  44091889 ccttttgtg 44091881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 33214930 - 33214783
Alignment:
Q  31 gtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtc-attttttggcctaaaatcaccactcta 129  Q
    |||||| ||| ||||| ||||| |||||||||||||||| |||  |||| ||||| ||| ||||||||||||  ||||||| | || |||||    ||||    
T  33214930 gtgagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatggg-tggttttaggtcttttttttgacttagaatcattcatcta 33214832  T
Q  130 catcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||  | ||| |||||| || |||||||||| ||||| |||||||    
T  33214831 catcttttt--cccttttctttcaatttaaataagtgattttcgcatatat 33214783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 198
Target Start/End: Complemental strand, 36948738 - 36948571
Alignment:
Q  29 tagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 128  Q
    |||||||| ||| |||||||||||  ||||||||||||||| || | |||||   |||||| | |||||||||| ||||||   ||| ||||||| | ||    
T  36948738 tagtgagacaaacttcaacttctctttaaactttctttctcctttattcattatagagggggtagttttaggtcgtttttt-tactataatcacctc-ct 36948641  T
Q  129 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
      | | ||||||   || |||||| |||||||||||||||||||| |||||| |   |||||||||||||    
T  36948640 ctagcctttttctcattttctttcaatctaaataagtggttttcatatatatcaaatttttccttttgtg 36948571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 8443761 - 8443672
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttt--tttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||||||||||||  | || |||||||| ||| |||||||  ||||| ||| |||||| ||||||||||||| ||| |||||||||    
T  8443761 tggttttaggtcattttttaacttagaatcacca-tctgcatctttcttttcccctt-tctttcgatctaaataagtgatttccacatatat 8443672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 10232851 - 10233024
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| |||  ||||  ||||||||| ||||||||||||||||||| |||| |||||||    
T  10232851 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggt-ggttttaggtcattttttgacctagaatcacc 10232949  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||| | ||| | | |||||||||||||    
T  10232950 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtg 10233024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 21431406 - 21431578
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| |||  |||| |||||||||| ||||||||||||||||| | ||||||||||||    
T  21431406 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttt-gacctaaaatcacc 21431503  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     |||||||||||||||||  || |||||| ||||||||||||||||||||||| ||| | | ||||| |||||||    
T  21431504 cctctacatcttttttcccattttctttcaatctaaataagtggttttcacatctatcaagtttttctttttgtg 21431578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 47895932 - 47896105
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| |||  |||| |||||||||| |||| ||| |||||||||| |||| |||||||    
T  47895932 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttatagatcattttttgacctagaatcacc 47896030  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||   || |||||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  47896031 cctctacatcttttttctctttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtg 47896105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 35865241 - 35865087
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||| |||  || | |||||||||| ||||||||||||||||| |  ||||||||| |    
T  35865241 ttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggt-ggttttaggtcattttt-gatctaaaatcatc 35865144  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
      |||||||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  35865143 cttctacatcttttttcctcttttctttcaatctaaataagtagttttcacatatat 35865087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 54148787 - 54148941
Alignment:
Q  42 ttcaacttctcactaaactttctttctcattcagtcatt-gaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttc 140  Q
    ||||| ||||| |||||||||||||||| ||| |||| | |||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  54148787 ttcaatttctctctaaactttctttctccttc-gtcaatcgaggaggggt-ggttttaggtcattttttgacctacaatcacccctctacatcttttttc 54148884  T
Q  141 ctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
    ||||| |||||| ||||||||||||||||||||||| ||| | | |||| |||||||    
T  54148885 ctcttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgt 54148941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 174
Target Start/End: Original strand, 9998247 - 9998397
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 122  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| |||  |||| |||||||||| |||||||||||||||||| | |||| ||||||    
T  9998247 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcatttttttgacctagaatcac 9998345  T
Q  123 cactctacatcttttttcctcttatctttccatctaaataagtggttttcac 174  Q
    | ||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  9998346 ccctctacatcttttttccccttttctttcaatctaaataagtggttttcac 9998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 6954984 - 6954831
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| |||||||||||||||| |||  ||| ||||||||||| | ||||||||||||||||| |||| ||||||| ||||||||||||||||| |    
T  6954984 caacttctctctaaactttctttctccttcgttcactgaggaggggt-gattttaggtcattttttgacctagaatcacccctctacatcttttttcccc 6954886  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| |||||||||||||| |||||||| ||| | | ||||| |||||||    
T  6954885 ttttctttcaatctaaataagtgggtttcacatctatcaagtttttcattttgtg 6954831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 10229255 - 10229430
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttgg--cctaaaatca 121  Q
    |||||||||| || ||| | ||| ||||| |||||||||||||||| |||  |||| |||||||||| ||||||||||| |||||| |  |||| |||||    
T  10229255 ttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggt-ggttttaggtcttttttttggacctagaatca 10229353  T
Q  122 ccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||| | ||| | | |||||||||||||    
T  10229354 ccactctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtg 10229430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 10108019 - 10108190
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| ||   |||| |||||||||| ||||||||||||||||  | |||| |||||||    
T  10108019 ttttctagtgggagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggt-ggttttaggtcatttt--gacctagaatcacc 10108115  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||| | ||| | | |||||||||||||    
T  10108116 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtg 10108190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 48651043 - 48650869
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||| | ||| | ||||||||| ||||||||||||||||  ||  |||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  48651043 ttttctagtgaaagaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggt-ggttttaggtcattttttgacctaaaatcacc 48650945  T
Q  124 actctacatctt-ttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||| ||||||| |||||| ||| |||||| ||||  ||||||||||||||||| ||| | | |||||||||||||    
T  48650944 cctcgacatctttttttccccttttctttcaatctgtataagtggttttcacatctatcaagtttttccttttgtg 48650869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 40487102 - 40487254
Alignment:
Q  20 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaat 119  Q
    ||||||||||||||||| ||| | ||||||||| |||||||||||||||| |||  |||| ||||||||| || ||||||||||||||||| |||| |||    
T  40487102 ctaattttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggg-tgattttaggtcattttttgacctagaat 40487200  T
Q  120 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcac 174  Q
    |||   |||||||| ||||||| ||| |||||| |||||||||||||||||||||    
T  40487201 cactcttctacatc-tttttccccttttctttcaatctaaataagtggttttcac 40487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 234
Target Start/End: Complemental strand, 20609175 - 20608989
Alignment:
Q  54 ctaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttc-------ctctta 146  Q
    |||| ||||||||||| |||| || | |||||||||| | ||||| || |||||||| |||||||||| | |||||||||||||||        |||||     
T  20609175 ctaagctttctttctccttcattcgtcgaggaggggt-gattttaagttattttttgacctaaaatcaaccctctacatcttttttttttttttctcttt 20609077  T
Q  147 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgttagtc 234  Q
    |||||| |||||||||||||||||| |||||||| | | |||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  20609076 tctttcaatctaaataagtggttttaacatatatcaagtttttccttttgtgatttcgtcgtctaattgcggcgttgtgttgttagtc 20608989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 33579649 - 33579803
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||| || |||  |||| || || |||| ||||||| ||||||||||| |||| |||||||    
T  33579649 ttttctagtgagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggt-ggttttaagtcattttttgacctagaatcacc 33579747  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
     |||||||||||||||||  || |||||| ||||||||||||| |||||||||||||    
T  33579748 cctctacatcttttttcc-attttctttcaatctaaataagtgattttcacatatat 33579803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 45568752 - 45568601
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| |||  |||| |||||||||| |||||||||||||||||||  ||| ||| | |    
T  45568752 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgatctagaataatc 45568654  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
      |||||||||||||||| ||| |||||| |||||||||||| ||||||||||    
T  45568653 catctacatcttttttccccttttctttcaatctaaataagttgttttcacat 45568601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 47042364 - 47042205
Alignment:
Q  20 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaat 119  Q
    ||||||||||||||| | ||| | ||||||||| ||||||||| ||| || |||  |||| |||||||||| ||||||||||||||||||  |||| |||    
T  47042364 ctaattttctagtgaaagaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggt-ggttttaggtcattttttaacctataat 47042266  T
Q  120 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||| ||||||||||||||| | ||| |||||| || |||||||||| |||||||||||||    
T  47042265 cacccctctacatctttttttcccttttctttcaatttaaataagtgattttcacatatat 47042205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 36461739 - 36461566
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| ||||  ||||| |||||||||||||||| |||  |||| ||||| | || ||||||||||||||||||| |||| | |||||    
T  36461739 ttttctagtgtgagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagt-ggttttaggtcattttttgacctatattcacc 36461641  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||| ||| | | |||| ||||||||    
T  36461640 cctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcaagttttttcttttgtg 36461566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 40556492 - 40556665
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | ||||||||  ||||||||||||||||||||  |||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  40556492 ttttctagtgggagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 40556590  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||| ||||||||||| | ||| |||||  || ||||||||||||||||| || ||| | | ||| |||||||||    
T  40556591 cctccacatctttttttcccttttcttttgatataaataagtggttttcatatctatcaagttttcccttttgtg 40556665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 52923403 - 52923252
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| |||||||||||||||| |||  ||||||||||| ||| | ||||| ||||||||| | |||| ||||||| ||||||||||||||||| |    
T  52923403 caacttctctctaaactttctttctccttcgttcattgaggagaggtag-ttttaagtcattttt-gacctagaatcacccctctacatcttttttcc-c 52923307  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  52923306 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 52923252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 9797833 - 9797686
Alignment:
Q  26 ttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccac 125  Q
    ||||||||||| ||| | ||||||||| ||||||||| |||||| |||  |||||||| |||   |||||||||||||||||||| |||| ||||||| |    
T  9797833 ttctagtgagagaaactccaacttctctctaaactttatttctccttcgttcattgag-agg---tggttttaggtcattttttgacctagaatcacccc 9797738  T
Q  126 tctacatctt-ttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    |||||||||| |||| ||||| |||||| |||||||||||||||||||||||    
T  9797737 tctacatcttttttttctcttttctttcaatctaaataagtggttttcacat 9797686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 23800220 - 23800062
Alignment:
Q  24 ttttctagtgagaaaaatttcaactt-ctcactaaactttctttctcattcagtcattgaggaggggt-tggttttaggtcattttttggcctaaaatca 121  Q
    ||||||||||||| ||| ||||| || ||| ||||| ||| |||||| |||| |||| || ||||||  ||||||||||| |||||||| |||||||| |    
T  23800220 ttttctagtgagagaaacttcaaatttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttgacctaaaatta 23800121  T
Q  122 ccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |   |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  23800120 ctcttctacatcttttttcctcttttctttcaatctaaataagtggtttttacatatat 23800062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 7449209 - 7449063
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||| ||||| ||| | ||||||||| | ||||||| |||||| |||  ||||| ||||||| | ||||||||||||||||||| | || ||||  |    
T  7449209 ttttctaatgagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggct-ggttttaggtcattttttgacatagaatcgtc 7449112  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttc 172  Q
     ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  7449111 cctctacatcttttttcctcttttctttcaatctaaataagtggttttc 7449063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 7457351 - 7457205
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||| ||||| ||| | ||||||||| | ||||||| |||||| |||  ||||| ||||||| | ||||||||||||||||||| | || ||||  |    
T  7457351 ttttctaatgagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggct-ggttttaggtcattttttgacatagaatcgtc 7457254  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttc 172  Q
     ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  7457253 cctctacatcttttttcctcttttctttcaatctaaataagtggttttc 7457205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 29921856 - 29921988
Alignment:
Q  47 cttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 146  Q
    |||||| ||||  |||||||||| |||| || | |||||||||| | |||||||||||||||||  ||||||||||  |||| |||||||||||| |||     
T  29921856 cttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcacttctctccatcttttttcccctt- 29921954  T
Q  147 tctttccatctaaataagtggttttcacatatat 180  Q
    |||||| ||||||||||||| ||| |||||||||    
T  29921955 tctttcaatctaaataagtgatttccacatatat 29921988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 29971009 - 29971141
Alignment:
Q  47 cttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 146  Q
    |||||| ||||  |||||||||| |||| || | |||||||||| | |||||||||||||||||  ||||||||||  |||| |||||||||||| |||     
T  29971009 cttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcacttctctccatcttttttcccctt- 29971107  T
Q  147 tctttccatctaaataagtggttttcacatatat 180  Q
    |||||| ||||||||||||| ||| |||||||||    
T  29971108 tctttcaatctaaataagtgatttccacatatat 29971141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 38545616 - 38545712
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatca 121  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||| |||  ||||||||||| || |||||||||||||||||||| |||| |||||    
T  38545616 ttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtgg-tggttttaggtcattttttgacctagaatca 38545712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 43488905 - 43488747
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggt-------tggttttaggtcattttttggcctaa 116  Q
    |||| |||||||| ||| ||||||||||| |||||||||||||||| |||| |||| | || ||||        ||| |||||||| ||||||| ||||     
T  43488905 ttttttagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgggggggggagggggggtgggtttaggtc-ttttttgacctag 43488807  T
Q  117 aatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    ||||||| |||||||||||||||||  || |||||| |||||||||||||||||||||||    
T  43488806 aatcacccctctacatcttttttccctttttctttcaatctaaataagtggttttcacat 43488747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 167
Target Start/End: Original strand, 32701299 - 32701421
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    |||||||||  ||||||||||||||| |||  |||| |||| ||||| ||||||||||||||||||| |||| ||||| | |||||||||||| |||  |    
T  32701299 caacttctctttaaactttctttctccttcgttcatcgaggtggggt-ggttttaggtcattttttgacctagaatcatccctctacatctttcttctcc 32701397  T
Q  144 ttatctttccatctaaataagtgg 167  Q
    || |||||| ||||||||||||||    
T  32701398 ttttctttcaatctaaataagtgg 32701421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 21534092 - 21533966
Alignment:
Q  48 ttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttttt-cctctta 146  Q
    ||||| |||||||||||||||| |||  | || ||||| |||| |||||||||||  |||||| |||| ||||||| ||||||||||||||| ||||||     
T  21534092 ttctctctaaactttctttctccttcgttaatcgaggatgggt-ggttttaggtc--tttttgacctagaatcacccctctacatctttttttcctcttt 21533996  T
Q  147 tctttccatctaaataagtggttttcacat 176  Q
    |||| | |||||||||||||||||||||||    
T  21533995 tcttccaatctaaataagtggttttcacat 21533966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 50194591 - 50194437
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| | ||||||||| ||||  |||| ||||| |||| || | ||| ||| || |||||||| |||||||||| ||||||||||||    
T  50194591 ttttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagt-ggttttagatcattttttgacctaaaatcacc 50194493  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
     |||| |||| ||||||| ||| |||||| ||||||||||||| ||| |||||||||    
T  50194492 tctctgcatcctttttcc-cttctctttcaatctaaataagtgatttccacatatat 50194437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 31272119 - 31271942
Alignment:
Q  20 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaat 119  Q
    ||||||||||||||||| ||| | ||||||||| ||||  ||||||| || |||  |||| ||||||||  || |||||||| |||||||  |||| |||    
T  31272119 ctaattttctagtgagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacctagaat 31272020  T
Q  120 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || | || |||||||||| ||| ||| ||| || |||||||||| |||||||||||| ||| | | |||| ||||||||    
T  31272019 catccctttacatcttttgtcccctt-tctatcaatctaaataaatggttttcacatttatcaagttttttcttttgtg 31271942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 26276070 - 26275951
Alignment:
Q  55 taaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttcca 154  Q
    ||||||||||||||| || | ||||||||||| ||| |||||||||| |||||||| |||||||||| | ||| |||| ||||| ||  || |||||| |    
T  26276070 taaactttctttctcctttattcattgaggagaggt-ggttttaggtaattttttgacctaaaatcaaccctcgacat-tttttacccattttctttcaa 26275973  T
Q  155 tctaaataagtggttttcacat 176  Q
    | ||||||||||||||||||||    
T  26275972 tttaaataagtggttttcacat 26275951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 37040632 - 37040704
Alignment:
Q  105 tttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    |||||| |||| ||||||| |||||||||||||||||  || |||||| ||||||||||||||||||||||||    
T  37040632 tttttgacctagaatcacccctctacatcttttttcccattttctttcaatctaaataagtggttttcacata 37040704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 46220459 - 46220613
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||| | ||| |  |||||||| |||||||||||||||| || | | |||||||| ||| ||||||||||||||||||   | |||||| ||     
T  46220459 ttttctagtgatagaaactataacttctctctaaactttctttctcttttatttattgaggaaggggtggttttaggtcatttttaa-cataaaattact 46220557  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
     || |||||||||||||||||| | |||  || |||||||| |||||||||||||||    
T  46220558 cctttacatcttttttcctctttt-tttaaatataaataagcggttttcacatatat 46220613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 12150090 - 12149915
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| | | |||||||||||  |||||||||||||  ||    |||| |||||||||| ||||||| || |||||||| |||| |||||||    
T  12150090 ttttttagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggt-ggttttaagttattttttgacctataatcacc 12149992  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 202  Q
     ||||||| |||||||  |||| |||||  | |||||||||||||||| ||||||||   | |||| ||||||||||||    
T  12149991 cctctacacctttttt--tcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtgattt 12149915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 42460596 - 42460679
Alignment:
Q  94 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    |||||||||| |||||| |||||||||| || ||| |||||||||||| ||| |||||| ||||||||||||| ||| ||||||    
T  42460596 ttttaggtcagtttttgacctaaaatcatcaatctgcatcttttttccccttttctttcaatctaaataagtgatttccacata 42460679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 36910862 - 36910776
Alignment:
Q  112 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||| ||||||  ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | | |||||||| ||||    
T  36910862 cctagaatcactcctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttctgtg 36910776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 629214 - 629059
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| |  |||||||| ||||  |||| ||| | |||| |||| |||||||||| |||||||||||||| |||| |||||||||| |    
T  629214 ttttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggt-ggttttaggtcattctttgacctaaaatcatc 629116  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
      ||| ||||||||||   |   |||||| ||||||||||||| |||||||| ||||    
T  629115 cttctgcatcttttttttccccttctttcgatctaaataagtgattttcacaaatat 629059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 197
Target Start/End: Original strand, 43016636 - 43016808
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtca--ttttttggcctaaaatca 121  Q
    ||||||||||||| ||| |  |||||||| ||||| |||||||||| |||  |||| ||||| ||| |||||||||||||  | ||||| |||| |||||    
T  43016636 ttttctagtgagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaaggg-tggttttaggtcagttcttttgacctagaatca 43016734  T
Q  122 ccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 197  Q
    || ||| || |||||||||| ||| |||||| || || |||||| | |||||||||||| | | || |||||||||    
T  43016735 cccctccacgtcttttttcccctt-tctttcaatttatataagt-gatttcacatatattaagtttatccttttgt 43016808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 21290104 - 21289977
Alignment:
Q  47 cttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 146  Q
    |||||| ||||  |||||| ||| |||| |||| |||||| ||| | |||||||||| |||||| |||| ||||||| |||| |||||||||||| ||      
T  21290104 cttctctctaagttttcttcctctttcactcatggaggagaggt-gattttaggtcaatttttgacctagaatcacccctctgcatcttttttcccct-- 21290008  T
Q  147 tctttccatctaaataagtggttttcacata 177  Q
    |||||| ||| ||||||||| |||| |||||    
T  21290007 tctttcaatccaaataagtgattttaacata 21289977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 7546397 - 7546544
Alignment:
Q  30 agtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactcta 129  Q
    ||||||| |||||  | |||||| ||||  ||||||||||  ||| |||| |||||||||| | |||||||||| ||||||  ||| ||||||| ||||     
T  7546397 agtgagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggt-gattttaggtcaatttttgatctagaatcacccctctg 7546495  T
Q  130 catctttttt--cctcttatctttccatctaaataagtggttttcacata 177  Q
    ||||||||||  || | | |||||| ||||||||||||| ||||||||||    
T  7546496 catcttttttttccccct-tctttcaatctaaataagtgattttcacata 7546544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 29239185 - 29239273
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    ||||||||||||||||||||  ||| ||||||| | |||||||||||||  || | |||||  |||||||||| || |||||||||||||    
T  29239185 tggttttaggtcattttttgatctagaatcacccc-ctacatctttttttttcctttctttagatctaaataaatgattttcacatatat 29239273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 44804888 - 44804929
Alignment:
Q  98 aggtcattttttggcctaaaatcaccactctacatctttttt 139  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  44804888 aggtcattttttgacctaaaatcaccactctgcatctttttt 44804929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 53508069 - 53508156
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||| ||||||||||||| | ||||||||||||  ||| | ||||||||||| || |||||| || |||||||||| |||||||||||||    
T  53508069 tggtcttaggtcattttt-gacctaaaatcacccatctgcgtcttttttcctttt-tctttcaatataaataagtgattttcacatatat 53508156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 53099746 - 53099790
Alignment:
Q  192 ttttgtgatttcattgtctaattgtggcgttgtgttgttagtcat 236  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||    
T  53099746 ttttgtgatttcgtcgtctaattgtgacgttgtgttgttagtcat 53099790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 20988007 - 20987952
Alignment:
Q  125 ctctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    ||||||||||| ||||||||| |||||| || |||||||||| |||||| ||||||    
T  20988007 ctctacatcttctttcctcttttctttcaatttaaataagtgattttcaaatatat 20987952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 51923611 - 51923720
Alignment:
Q  125 ctctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgt 224  Q
    |||| |||||||||||| ||| |||||| ||||||||||||| |||||||||  || | | |||| |||| |||||||| | |||| | |||| ||||||    
T  51923611 ctctgcatcttttttcccctt-tctttcaatctaaataagtgattttcacatgcatcaag-tttttctttcgtgatttcgtcgtcttagtgtgacgttgt 51923708  T
Q  225 gttgttagtcat 236  Q
    |||||| |||||    
T  51923709 gttgttcgtcat 51923720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 1649309 - 1649355
Alignment:
Q  134 ttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    ||||||| || | |||||| |||||||||||||||||||||||||||    
T  1649309 ttttttcttcctttctttcaatctaaataagtggttttcacatatat 1649355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 29249098 - 29249178
Alignment:
Q  98 aggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||| |||||| |||| ||||||  |||| ||||||||| |||||| || ||| ||||||||||||| |||||||||||||    
T  29249098 aggtcactttttgacctagaatcacttctcttcatcttttt-cctctt-tcgttcgatctaaataagtgtttttcacatatat 29249178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 4821624 - 4821708
Alignment:
Q  60 tttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctt 145  Q
    |||||||||| |||| || | ||| |||||| ||||||||||||||||||| |||| ||||||  |||| ||||  ||||||||||    
T  4821624 tttctttctctttcattcgtcgagaaggggt-ggttttaggtcattttttgacctataatcactcctctgcatccattttcctctt 4821708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 9319937 - 9320010
Alignment:
Q  125 ctctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||||||||||||||| | | | | |||| ||| ||||||||||||||||||| ||| | | |||||||||||||    
T  9319937 ctctacatctttttttcccctttttttcaatcaaaataagtggttttcacatctatcaagtttttccttttgtg 9320010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 12050936 - 12050804
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| ||||| |||||||||| |||  ||||  |||| | || ||||||| || ||||||||   || ||||||| ||||||||||| ||||| |    
T  12050936 caacttctctctaaattttctttctccttcgttcatcaaggatgtgt-ggttttaagttattttttgatttagaatcacccctctacatcttctttcccc 12050838  T
Q  144 ttat-ctttccatctaaataagtggttttcacat 176  Q
    || | ||||  ||||| |||||||||||||||||    
T  12050837 tttttctttaaatctagataagtggttttcacat 12050804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 18010921 - 18010973
Alignment:
Q  147 tctttccatctaaataagtggttttcacatatat-aaggcttttccttttgtg 198  Q
    |||||| ||||||| ||||||||||||||||||| || | |||||||||||||    
T  18010921 tctttcgatctaaaaaagtggttttcacatatatcaaagtttttccttttgtg 18010973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 7646263 - 7646442
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| |||  |||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  7646263 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 7646361  T
Q  124 actctacatc-ttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttc 203  Q
     ||||||||| |||||||| ||| |||||| ||||||||||||||||||||||| ||  | | ||||||||||||| ||||    
T  7646362 cctctacatctttttttccccttttctttcgatctaaataagtggttttcacatctaccaagtttttccttttgtgttttc 7646442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 36943432 - 36943281
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||| || || |||||||||||||||| |||  | || |||||||||| ||||||||||||||||||| |||| |||||||    
T  36943432 ttttctagtgagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 36943334  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  36943333 actctacatcttttttcctcttttctttcaatctaaataagtagttttcacat 36943281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 9169566 - 9169393
Alignment:
Q  23 attttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcac 122  Q
    ||||||||||| || ||| | ||||||||| ||||||||||||||||||||  | || |||||||||| ||||||||||||||||| | |||| ||||||    
T  9169566 attttctagtgggagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggt-ggttttaggtcattttt-gacctagaatcac 9169469  T
Q  123 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    | |||||||| |||||| | ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  9169468 ccctctacatttttttttcccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 9169393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 4098914 - 4099067
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| |||||||||||||||| |||  |||| ||||| |||| || |||||||||||||||| |||| |||||||  |||||||||||||||| |    
T  4098914 caacttctctctaaactttctttctctttccttcatcgaggaagggt-ggctttaggtcattttttgacctagaatcacccatctacatcttttttcccc 4099012  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  4099013 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 4099067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 7448039 - 7448211
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | ||||||||| ||||||||||||| || |||  |||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  7448039 ttttctagtgggagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggt-ggttttaggtcattttttgtcctagaatcacc 7448137  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||| ||||||| ||| |||||| |||||||||| |||||||||||| ||| | | |||||||||||||    
T  7448138 cctctacatc-tttttccccttttctttcaatctaaataaatggttttcacatctatcaagtttttccttttgtg 7448211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 4778564 - 4778717
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||  |||||||||||||||| |||  |||| |||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||| | |    
T  4778564 caacttctttctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacccctctacatctttttttccc 4778662  T
Q  144 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    || |||||| || |||||||||||||||||||| ||| | | |||||| ||||||    
T  4778663 ttttctttcaatttaaataagtggttttcacatctatcaagtttttccctttgtg 4778717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 29279882 - 29279706
Alignment:
Q  20 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaat 119  Q
    |||||||||| |||||| ||| | ||||||||| |||| ||||||||||| |||| |||| ||||| | |  | ||||||||||||||||||   |||||    
T  29279882 ctaattttcttgtgagagaaactccaacttctctctaacctttctttctc-ttcattcatcgaggatgagc-gattttaggtcattttttgggtaaaaat 29279785  T
Q  120 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    | |  ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  29279784 cgctcctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg 29279706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 31788243 - 31788420
Alignment:
Q  20 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaat 119  Q
    ||||||||||||||||| ||| | ||||||||| |||||||||||||||  |||  |||| |||||| ||  |||||||||| |||||||| |||| |||    
T  31788243 ctaattttctagtgagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggc-ggttttaggtaattttttgacctagaat 31788341  T
Q  120 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||| |||||||||||||||||  || |||||| ||||||||||||| ||||||||| ||| | | | |||||||||||    
T  31788342 cacccctctacatcttttttcccattttctttcaatctaaataagtgattttcacatctatcaagttgttccttttgtg 31788420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 175
Target Start/End: Complemental strand, 17995006 - 17994874
Alignment:
Q  42 ttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcc 141  Q
    |||| |||||| |||||||||||||||||||| ||| | || ||| ||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  17995006 ttcatcttctctctaaactttctttctcattcggtcgtcgaagagaggt-ggttttaggtcattttttgccctaaaatcacctctctgcatcttttttcc 17994908  T
Q  142 tcttatctttccatctaaataagtggttttcaca 175  Q
    | || |||||| |||| |||||||||||||||||    
T  17994907 tattttctttcaatcttaataagtggttttcaca 17994874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 43397427 - 43397256
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | |||||||||  |||||||||||| |  |||  |||| ||| |||||| ||||||||||||||||||| |||| |||||||    
T  43397427 ttttctagtgagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggt-ggttttaggtcattttttgacctagaatcacc 43397329  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||  | ||| |||||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  43397328 tctctacatcttttt--cccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtg 43397256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 176
Target Start/End: Original strand, 18763265 - 18763409
Alignment:
Q  30 agtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactcta 129  Q
    ||||||| ||| | ||||||||| |||||||||||||| | ||||  ||| |||||| ||| ||||||| ||||||||||| |||| ||||||| |||||    
T  18763265 agtgagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggt-ggttttatgtcattttttgacctagaatcacccctcta 18763363  T
Q  130 catcttttttcctcttatctttccatctaaataagtggttttcacat 176  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||||    
T  18763364 catcttttttcc-cttttctttcaatctaaataagtggttttcacat 18763409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 1421462 - 1421617
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcc-taaaatcac 122  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| |||  |||| |||||||||| |||||||||||||||||| |   || ||||||    
T  1421462 ttttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcatttttttgatatagaatcac 1421560  T
Q  123 cactctacatctttttt---cctcttatctttccatctaaataagtggttttcacat 176  Q
    | |||||||||||||||   || ||| |||||| |||||||||||||||||||||||    
T  1421561 ccctctacatcttttttttcccccttttctttcaatctaaataagtggttttcacat 1421617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 11985538 - 11985366
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||| ||||| ||| | ||||||||| |||||||||||||||| |||| || | |||||| ||| ||||||| ||||||||||  |||| |||||||    
T  11985538 ttttctaatgagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggt-ggttttaagtcattttttaacctagaatcacc 11985440  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||| |||||| || ||| |||||| || |||||||||||||||||||||||| | | |||| ||||||||    
T  11985439 cctctacaactttttccc-cttttctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtg 11985366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 8809094 - 8809245
Alignment:
Q  45 aacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 144  Q
    |||||||| |||||||||||||||| ||||  | | |||||  || ||||||||| ||| |||||| |||||||||||| ||||||||||||||||||||    
T  8809094 aacttctctctaaactttctttctccttcatacgtcgaggacagg-tggttttagatca-tttttgacctaaaatcacccctctacatcttttttcctct 8809191  T
Q  145 tatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    | |||||| ||| |||||||||| || ||||||||| | | |||||||||||||    
T  8809192 tttctttcaatcaaaataagtggcttgcacatatattaagtttttccttttgtg 8809245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 230
Target Start/End: Complemental strand, 37876892 - 37876701
Alignment:
Q  38 aaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttt 137  Q
    ||||| ||||||||| |||||||||||||||  |||  |||| |||||||||| |||||||||||| |||||| |||| |||||||  | ||||||||||    
T  37876892 aaattccaacttctctctaaactttctttcttcttcgttcatcgaggaggggt-ggttttaggtcaatttttgacctagaatcacccttgtacatctttt 37876794  T
Q  138 ttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgtt 230  Q
    | ||  || |||||  ||||||||||||||||||||||| ||| |   |||| ||||||||||||  | |||||| || |||||| |||||||    
T  37876793 tcccctttttcttttaatctaaataagtggttttcacatctatcaaattttttcttttgtgatttggtcgtctaagtgcggcgttttgttgtt 37876701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 12648226 - 12648078
Alignment:
Q  30 agtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactcta 129  Q
    ||||||| ||| | |||||||||  |||  |||||||||| || | || |||||||||||| ||||||||||||||||||| |||| ||||||| ||| |    
T  12648226 agtgagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggt-ggttttaggtcattttttgacctagaatcacccctcca 12648128  T
Q  130 catcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||| ||||| |||||| ||||||||||||| ||| |||||||||    
T  12648127 catctttttt-ctcttttctttcaatctaaataagtgatttccacatatat 12648078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 166
Target Start/End: Complemental strand, 27097693 - 27097573
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| |||||||||||||||| |||  |||| ||||||||| || ||||||||||||||||| |||| ||||||| ||||||||||||||||| |    
T  27097693 caacttctctctaaactttctttctccttcgttcatcgaggagggg-tgattttaggtcattttttgacctagaatcacc-ctctacatcttttttcccc 27097596  T
Q  144 ttatctttccatctaaataagtg 166  Q
    || |||||  |||||||||||||    
T  27097595 ttttcttttgatctaaataagtg 27097573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 4904444 - 4904281
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||| ||| ||| ||||||||||| ||||||||||||||||||||  | ||||| ||| ||| ||||||| ||||||||||| |||| |||||||    
T  4904444 ttttttagtaagagaaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggt-ggttttatgtcattttttgacctataatcacc 4904346  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||| |||||||||||          |||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  4904345 actttacatcttttt----------tttcaatctaaataagtggttttcacatatatcaagttttttcttttgtg 4904281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 7678181 - 7678024
Alignment:
Q  29 tagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 128  Q
    |||||||| ||| | ||||||||| |||||||||||||||| |||  | || || ||||||| ||||||||||||||||||| |||| ||||||| ||||    
T  7678181 tagtgagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggt-ggttttaggtcattttttgacctagaatcacccctct 7678083  T
Q  129 acatctttttt------cctcttatctttccatctaaataagtggttttcacatatata 181  Q
    |||||||||||       | ||| |||||| ||||||||||||||||||||||| ||||    
T  7678082 acatctttttttttttctcccttttctttcaatctaaataagtggttttcacatctata 7678024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 138
Target Start/End: Complemental strand, 12677604 - 12677491
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||   |||| ||||||||| | |||| ||||||||||||| |||| |||||||    
T  12677604 ttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagggg-tagtttaaggtcattttttgacctagaatcacc 12677506  T
Q  124 actctacatcttttt 138  Q
     ||||||||||||||    
T  12677505 cctctacatcttttt 12677491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 198
Target Start/End: Original strand, 38444982 - 38445130
Alignment:
Q  48 ttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 147  Q
    ||||| |||||||||||||||| |||  |||| || ||| ||| ||||||||||||||||| |  ||| ||||||| |||||||||||||||||  || |    
T  38444982 ttctctctaaactttctttctccttcgttcatcgatgagaggt-ggttttaggtcattttt-gatctagaatcacccctctacatcttttttcccttttt 38445079  T
Q  148 ctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||||| || |||||||||||||||||||| ||| | | |||| ||||||||    
T  38445080 ctttcaatataaataagtggttttcacatctatcaagttttttcttttgtg 38445130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 11833341 - 11833430
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||||||||||||| | ||||||||   || |||||||||||| ||||| |||||| || ||||||||||||||||||||||||    
T  11833341 tggttttaggtcattttttgacttaaaatcattcctttacatctttttttctcttttctttcaatttaaataagtggttttcacatatat 11833430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 230
Target Start/End: Complemental strand, 10237452 - 10237318
Alignment:
Q  94 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcctt 193  Q
    |||||||||| |||||| |||| ||||||| ||||||||||||||||| ||| |||||| ||||||||||||| |||||||||| || | | |||| |||    
T  10237452 ttttaggtcaatttttgacctagaatcacccctctacatcttttttcccctt-tctttcaatctaaataagtgattttcacatacatcaag-tttttctt 10237355  T
Q  194 ttgtgatttcattgtctaattgtggcgttgtgttgtt 230  Q
    | |||||||| | |||| | || | ||||||||||||    
T  10237354 tcgtgatttcgtcgtcttagtgcgacgttgtgttgtt 10237318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 19062594 - 19062491
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttc 190  Q
    ||||||||||| ||||||||  ||| ||||||| ||||||||| ||||||| ||| |||||| ||||||||||||||||||||||| ||| | | |||||    
T  19062594 tggttttaggttattttttgaactagaatcacccctctacatcctttttcc-cttttctttcaatctaaataagtggttttcacatctatcaagtttttc 19062496  T
Q  191 ctttt 195  Q
    |||||    
T  19062495 ctttt 19062491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 32448882 - 32448782
Alignment:
Q  71 ttcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttt 170  Q
    |||| |||| |||||||||| |||||||||||||| |||| |||||||||||| |||| |||| ||||||| ||| |||||| ||||||||||||| |||    
T  32448882 ttcactcatcgaggaggggt-ggttttaggtcattatttgacctaaaatcacccctctgcatc-tttttcccctt-tctttcgatctaaataagtgattt 32448786  T
Q  171 tcac 174  Q
    ||||    
T  32448785 tcac 32448782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 31128977 - 31128915
Alignment:
Q  136 ttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||||||| |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  31128977 ttttcctcttttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg 31128915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 1415422 - 1415510
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    ||||||||||| ||||||||  ||| ||||||| ||||||||||||||||| ||| |||||| || |||||||||| |||||||| ||||    
T  1415422 tggttttaggttattttttgatctagaatcacccctctacatcttttttcc-cttttctttcaatttaaataagtgattttcacacatat 1415510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 177
Target Start/End: Original strand, 14955350 - 14955465
Alignment:
Q  60 tttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 159  Q
    |||||| ||| |||| |||| |||||||||| | ||||| |||| |||||| |||| ||||| | |||| |||||||||||||||| |||||| ||||||    
T  14955350 tttcttcctctttcactcatcgaggaggggt-gattttaagtcaatttttgacctagaatcatccctctgcatcttttttcctctt-tctttcaatctaa 14955447  T
Q  160 ataagtggttttcacata 177  Q
    ||||||| ||| ||||||    
T  14955448 ataagtgatttccacata 14955465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 35220122 - 35220231
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| | |||| |||| |||||||||||||||| |||| |||| ||    ||| ||||||||||| |||||||| |||| |||||||    
T  35220122 ttttctagtgagagaaactccaacctctctctaaactttctttctccttcattcatcga----ggggtggttttaggttattttttgacctagaatcacc 35220217  T
Q  124 actctacatctttt 137  Q
     |||| ||||||||    
T  35220218 cctctccatctttt 35220231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 4041820 - 4041730
Alignment:
Q  107 tttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||| |||| ||||||| |||||||| ||||||||  || |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  4041820 tttgacctagaatcacccctctacattttttttcccgtt-tctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 4041730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 5428156 - 5428003
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| ||||| |||||||||| |||  |||| |||||||||| |||||||||| | |||||| |||| | ||| |  |||||||||||||||| |    
T  5428156 caacttctctctaaattttctttctccttcgttcatcgaggaggggt-ggttttaggttaatttttgacctagagtcatcgttctacatcttttttcccc 5428058  T
Q  144 -ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     || |||||| ||||||||||||  ||||||||| ||| | | |||| ||||||||    
T  5428057 tttttctttcaatctaaataagt-tttttcacatctatcaagttttttcttttgtg 5428003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 29173962 - 29173855
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc--ttatctttccatctaaataagtggttttcacatatataaggcttt 188  Q
    |||||||||||  ||||||| |||||||||  | |||||||||||||||  ||  || |||||| ||| ||||||||||||||||||||| | ||| |||    
T  29173962 tggttttaggt--ttttttgacctaaaatcgtccctctacatctttttttttcccttttctttcaatccaaataagtggttttcacatatttcaggtttt 29173865  T
Q  189 tccttttgtg 198  Q
    ||||||||||    
T  29173864 tccttttgtg 29173855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 31129056 - 31128974
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcatttt 107  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| |||  | || ||||||||| || ||||||||||||||    
T  31129056 ttttttagtgagaaaaacttcaacttctctctaaactttctttctccttcgttgatcgaggagggg-tgattttaggtcatttt 31128974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 25509378 - 25509200
Alignment:
Q  20 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcatttttt--ggcctaaa 117  Q
    ||||||||||||||||||||| |  ||||| || |||| ||||||||||  |||  |||| |||||  ||| ||||||||||| ||||||  |  |||||    
T  25509378 ctaattttctagtgagaaaaactcaaacttttctctaa-ctttctttcttcttcgttcatcgaggaatggt-ggttttaggtctttttttttgtactaaa 25509281  T
Q  118 atcaccactctacatctttttt-cctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||| |||||||  |||||| |||||| |||||| |||||||||| ||||||| | |||||| | | |||||||||||||    
T  25509280 atcacc-ctctacagatttttttcctcttttctttcaatctaaataaatggttttaagatatatcaagtttttccttttgtg 25509200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 37994081 - 37994216
Alignment:
Q  39 aatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttt 138  Q
    |||| ||||||||| |||   |||||||||| |||| |||| ||||| |||| |||||||||||| |||||| |||| ||||||| |||| ||| || ||    
T  37994081 aattccaacttctctctaggttttctttctctttcaatcatcgaggaagggt-ggttttaggtca-tttttgacctagaatcacccctctgcattttgtt 37994178  T
Q  139 tcctcttatctttccatctaaataagtggttttcacata 177  Q
    ||| ||| |||||| || |||||||||| ||||||||||    
T  37994179 tcccctt-tctttcgatttaaataagtgattttcacata 37994216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 6436468 - 6436568
Alignment:
Q  94 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcctt 193  Q
    ||||||||||||||||| | || ||||||| |||| || | ||||||||| | |||||| ||||||||||||| |||||||| |||||| | |||| |||    
T  6436468 ttttaggtcattttttgacatagaatcacccctctgca-catttttcctcatttctttcgatctaaataagtgattttcacacatataaagttttttctt 6436566  T
Q  194 tt 195  Q
    ||    
T  6436567 tt 6436568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 3308787 - 3308881
Alignment:
Q  81 gaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    |||||||||| | |||||||||| |||||| |||| ||||||| || | |||||||||||| ||| | |||| ||||||||||||| ||||||||||    
T  3308787 gaggaggggt-gattttaggtcaatttttgacctagaatcacccctttgcatcttttttcccctt-tatttcaatctaaataagtgattttcacata 3308881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 18108008 - 18107891
Alignment:
Q  60 tttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 159  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||||||||||| |||| ||||||| || | ||||||||  || ||| |||||| |  |||    
T  18108008 tttctttctctttcattcattgaggaatggt-ggttttaggtcattttttgacctagaatcacctctttgcatcttttaccc-ctt-tctttcaaattaa 18107912  T
Q  160 ataagtggttttcacatatat 180  Q
    |||||||||||||||| ||||    
T  18107911 ataagtggttttcacacatat 18107891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 30400281 - 30400191
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcac-cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    ||||||||| |||||||||| ||||||||||| |  ||||||||||||||    || |||||  ||||||||||||| |||||||||||||    
T  30400281 tggttttagatcattttttgacctaaaatcactccatctacatcttttttttctttttcttttaatctaaataagtgtttttcacatatat 30400191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 42698988 - 42698922
Alignment:
Q  19 tctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgagga 85  Q
    ||||||||| |||||||| ||| ||||||||||  |||||||||||||||| || | ||||||||||    
T  42698988 tctaattttttagtgagagaaacttcaacttctttctaaactttctttctcctttattcattgagga 42698922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 180
Target Start/End: Original strand, 24461250 - 24461382
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| ||||  |||  ||||| |||| ||||| ||||||||| ||||||||||||||||||| |||| ||||||  |||| ||||  |||| |||    
T  24461250 caacttctctctaagtttttattctctttcactcattaaggaggggt-ggttttaggtcattttttgacctagaatcactcctctgcatccgtttt-ctc 24461347  T
Q  144 ttatctttccatctaaataagtggttttcacatatat 180  Q
    |  | |||| ||||||||||||| ||| |||||||||    
T  24461348 t--tttttcaatctaaataagtgatttccacatatat 24461382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 29574901 - 29574787
Alignment:
Q  64 tttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataa 163  Q
    |||||| |||| || | |||||||||| |||||||| |||||||||| |||| ||||||| || | |||| ||||| |  || |||||| ||||||||||    
T  29574901 tttctctttcactcgtcgaggaggggt-ggttttagatcattttttgacctagaatcacc-ctgtgcatccttttttccattttctttcaatctaaataa 29574804  T
Q  164 gtggttttcacatatat 180  Q
    ||| ||| |||||||||    
T  29574803 gtgatttccacatatat 29574787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 36691753 - 36691837
Alignment:
Q  112 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||| ||||||| |||||| |||||| |||| || |||||| |||||||||||||| |||||||||||| | | |||| ||||||||    
T  36691753 cctagaatcacccctctacttcttttctcctttt-tctttcaatctaaataagtgg-tttcacatatatcaagttttttcttttgtg 36691837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 23933839 - 23933775
Alignment:
Q  115 aaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    ||||||||| ||||||||||||||| | ||| | |||| |||||||||||||  ||||||||||||    
T  23933839 aaaatcacctctctacatctttttttccctt-tatttcaatctaaataagtgactttcacatatat 23933775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 41694474 - 41694550
Alignment:
Q  93 gttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttt 170  Q
    ||||||||||||||||||   |||||||| || ||| |||||||||||| |||| ||||  |||||||||||| ||||    
T  41694474 gttttaggtcattttttgatttaaaatcatcattcttcatcttttttcccctta-cttttgatctaaataagtagttt 41694550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 15273 - 15445
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||| |||  || | |||||||||| ||||||||||||||||||| |||| |||||||    
T  15273 ttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 15371  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||| ||||||| ||| |||||| |||||||||||||||||||| || | | | | |||||||||||||    
T  15372 cctctacatc-tttttccccttttctttcaatctaaataagtggttttcatatctttcaagtttttccttttgtg 15445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 50567 - 50740
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| | ||||||||  |||||||||||||||| |||  ||||||||||||||| | |||||||||| |||||| |||| ||||| |    
T  50567 ttttctagtgggagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggt-gattttaggtcactttttgacctagaatcatc 50665  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  50666 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 50740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 72172 - 71999
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||||||||| || ||| ||||||||||| |||||||||||||||| |||  |||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  72172 ttttctagtgggagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 72074  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    | ||| ||||||||| || ||| |||||| ||| ||||||||||||||||||| ||| | | |||||| ||||||    
T  72073 attcttcatctttttcccccttttctttcaatccaaataagtggttttcacatctatcaagtttttccatttgtg 71999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 33056 - 32883
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| |  |||||||| |||||||||||||||  |||  | || ||||||| || ||||||||||||||||||| | || |||||||    
T  33056 ttttctagtgagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagt-ggttttaggtcattttttgacatagaatcacc 32958  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
     ||||||||||||| ||| ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  32957 cctctacatcttttgtccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 32883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 1125 - 1279
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||  ||| ||||||||||| ||||| |||||||||| |||  |||| |||||| ||| ||||||||||||||||||| |||| |||||||    
T  1125 ttttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggt-ggttttaggtcattttttgacctagaatcacc 1223  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
     |||||| |||||||||| ||| ||||||  ||||||||||||||||||||||||||    
T  1224 cctctacttcttttttcc-cttttctttcactctaaataagtggttttcacatatat 1279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 173
Target Start/End: Complemental strand, 15145 - 14998
Alignment:
Q  25 tttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacca 124  Q
    |||||||||||| ||| | ||| ||||| |||||||||||||||| |||| |||| ||||| | || || || |||| |||||||| |||| ||||||||    
T  15145 tttctagtgagagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggtt-aggttattttttgacctagaatcacca 15047  T
Q  125 ctctacatcttttttcctcttatctttccatctaaataagtggttttca 173  Q
    |||||||||||||||||  || |||||| |||||||||||| |||||||    
T  15046 ctctacatcttttttccctttttctttcaatctaaataagtcgttttca 14998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 198
Target Start/End: Complemental strand, 2120 - 1953
Alignment:
Q  29 tagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 128  Q
    |||||||| ||| | ||||||||  | |||||||||||||  |||| |||||||||||  || | ||||||||| ||||||  |||||||||||   |||    
T  2120 tagtgagagaaactccaacttctttcaaaactttctttcttcttcattcattgaggagatgt-gtttttaggtcttttttta-cctaaaatcactcatct 2023  T
Q  129 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    ||||||||||||||||| |||||| || |||||||||||||| ||||||||| | | |||||||||||||    
T  2022 acatcttttttcctcttttctttcaatttaaataagtggtttgcacatatatcaagtttttccttttgtg 1953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 234
Target Start/End: Complemental strand, 31548 - 31364
Alignment:
Q  55 taaactttctttctcattcagtcattgaggaggggttggttttaggtcatt-ttttggcctaaaatcaccactctacatcttttttcctcttatctttcc 153  Q
    ||||||||||||||| |||  |||| ||| ||| || | ||||| |||||| ||||  || ||||||||  ||||||||||||||||||||| ||||||     
T  31548 taaactttctttctccttcgttcatcgagcaggagt-gattttatgtcattgtttttaccaaaaatcactcctctacatcttttttcctcttttctttca 31450  T
Q  154 atctaaataagtggttttcacatatataaggcttttccttttgtgatt--tcatt---gtctaattgtggcgttgtgttgttagtc 234  Q
    || ||||||||| |||||||||||||| | | ||||||||||||| ||  | |||   |||||||||||||||| |||||||||||    
T  31449 atataaataagtagttttcacatatatcaagtttttccttttgtgttttgtgatttccgtctaattgtggcgttatgttgttagtc 31364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 58387 - 58233
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| ||| | ||||||||| ||||  |||| || || |||| || | |||||||||| ||||||||||||||||||| ||||||||||||    
T  58387 ttttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggt-ggttttaggtcattttttgacctaaaatcacc 58289  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
     |||| |||| ||||| | ||| |||||| ||||||||||||| ||| |||||||||    
T  58288 cctctgcatccttttttc-cttttctttcaatctaaataagtgatttccacatatat 58233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 2260 - 2134
Alignment:
Q  44 caacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 143  Q
    ||||||||| ||||||||| |||||| |||  |||| ||||||| || ||||||| |||||||||||  ||| ||||||| ||||||||||||||||| |    
T  2260 caacttctctctaaactttttttctccttcgttcatcgaggaggagt-ggttttaagtcattttttgatctagaatcacccctctacatcttttttcccc 2162  T
Q  144 -ttatctttccatctaaataagtggttt 170  Q
     || |||||| |||||||||||||||||    
T  2161 tttttctttcaatctaaataagtggttt 2134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 71524 - 71438
Alignment:
Q  91 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 180  Q
    |||||||||||||||||| | |||||||||||| |||||||| ||||  |||||| |||||| ||||||| |||||||||||||||||||    
T  71524 tggttttaggtcattttt-gacctaaaatcacccctctacatatttt--cctcttttctttcaatctaaacaagtggttttcacatatat 71438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 8295 - 8470
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    |||| |||||||| | | |||||||||||  |||||||||||||  ||    |||| |||||||||| ||||||| || |||||||| |||| |||||||    
T  8295 ttttttagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggt-ggttttaagttattttttgacctataatcacc 8393  T
Q  124 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 202  Q
     ||||||| |||||||  |||| |||||  | |||||||||||||||| ||||||||   | |||| ||||||||||||    
T  8394 cctctacacctttttt--tcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtgattt 8470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 198
Target Start/End: Original strand, 7521 - 7669
Alignment:
Q  47 cttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 146  Q
    |||||| ||||  |||||||||| || | |||| |||||||| | ||||||||||||||||||| |||| ||||||   ||| ||||||||  || |||     
T  7521 cttctctctaagttttctttctcctttattcatcgaggagggat-ggttttaggtcattttttgacctagaatcactcatctgcatcttttaccc-ctt- 7617  T
Q  147 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||| || |||||||||||||||||||||||| | | |||||||||||||    
T  7618 tctttcaatttaaataagtggttttcacatatatcaagtttttccttttgtg 7669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 1911 - 1831
Alignment:
Q  96 ttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 177  Q
    |||||||| |||||| |||| ||||||| |||| |||||||||||| ||| |||||| ||||||||||||| ||||||||||    
T  1911 ttaggtcaatttttgacctagaatcacctctctgcatcttttttcccctt-tctttcaatctaaataagtgattttcacata 1831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 180
Target Start/End: Original strand, 10681 - 10812
Alignment:
Q  45 aacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 144  Q
    |||||||| |||||||| ||| ||| |||| |||| |||||| ||| ||||||||||||||||  | |||||| ||||| ||||| ||||||||  || |    
T  10681 aacttctctctaaacttgcttcctccttcattcatcgaggagaggt-ggttttaggtcatttt--gacctaaagtcacccctctagatctttttcgcttt 10777  T
Q  145 tatctttccatctaaataagtggttttcacatatat 180  Q
    | |||||  || ||||||||||||||||||||||||    
T  10778 t-tctttgaatgtaaataagtggttttcacatatat 10812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 37929 - 38000
Alignment:
Q  126 tctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| | | | |||||||||||||    
T  37929 tctacatcttttttcccctt-tctttcaatctaaataagtggttttcacatatgtcaagtttttccttttgtg 38000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 10227 - 10176
Alignment:
Q  147 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 198  Q
    |||||||||||||||||||||||||||||||||| | | |||||||||||||    
T  10227 tctttccatctaaataagtggttttcacatatatcaagtttttccttttgtg 10176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 12721 - 12848
Alignment:
Q  48 ttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 147  Q
    ||||| || ||||||||||||| || | ||||  ||||| ||| ||||||||||||||||||| |||| ||||||| || |||||  ||||||  ||| |    
T  12721 ttctctcttaactttctttctctttgattcatcaaggagaggt-ggttttaggtcattttttgacctagaatcaccgctatacat-atttttctcctttt 12818  T
Q  148 ctttccatctaaataagtggttttcacata 177  Q
    || || || |||||||||||||||||||||    
T  12819 ctatcaatttaaataagtggttttcacata 12848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 25637 - 25525
Alignment:
Q  24 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 123  Q
    ||||||||||||| ||| |||||||| || |||||     |||||| |||  |||| |||||||||| ||||||| ||||||||||| |||| |||||||    
T  25637 ttttctagtgagagaaacttcaacttttctctaaaaaaattttctccttcgttcatcgaggaggggt-ggttttatgtcattttttgacctataatcacc 25539  T
Q  124 actctacatctttt 137  Q
     |||||||||||||    
T  25538 cctctacatctttt 25525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 7924 - 8029
Alignment:
Q  91 tggttttaggtcattttttgg-cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggctttt 189  Q
    ||||||| ||||||||||| | |||| ||||||| ||||||||||||||||    | |||||| |||||||| |||||||||||||| ||| | | ||||    
T  7924 tggttttgggtcatttttttgacctagaatcacc-ctctacatcttttttcta--tctctttcgatctaaattagtggttttcacatctatcaagttttt 8020  T
Q  190 ccttttgtg 198  Q
    |||||||||    
T  8021 ccttttgtg 8029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 25132 - 25261
Alignment:
Q  42 ttcaacttctcactaaactttctttctcattcagtcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttttt-- 139  Q
    |||||||| || |||||||||||||||| |||| ||||   ||||||| |||||||| |||| |||||| | |||||||||   |||| |||||||||      
T  25132 ttcaacttttctctaaactttctttctctttcattcat--cggagggg-tggttttaagtcactttttgacttaaaatcactcatctatatctttttttt 25228  T
Q  140 -cctctt-atctttccatctaaataagtggttt 170  Q
     ||||||  |||||| |||||||||||||||||    
T  25229 ccctcttcttctttcaatctaaataagtggttt 25261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University