View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5461_high_38 (Length: 238)
Name: NF5461_high_38
Description: NF5461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5461_high_38 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 43868145 - 43867924
Alignment:
| Q |
1 |
ccgagttcaggaacaagtggaagaaaactagtattgaagagaactttttccttgagacgttgttgttgttgttgaatcgacgaatttttgttgtggcggg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
43868145 |
ccgagttcaggaacaagtggaagaaaactagtattgaagagaactttttccttgagacgttgctgttgttgttgaatcgacgaatttttgttgtggcggg |
43868046 |
T |
|
| Q |
101 |
gagttcttgctttccttgtgaatccactgtgccatgcttgtgctgttgttgttaccttagcagatgcggtttgaaggcgaaccctttcgtgtctacttgc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
43868045 |
gagttcttgctttccttgtgaatccactgtgccatgcttgtgctgttgttgttaccttagcagacgcggtttgaaggcgaaccctttcgtgtctacttgc |
43867946 |
T |
|
| Q |
201 |
taatagatttgcagagtgaacc |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
43867945 |
taatagatttgcagagtgaacc |
43867924 |
T |
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