View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5463-Insertion-2 (Length: 857)
Name: NF5463-Insertion-2
Description: NF5463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5463-Insertion-2 |
 | |
|
| [»] chr3 (39 HSPs) |
| |
|
| [»] scaffold1439 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 827; Significance: 0; HSPs: 39)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 827; E-Value: 0
Query Start/End: Original strand, 3 - 857
Target Start/End: Complemental strand, 22358363 - 22357511
Alignment:
| Q |
3 |
caacacaaaggtcgtaaaacactttgatcgtcgtgtatggattacggtgtctcgaccatacaatacagaaaaagtgttgagggacattatgctcgagttt |
102 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358363 |
caacccaaaggtcgtaaaacactttgatcgtcgtgtatggattacggtgtctcgaccatacaatacagaaaaagtgttgagggacattatgctcgagttt |
22358264 |
T |
|
| Q |
103 |
tacaaacaacaaaggaaagttcctcctcagagtctccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatg |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358263 |
tacaaacaacaaaggaaagttcctcctcagagtctccgtcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatg |
22358164 |
T |
|
| Q |
203 |
ttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaag |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358163 |
ttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaag |
22358064 |
T |
|
| Q |
303 |
aaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataag |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358063 |
aaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataag |
22357964 |
T |
|
| Q |
403 |
aaggcattccatgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtag |
502 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22357963 |
aaggcattccatgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtag |
22357864 |
T |
|
| Q |
503 |
tcattggtggtattttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataag |
602 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22357863 |
tcattggtggtattttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataag |
22357764 |
T |
|
| Q |
603 |
aaaatttttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaa |
702 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22357763 |
aaaaattttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtatttt-ggattatatcctgaagactataaagttcattcaaa |
22357665 |
T |
|
| Q |
703 |
gacattgactcgacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacat |
802 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22357664 |
gacattgactcgacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacat |
22357565 |
T |
|
| Q |
803 |
agaagtttggtgcaagtagattcaatcagtattgatgggaagagtaaaacgttgt |
857 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22357564 |
agaagtttggtgcaagtagattcaatcagtattgat-ggaagagtaaaacgttgt |
22357511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 574; E-Value: 0
Query Start/End: Original strand, 9 - 856
Target Start/End: Complemental strand, 22443094 - 22442252
Alignment:
| Q |
9 |
aaaggtcgtaaaacactttgatcgtcgtgtatggattacggtgtctcgaccatacaatacagaaaaagtgttgagggacattatgctcgagttttacaaa |
108 |
Q |
| |
|
|||||| || || |||||||| ||| | ||||||| | |||||||| | ||| ||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22443094 |
aaaggtagttaagcactttgactgtcttttatggatcatggtgtctcaatcattcaatattgaaaaagtgttgagggacattatgctcgagttttacaaa |
22442995 |
T |
|
| Q |
109 |
caacaaaggaaagttcctcctcagagtctccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22442994 |
caacaaaggaaagttcctcctcagagtctccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtag |
22442895 |
T |
|
| Q |
209 |
tgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacat |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22442894 |
tgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacat |
22442795 |
T |
|
| Q |
309 |
ggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggca |
408 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22442794 |
ggatgttgcaaatacttgtaagaaatcttcttttgtt------tacgaactaaaaggtttgactgtagaacaatctttggagttgttcaataagaaggca |
22442701 |
T |
|
| Q |
409 |
ttccatgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattg |
508 |
Q |
| |
|
|| ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22442700 |
tttcatgacttaaacggacgttgtccaaaaaatcttattggtatatcttccaaaattgttgaaaaatgcaatggattaccactagcaattgtagtcattg |
22442601 |
T |
|
| Q |
509 |
gtggtattttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcag---agttagaggaatattccataataagaaa |
605 |
Q |
| |
|
|||||||||||||||||||||||| || | |||| ||||||||| |||||| ||||||||||||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
22442600 |
gtggtattttagctcccaaagatagaaatacaattgaatggtatgagtttaatgaaaatataaatgcagatcagtttaaggaatattccatagtaagaaa |
22442501 |
T |
|
| Q |
606 |
atttttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagac |
705 |
Q |
| |
|
| |||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||||||| ||| | ||||||||| |
|
|
| T |
22442500 |
aattttaggactcagttaccatgatttgccttgcaacctcaagtcatgtttcttgtatttt-ggattatatcccgaagactatgaagcttgttcaaagac |
22442402 |
T |
|
| Q |
706 |
attgactcgacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacataga |
805 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||| ||||||||||||| || ||||| |||||||||||||||||||||||| |||||| |||| |
|
|
| T |
22442401 |
attgactcgtcaatggatagctgaagggtttgtgaaagaatatggggaaaggacattggaaaaggttgcagaaggatatttaaaagtgttaatctgtaga |
22442302 |
T |
|
| Q |
806 |
agtttggtgcaagtagattcaatcagtattgatgggaagagtaaaacgttg |
856 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||| |||||||||||| |||| |
|
|
| T |
22442301 |
agtttggtgcaagtagtttcaaccagtattgat-ggaagagtaaaaagttg |
22442252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 3 - 856
Target Start/End: Complemental strand, 22635864 - 22635016
Alignment:
| Q |
3 |
caacacaaaggtcgtaaaacactttgatcgtcgtgtatggattacggtgtctcgaccatacaatacagaaaaagtgttgagggacattatgctcgagttt |
102 |
Q |
| |
|
|||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
22635864 |
caacccaaaggtcgtaaaatactttgattgtcgtgtatggattacggtgtctcgaccatacaatacagaaaaagtgttgcgagacattatgctcgagttt |
22635765 |
T |
|
| Q |
103 |
tacaaacaacaaaggaaagttcctcctcagagtctccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatg |
202 |
Q |
| |
|
|||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| ||||||||||| |
|
|
| T |
22635764 |
tacaaacaacaaggggaagttcctcctgagagtctccatcaaatggatcgaaagtcattagttgatgaagtgagaaaccactttcaaggaaaaaggtatg |
22635665 |
T |
|
| Q |
203 |
ttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaag |
302 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
22635664 |
ttttagtgtttgatgatgtatgggagtcacatttttggtctgatattgaatttgctatgattgataacaaaaatagttgtaggatattaatcacaacaag |
22635565 |
T |
|
| Q |
303 |
aaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataag |
402 |
Q |
| |
|
||| | ||||||||| ||| ||||||| ||| ||||||| | ||||| || | || || |||| ||| | |||||||||| || ||||| ||| |
|
|
| T |
22635564 |
aaaaaaggatgttgcaaatgcttgtaataaa---tcttttggtaaagtgcataatctggaacgtttatctgaaaaacaatctttggaattgtttctaaag |
22635468 |
T |
|
| Q |
403 |
aaggcattccatgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtag |
502 |
Q |
| |
|
||||| |||||| ||| | || || ||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
22635467 |
aaggcgctccatggcttggacggcatttttcctgaatatcttattgatatatcttccaaaattgtcgaaaaatgcaaaggattacctctagcaattgtag |
22635368 |
T |
|
| Q |
503 |
tcattggtggtattttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataag |
602 |
Q |
| |
|
||||||||| |||| || ||| || |||| || | |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22635367 |
tcattggtgatattctatctcgcacggatagaaattcaatagaatggtcgaagtttagtgaaaatataaatgcagagttagaggaatattccatgataag |
22635268 |
T |
|
| Q |
603 |
aaaatttttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaa |
702 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||| |
|
|
| T |
22635267 |
aaaaattttaggacttagttaccatgatttgccatgctacctcaagtcatgtttcttgtatttt-ggattatatcctgaagactatatagttcgttcaaa |
22635169 |
T |
|
| Q |
703 |
gacattgactcgacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacat |
802 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||| || | ||| ||| || | |||||||||||||||||||||||| |||||| || ||| |
|
|
| T |
22635168 |
aacattgactcgccaatggattgctgaagggttcgtgaaagaagacaggggaaggacatttgaagaggttgcagaaggatatttagtagagttgatccat |
22635069 |
T |
|
| Q |
803 |
agaagtttggtgcaagtagattcaatcagtattgatgggaagagtaaaacgttg |
856 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||| |||||||||||| |||| |
|
|
| T |
22635068 |
agaagtttggtgcaagtagtttcaactagtattgat-ggaagagtaaaaagttg |
22635016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 38 - 857
Target Start/End: Complemental strand, 22354137 - 22353321
Alignment:
| Q |
38 |
tatggattacggtgtctcgaccatacaatacagaaaaagtgttgagggacattatgctcgagttttacaaacaacaaaggaaagttcctcctcagagtct |
137 |
Q |
| |
|
||||||| ||||| |||||||||||||| | |||||||||||||||||||||| |||| ||| |||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
22354137 |
tatggatcacggtatctcgaccatacaacatagaaaaagtgttgagggacattttgctggagatttacaaacaacgaaggaaagatcctcctcagagtct |
22354038 |
T |
|
| Q |
138 |
ccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacatttt |
237 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
22354037 |
ccatcaaatggatcgaaagccattagttgatgaagtgagaaacaacttgcaaggaaaaaggtacgttgtagtgtttgataatgtataggagtcacatttt |
22353938 |
T |
|
| Q |
238 |
ttgcatgatatt-gaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatct |
336 |
Q |
| |
|
| ||| |||||| |||||||||||||||||||||||||| |||| || |||||||||||| |||||||||| ||||||| | || ||||||||||||| |
|
|
| T |
22353937 |
tggcaagatatttgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacaaggatgttacagatgattgtaagaaatct |
22353838 |
T |
|
| Q |
337 |
tcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgtccag |
436 |
Q |
| |
|
| | | | ||||| |||| || || |||| ||| | |||||||||| || ||||| || |||||||| |||| |||||| | ||| ||||||| |
|
|
| T |
22353837 |
t---tcggtaaagtgcatgagctggaacgtttatctgaaaaacaatctttggatttgtttaaaaagaaggcgttccgtgacttggacggattttgtccaa |
22353741 |
T |
|
| Q |
437 |
aaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagataaaat |
536 |
Q |
| |
|
|||||||| || ||||||||||| ||||| || ||||||||||||||||||| || |||||||||||||| ||| ||||||| ||| |||||||| || |
|
|
| T |
22353740 |
aaaatcttttttatatatcttccgaaattattgaaaaatgcaaaggattacctctcgcaattgtagtcataggtaatattttatctcgcaaagatagaaa |
22353641 |
T |
|
| Q |
537 |
tccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaatttttaggatttagttaccatgatttgcc- |
635 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22353640 |
tccaattgaatggtctaagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgatttgcct |
22353541 |
T |
|
| Q |
636 |
ttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattgctgaagggtt |
735 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| ||||| | ||||||||||| |||||||||||||| ||||| |
|
|
| T |
22353540 |
ttactacctcaagtcatgtttcttgtatttt-ggattatatctcgaagactacgaagtttattcagatacattgactcgtcaatggattgctgaggggtt |
22353442 |
T |
|
| Q |
736 |
tgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagtagattcaatcagtatt |
835 |
Q |
| |
|
||||||| |||| |||| ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22353441 |
tgtgaaagaatacgggggaaggacaatggaagaggttgcagaaggatatttaaaagagttaatccatagaagtttggtgcaagtagattcagtcagtatt |
22353342 |
T |
|
| Q |
836 |
gatgggaagagtaaaacgttgt |
857 |
Q |
| |
|
||| |||||||||||| ||||| |
|
|
| T |
22353341 |
gat-ggaagagtaaaaagttgt |
22353321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 9 - 857
Target Start/End: Complemental strand, 22468303 - 22467460
Alignment:
| Q |
9 |
aaaggtcgtaaaacactttgatcgtcgtgtatggattacggtgtctcgaccatacaatacagaaaaagtgttgagggacattatgctcgagttttacaaa |
108 |
Q |
| |
|
||||||||| ||||| |||||| ||| ||||||||| |||||||||||||||||||||| ||||||| |||||||||| ||| ||||||| |||||||| |
|
|
| T |
22468303 |
aaaggtcgttaaacattttgattgtcatgtatggatcacggtgtctcgaccatacaatatagaaaaattgttgagggaaattttgctcgatatttacaaa |
22468204 |
T |
|
| Q |
109 |
caacaaaggaaagttcctcctcagagtctccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtag |
208 |
Q |
| |
|
|||||| || ||| ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
|
|
| T |
22468203 |
caacaaggggaagatcctcctcagagtctccatcagatggatcgaaagccattagttgatgaagtgagaaactacttgcaaggaaaaaggtatgttatag |
22468104 |
T |
|
| Q |
209 |
tgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacat |
308 |
Q |
| |
|
||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||| |||| || |||||||||||| || ||||||| |
|
|
| T |
22468103 |
tgtttgatgatgtatgggattcacatttttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacgagaaacaa |
22468004 |
T |
|
| Q |
309 |
ggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggca |
408 |
Q |
| |
|
|| |||||| || ||||||||||||||| ||| | ||||| |||| || || |||| ||| |||||| || || || ||||| || |||||||| |
|
|
| T |
22468003 |
ggttgttgcagatgcttgtaagaaatctt---ttggtaaagtgcatgagctggaacgtttatctgaagaacagtccttggaattgtttaaaaagaaggcg |
22467907 |
T |
|
| Q |
409 |
ttccatgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattg |
508 |
Q |
| |
|
||||||||||| | ||| |||||||||||||||| |||| |||||||||||||||||| |||| |||||||||||||| ||||||||||| |||| | |
|
|
| T |
22467906 |
ttccatgacttggacggagtttgtccagaaaatctttttgacatatcttccaaaattgttgaaaactgcaaaggattacctctagcaattgttgtcaccg |
22467807 |
T |
|
| Q |
509 |
gtggtattttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaatt |
608 |
Q |
| |
|
||| ||||||| ||| |||| ||| || |||||| ||||||| ||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||| | |
|
|
| T |
22467806 |
gtgatattttatctcgcaaaaatagaaatccaattgaatggtctaaatttagtgaaaatataaatgtagagttagagggatattccacaataagaaaaat |
22467707 |
T |
|
| Q |
609 |
tttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacatt |
708 |
Q |
| |
|
||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
22467706 |
tttaggatttagttaccataatttaccttacaacctcaagtcatgtttcttgtatttt-ggattatatcctgaagactatatagttcattcaaagacgtt |
22467608 |
T |
|
| Q |
709 |
gactcgacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagt |
808 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| || | ||| || || ||||||||||||| ||||||||||||| |||||| || ||||||||| |
|
|
| T |
22467607 |
gactcgccaatggattgctgaagggtttgtgaaggaagacagggggaggacattggaagaggttgctgaaggatatttaatagagttgatccatagaagt |
22467508 |
T |
|
| Q |
809 |
ttggtgcaagtagattcaatcagtattgatgggaagagtaaaacgttgt |
857 |
Q |
| |
|
||||||||||||| |||||| ||||||||| |||||||||||| ||||| |
|
|
| T |
22467507 |
ttggtgcaagtagtttcaataagtattgat-ggaagagtaaaaagttgt |
22467460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 9 - 827
Target Start/End: Complemental strand, 22630794 - 22629979
Alignment:
| Q |
9 |
aaaggtcgtaaaacactttgatcgtcgtgtatggattacggtgtctcgaccatacaatacagaaaaagtgttgagggacattatgctcgagttttacaaa |
108 |
Q |
| |
|
||||||||| |||||||||||| ||| || |||||| |||||||||||||||||||||| ||||| | |||||||||||||| |||||||| |||||||| |
|
|
| T |
22630794 |
aaaggtcgttaaacactttgattgtcatgaatggatcacggtgtctcgaccatacaatatagaaacattgttgagggacattttgctcgagatttacaaa |
22630695 |
T |
|
| Q |
109 |
caacaaaggaaagttcctcctcagagtctccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatg-ttgta |
207 |
Q |
| |
|
|||||| |||||| ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||| | ||||| |
|
|
| T |
22630694 |
caacaagggaaagatcctcctcaaagtctccatcaaatggatcgaaagccattagttgatgaagtgagaaactacttgcaaggaaaaaggtacgtttgta |
22630595 |
T |
|
| Q |
208 |
gtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaaca |
307 |
Q |
| |
|
||||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||||||||||| |||| || |||||||||||| |||||||||| |
|
|
| T |
22630594 |
gtgtttgatgatgtatgggaggcacaattttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaaca |
22630495 |
T |
|
| Q |
308 |
tggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggc |
407 |
Q |
| |
|
||||||||| || ||||||||||| ||||||| ||||| |||| || || |||| ||| |||||| ||||| || ||||| || ||||| || |
|
|
| T |
22630494 |
aggatgttgcagatgcttgtaagaaa---tcttttggcaaagtgcatgagctggaacgtttatctgaagaacagtctttggaattgtttaaaaagaaagc |
22630398 |
T |
|
| Q |
408 |
attccatgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcatt |
507 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22630397 |
gttccatgacttggatggattttgtccagaaaatctttttgacatatcttccaaaattgttgaaaaatgcaaaggattacctctagcaattgtagtcacc |
22630298 |
T |
|
| Q |
508 |
ggtggtattttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaat |
607 |
Q |
| |
|
|||| ||||||| ||| ||||| || || |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
22630297 |
ggtgatattttatctcgcaaagttagaaatccaattgaatggtctaagtttagtgaaaatataaatgtagagttagaggaatattccacaataagaaaaa |
22630198 |
T |
|
| Q |
608 |
ttttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacat |
707 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||| | |
|
|
| T |
22630197 |
atttaggatttagttaccatgatttaccttacaacctcaagtcatgtttcttgtatttt-ggattctatcctgaagactatatagttcgttcaaaggtgt |
22630099 |
T |
|
| Q |
708 |
tgactcgacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaag |
807 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||| || || |||||| |||||||||||| |||||||||||||| |||||| | | |||||| |
|
|
| T |
22630098 |
tgactcgccaatggatcgctgaagggtttgtgaaagaagtcaagggaagaacattggaagaggttggagaaggatatttaatagagttggtccgtagaag |
22629999 |
T |
|
| Q |
808 |
tttggtgcaagtagattcaa |
827 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
22629998 |
tttggtgcaagtagtttcaa |
22629979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 9 - 840
Target Start/End: Complemental strand, 22368267 - 22367449
Alignment:
| Q |
9 |
aaaggtcgtaaaacactttgatcgtcgtgtatggattacggtgtctcgaccatacaatacagaaaaagtgttgagggacattatgctcgagttttacaaa |
108 |
Q |
| |
|
||||||||| |||||||||||| ||||| ||||||| ||||| ||||||||||| |||| ||||||| || ||| |||||| ||| |
|
|
| T |
22368267 |
aaaggtcgttaaacactttgattgtcgtttatggatcacggtttctcgaccatataataaagaaaaattgctgaaggacatactgc-------------- |
22368182 |
T |
|
| Q |
109 |
caacaaaggaaagttcctcctcagagtctccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtag |
208 |
Q |
| |
|
||||| ||||| ||||||||| ||||| |||||||||||| || ||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
22368181 |
-aacaagggaaatgtcctcctcaaagtcttcatcaaatggatggaaagttattagttgatgaagtgagaaactacttgcaaggaaaaaggtacgttgtag |
22368083 |
T |
|
| Q |
209 |
tgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacat |
308 |
Q |
| |
|
||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||||||||||||| |||| || |||||||||||| ||||||||| |
|
|
| T |
22368082 |
tgtttgatgatgtatgggactcacatttttggaatgatattgaattttctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacga |
22367983 |
T |
|
| Q |
309 |
ggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggca |
408 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||| || |||| ||||||| | || |||| ||||||| || ||||||||||||||||| |
|
|
| T |
22367982 |
ggatgttgcagatgcttgtaagaaatcttcttttgttgaagtgcataaacttgaaggtttaagtgaagaaaaatctttagaattgttcaataagaaggcg |
22367883 |
T |
|
| Q |
409 |
ttccatgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattg |
508 |
Q |
| |
|
||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
22367882 |
ttccatgacttgagcggatattgtccagaaaatcttattgatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattg |
22367783 |
T |
|
| Q |
509 |
gtggtattttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcag---agttagaggaatattccataataagaaa |
605 |
Q |
| |
|
|||||||||||||| |||||||| | |||||| ||||||| |||||||||||||||||||||||||| ||| | ||||||||||||| |||| ||| |
|
|
| T |
22367782 |
gtggtattttagcttgcaaagataggaatccaattgaatggtctaagtttagtgaaaatataaatgcagatcagtcaaaggaatattccatgataaaaaa |
22367683 |
T |
|
| Q |
606 |
atttttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagac |
705 |
Q |
| |
|
| || ||||| ||||||||||||||||||||| | |||||||||||||||||||||| ||| ||||||||||||||||||| || |||| |||||| | |
|
|
| T |
22367682 |
aattctaggacttagttaccatgatttgccttgcaacctcaagtcatgtttcttgtacttt-ggattatatcctgaagactcaaatgttcgttcaaatat |
22367584 |
T |
|
| Q |
706 |
attgactcgacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacataga |
805 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| || | ||| || || |||||||||||||||||||| |||||| |||||| || | |||| |
|
|
| T |
22367583 |
attgactcgtcaatggattgctgaagggtttgtgaaagaagaaaggggaatgacattggaagaggttgcagaaggacatttaatagagttgatccgtaga |
22367484 |
T |
|
| Q |
806 |
agtttggtgcaagtagattcaatcagtattgatgg |
840 |
Q |
| |
|
|||||||||| ||||||| |||| ||||||||| |
|
|
| T |
22367483 |
agtttggtgcgagtagatgggatcactattgatgg |
22367449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 17 - 857
Target Start/End: Complemental strand, 22436981 - 22436140
Alignment:
| Q |
17 |
taaaacactttgatcgtcgtgtatggattacggtgtctcgaccatacaatacagaaaaagtgttgagggacattatgctcgagttttacaaacaacaaag |
116 |
Q |
| |
|
||||||| ||||| ||| ||||||||| || ||||||| | |||||| || ||||||| |||||||||||||| |||||||| |||||||||||||| | |
|
|
| T |
22436981 |
taaaacaatttgactgtcatgtatggatcacagtgtctcaatcatacagtaaagaaaaattgttgagggacattttgctcgagatttacaaacaacaagg |
22436882 |
T |
|
| Q |
117 |
gaaagttcctcctcagagtctccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgat |
216 |
Q |
| |
|
||||| ||||||||||||| | || ||||| | || || | || |||||||||||| ||| | ||||| |||||||||| |||| |||||||| |
|
|
| T |
22436881 |
gaaagatcctcctcagagtatatatgaaatgaacggagagccgttgattgatgaagtgataaaacagttgcagcaaaaaaggtactttgtcgtgtttgac |
22436782 |
T |
|
| Q |
217 |
gatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttg |
316 |
Q |
| |
|
||||||||| | | | || ||| | ||||||||||||||||||||||||||||| ||| ||||||| | |||||||||| ||||| || ||| |||||| |
|
|
| T |
22436781 |
gatgtatggaacttaaatatttggaatgatattgaatttgctatgattgataacttaaatggttctaaggtattaatcacaacaaggaaaatgaatgttg |
22436682 |
T |
|
| Q |
317 |
cgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatga |
416 |
Q |
| |
|
| ||| ||| ||||| |||||||||||||||||| ||||||| ||||||| |||| |||| ||||||| || |||||||||||||||||||||||| | |
|
|
| T |
22436681 |
caaattcttttaagagatcttcttttgttgaagtacatgaacttcaaggtttaactgaagaaaaatctttagaattgttcaataagaaggcattccataa |
22436582 |
T |
|
| Q |
417 |
cttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtatt |
516 |
Q |
| |
|
||| | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || |
|
|
| T |
22436581 |
cttgagtggatgttgtccacaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtctt |
22436482 |
T |
|
| Q |
517 |
ttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcaga---gttagaggaatattccataataagaaaatttttag |
613 |
Q |
| |
|
||| || |||||||| || ||| | |||||||| |||||||||||||||||||||||||| || | | ||||||||||||||||||||| || ||| |
|
|
| T |
22436481 |
ttatcttgcaaagatagaaatcctactgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctag |
22436382 |
T |
|
| Q |
614 |
gatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactc |
713 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| |||||| |||||||||| |
|
|
| T |
22436381 |
gatttagttaccatgatttgccttactacctcaagtcgtgtttcttgtatttt-ggattatatcctgaagactatatagttcgttcaaaaacattgactc |
22436283 |
T |
|
| Q |
714 |
gacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggt |
813 |
Q |
| |
|
| |||||||||||||||||||| |||||| || | ||| ||| || ||||||| ||||| |||||||||||| |||||| | ||||||||||||| |
|
|
| T |
22436282 |
gccaatggattgctgaagggttcgtgaaagaagagaggggaaggacattggaagatattgcaaaaggatatttaatagagttggtcaatagaagtttggt |
22436183 |
T |
|
| Q |
814 |
gcaagtagattcaatcagtattgatgggaagagtaaaacgttgt |
857 |
Q |
| |
|
||| |||| |||||| ||||||||| |||||||||||| ||||| |
|
|
| T |
22436182 |
gcatgtagtttcaataagtattgat-ggaagagtaaaaagttgt |
22436140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 141 - 849
Target Start/End: Complemental strand, 22431396 - 22430687
Alignment:
| Q |
141 |
tcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacattttttg |
240 |
Q |
| |
|
||||||||||||| | | |||| ||||| || |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||| | |
|
|
| T |
22431396 |
tcaaatggatcgaaacttattacttgataaactgagaaactacttgcaaggaaaaaggtacgttgtagtgtttgatgatgtatgggagtcaaatttttgg |
22431297 |
T |
|
| Q |
241 |
catgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttctt |
340 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| || |||||||||||| |||||||||| ||||| || || |||||||||||||||||| |
|
|
| T |
22431296 |
tatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacaaggatggtgtagatgcttgtaagaaatcttctt |
22431197 |
T |
|
| Q |
341 |
ttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgtccagaaaa |
440 |
Q |
| |
|
||||||||||| ||||||| |||||||| || | |||| ||||||| || |||||||||||||| | ||||||||||| | ||| |||||||||||| |
|
|
| T |
22431196 |
ttgttgaagtgcatgaacttaaaggtttaaccgaagaaaaatctttagaattgttcaataagaaagtgttccatgacttgagcggatattgtccagaaaa |
22431097 |
T |
|
| Q |
441 |
tcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagataaaattcca |
540 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| | |||| |
|
|
| T |
22431096 |
tcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagataggaatcca |
22430997 |
T |
|
| Q |
541 |
atggaatggtataagtttagtgaaaatataaatgcag---agttagaggaatattccataataagaaaatttttaggatttagttaccatgatttgcctt |
637 |
Q |
| |
|
|| ||||||| |||||||||||||||||||||||||| || | | ||| || | | ||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
22430996 |
attgaatggtctaagtttagtgaaaatataaatgcagatcaggcaaatgaaaatcctgtgataagaaaaactttaggacttagttaccatgatttgcctt |
22430897 |
T |
|
| Q |
638 |
actacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattgctgaagggtttg |
737 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||||||| ||||||||| |||| ||||||||||||| ||| | |||||||||||||||||||||| |
|
|
| T |
22430896 |
gcaacctcaagtcatgtttcttgtatttt-ggattatatcctaaagactatatagtttattcaaagacattaacttgtcaatggattgctgaagggtttg |
22430798 |
T |
|
| Q |
738 |
tgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagtagattcaatcagtattga |
837 |
Q |
| |
|
||||| || | || ||| || || |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22430797 |
tgaaagaaaaaacgggaaggacattgaaagaggttgcagaaggatatttaatagagttgatccatagaagtttggtgcaagtagattcaataagtattga |
22430698 |
T |
|
| Q |
838 |
tgggaagagtaa |
849 |
Q |
| |
|
| |||||||||| |
|
|
| T |
22430697 |
t-ggaagagtaa |
22430687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 14 - 857
Target Start/End: Complemental strand, 22458839 - 22457998
Alignment:
| Q |
14 |
tcgtaaaacactttgatcgtcgtgtatggattacggtgtctcgaccatacaatacagaaaaagtgttgagggacattatgctcgagttttacaaacaaca |
113 |
Q |
| |
|
|||| |||||||||||| ||| ||||||||| | ||||||| | ||||||||| |||| || |||||||||| ||| | |||||||| ||||||| |
|
|
| T |
22458839 |
tcgttaaacactttgattgtcatgtatggatcagagtgtctcaatcatacaatatagaaggcttgctgagggacatgctgcacaagttttacgaacaaca |
22458740 |
T |
|
| Q |
114 |
aaggaaagttcctcctcagagtctccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgttt |
213 |
Q |
| |
|
| | | || || || ||| | ||||||||| ||||| ||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||| ||| |
|
|
| T |
22458739 |
aggagcaaatctcccccaaagtattcatcaaatgaatcgagagtcattggttgatgaagtgaggaactacttgcaggaaaaaaggtatgttatagttttt |
22458640 |
T |
|
| Q |
214 |
gatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatg |
313 |
Q |
| |
|
|||||||||||| | |||||||| | ||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||| |
|
|
| T |
22458639 |
gatgatgtatggagcttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatg |
22458540 |
T |
|
| Q |
314 |
ttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattcca |
413 |
Q |
| |
|
|||| ||| | ||||||||||||||||||||||||||||||||| | ||||||||| ||| | |||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
22458539 |
ttgcaaatgcatgtaagaaatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattcca |
22458440 |
T |
|
| Q |
414 |
tgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggt |
513 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||| |
|
|
| T |
22458439 |
cgacttaaacggacgttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggt |
22458340 |
T |
|
| Q |
514 |
attttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaatttttag |
613 |
Q |
| |
|
|||||| || |||||||| || | || |||||||||||||||||||||||| ||||| ||||||| | ||| ||| | |||| |||| || ||| |
|
|
| T |
22458339 |
attttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtag |
22458240 |
T |
|
| Q |
614 |
gatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactc |
713 |
Q |
| |
|
| | ||||||||||| || ||||| | |||||||||||||| ||||||||| |||||||||||||||| | || ||||| | |||| | | ||| || |
|
|
| T |
22458239 |
gtctcggttaccatgatctgtcttacaatctcaagtcatgtttgttgtatttt-ggattatatcctgaaggttgtatagttcctacaaatatactgattc |
22458141 |
T |
|
| Q |
714 |
gacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggt |
813 |
Q |
| |
|
| |||||||| |||||||| ||||||||| | || || || ||| ||||||| |||||||| |||||||||| ||| || || |||| ||||||| |
|
|
| T |
22458140 |
ggcaatggatggctgaaggatttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggt |
22458041 |
T |
|
| Q |
814 |
gcaagtagattcaatcagtattgatgggaagagtaaaacgttgt |
857 |
Q |
| |
|
|||||||| |||||| ||||||||| ||||||| |||| ||||| |
|
|
| T |
22458040 |
gcaagtagtttcaattagtattgat-ggaagagcaaaaagttgt |
22457998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 14 - 857
Target Start/End: Complemental strand, 22481820 - 22480979
Alignment:
| Q |
14 |
tcgtaaaacactttgatcgtcgtgtatggattacggtgtctcgaccatacaatacagaaaaagtgttgagggacattatgctcgagttttacaaacaaca |
113 |
Q |
| |
|
|||| |||||||||||| ||| ||||||||| | ||||||| | ||||||||| |||| || |||||||||| ||| | |||||||| ||||||| |
|
|
| T |
22481820 |
tcgttaaacactttgattgtcatgtatggatcagagtgtctcaatcatacaatatagaaggcttgctgagggacatgctgcacaagttttacgaacaaca |
22481721 |
T |
|
| Q |
114 |
aaggaaagttcctcctcagagtctccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgttt |
213 |
Q |
| |
|
| | | || || || ||| | ||||||||| ||||| ||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||| ||| |
|
|
| T |
22481720 |
aggagcaaatctcccccaaagtattcatcaaatgaatcgagagtcattggttgatgaagtgaggaactacttgcaggaaaaaaggtatgttatagttttt |
22481621 |
T |
|
| Q |
214 |
gatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatg |
313 |
Q |
| |
|
|||||||||||| | |||||||| | ||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||| |
|
|
| T |
22481620 |
gatgatgtatggagcttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatg |
22481521 |
T |
|
| Q |
314 |
ttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattcca |
413 |
Q |
| |
|
|||| ||| | ||||||||||||||||||||||||||||||||| | ||||||||| ||| | |||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
22481520 |
ttgcaaatgcatgtaagaaatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattcca |
22481421 |
T |
|
| Q |
414 |
tgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggt |
513 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||| |
|
|
| T |
22481420 |
cgacttaaacggacgttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggt |
22481321 |
T |
|
| Q |
514 |
attttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaatttttag |
613 |
Q |
| |
|
|||||| || |||||||| || | || |||||||||||||||||||||||| ||||| ||||||| | ||| ||| | |||| |||| || ||| |
|
|
| T |
22481320 |
attttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtag |
22481221 |
T |
|
| Q |
614 |
gatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactc |
713 |
Q |
| |
|
| | ||||||||||| || ||||| | |||||||||||||| ||||||||| |||||||||||||||| | || ||||| | |||| | | ||| || |
|
|
| T |
22481220 |
gtctcggttaccatgatctgtcttacaatctcaagtcatgtttgttgtatttt-ggattatatcctgaaggttgtatagttcctacaaatatactgattc |
22481122 |
T |
|
| Q |
714 |
gacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggt |
813 |
Q |
| |
|
| |||||||| |||||||| ||||||||| | || || || ||| ||||||| |||||||| |||||||||| ||| || || |||| ||||||| |
|
|
| T |
22481121 |
ggcaatggatggctgaaggatttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggt |
22481022 |
T |
|
| Q |
814 |
gcaagtagattcaatcagtattgatgggaagagtaaaacgttgt |
857 |
Q |
| |
|
|||||||| |||||| ||||||||| ||||||| |||| ||||| |
|
|
| T |
22481021 |
gcaagtagtttcaattagtattgat-ggaagagcaaaaagttgt |
22480979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 173 - 519
Target Start/End: Complemental strand, 22621105 - 22620756
Alignment:
| Q |
173 |
tgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaa |
272 |
Q |
| |
|
|||||||| |||||||| |||| ||||||||| | || ||||||||||||||| | |||||| | |||| || || || | |||||||||| || |
|
|
| T |
22621105 |
tgagaaaccacttgcaacaaaagaggtatgtttttgtatttgatgatgtatggaccatagatttttggaatgaaatagagcatgttgtgattgataataa |
22621006 |
T |
|
| Q |
273 |
aaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgact |
372 |
Q |
| |
|
||| || || |||||| || || ||||||| ||||||||||| | | |||||| |||||||||||| |||| ||| |||||||| || ||| ||| |
|
|
| T |
22621005 |
aaatgggagtaagatattgattacaacaagaagtatggatgttgctatttattgtaaaaaatcttcttttattgaggtgcatgaactacaacctttaact |
22620906 |
T |
|
| Q |
373 |
gtagaacaatcttttgagttgttcaataagaaggcattcca---tgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgtta |
469 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| ||| | |||||| ||||| |||||||| || |||| ||||||||||||||| |||||| || |
|
|
| T |
22620905 |
gaggaacaatcttttgagttgttcaataagaaggtatttcgatttgactttgatggaagttgtccaaaagatctaattgatatatcttccgaaattgcta |
22620806 |
T |
|
| Q |
470 |
aaaaatgcaaaggattaccactagcaattgtagtcattggtggtatttta |
519 |
Q |
| |
|
||||||||| || ||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
22620805 |
gaaaatgcaagggtttaccactagcaattgtagccgttggtggtctttta |
22620756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 173 - 500
Target Start/End: Complemental strand, 22657257 - 22656927
Alignment:
| Q |
173 |
tgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaa |
272 |
Q |
| |
|
||||||| |||||||| |||| ||||||||| | |||||||||||||||||| | | ||||| | |||| ||||||| |||| | |||| | || |
|
|
| T |
22657257 |
tgagaaaatacttgcagaaaaagaggtatgtttttgtgtttgatgatgtatggaacaaaagtttttgggatgagattgaatatgctgttggtgatcataa |
22657158 |
T |
|
| Q |
273 |
aaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgact |
372 |
Q |
| |
|
||| || || |||||| || || |||||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||| | ||| || |
|
|
| T |
22657157 |
aaatgggagtaagatatttattacaacaagaaatatggatgttgcggtgtattgtaagaaatcttcttttattgaagtgcatgaactacatcctttaaca |
22657058 |
T |
|
| Q |
373 |
gtagaacaatcttttgagttgttcaataagaaggcattcca---tgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgtta |
469 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| || || |||||| |||||| |||||||| || | || ||||||||||||||| |||||| || |
|
|
| T |
22657057 |
gtagaacaatcttttgagttgtttaataagaaggcctttcaatttgactttaatggatgttgtccaaaagagctcattgatatatcttccgaaattgcta |
22656958 |
T |
|
| Q |
470 |
aaaaatgcaaaggattaccactagcaattgt |
500 |
Q |
| |
|
|||||||||||| ||||| || |||||||| |
|
|
| T |
22656957 |
gaaaatgcaaaggtttaccgctggcaattgt |
22656927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 649 - 820
Target Start/End: Complemental strand, 22620599 - 22620429
Alignment:
| Q |
649 |
tcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattgctgaagggtttgtgaaacaatat |
748 |
Q |
| |
|
|||||||| ||||||||||| ||||||||| ||||| ||||||||| ||||||||| ||||| ||| |||||||| |||||||||||||| ||| || | |
|
|
| T |
22620599 |
tcatgtttattgtattttgg-attatatccagaagattataaagttgattcaaagagattgattcggcaatggatagctgaagggtttgtaaaagaagaa |
22620501 |
T |
|
| Q |
749 |
ggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagta |
820 |
Q |
| |
|
||| | || ||||||| |||||||||||||| |||| |||||| || ||||||||||||||||||||| |
|
|
| T |
22620500 |
agggggaatactttggaagaagttgcagaaggatacttaacagagttgatccatagaagtttggtgcaagta |
22620429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 725 - 857
Target Start/End: Complemental strand, 37930500 - 37930369
Alignment:
| Q |
725 |
gctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagtagatt |
824 |
Q |
| |
|
|||||||||||||||||| |||| | |||||| || ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
37930500 |
gctgaagggtttgtgaaagaatacgaggaaaggacattggaaaaggttgcggaaggatatttaaaagagttaatctgtagaagtttggtgcaagtagttt |
37930401 |
T |
|
| Q |
825 |
caatcagtattgatgggaagagtaaaacgttgt |
857 |
Q |
| |
|
||| | |||||||| |||||||||||| ||||| |
|
|
| T |
37930400 |
caaccggtattgat-ggaagagtaaaaagttgt |
37930369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 141 - 411
Target Start/End: Complemental strand, 30989528 - 30989258
Alignment:
| Q |
141 |
tcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtc-acatttttt |
239 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||| || |||||||||||||| ||| ||| |||||||| |
|
|
| T |
30989528 |
tcaaatggatcgagggtcattgactgatgaagtgagaaactacttgcggttaaaaaggtatgtcgttgtgtttgatgatgtttgg-agtgtacatttttg |
30989430 |
T |
|
| Q |
240 |
gcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttct |
339 |
Q |
| |
|
| ||||||||||||||||| | |||||||| ||||| || || |||||| ||||| ||||||||| | ||||||| | ||||||| ||||||||| |
|
|
| T |
30989429 |
ggatgatattgaatttgctgtaattgataataaaaatggaagtaagatatttatcacaacaagaaacctagatgttgtgttgtcttgtaaaaaatcttct |
30989330 |
T |
|
| Q |
340 |
tttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattc |
411 |
Q |
| |
|
| | |||||||| ||| | || ||| | || | |||||||||| |||||||||||||||||||||||| |
|
|
| T |
30989329 |
tatattgaagtgcttgagttgcaacctttaaatgaacaacaatctttggagttgttcaataagaaggcattc |
30989258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 608 - 820
Target Start/End: Complemental strand, 30989049 - 30988838
Alignment:
| Q |
608 |
ttttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacat |
707 |
Q |
| |
|
||||||| || |||||| ||||||||||||||| ||||||||||| || ||||||||| ||| ||||||| ||||| ||| ||||| | ||||||| || |
|
|
| T |
30989049 |
ttttaggcttaagttacgatgatttgccttactctctcaagtcatgcttgttgtatttt-ggaatatatccagaagattatgaagttaaatcaaagagat |
30988951 |
T |
|
| Q |
708 |
tgactcgacaatggattgctgaagggtttgtgaaaca-atatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaa |
806 |
Q |
| |
|
||| |||||||||| | ||||||||||| ||||| | | | || ||| || ||||||| ||||||||||||||||||| |||||| || ||||||| |
|
|
| T |
30988950 |
tgattcgacaatgggtagctgaagggttcgtgaaggaggaaagagggaag-actttggaagacgttgcagaaggatatttaacagagttgatccatagaa |
30988852 |
T |
|
| Q |
807 |
gtttggtgcaagta |
820 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
30988851 |
gcttggtgcaagta |
30988838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 626 - 738
Target Start/End: Original strand, 21931161 - 21931272
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||||||| |||||| |||| |||||||||||||| | ||||||| ||||| ||| ||||| | ||||||| | |||||||||||||||| | |
|
|
| T |
21931161 |
atgatttgccttactatctcaagccatgcttcttgtattttgg-agtatatccagaagattatgaagttaaatcaaagagagtgactcgacaatggatag |
21931259 |
T |
|
| Q |
726 |
ctgaagggtttgt |
738 |
Q |
| |
|
||||||||||||| |
|
|
| T |
21931260 |
ctgaagggtttgt |
21931272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 143 - 500
Target Start/End: Complemental strand, 22615489 - 22615132
Alignment:
| Q |
143 |
aaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgca |
242 |
Q |
| |
|
|||||||| || ||||||| | ||||| || |||||||||||||| |||| ||||| ||||| |||||||||||||||||| | ||||||| | | |
|
|
| T |
22615489 |
aaatggatagagggtcattaatcgatgaggtaagaaactacttgcagcaaaagaggtacgttgttgtgtttgatgatgtatggaacatgcatttttggaa |
22615390 |
T |
|
| Q |
243 |
tgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttctttt |
342 |
Q |
| |
|
||| ||||||| |||| | |||||||| ||||| || || |||||| || || ||||| || || |||||||| | ||||||||| |||||| || |
|
|
| T |
22615389 |
tgagattgaatctgctgtaattgataataaaaatggaagtaagatatttataacaacaaggaatatagatgttgcactttcttgtaagagatcttcgtta |
22615290 |
T |
|
| Q |
343 |
gttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattcca---tgacttaaatggacgttgtccagaaa |
439 |
Q |
| |
|
|| ||||| |||| | || ||| |||| |||||||||| | |||||||| |||||||||||||| || |||| ||||| |||||||| || |
|
|
| T |
22615289 |
gtcaaagtgcatgagttgcaacctttaactgaagaacaatctctggagttgtttaataagaaggcatttcaatttgac--aaatgtt-gttgtccaaaag |
22615193 |
T |
|
| Q |
440 |
atcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgt |
500 |
Q |
| |
|
| || ||||||||||||| | |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22615192 |
agctcattgatatatcttatgatattgttaaaaaatgcaaaggtttaccactagcaattgt |
22615132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 626 - 741
Target Start/End: Original strand, 22105448 - 22105562
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||| ||||| | ||||||| ||||| ||| ||||| | || |||| | |||||||||||||||| | |
|
|
| T |
22105448 |
atgatttgccttactatctcaagtcatgcttgttgtactttgg-agtatatccagaagattatgaagttaaatcgaagagagtgactcgacaatggatag |
22105546 |
T |
|
| Q |
726 |
ctgaagggtttgtgaa |
741 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
22105547 |
ctgaagggtttgtgaa |
22105562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 140 - 411
Target Start/End: Original strand, 22115327 - 22115598
Alignment:
| Q |
140 |
atcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacatttttt |
239 |
Q |
| |
|
|||||||||||||| | |||| ||||||||||||||| |||||||| |||| ||||| ||||| |||||||||||||| ||| | |||||||| |
|
|
| T |
22115327 |
atcaaatggatcgaggattattaactgatgaagtgagaaaatacttgcagaaaaagaggtacgttgtcgtgtttgatgatgtttggaatgtacatttttg |
22115426 |
T |
|
| Q |
240 |
gcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttct |
339 |
Q |
| |
|
| |||||||||||||| || | ||||||| ||||| || || |||||| || || ||||||||||||||||||| | ||||||| ||||||||| |
|
|
| T |
22115427 |
ggatgatattgaattttctgtaattgatagtaaaaatggaagtaagatatttataacaacaagaaacatggatgttgtgttgtcttgtaaaaaatcttct |
22115526 |
T |
|
| Q |
340 |
tttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattc |
411 |
Q |
| |
|
|| |||| ||| | | || || ||| ||| ||||||||| || ||||||||||||||||||||||| |
|
|
| T |
22115527 |
ttcattgaggtgctttagctgcaacctttaactcaagaacaatcattgaagttgttcaataagaaggcattc |
22115598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 626 - 741
Target Start/End: Original strand, 22115825 - 22115939
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||||||| ||| |||| || ||||| | | ||||| | ||||||| | | |||||||||||||| | |
|
|
| T |
22115825 |
atgatttgccttactatctcaagtcatgtttgttgtatttt-ggagtatacccagaagattttgaagttaaatcaaagagaatcactcgacaatggatag |
22115923 |
T |
|
| Q |
726 |
ctgaagggtttgtgaa |
741 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
22115924 |
ctgaagggtttgtgaa |
22115939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 626 - 738
Target Start/End: Original strand, 22028740 - 22028851
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||||||| |||||| |||| || ||||||||||| | ||||||| ||||| ||| ||||| | ||||||| | ||| |||||||||||| | |
|
|
| T |
22028740 |
atgatttgccttactatctcaagccatgcttgttgtattttgg-agtatatccagaagattatgaagttaaatcaaagagagtgattcgacaatggatag |
22028838 |
T |
|
| Q |
726 |
ctgaagggtttgt |
738 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22028839 |
ctgaagggtttgt |
22028851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 626 - 738
Target Start/End: Original strand, 22187728 - 22187839
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||||||| |||||| |||| || ||||||||||| | ||||||| ||||| ||| ||||| | ||||||| | ||| |||||||||||| | |
|
|
| T |
22187728 |
atgatttgccttactatctcaagccatgcttgttgtattttgg-agtatatccagaagattatgaagttaaatcaaagagagtgattcgacaatggatag |
22187826 |
T |
|
| Q |
726 |
ctgaagggtttgt |
738 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22187827 |
ctgaagggtttgt |
22187839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 168 - 411
Target Start/End: Original strand, 21930691 - 21930934
Alignment:
| Q |
168 |
tgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgat |
267 |
Q |
| |
|
|||||||||||| | |||||| |||| ||||||||||| |||||||||||||| ||| | |||||||| | ||||||||||||||||| |||||| |
|
|
| T |
21930691 |
tgaagtgagaaaatgcttgcagaaaaagaggtatgttgtcgtgtttgatgatgtttggaatgtacatttttgggatgatattgaatttgctgcaattgat |
21930790 |
T |
|
| Q |
268 |
aacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtt |
367 |
Q |
| |
|
| ||||| || || |||||| || || ||||| ||||||||||||| | ||||||| ||||||||||| ||||| || ||| | || || |
|
|
| T |
21930791 |
agtaaaaatggaagtaagatatttataacaacaaggaacatggatgttgtggtgtcttgtaaaaaatcttctttcattgaaatgcttgagttgcaacctt |
21930890 |
T |
|
| Q |
368 |
tgactgtagaacaatcttttgagttgttcaataagaaggcattc |
411 |
Q |
| |
|
| ||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21930891 |
taactcatgaacaatctttggagttgttcaataagaaggcattc |
21930934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 167 - 410
Target Start/End: Original strand, 21945893 - 21946136
Alignment:
| Q |
167 |
atgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattga |
266 |
Q |
| |
|
||||||||||||| |||||||| |||| ||||||||||| || ||||||||||| ||| |||||||| | ||||| || |||||||| ||||| |
|
|
| T |
21945893 |
atgaagtgagaaattacttgcagcaaaagaggtatgttgtcgtctttgatgatgtttggactgtacatttttgggatgattttaaatttgctgcaattga |
21945992 |
T |
|
| Q |
267 |
taacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggt |
366 |
Q |
| |
|
|| ||||| || ||||||||| || || ||||| |||| | |||||| |||| ||||||| ||||||||||| ||| ||| ||| || || || |
|
|
| T |
21945993 |
tagtaaaaatggaagtaggatatttataacaacaaggaacaagaatgttgtgaattcttgtaaaaaatcttctttcactgagatgtttgagctgcaatgt |
21946092 |
T |
|
| Q |
367 |
ttgactgtagaacaatcttttgagttgttcaataagaaggcatt |
410 |
Q |
| |
|
|| ||| |||||||||||| |||||||| |||||||||||||| |
|
|
| T |
21946093 |
ttaactcaagaacaatctttggagttgtttaataagaaggcatt |
21946136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 626 - 741
Target Start/End: Original strand, 22035257 - 22035371
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||||||| |||||| |||| || ||||||||||| | ||||||| ||||| | | ||||| | ||||||| | |||||||||||||||| | |
|
|
| T |
22035257 |
atgatttgccttactatctcaagccatgcttgttgtattttgg-agtatatccagaagattttgaagttaaatcaaagagagtgactcgacaatggatag |
22035355 |
T |
|
| Q |
726 |
ctgaagggtttgtgaa |
741 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
22035356 |
ctgaagggtttatgaa |
22035371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 626 - 741
Target Start/End: Original strand, 22053446 - 22053560
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||||||| ||| ||||||| || ||||||||||| | ||||||| ||||| ||| ||||| |||||||| | ||| |||||||||||| | |
|
|
| T |
22053446 |
atgatttgccttactatctcgagtcatgcttgttgtattttgg-agtatatccagaagattatgaagttaattcaaagcgagtgattcgacaatggatag |
22053544 |
T |
|
| Q |
726 |
ctgaagggtttgtgaa |
741 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
22053545 |
cagaagggtttgtgaa |
22053560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 626 - 741
Target Start/End: Original strand, 22180157 - 22180271
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||||||| ||| ||||||| || || ||| ||||| | || |||| | | |||||| ||||||| | |
|
|
| T |
22180157 |
atgatttgccttactatctcaagtcatgtttgttgtatttt-ggagtatatccagaggattatgaagttaaatcgaagagagtaactcgaaaatggatag |
22180255 |
T |
|
| Q |
726 |
ctgaagggtttgtgaa |
741 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
22180256 |
ctgaagggtttgtgaa |
22180271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 103 - 275
Target Start/End: Complemental strand, 18967248 - 18967076
Alignment:
| Q |
103 |
tacaaacaacaaaggaaagt-tcctcctcagagtctccatcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtat |
201 |
Q |
| |
|
||||||||| ||||||||| ||| ||||||||| | |||||||||||||| ||||||| |||||||| ||||||||||| | || || |||||| |
|
|
| T |
18967248 |
tacaaacaa-aaaggaaaggatccccctcagagtatttatcaaatggatcgagagtcattgacagatgaagtaagaaactacttacgggataagaggtat |
18967150 |
T |
|
| Q |
202 |
gttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaa |
275 |
Q |
| |
|
||||| |||||||||||||| ||| | |||||||| | ||||||||||||||| | | |||||||| ||||| |
|
|
| T |
18967149 |
gttgttgtgtttgatgatgtttggagtttacatttttgggatgatattgaatttgttgtaattgataataaaaa |
18967076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 626 - 795
Target Start/End: Complemental strand, 22656792 - 22656624
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||| || || ||||||||||| ||||||||| ||| ||||||| ||||| ||| ||||| | ||||||| | ||| || |||||||| | |
|
|
| T |
22656792 |
atgatttgcctttttatcttaagtcatgtttgttgtatttt-ggaatatatccagaagattatgaagttgaatcaaagagagtgatacggcaatggatag |
22656694 |
T |
|
| Q |
726 |
ctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagtt |
795 |
Q |
| |
|
||||||| ||||||||| || | ||| | ||| ||||||| ||||||||||||||||||| |||||| |
|
|
| T |
22656693 |
ctgaaggttttgtgaaagaagaaagggggaaaactttggaagaagttgcagaaggatatttaacagagtt |
22656624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 626 - 741
Target Start/End: Original strand, 21946364 - 21946478
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||| ||| ||||||||||| || || |||||||| | ||||||| ||||| ||| ||||| | || |||| | ||| |||||||||||| | |
|
|
| T |
21946364 |
atgatttgccttgctatctcaagtcatgcttgttttattttgg-agtatatccagaagattatgaagttaaatcgaagagagtgattcgacaatggatag |
21946462 |
T |
|
| Q |
726 |
ctgaagggtttgtgaa |
741 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
21946463 |
ctgaagggtttgtgaa |
21946478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 260 - 513
Target Start/End: Complemental strand, 22648288 - 22648032
Alignment:
| Q |
260 |
tgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcga-atacttgtaagaaatcttcttttgttgaagtgtatgaac |
358 |
Q |
| |
|
|||||||||| ||||| || || |||||| || || |||||||| ||||||||||| | ||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
22648288 |
tgattgataataaaaatgggagtaagatatttattacaacaagaaatatggatgttgccatata-ttgtaagaaatcttctttcattgaagtgtatgaat |
22648190 |
T |
|
| Q |
359 |
taaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattcca---tgacttaaatggacgttgtccagaaaatcttattgatatatc |
455 |
Q |
| |
|
| || ||| || ||||||||||||||||||||||| |||||| |||| || |||| |||||| |||||||| || | || ||||||||||| |
|
|
| T |
22648189 |
tgcaacctttaacaaatgaacaatcttttgagttgttcaacaagaagacatttcagtttgacaacaatggatgttgtccaaaagaactcattgatatatc |
22648090 |
T |
|
| Q |
456 |
ttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggt |
513 |
Q |
| |
|
|| ||||| || ||||||||| || ||||| || |||||||| | |||||||||| |
|
|
| T |
22648089 |
ttttgaaatttctagaaaatgcaagggtttaccgctggcaattgttgccattggtggt |
22648032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 411
Target Start/End: Original strand, 21937396 - 21937666
Alignment:
| Q |
141 |
tcaaatggatcgacagtcattagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtc-acatttttt |
239 |
Q |
| |
|
||||||||||||| |||||| | |||||| | ||||||||||||| | ||| ||||| ||| | |||||||||||||| ||| |||| |||||||| |
|
|
| T |
21937396 |
tcaaatggatcgagggtcattgatggatgaaattagaaactacttgcgaagaaagaggtacgttatcgtgtttgatgatgtttgg-agtctacatttttg |
21937494 |
T |
|
| Q |
240 |
gcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttct |
339 |
Q |
| |
|
| ||||||| ||||||||| ||||||| ||||| || ||||||||| || || ||||| | || ||||||| | ||||||| ||||||||| |
|
|
| T |
21937495 |
ggatgatatcgaatttgctggaattgatagtaaaaatggaagtaggatatttataacaacaaggataattgatgttgtggtgtcttgtaaaaaatcttct |
21937594 |
T |
|
| Q |
340 |
tttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattc |
411 |
Q |
| |
|
|| ||||||| ||| | || |||| ||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21937595 |
ttcattgaagttcttgagttgcaatgtttaactcatgaacaatctttggagttgttcaataagaaggcattc |
21937666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 411
Target Start/End: Original strand, 22187464 - 22187501
Alignment:
| Q |
374 |
tagaacaatcttttgagttgttcaataagaaggcattc |
411 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22187464 |
tagaacaatctttggagttgttcaataagaaggcattc |
22187501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 716 - 776
Target Start/End: Original strand, 37929530 - 37929590
Alignment:
| Q |
716 |
caatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcag |
776 |
Q |
| |
|
|||||||| |||||||||||||||||| |||| |||||||| || ||||| ||||||||| |
|
|
| T |
37929530 |
caatggatagctgaagggtttgtgaaagaatacggggaaaggacattggaaaaggttgcag |
37929590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 741
Target Start/End: Original strand, 21937893 - 21938007
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||||||| ||| ||||||| ||||| | | || || |||||| | | | |||||||||||| | |
|
|
| T |
21937893 |
atgatttgccttactatctcaagtcatgcttgttgtatttt-ggagtatatccagaagattttgaaattagaccaaagagagtcattcgacaatggatag |
21937991 |
T |
|
| Q |
726 |
ctgaagggtttgtgaa |
741 |
Q |
| |
|
||||||| |||||||| |
|
|
| T |
21937992 |
ctgaaggatttgtgaa |
21938007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 762 - 820
Target Start/End: Complemental strand, 22647775 - 22647717
Alignment:
| Q |
762 |
tggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagta |
820 |
Q |
| |
|
||||||| ||||||||| ||||||||| ||||| || |||||||||||||| |||||| |
|
|
| T |
22647775 |
tggaagaagttgcagaacgatatttaactgagttgatccatagaagtttggttcaagta |
22647717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 258
Target Start/End: Original strand, 22053000 - 22053093
Alignment:
| Q |
165 |
tgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgct |
258 |
Q |
| |
|
||||||||||||||| ||| |||| |||| |||| |||| || ||||||||||| ||| | |||||||| ||||||||||||||||||| |
|
|
| T |
22053000 |
tgatgaagtgagaaattacctgcagaaaaagaggttcattgttgtatttgatgatgtttggaatgaacatttttggcatgatattgaatttgct |
22053093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 61; Significance: 1e-25; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 173 - 500
Target Start/End: Original strand, 34989492 - 34989822
Alignment:
| Q |
173 |
tgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaa |
272 |
Q |
| |
|
||||||| |||||||| |||| ||||||||| | |||||||||||||||||| | || ||||| | |||| ||||||| || | ||| |||||| || |
|
|
| T |
34989492 |
tgagaaagtacttgcagaaaaagaggtatgtttttgtgtttgatgatgtatggaacacaagtttttgggatgagattgaatatgttgtgagtgataataa |
34989591 |
T |
|
| Q |
273 |
aaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgact |
372 |
Q |
| |
|
||| ||| || |||||| || || |||||||| | ||||||||| | ||||||||||||||| ||| |||||||| |||||||| || || ||| |
|
|
| T |
34989592 |
aaatggtagtaagatatttattaccacaagaaataaggatgttgccatgtattgtaagaaatcttcatttattgaagtgcatgaactacaaccattaact |
34989691 |
T |
|
| Q |
373 |
gtagaacaatcttttgagttgttcaataagaaggcattcca---tgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgtta |
469 |
Q |
| |
|
| ||||||||| |||| |||||||||||||||||||| || |||||| | ||| |||||||| || | || ||||||||| ||| |||||| || |
|
|
| T |
34989692 |
gaagaacaatcaattgatttgttcaataagaaggcatttcaatttgacttggaaggatgttgtccaaaagagctcattgatatagcttttgaaattgcta |
34989791 |
T |
|
| Q |
470 |
aaaaatgcaaaggattaccactagcaattgt |
500 |
Q |
| |
|
|| ||||| || ||||||||||||||||| |
|
|
| T |
34989792 |
ggaagtgcaagggcttaccactagcaattgt |
34989822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 173 - 519
Target Start/End: Complemental strand, 2305676 - 2305327
Alignment:
| Q |
173 |
tgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaa |
272 |
Q |
| |
|
||||||| |||||||| | || ||||||||| | ||||||||| |||||||| | || ||||| | |||| ||||||| |||||||| |||| | || |
|
|
| T |
2305676 |
tgagaaagtacttgcagaataagaggtatgtttttgtgtttgataatgtatggaacacaagtttttgggatgagattgaatatgctatgagtgatcataa |
2305577 |
T |
|
| Q |
273 |
aaagggttctaggatattaatcactacaagaaacatggatgttgcga-atacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgac |
371 |
Q |
| |
|
||| ||| || |||||| || || |||||||| ||||||||||| | ||| ||||||||||||||||||| || ||||| |||||||| || ||| || |
|
|
| T |
2305576 |
aaatggtagtaagatatttattaccacaagaaatatggatgttgccatata-ttgtaagaaatcttcttttattcaagtgcatgaactacaacttttaac |
2305478 |
T |
|
| Q |
372 |
tgtagaacaatcttttgagttgttcaataagaaggcattcca---tgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgtt |
468 |
Q |
| |
|
|| ||| ||| ||||| ||||| |||||||||||||| || |||||| | ||| |||||||| || | || ||||||||||||| |||| | | |
|
|
| T |
2305477 |
tgaggaaaaataatttgatttgtttaataagaaggcatttcaatttgactttgaaggatgttgtccaaaagagctcattgatatatcttttgaaatcgct |
2305378 |
T |
|
| Q |
469 |
aaaaaatgcaaaggattaccactagcaattgtagtcattggtggtatttta |
519 |
Q |
| |
|
| || ||||| || ||||| |||||||||||| ||||||||| ||||| |
|
|
| T |
2305377 |
aggaagtgcaagggcttacccctagcaattgtaactattggtggtctttta |
2305327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 820
Target Start/End: Original strand, 34989957 - 34990150
Alignment:
| Q |
626 |
atgatttgccttactacctcaagtcatgtttcttgtattttgggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattg |
725 |
Q |
| |
|
|||||||||||| || || || |||||||| || |||||||| || ||||| ||||| ||| ||||| | ||||||| | ||| | ||||||||| | |
|
|
| T |
34989957 |
atgatttgcctttttatcttaaatcatgtttgttatattttggaatg-tatccagaagattatgaagttaaatcaaagagaatgatacaacaatggatag |
34990055 |
T |
|
| Q |
726 |
ctgaagggtttgtgaaacaatatgg-ggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagta |
820 |
Q |
| |
|
||||||||||||||||| | | | || |||| | ||||||| |||| |||| ||||||||| |||||| || | ||||||||||||||||||| |
|
|
| T |
34990056 |
ctgaagggtttgtgaaagaggaaagtgggaaga-ctttggaagaagttgaagaaagatatttaacagagttgattcgtagaagtttggtgcaagta |
34990150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 762 - 820
Target Start/End: Complemental strand, 2305077 - 2305019
Alignment:
| Q |
762 |
tggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagta |
820 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| || | | ||||||||||||||||| |
|
|
| T |
2305077 |
tggaagaagttgcagaaggatatttatcagagttgattcgtcgaagtttggtgcaagta |
2305019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 762 - 820
Target Start/End: Original strand, 34976246 - 34976304
Alignment:
| Q |
762 |
tggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagta |
820 |
Q |
| |
|
||||||| |||||| |||||||||||| |||||| || | | ||||||||||||||||| |
|
|
| T |
34976246 |
tggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagta |
34976304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 762 - 820
Target Start/End: Original strand, 34983357 - 34983415
Alignment:
| Q |
762 |
tggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagta |
820 |
Q |
| |
|
||||||| |||||| |||||||||||| |||||| || | | ||||||||||||||||| |
|
|
| T |
34983357 |
tggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagta |
34983415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1439 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1439
Description:
Target: scaffold1439; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 324 - 410
Target Start/End: Complemental strand, 1633 - 1547
Alignment:
| Q |
324 |
ttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcatt |
410 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||| || ||| |||| |||| |||| ||||| ||||| |||||||||||||| |
|
|
| T |
1633 |
ttgtaagaaatcttcttttattgaagtgcatgaactacaacctttaactgaagaaaaatcatttgatttgtttaataagaaggcatt |
1547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 29610771 - 29610706
Alignment:
| Q |
160 |
ttagttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgg |
225 |
Q |
| |
|
||||| |||||||||||||| |||||||| || |||||||| ||||||||||||| ||||||||| |
|
|
| T |
29610771 |
ttagtcgatgaagtgagaaattacttgcaggagaaaaggtaccttgtagtgtttgacgatgtatgg |
29610706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 247 - 410
Target Start/End: Original strand, 40580337 - 40580500
Alignment:
| Q |
247 |
attgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgc-gaatacttgtaagaaatcttcttttgtt |
345 |
Q |
| |
|
||||||| |||||||| |||||| ||||| ||| || |||||| || || |||||| ||||||||||| | || ||||||||||| ||||||| || |
|
|
| T |
40580337 |
attgaatatgctatgagtgataataaaaatggtagtaagatatttattacctcaagaagtatggatgttgcagtgta-ttgtaagaaattttcttttatt |
40580435 |
T |
|
| Q |
346 |
gaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcatt |
410 |
Q |
| |
|
|||||| |||||||| || ||| || | |||| |||| ||||| |||||||| ||||||||||| |
|
|
| T |
40580436 |
gaagtgcatgaactacaacctttaacagaagaaaaatcatttgatttgttcaacaagaaggcatt |
40580500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University