View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5462-Insertion-7 (Length: 570)
Name: NF5462-Insertion-7
Description: NF5462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5462-Insertion-7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 468; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 6 - 570
Target Start/End: Complemental strand, 35829790 - 35829224
Alignment:
| Q |
6 |
cagcatcttcattgtcctttaagctcaaatgtccatcaaaggattgtgattgtagtgatatgataacatcatagggtggaatttgaactaatgaagttgt |
105 |
Q |
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| T |
35829790 |
cagcatcttcattgtcctttaagctcaaatggccatcaaaggattgtgattgtagtgatatgataacatcatagggtgaaatttgaactaatgaagttgt |
35829691 |
T |
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| Q |
106 |
aatagaattgttgcagcctgagtcagctttgtaaagtataaaactaaggattagaattataatggttttggtaaatgaaaatatgacatgttttgagaaa |
205 |
Q |
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| T |
35829690 |
aatagaattgttgcagcctgagtcagctttgtaaagtataaaactaaggattagaattataatggttttggtaaatgaaaatatgacatgttttgagaaa |
35829591 |
T |
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| Q |
206 |
ctaacaagttttaaaaccatgannnnnnnn-cttcttataaaaattgcttaataagagagggggttgaatactgttctgctataaggaaatgtttgatgc |
304 |
Q |
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| T |
35829590 |
ctaacaagttttaaaaccatgatttttttttcttcttataaaaattgcttaataagagagggggttgaatactgttctgctataaggaaatgtttgatgc |
35829491 |
T |
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| Q |
305 |
aaatgaaaagttgagaagacaatttgaagaggtcaccaccttttataggcaaacctgatagtctgatggaggtgtccttgaggtgtgtttgatgcacctt |
404 |
Q |
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| T |
35829490 |
aaatgaaaagttgagaagacaatttgaagaggtcaccaccttttataggcaaacctgatagtctgatggaggtgtccttgaggtgtgtttgatgcacctt |
35829391 |
T |
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| Q |
405 |
gttatggtaacaaatttttcatcatgtgtatattggtcatagaaacaaagtacaagtaaaataa-nnnnnnnnnccccacaagttccattcgcgccggag |
503 |
Q |
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| T |
35829390 |
gtaatggtaacaaatttttcatcatgtgtatattggtcatagatacaaagtacaagtaaaataattattatttttcccataagttccattcgcgccggag |
35829291 |
T |
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| Q |
504 |
taatcatatccaaagtgtaccggaaattaaatgtgagtacctctttcgattgtgtctttttcattct |
570 |
Q |
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| T |
35829290 |
taatcatatccaaaatgtaccggaaattaaatgtcagtacctctttcgattgtgtctttttcattct |
35829224 |
T |
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