View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5463_high_8 (Length: 359)
Name: NF5463_high_8
Description: NF5463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5463_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 19 - 340
Target Start/End: Complemental strand, 32305039 - 32304717
Alignment:
| Q |
19 |
cagagactcttataatgtttttgacttttagtgggatctgaaatgatccaagactcttttagtgtaacaatgacgtgtaaggcctatctgtttggtttac |
118 |
Q |
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| T |
32305039 |
cagagactcttataatgtttttgacttttagtgggatctgaaatgatccaagactcttttagtgtaacaatgacgtgtaaggcctatctgtttggtttac |
32304940 |
T |
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| Q |
119 |
gatatatgggcgcccactagccggtctcgtggaactttgacctccatatttgtccttgacataaatgaagcacgagttctgtttaaaggcgaagtatttt |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
32304939 |
gatatatgggcgcccactagccggtctcgtggaactttgacctccatatttgtccttgacataaacgaagcacgagttctgtttaaaggcgaagtatttt |
32304840 |
T |
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| Q |
219 |
taa-ggatatgatgatccacaacctcccaaacaaagacgaaatagttttaagagtatacatcggttcacaacccactaagcacgaatgcttcttgaaagg |
317 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |
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| T |
32304839 |
taagggatatgatgatccacaacctcccaaacaaagacgaaatagttttaagagtatacatcggtccacaacccactaagcacgaatgcttcttaaaagg |
32304740 |
T |
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| Q |
318 |
aaaggtggtttttaagagtatat |
340 |
Q |
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||||||||||||||||||||||| |
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| T |
32304739 |
aaaggtggtttttaagagtatat |
32304717 |
T |
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