View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5463_low_2 (Length: 651)

Name: NF5463_low_2
Description: NF5463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5463_low_2
NF5463_low_2
[»] chr8 (23 HSPs)
chr8 (17-265)||(5253128-5253376)
chr8 (462-651)||(5252712-5252901)
chr8 (19-210)||(31284815-31285005)
chr8 (330-454)||(5252927-5253051)
chr8 (19-210)||(44026879-44027071)
chr8 (20-199)||(8911799-8911979)
chr8 (19-210)||(33419797-33419987)
chr8 (22-203)||(21279558-21279740)
chr8 (19-205)||(2560699-2560886)
chr8 (19-210)||(23619154-23619342)
chr8 (19-210)||(17931122-17931316)
chr8 (19-145)||(10498039-10498166)
chr8 (26-205)||(13197003-13197183)
chr8 (19-110)||(23612379-23612470)
chr8 (19-204)||(12516235-12516424)
chr8 (26-112)||(30785164-30785252)
chr8 (19-54)||(16954069-16954104)
chr8 (19-54)||(18824186-18824221)
chr8 (19-54)||(18825679-18825714)
chr8 (176-210)||(10498158-10498192)
chr8 (20-54)||(10664245-10664279)
chr8 (20-54)||(23597501-23597535)
chr8 (20-49)||(5584224-5584253)
[»] chr7 (21 HSPs)
chr7 (19-209)||(20080509-20080700)
chr7 (19-205)||(14683233-14683422)
chr7 (19-210)||(10469275-10469467)
chr7 (19-210)||(3067768-3067960)
chr7 (19-210)||(37165940-37166130)
chr7 (24-205)||(13842776-13842956)
chr7 (19-207)||(9132554-9132741)
chr7 (19-210)||(26135922-26136111)
chr7 (143-210)||(10345326-10345393)
chr7 (59-210)||(26144341-26144491)
chr7 (492-596)||(22079171-22079275)
chr7 (17-95)||(20595933-20596011)
chr7 (150-195)||(22611635-22611680)
chr7 (19-62)||(16166024-16166067)
chr7 (519-558)||(4959826-4959865)
chr7 (19-54)||(6603741-6603776)
chr7 (19-54)||(8277280-8277315)
chr7 (19-54)||(13449575-13449610)
chr7 (20-54)||(4543090-4543124)
chr7 (20-54)||(37415218-37415252)
chr7 (20-49)||(45286864-45286893)
[»] chr2 (25 HSPs)
chr2 (17-210)||(3875413-3875607)
chr2 (19-210)||(12219922-12220114)
chr2 (19-201)||(16179274-16179461)
chr2 (19-210)||(37937009-37937198)
chr2 (19-210)||(22630967-22631160)
chr2 (19-210)||(40258928-40259118)
chr2 (17-210)||(17877232-17877427)
chr2 (19-210)||(16790547-16790736)
chr2 (19-155)||(23205351-23205488)
chr2 (19-155)||(23676955-23677092)
chr2 (19-210)||(1386214-1386401)
chr2 (97-205)||(9966233-9966343)
chr2 (20-54)||(29440773-29440807)
chr2 (544-593)||(2467640-2467689)
chr2 (19-54)||(9188444-9188479)
chr2 (19-54)||(33310944-33310979)
chr2 (20-54)||(8888914-8888948)
chr2 (19-49)||(10601136-10601166)
chr2 (20-54)||(24235378-24235412)
chr2 (20-54)||(24238650-24238684)
chr2 (20-54)||(25959482-25959516)
chr2 (20-62)||(42368492-42368534)
chr2 (20-54)||(45499151-45499185)
chr2 (20-49)||(25871067-25871096)
chr2 (20-49)||(30274561-30274590)
[»] chr5 (24 HSPs)
chr5 (19-205)||(17664700-17664887)
chr5 (19-210)||(23044286-23044477)
chr5 (19-210)||(26292934-26293125)
chr5 (19-185)||(26907204-26907372)
chr5 (25-210)||(17748584-17748767)
chr5 (19-180)||(22131405-22131566)
chr5 (19-155)||(11958980-11959117)
chr5 (19-210)||(12088102-12088291)
chr5 (20-210)||(12058282-12058470)
chr5 (468-651)||(28455872-28456056)
chr5 (19-210)||(34132772-34132961)
chr5 (19-210)||(34143003-34143192)
chr5 (19-205)||(18952842-18953032)
chr5 (19-118)||(35049772-35049872)
chr5 (133-205)||(20055923-20055996)
chr5 (98-205)||(26895468-26895577)
chr5 (20-57)||(43492050-43492087)
chr5 (19-54)||(14015930-14015965)
chr5 (20-54)||(22936732-22936766)
chr5 (20-54)||(41306318-41306352)
chr5 (20-54)||(41876546-41876580)
chr5 (20-54)||(42063226-42063260)
chr5 (493-582)||(35122147-35122236)
chr5 (20-48)||(26752493-26752521)
[»] chr4 (21 HSPs)
chr4 (19-210)||(53009345-53009536)
chr4 (19-210)||(30392712-30392904)
chr4 (19-210)||(25962202-25962391)
chr4 (26-210)||(46955273-46955456)
chr4 (17-210)||(21419932-21420123)
chr4 (19-210)||(40493156-40493345)
chr4 (19-210)||(11195819-11196005)
chr4 (19-210)||(29544660-29544852)
chr4 (19-210)||(18672871-18673060)
chr4 (97-210)||(35510135-35510245)
chr4 (17-157)||(15164392-15164532)
chr4 (519-632)||(16698834-16698947)
chr4 (20-54)||(18911802-18911836)
chr4 (19-54)||(29325119-29325154)
chr4 (19-54)||(40616597-40616632)
chr4 (19-54)||(52530724-52530759)
chr4 (20-54)||(34319709-34319743)
chr4 (20-54)||(40902865-40902899)
chr4 (20-54)||(44808747-44808781)
chr4 (20-54)||(48637803-48637837)
chr4 (20-49)||(34017575-34017604)
[»] chr3 (41 HSPs)
chr3 (19-210)||(17531431-17531621)
chr3 (19-201)||(34983564-34983747)
chr3 (17-210)||(37408910-37409104)
chr3 (19-210)||(17528536-17528726)
chr3 (19-210)||(54720200-54720393)
chr3 (19-210)||(25442636-25442824)
chr3 (20-210)||(52990929-52991118)
chr3 (19-208)||(48063814-48063998)
chr3 (59-210)||(17141637-17141789)
chr3 (19-209)||(32366906-32367094)
chr3 (19-198)||(25486374-25486557)
chr3 (24-170)||(35751710-35751856)
chr3 (19-210)||(22416612-22416799)
chr3 (19-205)||(17039792-17039982)
chr3 (19-121)||(46885230-46885333)
chr3 (19-179)||(15195119-15195280)
chr3 (26-205)||(27092128-27092311)
chr3 (22-210)||(12561004-12561199)
chr3 (493-606)||(29807574-29807687)
chr3 (522-638)||(25050415-25050531)
chr3 (19-102)||(11785110-11785194)
chr3 (143-210)||(46885169-46885236)
chr3 (143-210)||(28007968-28008036)
chr3 (20-62)||(11190900-11190942)
chr3 (20-54)||(16184461-16184495)
chr3 (20-76)||(2873925-2873980)
chr3 (19-54)||(50461327-50461362)
chr3 (20-54)||(539208-539242)
chr3 (20-62)||(2775868-2775910)
chr3 (20-62)||(2779110-2779152)
chr3 (20-54)||(6922902-6922936)
chr3 (20-62)||(7486945-7486987)
chr3 (20-54)||(10106378-10106412)
chr3 (20-54)||(24125881-24125915)
chr3 (20-54)||(30691117-30691151)
chr3 (20-54)||(35412887-35412921)
chr3 (20-49)||(8461272-8461301)
chr3 (20-49)||(24129163-24129192)
chr3 (516-593)||(28624371-28624448)
chr3 (550-602)||(16179614-16179666)
chr3 (22-54)||(28266300-28266332)
[»] chr6 (22 HSPs)
chr6 (19-204)||(19476154-19476338)
chr6 (21-210)||(4512622-4512811)
chr6 (19-210)||(24400325-24400515)
chr6 (19-210)||(24410444-24410634)
chr6 (19-210)||(24155154-24155344)
chr6 (19-210)||(26896045-26896237)
chr6 (19-210)||(18855814-18856003)
chr6 (19-205)||(32109819-32110007)
chr6 (19-210)||(13947164-13947349)
chr6 (19-210)||(7128445-7128634)
chr6 (19-210)||(28230741-28230931)
chr6 (17-203)||(11125480-11125668)
chr6 (107-205)||(22561037-22561136)
chr6 (20-62)||(5737854-5737896)
chr6 (514-647)||(10747858-10747990)
chr6 (20-56)||(3596571-3596607)
chr6 (19-54)||(2379528-2379563)
chr6 (20-54)||(9954260-9954294)
chr6 (20-62)||(11729122-11729164)
chr6 (20-62)||(30655747-30655789)
chr6 (20-49)||(1125527-1125556)
chr6 (519-560)||(34702338-34702379)
[»] chr1 (14 HSPs)
chr1 (19-210)||(27354729-27354922)
chr1 (17-208)||(905469-905661)
chr1 (24-205)||(672861-673043)
chr1 (164-210)||(29643150-29643199)
chr1 (20-62)||(20448122-20448164)
chr1 (20-62)||(20533889-20533931)
chr1 (19-54)||(45960536-45960571)
chr1 (20-54)||(1950238-1950272)
chr1 (20-54)||(2794525-2794559)
chr1 (20-62)||(20399143-20399185)
chr1 (20-54)||(28111354-28111388)
chr1 (24-62)||(33898621-33898659)
chr1 (20-49)||(23021712-23021741)
chr1 (20-49)||(27536323-27536352)
[»] scaffold0035 (1 HSPs)
scaffold0035 (19-210)||(64003-64195)
[»] scaffold0065 (3 HSPs)
scaffold0065 (19-210)||(58468-58659)
scaffold0065 (133-207)||(58321-58395)
scaffold0065 (19-59)||(58418-58458)
[»] scaffold0191 (1 HSPs)
scaffold0191 (19-199)||(4069-4250)
[»] scaffold0218 (1 HSPs)
scaffold0218 (19-206)||(10557-10741)
[»] scaffold0048 (1 HSPs)
scaffold0048 (19-210)||(15556-15745)
[»] scaffold0084 (2 HSPs)
scaffold0084 (24-210)||(19424-19609)
scaffold0084 (24-210)||(29509-29688)
[»] scaffold0807 (1 HSPs)
scaffold0807 (19-210)||(1860-2051)
[»] scaffold0038 (1 HSPs)
scaffold0038 (19-210)||(31239-31428)
[»] scaffold0126 (1 HSPs)
scaffold0126 (24-205)||(14112-14292)
[»] scaffold0066 (1 HSPs)
scaffold0066 (97-205)||(57453-57562)
[»] scaffold0056 (1 HSPs)
scaffold0056 (19-210)||(65110-65301)
[»] scaffold0321 (1 HSPs)
scaffold0321 (114-201)||(2854-2942)
[»] scaffold1208 (1 HSPs)
scaffold1208 (20-62)||(472-514)
[»] scaffold0250 (1 HSPs)
scaffold0250 (19-54)||(19693-19728)
[»] scaffold0962 (1 HSPs)
scaffold0962 (20-54)||(3073-3107)


Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-104; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 17 - 265
Target Start/End: Complemental strand, 5253376 - 5253128
Alignment:
Q  17 atcaaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaagttattt 116  Q
    ||||||| ||||||||||||||||||||||||| ||||||| | |||||||||| | ||||||||||||||| ||||||||| |||||||||||||||||    
T  5253376 atcaaattctatcgaagtagtaaaaatatcgttcccacaaggattgattttaatttcaataattcaattacgttgtaaaatatgatgtataaagttattt 5253277  T
Q  117 tgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttagtggtat 216  Q
    ||||||||||||||  ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5253276 tgttttgctactaaacagtagattggtttgtttgcataaaagtaaagacagaaaataaagattggttttaagaataagagagagatgagtttagtggtat 5253177  T
Q  217 gagtcataatgttttaatacctcatgtaaatcttgacaaaatcatgaag 265  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  5253176 gagtcataatgttttaatatctcatgtagatcttgacaaaatcatgaag 5253128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 462 - 651
Target Start/End: Complemental strand, 5252901 - 5252712
Alignment:
Q  462 gtttctcataatgagccttcaacacattatacacaatccgtctttataaactaacatcctccaacaccatttatttagtaatgacaagttaaactccctc 561  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||    
T  5252901 gtttctcataatgagccttcaacacattatacacaacccgtctttataaactaacatcctccaataccatttatctaataatgacaagttaaactccctc 5252802  T
Q  562 aaccttctaacacctaacccttcatcctccttactctgacaaacagaatcttaattcacccaagatattttgctaaaattctcacatccc 651  Q
    ||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5252801 aaccttctaacacctaaccattcatcctccttactccgacatacagaatcttaattcacccaagatattttgctaaaattctcacatccc 5252712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 31285005 - 31284815
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||| ||||||||||||| ||| ||||    
T  31285005 caaatactatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaaattaggatgtataaaggttctttt 31284906  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      ||||| |||| |||||||||||||||||||||||  ||  ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  31284905 aatttgccactaggtagttgattggtttgtttgcat--aagcaataacagaaaataaagattggttttaagaataagagagagatgagtttag 31284815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 330 - 454
Target Start/End: Complemental strand, 5253051 - 5252927
Alignment:
Q  330 catgataggatcaattaactcaattattgagttagcggtatttatcacaaagtgaatttaactttggggtcaaattatttattacagtagttattagtca 429  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  5253051 catgataggatcaattaacttaattattgagttagcggtatttatcacaaagtgaatttaactttggggtcaaattttttattacagtagttattagtta 5252952  T
Q  430 cattccaccaagctgaacctagcct 454  Q
    |||||||||||||||||||||||||    
T  5252951 cattccaccaagctgaacctagcct 5252927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 44026879 - 44027071
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||  |||||||||| |||||| ||||    
T  44026879 caaatactatcgaagtagtaaaaatatcgttcccacaaggactgattttaatctcaataattcaattacgttgtaagttaggatgtataaaagttctttt 44026978  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| ||||   | |||||||||||| |||||||||| |||  ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  44026979 gatttgccactagacatttgattggtttgattgcataaaattaataacagaaattaaagattggttttaagaataagagagaaatgagtttag 44027071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 199
Target Start/End: Complemental strand, 8911979 - 8911799
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttattttg 118  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||  |||||||||| |||||| |||||    
T  8911979 aaatactatcgaagtagtaaaaatatcgttcccacaaggactgattttaatctcaataattcaattacgttgtaagttaggatgtataaaagttcttttg 8911880  T
Q  119 ttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagaga 199  Q
     ||||| |||| | |||||||||||||| |||||||||| ||| || ||||  | |||||| |||||||||||||||||||    
T  8911879 atttgccactaggcagttgattggtttggttgcataaaagtaatgatagaatttgaagattagttttaagaataagagaga 8911799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 33419987 - 33419797
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  |||||||||||||| |||||  |||||||||| |||||||||||    
T  33419987 caaatactatcgaagtagtaaaaatattgtttccacaaggactgattttaatctccataattcaattacgttgtaagttaggatgtataaaagttatttt 33419888  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    |   ||| |||| | ||||||||| |||| |||||||||| ||| |||| ||| ||||| ||||||||||||| |||||||||||||||||||    
T  33419887 g-aatgccactaggcagttgattgttttgattgcataaaagtaacgacataaagtaaag-ttggttttaagaagaagagagagatgagtttag 33419797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 21279558 - 21279740
Alignment:
Q  22 atactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttattttgtt 120  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||| |||||| |||| | | ||||||||||| |||| ||||||||  |    
T  21279558 atactatcgaagtagtaaaaatatcgttcccacaaggactgtttttaatctcaattattcaactacgttattaaataggatgtgtaaaagttatttttat 21279657  T
Q  121 ttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatg 203  Q
    |||| |||| | ||| |||||||| | |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  21279658 ttgccactaggcagtagattggttggattgcataaaaataacgacagaaaataaagattggttttaagaatgagagagagatg 21279740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 2560886 - 2560699
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| | | ||| |||||||||||| ||| ||||    
T  2560886 caaatactatcgaagtagtaaaaatatcgttcccacaagaactggttttaatctcaataattcaattacgttattaaaaaggatgtataaaggttctttt 2560787  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgag 205  Q
      ||||| |||| ||||| ||||| |||| |||||||||| ||||||  |||  ||||| | | |||||||||||||||||| |||||    
T  2560786 aatttgccactaggtagtagattgatttgattgcataaaagtaaagattgaatttaaagttggtttttaagaataagagagaaatgag 2560699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 23619154 - 23619342
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||| ||||||||| ||||||||||||||| |||||  || ||||||| |||||| ||||    
T  23619154 caaatactatcgaagtagtaaaaatattgtt-ccacaaggactggttttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttt 23619252  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||||  ||| | ||||||||| |||||||||||  ||  ||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  23619253 aatttgccgctaggcagttgattgatttgtttgcat--aagcaataacagaaaataaagattgg-tttaagaataagagagagatgagtttag 23619342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 17931316 - 17931122
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa--gttattt 116  Q
    |||| |||||||||||||||||||||| ||| ||||||| |||| ||||||||  || ||||  | |||| | | || ||||||||| |||  || ||||    
T  17931316 caaaaactatcgaagtagtaaaaatattgttcccacaaggactgtttttaatcgcaacaattttagtacgttattaattaggatgtaaaaaaggtcattt 17931217  T
Q  117 tgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtttt-aagaataagagagagatgagtttag 210  Q
    || ||||| |||| | |||||||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  17931216 tgatttgccactaggcagttgattggtttgattgcataaaaataatgacagaaaataaagattggttttaaagaacaagagagagatgagattag 17931122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 10498039 - 10498166
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| |||| || |||  ||||||||| ||||||||||||||| |||||  |||||||||| |||||| ||||    
T  10498039 caaatactatcgaagtagtaaaaatatcgttcccacgaggactcgttttaatctcaataattcaattacgttgtaacttaggatgtataaaagttctttt 10498138  T
Q  118 gttttgctactaagtagttgattggttt 145  Q
      |||||| ||| | |||||||||||||    
T  10498139 aatttgctgctaggcagttgattggttt 10498166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 26 - 205
Target Start/End: Complemental strand, 13197183 - 13197003
Alignment:
Q  26 tatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag-ttattttgttttgc 124  Q
    |||||||||||||||| ||||||| |||| |  |||| ||||||||| || ||||| | |||| | | ||||||||| ||||||| |||||||| |||||    
T  13197183 tatcgaagtagtaaaa-tatcgttcccacgaagactgcttttaatctcaacaattctagtacgttattaaataggatatataaaggttattttgatttgc 13197085  T
Q  125 tactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtt-ttaagaataagagagagatgag 205  Q
     |||| | |||||||| ||||| || ||||||| |||  || ||||||||||||||||| | |||||||||||| |||||||    
T  13197084 cactaggcagttgatttgtttgattccataaaagtaacaactgaaaataaagattggttgtaaagaataagagatagatgag 13197003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 23612470 - 23612379
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag 110  Q
    |||||||||||||||||||||||||   ||| |||||||  ||| ||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  23612470 caaatactatcgaagtagtaaaaatcatgttcccacaagggctggttttaatctcaataattcaattacgttgtaaattaggatgtataaag 23612379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 12516235 - 12516424
Alignment:
Q  19 caaatactatcgaagtagtaaaa--atatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatt 115  Q
    |||| ||||||||||| ||||||  |||||||| ||||||| |||| ||||||| | ||||||||||    | | | |   || ||||||||| ||||||    
T  12516235 caaaaactatcgaagttgtaaaataatatcgttcccacaaggactgtttttaatttcaataattcaaaggtgttattattcagaatgtataaatgttatt 12516334  T
Q  116 ttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtt-ttaagaataagagagagatga 204  Q
    ||| ||||  |||| | |||||||||||||| |||||||||| ||| ||||||||||||||||||||| | |||||| ||||||||||||    
T  12516335 ttgatttgtcactaggcagttgattggtttgattgcataaaagtaacgacagaaaataaagattggttgtaaagaatgagagagagatga 12516424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 30785252 - 30785164
Alignment:
Q  26 tatcgaagtagtaaaa--atatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaagtt 112  Q
    ||||||||||||||||  |||||||| ||||||| | || ||||||| | ||||||||||| ||| | | || ||||||||||||||||    
T  30785252 tatcgaagtagtaaaataatatcgttcccacaaggattgtttttaatttcaataattcaatcacgttattaattaggatgtataaagtt 30785164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 16954104 - 16954069
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  16954104 caaatactatcgaagtagtaaaaatatcgttcccac 16954069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 18824186 - 18824221
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  18824186 caaatactatcgaagtagtaaaaatatcgttcccac 18824221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 18825679 - 18825714
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  18825679 caaatactatcgaagtagtaaaaatatcgttcccac 18825714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 10498158 - 10498192
Alignment:
Q  176 gattggttttaagaataagagagagatgagtttag 210  Q
    ||||||||| |||||||||||||||||||||||||    
T  10498158 gattggtttaaagaataagagagagatgagtttag 10498192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 10664279 - 10664245
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  10664279 aaatactatcgaagtagtaaaaatatcgttcccac 10664245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 23597535 - 23597501
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  23597535 aaatactatcgaagtagtaaaaatatcgttcccac 23597501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 5584224 - 5584253
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtt 49  Q
    ||||||||||||||||||||||||||||||    
T  5584224 aaatactatcgaagtagtaaaaatatcgtt 5584253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 2e-63; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 20080509 - 20080700
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||||| ||||||||||||||| |||||  ||||||||||||| ||| ||||    
T  20080509 caaatactatcgaagtagtaaaaatatcgttcccacaatgactgattttaatctcaataattcaattacgttgtaagttaggatgtataaaagttctttt 20080608  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagttta 209  Q
    | ||||| |||| | ||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  20080609 gatttgccactaggcagttgattggtttgtttgcataaaagtaatgacagaaaataaagaatggttttaagaataagagagagatgagttta 20080700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 19 - 205
Target Start/End: Original strand, 14683233 - 14683422
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtata---aagttatt 115  Q
    ||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||| |||||||| ||   ||||||||    
T  14683233 caaataccatcgaagtactaaaaatatcgttcccacaaggactgattttaatctcaataattcaattacgttgtaaactaggatgtgtataaaagttatt 14683332  T
Q  116 ttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgag 205  Q
    ||||||||| |||| | ||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  14683333 ttgttttgccactaggcagttgattgatttgtttgcataaaagtaaagacaaaaaataaagattggttttaagaataaaagagagatgag 14683422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 10469467 - 10469275
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  |||||||||| |||||||||||    
T  10469467 caaatactatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaagttaggatgtataaaagttatttt 10469368  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||| | |||| | ||||||||||||||||||||||||| |||  ||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  10469367 gattttccactaggcagttgattggtttgtttgcataaaagtaacaacaaaaagtaaagattgattttaagaataagagagagatgagtttag 10469275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 3067768 - 3067960
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| | |  ||||||||| ||||||||||||||| |||||  ||||||||||||| ||| ||||    
T  3067768 caaatactatcgaagtagtaaaaatatcgttcccacaaggatttgttttaatctcaataattcaattacgttgtaagttaggatgtataaaagttctttt 3067867  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | | ||||||||||||||||||||||| ||| |||| ||  |||||||||||||||||||||||||||| ||||||||||    
T  3067868 gatttgccactaggcatttgattggtttgtttgcataaaagtaatgacaaaatttaaagattggttttaagaataagagagacatgagtttag 3067960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 37165940 - 37166130
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||  ||||||||||||||| |||||| ||||||||||||| ||| ||||    
T  37165940 caaatactatcgaagtagtaaaaatatcgtttccataaggactggttttaatcacaataattcaattacgttgtaaattaggatgtataaaggttctttt 37166039  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      ||||| |||| | |||||||||||||||||||||  ||  ||  ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  37166040 aatttgccactaggcagttgattggtttgtttgcat--aagcaataacagaaaataaagattggtttaaagaataagagagagatgaatttag 37166130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 13842956 - 13842776
Alignment:
Q  24 actatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttattttgtttt 122  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||| |||||| |||||| ||| ||||  |||    
T  13842956 actatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaaattaggatatataaaggttcttttaattt 13842857  T
Q  123 gctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgag 205  Q
    || |||| | ||||||||| ||||||||||||| |  ||  ||||||||||||||||||||||||||||||||||||||||||    
T  13842856 gccactaggcagttgattgatttgtttgcataaga--aataacagaaaataaagattggttttaagaataagagagagatgag 13842776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 9132554 - 9132741
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtata-aagttatttt 117  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||  ||||||||| ||||||||||||||| |||||  |||||| |||| ||||||||||    
T  9132554 caaatactatcaaagtagtaaaaatatcgttcccacaaggactagttttaatctaaataattcaattacgttgtaagttaggatatatataagttatttt 9132653  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtt 207  Q
    | ||||| |||| | |||||||||||||| |||||||||| ||| | || ||| ||||| ||||||||||||||||||||||||||||||    
T  9132654 gatttgccactaggcagttgattggtttgattgcataaaagtaatg-caaaaagtaaag-ttggttttaagaataagagagagatgagtt 9132741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 26135922 - 26136111
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  || |||||||||| ||| ||||    
T  26135922 caaatactatcgaagtagtaaaaatatcgtt-ccacaaggactggttttaatctcaataattcaattacgttgtaacttaagatgtataaaggttctttt 26136020  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||||  ||| | ||||||||| |||||||||||  ||  ||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  26136021 aatttgccgctaggcagttgattgatttgtttgcat--aagcaataacagaaaataaagattggtttaaagaataagagagagatgagtttag 26136111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 10345393 - 10345326
Alignment:
Q  143 tttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10345393 tttgtttgcataaaagtaatgacagaaaataaagattggttttaagaataagagagagatgagtttag 10345326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 26144341 - 26144491
Alignment:
Q  59 actgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttattttgttttgctactaagtagttgattggtttgtttgcataaaa 157  Q
    |||| ||||||||| ||||||||||||||| |||||  || |||||||||| ||| ||||  |||||  ||| | ||||||||| |||||||||||||      
T  26144341 actggttttaatctcaataattcaattacgttgtaacttaagatgtataaaagttcttttaatttgccgctaggaagttgattgatttgtttgcataagc 26144440  T
Q  158 ctaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      ||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  26144441 --aataacagaaaataaagattggtttaaagaataagagagagatgagtttag 26144491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 492 - 596
Target Start/End: Original strand, 22079171 - 22079275
Alignment:
Q  492 acacaatccgtctttataaactaacatcctccaacaccatttatttagtaatgacaagttaaactccctcaaccttctaacacctaacccttcatcctcc 591  Q
    |||||| || ||||||| ||| |||||||||||||||||||||  |||||| |||||||| |||||||| | |||  | |||||||||||||||||||||    
T  22079171 acacaacccttctttatcaaccaacatcctccaacaccatttacctagtaacgacaagttgaactcccttagcctcatgacacctaacccttcatcctcc 22079270  T
Q  592 ttact 596  Q
    |||||    
T  22079271 ttact 22079275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 20595933 - 20596011
Alignment:
Q  17 atcaaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaa 95  Q
    ||||||||||||| ||||||||||||| ||||| ||||||  |||| ||||||| | |||||||||| |||| ||||||    
T  20595933 atcaaatactatctaagtagtaaaaatttcgttcccacaatgactggttttaatttcaataattcaactacgttgtaaa 20596011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 22611635 - 22611680
Alignment:
Q  150 gcataaaactaaagacagaaaataaagattggttttaagaataaga 195  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||    
T  22611635 gcataaaattaatgacagaaaataaagattggttttaagaataaga 22611680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 16166067 - 16166024
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  16166067 caaatactatcgaagtagtaaaaatatcgttcccacaaggactg 16166024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 558
Target Start/End: Original strand, 4959826 - 4959865
Alignment:
Q  519 cctccaacaccatttatttagtaatgacaagttaaactcc 558  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  4959826 cctccaacaccatttatcaagtaatgacaagttaaactcc 4959865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 6603776 - 6603741
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  6603776 caaatactatcgaagtagtaaaaatatcgttcccac 6603741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 8277315 - 8277280
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8277315 caaatactatcgaagtagtaaaaatatcgttaccac 8277280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 13449575 - 13449610
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  13449575 caaatactatcgaagtagtaaaaatatcgttcccac 13449610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 4543124 - 4543090
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  4543124 aaatactatcgaagtagtaaaaatatcgttcccac 4543090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 37415218 - 37415252
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  37415218 aaatactatcgaagtagtaaaaatatcgttcccac 37415252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 45286864 - 45286893
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtt 49  Q
    ||||||||||||||||||||||||||||||    
T  45286864 aaatactatcgaagtagtaaaaatatcgtt 45286893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 2e-60; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 3875607 - 3875413
Alignment:
Q  17 atcaaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatt 115  Q
    ||||||||||||||||||||||||||||||||| ||||||| || | ||||||||| ||||||||||||||| |||||  ||||||||||||| ||| ||    
T  3875607 atcaaatactatcgaagtagtaaaaatatcgttcccacaaggaccggttttaatctcaataattcaattacgttgtaagttaggatgtataaaagttctt 3875508  T
Q  116 ttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    ||| ||||| ||||   ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3875507 ttgatttgccactagtcagttgattggtttgtttgcataaaagtaatgacagaaaataaagattggttttaagaataagagaaagatgagtttag 3875413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 12220114 - 12219922
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| ||||||||||||||| |||||  |||||||||| |||||| ||||    
T  12220114 caaatactatcgaagtagtaaaaatttcgttcccacaaggactgattttaatctcaataattcaattacgttgtaagttaggatgtataaaagttttttt 12220015  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | ||||||||||||||||||||||||| ||| |||| ||| ||||| ||| |||||||||||||||||||||||||||||    
T  12220014 gatttgccactaggcagttgattggtttgtttgcataaaattaacgacaaaaagtaaaggttgattttaagaataagagagagatgagtttag 12219922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 16179461 - 16179274
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacgg----tgtaaaataggatgtataaa-gtta 113  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| |||||||||||||||     |||||||||||||||||||| ||||    
T  16179461 caaatactatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgtacattgtaaaataggatgtataaaagtta 16179362  T
Q  114 ttttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagaga 201  Q
    ||||||||||| |||| | ||||||||||| ||||||||||||| |||||||| |||||||||| ||||||||| || ||||||||||    
T  16179361 ttttgttttgccactaggaagttgattggtctgtttgcataaaagtaaagacaaaaaataaagactggttttaataacaagagagaga 16179274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 37937009 - 37937198
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||||||| | |||||||||| |||| |||||  |||||||||| |||||| ||||    
T  37937009 caaatactatcgaagtagtaaaaatatcattcccacaagaactggttttaatttcaataattcaactacgttgtaagttaggatgtataaaagttctttt 37937108  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | ||| ||||||||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  37937109 gatttgccactaggcagtagattggtttgtttgcataaaagta---acagaaaataaagattggttttaagaataagagagagatgagtttag 37937198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 22631160 - 22630967
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| || | ||||||||| ||||||| ||||| | |||||  |||||||||| |||||| ||||    
T  22631160 caaatactatcgaagtagtaaaaatatcgttcccacaaggaccggttttaatctcaataatttaattatgttgtaagttaggatgtataaaagttctttt 22631061  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaa-gacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | ||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||||||||||||||||||||||    
T  22631060 gatttgccactaggcagttgattggtttgtttgcataaaagtaaatgatagaaaataaagattgtttttaagaataagagagagatgagtttag 22630967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 40258928 - 40259118
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag-ttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| |||||||||  |||||||||||||| |||||| |||||||||||||| || ||||    
T  40258928 caaatactatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctctataattcaattacgttgtaaattaggatgtataaaggttctttt 40259027  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      ||||| |||| | | |||||||||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40259028 aatttgccactaggcaattgattggtttgtttgcataagc--aatgacagaaaataaagattggttttaagaataagagagagatgagtttag 40259118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 17877427 - 17877232
Alignment:
Q  17 atcaaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatt 115  Q
    ||||||||||| ||||||||||||||||||| | |||| ||   || ||||||| | ||||||||||||||| ||||||||| |||||||||| ||| ||    
T  17877427 atcaaatactaccgaagtagtaaaaatatcggtcccaccagggttggttttaatttcaataattcaattacgttgtaaaatatgatgtataaaagttctt 17877328  T
Q  116 ttgttttgctactaagtagttgattggtttgtttgca-taaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    ||||||||| ||||   |||||||||||||||||||| ||||| ||| |||||||| ||||  ||||||||||||||||||| |||||||||||||    
T  17877327 ttgttttgccactagacagttgattggtttgtttgcaataaaagtaacgacagaaagtaaaagttggttttaagaataagagggagatgagtttag 17877232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 16790547 - 16790736
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||| | ||||||| |||| ||||||||| ||||||||||||||| |||||  || ||||||| |||||| ||||    
T  16790547 caaatactatcgaagtagtaaaaatatcgct-ccacaaggactggttttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttt 16790645  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||||  ||| | ||||||||| |||||||||||  ||  ||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  16790646 aatttgccgctaggcagttgattgatttgtttgcat--aagcaataacagaaaataaagattggtttaaagaataagagagagatgagtttag 16790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 23205488 - 23205351
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| |||| || |||| ||||||||| ||||||||||||||| |||||  |||||||||| |||||||||||    
T  23205488 caaatactatcgaagtagtaaaaatatcgttcccacgaggactggttttaatctcaataattcaattacgttgtaagttaggatgtataaaagttatttt 23205389  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataa 155  Q
    | ||||| |||| | |||||||||||||||||||||||    
T  23205388 gatttgccactaggcagttgattggtttgtttgcataa 23205351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 23677092 - 23676955
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| |||| || |||| ||||||||| ||||||||||||||| |||||  |||||||||| |||||||||||    
T  23677092 caaatactatcgaagtagtaaaaatatcgttcccacgaggactggttttaatctcaataattcaattacgttgtaagttaggatgtataaaagttatttt 23676993  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataa 155  Q
    | ||||| |||| | |||||||||||||||||||||||    
T  23676992 gatttgccactaggcagttgattggtttgtttgcataa 23676955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 1386214 - 1386401
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  || |||||||||| ||| ||||    
T  1386214 caaatactatcgaagtagtaaaa-tatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaacttaagatgtataaaggttctttt 1386312  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||||  ||| | |||||||||||||| ||||||  ||  ||  ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  1386313 aatttgccgctaggcagttgattggtttg-ttgcat--aagcaataacagaaaat-aagattggtttaaagaataagagagagatgagtttag 1386401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 9966233 - 9966343
Alignment:
Q  97 taggatgtataaa-gttattttgttttgctactaagtagttgattggtttgtttgcataaaactaaaga-cagaaaataaagattggtttt-aagaataa 193  Q
    ||||||||||||| |||||||||||||||| ||| | |||||||||||||| || ||||||| |||  | || |||||||||||||||||| ||||||||    
T  9966233 taggatgtataaaagttattttgttttgct-ctaggcagttgattggtttgattacataaaagtaactaacataaaataaagattggttttaaagaataa 9966331  T
Q  194 gagagagatgag 205  Q
    ||||||||||||    
T  9966332 gagagagatgag 9966343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 29440807 - 29440773
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||||||||    
T  29440807 aaatactatcgaagtagtaaaaatatcgtttccac 29440773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 544 - 593
Target Start/End: Complemental strand, 2467689 - 2467640
Alignment:
Q  544 gacaagttaaactccctcaaccttctaacacctaacccttcatcctcctt 593  Q
    ||||| |||||||| |||||||||||||| || |||||||||||||||||    
T  2467689 gacaaattaaactctctcaaccttctaacccccaacccttcatcctcctt 2467640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 9188444 - 9188479
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  9188444 caaatactatcgaagtagtaaaaatatcgttcccac 9188479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 33310979 - 33310944
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33310979 caaatactatcgaagtagtaaaaatatcgttcccac 33310944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 8888948 - 8888914
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  8888948 aaatactatcgaagtagtaaaaatatcgttcccac 8888914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 10601166 - 10601136
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtt 49  Q
    |||||||||||||||||||||||||||||||    
T  10601166 caaatactatcgaagtagtaaaaatatcgtt 10601136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 24235412 - 24235378
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  24235412 aaatactatcgaagtagtaaaaatatcgttcccac 24235378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 24238684 - 24238650
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  24238684 aaatactatcgaagtagtaaaaatatcgttcccac 24238650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 25959482 - 25959516
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  25959482 aaatactatcgaagtagtaaaaatatcgttcccac 25959516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 42368492 - 42368534
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    |||||||||||||||| ||||||||||||| |||||| |||||    
T  42368492 aaatactatcgaagtaataaaaatatcgttcccacaaaaactg 42368534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 45499151 - 45499185
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  45499151 aaatactatcgaagtagtaaaaatatcgttcccac 45499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 25871096 - 25871067
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtt 49  Q
    ||||||||||||||||||||||||||||||    
T  25871096 aaatactatcgaagtagtaaaaatatcgtt 25871067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 30274561 - 30274590
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtt 49  Q
    ||||||||||||||||||||||||||||||    
T  30274561 aaatactatcgaagtagtaaaaatatcgtt 30274590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 3e-56; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 17664887 - 17664700
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    |||||| ||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||||  |||||| || |||||||||| ||||||||    
T  17664887 caaatattatcgaagtagtaaaaatatcgttctcacaaggactgattttaatctcaataattcaattacattgtaaactaagatgtataaaagttatttt 17664788  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgag 205  Q
    ||||||| |||| | ||||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  17664787 gttttgccactaggcagttgattgatttgtttgcataaaagtaaagacataaaataaagattggtttcaagaataaaagagagatgag 17664700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 23044477 - 23044286
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||| |||||||||| || ||| |||||||||||    
T  23044477 caaatactatcgaagtagtaaaaatatcgttcccataaggactgattttaatctcaataattcaattacgttgtaaaatagaatttataaaagttatttt 23044378  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtttt-aagaataagagagagatgagtttag 210  Q
    | ||||| |||| | ||||||||||||||||||||||||| ||| |||| ||| |||   |||||||| |||||||||||||||||||||||||    
T  23044377 gatttgccactaggcagttgattggtttgtttgcataaaagtaacgacaaaaagtaa--gttggttttaaagaataagagagagatgagtttag 23044286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 26293125 - 26292934
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    |||||| |||| ||||||||||||||| ||| ||| ||| |||| ||||||||| ||||||||||||||  |||||| || ||||||| |||||| ||||    
T  26293125 caaataatatcaaagtagtaaaaatattgttcccataagtactggttttaatctcaataattcaattacattgtaaattaagatgtataaaagttctttt 26293026  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | |||||||||||||| |||||||||| ||| |||| ||| ||||| |||||||||||||||||||||||||||||||||    
T  26293025 gatttgccactaggcagttgattggtttgattgcataaaagtaatgacaaaaagtaaag-ttggttttaagaataagagagagatgagtttag 26292934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 26907204 - 26907372
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  |||||||||| |||||| ||||    
T  26907204 caaatactatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaagttaggatgtataaaagttctttt 26907303  T
Q  118 gttttgctactaagtagttgattgg-tttgtttgcataaaactaaagacagaaaataaagattggtttt 185  Q
    | ||||| |||| | |||||||||| ||||||||||||||| ||| || ||||| ||||||||||||||    
T  26907304 gatttgccactaggcagttgattggttttgtttgcataaaagtaatgatagaaattaaagattggtttt 26907372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 17748767 - 17748584
Alignment:
Q  25 ctatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttattttgttttg 123  Q
    |||| |||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||| ||| |||||| ||||||||||||| ||| ||||  ||||    
T  17748767 ctattgaagtagtaaaaatatcgtt-ccacaaggactggttttaatctcaataattcaatcacgttgtaaattaggatgtataaaggttcttttaatttg 17748669  T
Q  124 ctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    |  ||| | |||||||||||||||||||||  ||  ||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  17748668 ccgctaggcagttgattggtttgtttgcat--aagcaataacataaaataaagattggttttaagaataagagagagatgagtttag 17748584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 22131566 - 22131405
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    |||| |||||||||||||||||||||||||||||||||| ||||  |||||||| ||||||||||||||| |||||| |||||||||| ||||||||||     
T  22131566 caaaaactatcgaagtagtaaaaatatcgtttccacaaggactggatttaatctcaataattcaattacgttgtaaattaggatgtataaaagttattta 22131467  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattg 180  Q
    ||||| | |||| | ||||| || ||||| |||||||||| |||  |||||||||||||||||    
T  22131466 gtttttccactaggcagttggtttgtttg-ttgcataaaagtaacaacagaaaataaagattg 22131405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 11958980 - 11959117
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    |||||||||||||||||||||||||||| || | ||||| |||||||||||||| ||||||||||||||| |||||| ||||||||||||| ||| ||||    
T  11958980 caaatactatcgaagtagtaaaaatatcattcctacaaggactgattttaatctcaataattcaattacgttgtaaattaggatgtataaaggttctttt 11959079  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataa 155  Q
    | ||||| |||| | ||||||||||||||||| |||||    
T  11959080 gatttgccactaggcagttgattggtttgtttccataa 11959117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 12088291 - 12088102
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||  || ||||||| |||||| ||||    
T  12088291 caaatactatcgaagtagtaaaaatatcgtt-ccacaagaactggttttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttt 12088193  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
       ||||  ||| |  |||||||| |||||||||||  ||  ||  |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  12088192 aaattgccgctaggcggttgattgttttgtttgcat--aagcaataacagaaaataaagattggatttaagactaagagagagatgagtttag 12088102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 12058282 - 12058470
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttattttg 118  Q
    ||||||||||||||||||| ||||||| || ||||||| |||| ||||||||| ||||||||||||||| |||||  || ||||||| |||||| ||||     
T  12058282 aaatactatcgaagtagtagaaatatcatt-ccacaaggactggttttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttta 12058380  T
Q  119 ttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
     ||| || ||| | |||| ||||||||||||||||  ||  ||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  12058381 attttctgctaggcagttaattggtttgtttgcat--aagcaataacagaaaataaagattggtttaaagaataagagagagatgagtttag 12058470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 468 - 651
Target Start/End: Original strand, 28455872 - 28456056
Alignment:
Q  468 cataatgagccttcaacacattata-cacaatccgtctttataaactaacatcctccaacaccatttatttagtaatgacaagttaaactccctcaacct 566  Q
    |||| |||| |||||||||  |||| ||||| || ||||||| ||| |||||||||||||||||||||  |||||| |||||||| |||||||||| |||    
T  28455872 catagtgagtcttcaacaccctatatcacaacccatctttatcaaccaacatcctccaacaccatttacctagtaacgacaagttgaactccctcagcct 28455971  T
Q  567 tctaacacctaacccttcatcctccttactctgacaaacagaatcttaattcacccaagatattttgctaaaattctcacatccc 651  Q
     || |||||| ||||||||||||| |||||  |||||||||| || || ||||||||||||||||| ||||||| ||||| ||||    
T  28455972 cctgacaccttacccttcatcctcattacttcgacaaacagagtcctagttcacccaagatattttcctaaaatcctcacctccc 28456056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 34132772 - 34132961
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  || ||||||| |||||| ||||    
T  34132772 caaatactatcgaagtagtaaaaatatcgtt-ccacaaggactggttttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttt 34132870  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
       ||||  ||| |  |||||||| |||||||||||  ||  ||  |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  34132871 aaattgccgctaggcggttgattgttttgtttgcat--aagcaataacagaaaataaagattggatttaagactaagagagagatgagtttag 34132961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 34143003 - 34143192
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  || ||||||| |||||| ||||    
T  34143003 caaatactatcgaagtagtaaaaatatcgtt-ccacaaggactggttttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttt 34143101  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
       ||||  ||| |  |||||||| |||||||||||  ||  ||  |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  34143102 aaattgccgctaggcggttgattgttttgtttgcat--aagcaataacagaaaataaagattggatttaagactaagagagagatgagtttag 34143192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 18953032 - 18952842
Alignment:
Q  19 caaatactatcgaagtagtaaaa--atatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag-ttatt 115  Q
    |||| |||||| |||||||||||  |||||||| ||||||| |||| ||||||| | || ||||||| |||| | | ||||||||||||||||| |||||    
T  18953032 caaaaactatcaaagtagtaaaataatatcgttcccacaaggactgtttttaatttcaacaattcaagtacgttattaaataggatgtataaaggttatt 18952933  T
Q  116 ttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtttt-aagaataagagagagatgag 205  Q
    ||||||||| |||| | | |||||||||| |||||||||||| |||  || |||| ||||| |||||||| ||||||||||||||||||||    
T  18952932 ttgttttgccactaggcaattgattggttcgtttgcataaaagtaacaactgaaagtaaaggttggttttaaagaataagagagagatgag 18952842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 35049772 - 35049872
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| | ||||||||||||| |||||  |||||||||| |||||||||||    
T  35049772 caaatactatcgaagtagtaaaaatatcgttcccataaggactgattttaatctcagtaattcaattacgttgtaagttaggatgtataaaagttatttt 35049871  T
Q  118 g 118  Q
    |    
T  35049872 g 35049872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 20055996 - 20055923
Alignment:
Q  133 agttgattggtttgtttgcataaaactaaagacagaaaataaagattggtttt-aagaataagagagagatgag 205  Q
    |||||||||||||| |||||||||| ||| |||||||||||||||||| |||| |||||||||||||| |||||    
T  20055996 agttgattggtttgattgcataaaagtaacgacagaaaataaagattgattttaaagaataagagagatatgag 20055923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 26895468 - 26895577
Alignment:
Q  98 aggatgtataaa-gttattttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtttta-agaataaga 195  Q
    |||||||||||| ||||||||||||||| | || | | |||||||||||| |||||||||| ||| || | ||||||||| | |||| || |||||||||    
T  26895468 aggatgtataaaagttattttgttttgccattaggcaattgattggtttgattgcataaaagtaacgataaaaaataaagctcggttgtagagaataaga 26895567  T
Q  196 gagagatgag 205  Q
    ||||||||||    
T  26895568 gagagatgag 26895577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 43492087 - 43492050
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaag 57  Q
    |||||||||||||||||||||||||||||| |||||||    
T  43492087 aaatactatcgaagtagtaaaaatatcgttcccacaag 43492050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 14015930 - 14015965
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||| ||||||||||||||||||||||||||||||    
T  14015930 caaatcctatcgaagtagtaaaaatatcgtttccac 14015965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 22936732 - 22936766
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  22936732 aaatactatcgaagtagtaaaaatatcgttcccac 22936766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 41306318 - 41306352
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  41306318 aaatactatcgaagtagtaaaaatatcgttcccac 41306352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 41876546 - 41876580
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  41876546 aaatactatcgaagtagtaaaaatatcgttcccac 41876580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 42063260 - 42063226
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  42063260 aaatactatcgaagtagtaaaaatatcgttcccac 42063226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 582
Target Start/End: Complemental strand, 35122236 - 35122147
Alignment:
Q  493 cacaatccgtctttataaactaacatcctccaacaccatttatttagtaatgacaagttaaactccctcaaccttctaacacctaaccct 582  Q
    |||||||| ||| |||  |||||||||||||||||||||||   ||||||||  |  ||||||| ||||||||| ||||| || ||||||    
T  35122236 cacaatccttctctatccactaacatcctccaacaccatttccctagtaatgcaacattaaacttcctcaacctcctaacccccaaccct 35122147  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 48
Target Start/End: Original strand, 26752493 - 26752521
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgt 48  Q
    |||||||||||||||||||||||||||||    
T  26752493 aaatactatcgaagtagtaaaaatatcgt 26752521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 3e-56; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 53009345 - 53009536
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaagttattttg 118  Q
    |||||||||||||| |||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  ||||||||||||| ||  |||     
T  53009345 caaatactatcgaattagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaagttaggatgtataaaatttctttt 53009444  T
Q  119 ttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||| |||| | ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  53009445 gattgccactaggcagttgattggtttgtttgcataaaagtaatgacagaaattaaagattggttttaagaataagagagagatgagtttag 53009536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 30392904 - 30392712
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagtta-ttt 116  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  |||||||||| ||||||| |||    
T  30392904 caaatactatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaagttaggatgtataaaagttatttt 30392805  T
Q  117 tgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    || ||||| |||| | |||||||||||||| |||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||||||    
T  30392804 tgatttgccactaggcagttgattggtttgattgcataaaagtaacgacagaaagtaaag-ttggttttaagaataagagagagatgagtttag 30392712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 25962391 - 25962202
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| | || ||||||| | |||||||||| |||| |||||  |||||||||| |||||| ||||    
T  25962391 caaatactatcgaagtagtaaaaatatcgttcccacaaggagtggttttaatttcaataattcaactacgttgtaagttaggatgtataaaagttctttt 25962292  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | ||| ||||||||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  25962291 gatttgccactaggcagtagattggtttgtttgcataaaagta---acagaaaataaagattggttttaagaataagagagagatgagtttag 25962202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 26 - 210
Target Start/End: Original strand, 46955273 - 46955456
Alignment:
Q  26 tatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttattttgttttgc 124  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||| ||||||||||||| ||| ||||  |||||    
T  46955273 tatcgaagtagtaaaaatatcgttcccacaaggactgattttaatctcaataattcaattacgttgtaaattaggatgtataaatgttcttttagtttgc 46955372  T
Q  125 tactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
     |||| | |||||||||| ||||||||||  || |||  |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  46955373 cactaggcagttgattgggttgtttgcat--aagtaataacagaaaataaagattggttttaagaataaaagagagatgagattag 46955456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 21420123 - 21419932
Alignment:
Q  17 atcaaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatt 115  Q
    ||||||||||||||||||||||||||||||||||||||||| | || ||||||||| |||||||||| |||| |||||  |  ||||||| |||||| ||    
T  21420123 atcaaatactatcgaagtagtaaaaatatcgtttccacaaggattggttttaatctcaataattcaactacgttgtaagttttgatgtataaaagttctt 21420024  T
Q  116 ttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    ||| ||| | |||| | |||| |||||||||||||||||||| ||   ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  21420023 ttgattttccactaggcagtttattggtttgtttgcataaaagta---acagaaattaaagattgattttaagaataagagagagatgagtttag 21419932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 40493156 - 40493345
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    |||||||||| |||||||||||||||||||| | ||||  |||||||||||||| |||||||||| |||| |||||  |||||||||| |||||| ||||    
T  40493156 caaatactattgaagtagtaaaaatatcgttcctacaatgactgattttaatctcaataattcaactacgttgtaagttaggatgtataaaagttctttt 40493255  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | ||||||||||||||||| ||||||| ||   ||| ||| ||||||| |||||||||||||||||||| ||||||||||    
T  40493256 gatttgccactaggcagttgattggtttgtttacataaaagta---acataaattaaagatcggttttaagaataagagagatatgagtttag 40493345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 11196005 - 11195819
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||| ||||||||| ||| ||||||| ||| |||||     | |||||||| ||||||||    
T  11196005 caaatactatcgaagtagtaaaaatatcgttcccataaggactggttttaatctcaatcattcaatcacgttgtaa-----gttgtataaaagttatttt 11195911  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| ||| ||||||||||||||||||||||| ||| |||| ||| ||||| | |||||||||||||||||||||||||||||||    
T  11195910 gatttgccactaggtaattgattggtttgtttgcataaaaataacgacaaaaagtaaag-tcggttttaagaataagagagagatgagtttag 11195819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 29544660 - 29544852
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||| ||||||||| ||| ||| ||| |||| ||| ||||| ||| ||||||||||| |||||  ||||||||| ||| | ||||||    
T  29544660 caaatactatcgaagtaataaaaatattgttcccataaggactggtttaaatctcaatcattcaattacgttgtaagttaggatgtacaaaagctatttt 29544759  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | |||||||||||||| |||||||||| ||| |||| ||| ||||| ||| |||||||||||||||||| ||||||||||    
T  29544760 gatttgccactaggcagttgattggtttgattgcataaaagtaacgacaaaaagtaaaggttgattttaagaataagagagatatgagtttag 29544852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 18672871 - 18673060
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||| ||||||||| | || ||||||||| ||||||||||||||| |||||  || ||||||| |||||| ||||    
T  18672871 caaatactatcgaagtagtaaaaatatcg-ttccacaaggattggttttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttt 18672969  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||||  ||| | ||||||||| |||||||||||  ||  ||  ||| ||||||||||||||||| |||||||||||||||||||||||||    
T  18672970 aatttgccgctaggcagttgattgatttgtttgcat--aagcaataacataaaataaagattggtttaaagaataagagagagatgagtttag 18673060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 97 - 210
Target Start/End: Complemental strand, 35510245 - 35510135
Alignment:
Q  97 taggatgtataaagttattttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagag 196  Q
    ||||||||||||| |||||||||||  |  ||| | ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  35510245 taggatgtataaa-ttattttgtttgcc--ctaggcagttgattggtttgtttgcataaaagtaatgacagaaaataaagattggttttaagattaagag 35510149  T
Q  197 agagatgagtttag 210  Q
    ||||||||||||||    
T  35510148 agagatgagtttag 35510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 15164532 - 15164392
Alignment:
Q  17 atcaaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag-ttatt 115  Q
    |||||| |||||||||||||||||| ||||||| | ||||| |||  ||||||||| || ||||| | |||| | | ||||||||||||||||| |||||    
T  15164532 atcaaaaactatcgaagtagtaaaa-tatcgttcctacaaggactatttttaatctcaacaattctactacgttattaaataggatgtataaaggttatt 15164434  T
Q  116 ttgttttgctactaagtagttgattggtttgtttgcataaaa 157  Q
    ||| ||||| |||| ||| |||||| ||||||||||||||||    
T  15164433 ttgatttgccactaggtaattgatttgtttgtttgcataaaa 15164392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 519 - 632
Target Start/End: Complemental strand, 16698947 - 16698834
Alignment:
Q  519 cctccaacaccatttatttagtaatgacaagttaaactccctcaaccttctaacacctaacccttcatcctccttactctgacaaacagaatcttaattc 618  Q
    |||||| ||| |||||  ||||||||| || ||||| ||||| ||||| || || ||||||||  ||||||| ||||| ||||||||||||||  |||||    
T  16698947 cctccagcacgatttacctagtaatgataaattaaattcccttaacctcctgacgcctaacccaccatcctctttactttgacaaacagaatcccaattc 16698848  T
Q  619 acccaagatatttt 632  Q
    |||||||| |||||    
T  16698847 acccaagagatttt 16698834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 18911836 - 18911802
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||||||||    
T  18911836 aaatactatcgaagtagtaaaaatatcgtttccac 18911802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 29325154 - 29325119
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  29325154 caaatactatcgaagtagtaaaaatatcgttcccac 29325119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 40616597 - 40616632
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  40616597 caaatactatcgaagtagtaaaaatatcgttcccac 40616632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 52530724 - 52530759
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  52530724 caaatactatcgaagtagtaaaaatatcgttcccac 52530759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 34319709 - 34319743
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  34319709 aaatactatcgaagtagtaaaaatatcgttcccac 34319743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 40902865 - 40902899
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  40902865 aaatactatcgaagtagtaaaaatatcgttcccac 40902899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 44808747 - 44808781
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  44808747 aaatactatcgaagtagtaaaaatatcgttcccac 44808781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 48637837 - 48637803
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  48637837 aaatactatcgaagtagtaaaaatatcgttcccac 48637803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 34017575 - 34017604
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtt 49  Q
    ||||||||||||||||||||||||||||||    
T  34017575 aaatactatcgaagtagtaaaaatatcgtt 34017604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 1e-52; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 17531431 - 17531621
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag-ttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| | |||| |||||||||||||| || ||||    
T  17531431 caaatactatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttataaattaggatgtataaaggttctttt 17531530  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      | ||| |||| | |||||||||||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17531531 aatatgccactaggcagttgattggtttgtttgcataagc--aatgacagaaaataaagattggttttaagaataagagagagatgagtttag 17531621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 34983564 - 34983747
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||| |||||  ||| |||||| |||||| ||||    
T  34983564 caaatactatcgaagtagtaaaaatatcgttcccacaaggattgattttaatctcaataattcaattacgttgtaagttagaatgtataaaagttctttt 34983663  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagaga 201  Q
    | ||| | |||| | ||||||||||||||||||||||||| ||| |||| ||| |||||||||||||| |||||||||||||||    
T  34983664 gatttaccactaggcagttgattggtttgtttgcataaaagtaatgacataaattaaagattggttttgagaataagagagaga 34983747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 37409104 - 37408910
Alignment:
Q  17 atcaaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatt 115  Q
    |||||||||||| || ||||||||||||| |||  || ||  | || ||||||||| ||||||||||||||| |||||  ||||||||||||| ||| ||    
T  37409104 atcaaatactatggatgtagtaaaaatattgttctcataatgattggttttaatctcaataattcaattacgttgtaagctaggatgtataaaagttctt 37409005  T
Q  116 ttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    ||| ||||| |||||  ||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  37409004 ttgatttgccactaaacagttgattggtttgtttgcataaaagtaatgacagaaaataaagattgattttaagaataagagagagatgagtttag 37408910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 17528536 - 17528726
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag-ttatttt 117  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||| ||||||||| |||||| |||||||| | |||| |||||||||||||| || ||||    
T  17528536 caaatactatcaaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataatacaattacgttataaattaggatgtataaaggttctttt 17528635  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      ||||| |||| | |||||||||||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17528636 aatttgccactaggcagttgattggtttgtttgcataagc--aatgacagaaaataaagattggttttaagaataagagagagatgagattag 17528726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 54720393 - 54720200
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||| |||||  |||||||||| |||||| ||||    
T  54720393 caaatactatcgaagtagtaaaaatatcgttcctacaaggactgattttaatctcaataattcaattacgttgtaagttaggatgtataaaagttctttt 54720294  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataag--agagagatgagtttag 210  Q
    | ||||| ||||   ||||||||||||||||| ||||||| ||| |||||||| |||||||||| ||| ||||||||  ||||||||||||||||    
T  54720293 gatttgccactagacagttgattggtttgtttacataaaagtaatgacagaaattaaagattgg-tttgagaataagatagagagatgagtttag 54720200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 25442636 - 25442824
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||| |||||| ||||||||||||| ||| ||||    
T  25442636 caaatactatcgaagtagtaaaaatatcgtt-ccacaaggattgattttaatctcaataattcaattacgttgtaaattaggatgtataaaggttctttt 25442734  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||||  ||| | |||||||||||||||||||||  ||  ||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  25442735 aatttgccgctaggcagttgattggtttgtttgcat--aagcaataacagaaaataaagattgg-tttaagaataagagagagatgagtttag 25442824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 20 - 210
Target Start/End: Complemental strand, 52991118 - 52990929
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttattttg 118  Q
    ||||| || ||||||||||||||||||||  ||| |||  ||||||||||||||||||||||||||||| |||||| || |||||||||| |||||||||    
T  52991118 aaatattaccgaagtagtaaaaatatcgtgcccataaggtctgattttaatcttaataattcaattacgttgtaaattaagatgtataaaggttattttg 52991019  T
Q  119 ttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
     ||||| |||| | ||||||||||||| |||||||  ||  ||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  52991018 atttgccactaggcagttgattggtttatttgcat--aagcaataacaaaaaataaagattggttttaagaataagagagagatgagtttag 52990929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 48063814 - 48063998
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||| ||||||||||||| ||| ||||    
T  48063814 caaatactatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaaattaggatgtataaaggttctttt 48063913  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagttt 208  Q
      ||| | |||| | || ||||||    ||||||||  ||  || ||||||||||||||||||||||||||||||||||||||||||||||    
T  48063914 aattttccactaggcagatgattg----gtttgcat--aagcaatgacagaaaataaagattggttttaagaataagagagagatgagttt 48063998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 17141789 - 17141637
Alignment:
Q  59 actgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttattttgttttgctactaagtagttgattggtttgtttgcataaaa 157  Q
    |||| ||||||||| ||||| ||||||||| |||||| ||||||||||||| ||| ||||| ||||| | |||  |||||||||||||||||||| ||||    
T  17141789 actggttttaatctcaataaatcaattacgttgtaaattaggatgtataaaagttcttttgatttgccattaaacagttgattggtttgtttgcacaaaa 17141690  T
Q  158 ctaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17141689 gtaatgacagaaaataaagattggttttaagaataagagagagatgagcttag 17141637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 32366906 - 32367094
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||| |||||  || || |||| |||||| ||||    
T  32366906 caaatactatcgaagtagtaaaaatatcg-ttccacaaggactggttttaatctcaataattcaattacgttgtaacttaagaagtataaaagttctttt 32367004  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagttta 209  Q
      |||||  ||| | ||||||||| |||||||||||  ||  ||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  32367005 aatttgccgctaggcagttgattgatttgtttgcat--aagcaataacagaaaataaagattggtttaaagaataagagagagatgagttta 32367094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 25486557 - 25486374
Alignment:
Q  19 caaatactatcgaagtagtaaaa--atatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag-ttatt 115  Q
    |||| ||||| ||||||||||||  |||||||| ||||||| |||| ||||||||| ||||||||||   || | | |   ||||||||||||| |||||    
T  25486557 caaaaactattgaagtagtaaaataatatcgttcccacaaggactgtttttaatctcaataattcaaaggcgttattattcaggatgtataaaggttatt 25486458  T
Q  116 ttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattgg-ttttaagaataagagag 198  Q
    ||||||||| |||| |||||||||||||||| |||||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  25486457 ttgttttgccactaggtagttgattggtttgattgcataaaagtaacgacagaaaataaagattggcttttaagaataagagag 25486374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 24 - 170
Target Start/End: Complemental strand, 35751856 - 35751710
Alignment:
Q  24 actatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttattttgtttt 122  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||||| ||||||||||||| | ||||||||||||||||| |||||||||||| |||    
T  35751856 actatcgaagtagtaaaaatatcgttcccacaaagactgattttaatctcaataattcaattatgttgtaaaataggatgtataaaagttattttgattt 35751757  T
Q  123 gctactaagtagttgattggtttgtttgcataaaactaaagacagaaa 170  Q
    || |||| | ||||| || ||||| |||||||||| |||  |||||||    
T  35751756 gccactaggcagttggtttgtttg-ttgcataaaaataacaacagaaa 35751710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 22416612 - 22416799
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||  ||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  || |||||||||| ||| ||||    
T  22416612 caaatactatcgaagtagtaaa--tatcgtt-ccacaaggactggttttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttt 22416708  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
       ||||  ||| |  |||||||| |||||||||||||    ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  22416709 aaattgccgctaggcggttgattgttttgtttgcataagc--aataacagaaaataaagattggttttaagaataagagagagatgagtttag 22416799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 19 - 205
Target Start/End: Original strand, 17039792 - 17039982
Alignment:
Q  19 caaatactatcgaagtagtaaaa--atatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag-ttatt 115  Q
    |||| |||||| |||||||||||  |||||||| ||||||| |||| ||| ||||| |||||||||| | || | | |   ||||||||||||| |||||    
T  17039792 caaaaactatcaaagtagtaaaataatatcgttcccacaaggactgttttcaatctcaataattcaaatgcgttattattcaggatgtataaaggttatt 17039891  T
Q  116 ttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtttt-aagaataagagagagatgag 205  Q
    ||| ||||| |||| | |||||||| ||||| |||||||||| ||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  17039892 ttgatttgccactaggcagttgatttgtttggttgcataaaagtaatgacagaaaataaagattggttttaaagaataagagagaaatgag 17039982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 46885333 - 46885230
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtata-aagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  ||||||||||| ||||||||||    
T  46885333 caaatactatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaagttaggatgtatagaagttatttt 46885234  T
Q  118 gttt 121  Q
    ||||    
T  46885233 gttt 46885230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 15195119 - 15195280
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| |||| || | || ||||||||| ||||||||||||||| ||||||||||||||||| |||||| ||||    
T  15195119 caaatactatcgaagtagtaaaaatatcgttcccacgaggattggttttaatctcaataattcaattacgttgtaaaataggatgtataaaagttctttt 15195218  T
Q  118 gttttgctactaagtagttgattggttt-gtttgcataaaactaaagacagaaaataaagatt 179  Q
    | ||||| | || | |||||||||||||   |||||||||| ||| ||| | |||||||||||    
T  15195219 g-tttgccagtaggcagttgattggtttaaattgcataaaagtaacgacgggaaataaagatt 15195280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 26 - 205
Target Start/End: Complemental strand, 27092311 - 27092128
Alignment:
Q  26 tatcgaagtagtaaaa--atatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag--ttattttgttt 121  Q
    ||||||||||||||||  |||| ||||||||||||| || ||||||||| |||||||||| |||| | | ||||||||||||||||   |||| ||| ||    
T  27092311 tatcgaagtagtaaaataatat-gtttccacaagaattgtttttaatctcaataattcaagtacgttattaaataggatgtataaaagtttatattgatt 27092213  T
Q  122 tgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtttt-aagaataagagagagatgag 205  Q
    ||| ||||   | |||||||||||| |||||||||| ||| || ||||| |||||| ||||||| |||||||| |||||||||||    
T  27092212 tgccactagacaattgattggtttgattgcataaaagtaacgatagaaagtaaagaatggttttaaagaataatagagagatgag 27092128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 210
Target Start/End: Original strand, 12561004 - 12561199
Alignment:
Q  22 atactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttattttgtt 120  Q
    ||||| |||||||||||||||||||| ||||||||| |||| ||||||||| |||||||||| |||| | |||  || ||||||| |||||| ||||  |    
T  12561004 atactgtcgaagtagtaaaaatatcg-ttccacaaggactggttttaatctcaataattcaactacgttataacttaagatgtataaaagttcttttaat 12561102  T
Q  121 ttgctactaagtagttgattggtttgtttgcataa------aac-taaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    ||||  ||| | |||||||||||||||||||||||      ||| ||||   |  | |||||||||||||| |||||||||||||||||||||||||    
T  12561103 ttgccgctaggcagttgattggtttgtttgcataagcaattaacataaaataaagatataaagattggtttaaagaataagagagagatgagtttag 12561199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 493 - 606
Target Start/End: Complemental strand, 29807687 - 29807574
Alignment:
Q  493 cacaatccgtctttataaactaacatcctccaacaccatttatttagtaatgacaagttaaactccctcaaccttctaacacctaacccttcatcctcct 592  Q
    |||||||||||||||| |||  ||||||||||||||||||||  ||||||  ||||||| | ||||||||  ||  | |||||||||||| |||||||||    
T  29807687 cacaatccgtctttatcaaccgacatcctccaacaccatttacatagtaacaacaagttgagctccctcatactcgtgacacctaaccctccatcctcct 29807588  T
Q  593 tactctgacaaaca 606  Q
    ||||| ||||||||    
T  29807587 tactccgacaaaca 29807574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 522 - 638
Target Start/End: Complemental strand, 25050531 - 25050415
Alignment:
Q  522 ccaacaccatttatttagtaatgacaagttaaactccctcaaccttctaacacctaacccttcatcctccttactctgacaaacagaatcttaattcacc 621  Q
    |||||||||||||  |||||| |||| ||||||||||| |||||| || ||||||||||||  ||| ||||||||||| ||||| |||||  | || |||    
T  25050531 ccaacaccatttacctagtaacgacaggttaaactcccgcaacctcctgacacctaaccctctatcatccttactctggcaaactgaatcccagtttacc 25050432  T
Q  622 caagatattttgctaaa 638  Q
    ||||||||||| |||||    
T  25050431 caagatattttcctaaa 25050415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 11785194 - 11785110
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtg-taaaataggat 102  Q
    ||||||||||| ||||||||||||||||| | ||||||| ||||  |||||||| ||||||||||||||| || |||||||||||    
T  11785194 caaatactatcaaagtagtaaaaatatcgctcccacaaggactggatttaatctcaataattcaattacgttgttaaaataggat 11785110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 46885236 - 46885169
Alignment:
Q  143 tttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    ||||||||||||||| ||| |||| ||| ||||||||| ||||||||||| |||||||||||||||||    
T  46885236 tttgtttgcataaaagtaacgacaaaaagtaaagattgattttaagaataggagagagatgagtttag 46885169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 28007968 - 28008036
Alignment:
Q  143 tttgtttgcataaaactaaagacagaaaataaagattggtt-ttaagaataagagagagatgagtttag 210  Q
    |||| |||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||| ||||    
T  28007968 tttgattgcataaaagtaatgacagaaaataaagattggttctaaagaataagagagagatgagattag 28008036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 11190942 - 11190900
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  11190942 aaatactatcgaagtagtaaaaatatcgttcccacgagaactg 11190900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 16184461 - 16184495
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||||||||    
T  16184461 aaatactatcgaagtagtaaaaatatcgtttccac 16184495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 2873980 - 2873925
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaat 76  Q
    |||||||||||||||||||||||||||||| |||| || |||| | |||||||||||    
T  2873980 aaatactatcgaagtagtaaaaatatcgttcccacgaggactg-tgttaatcttaat 2873925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 50461327 - 50461362
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  50461327 caaatactatcgaagtagtaaaaatatcgttcccac 50461362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 539242 - 539208
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  539242 aaatactatcgaagtagtaaaaatatcgttcccac 539208  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 2775910 - 2775868
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||    
T  2775910 aaatactatcgaagtaataaaaatatcgttcccacaaggactg 2775868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 2779152 - 2779110
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||    
T  2779152 aaatactatcgaagtaataaaaatatcgttcccacaaggactg 2779110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 6922936 - 6922902
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  6922936 aaatactatcgaagtagtaaaaatatcgttcccac 6922902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 7486987 - 7486945
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||    
T  7486987 aaatactatcgaagtaataaaaatatcgttcccacaaggactg 7486945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 10106378 - 10106412
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  10106378 aaatactatcgaagtagtaaaaatatcgttcccac 10106412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 24125915 - 24125881
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  24125915 aaatactatcgaagtagtaaaaatatcgttcccac 24125881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 30691151 - 30691117
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  30691151 aaatactatcgaagtagtaaaaatatcgttcccac 30691117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 35412921 - 35412887
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  35412921 aaatactatcgaagtagtaaaaatatcgttcccac 35412887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 8461272 - 8461301
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtt 49  Q
    ||||||||||||||||||||||||||||||    
T  8461272 aaatactatcgaagtagtaaaaatatcgtt 8461301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 24129192 - 24129163
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtt 49  Q
    ||||||||||||||||||||||||||||||    
T  24129192 aaatactatcgaagtagtaaaaatatcgtt 24129163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 593
Target Start/End: Original strand, 28624371 - 28624448
Alignment:
Q  516 catcctccaacaccatttatttagtaatgacaagttaaactccctcaaccttctaacacctaacccttcatcctcctt 593  Q
    ||||||||||||||| ||   || |||||| || ||||| || | |||||||||||||||||||||| | ||||||||    
T  28624371 catcctccaacaccacttccctaataatgaaaaattaaattcacgcaaccttctaacacctaaccctccttcctcctt 28624448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 550 - 602
Target Start/End: Original strand, 16179614 - 16179666
Alignment:
Q  550 ttaaactccctcaaccttctaacacctaacccttcatcctccttactctgaca 602  Q
    ||||||||||||||||| ||||| || |||||||||| |||||| ||| ||||    
T  16179614 ttaaactccctcaacctcctaactcccaacccttcatactccttcctcagaca 16179666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 28266332 - 28266300
Alignment:
Q  22 atactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||| ||||    
T  28266332 atactatcgaagtagtaaaaatatcgttcccac 28266300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 2e-51; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 19476338 - 19476154
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||| ||||||||||||| ||| ||||    
T  19476338 caaatactatcgaagtagtaaaaatatcgttcccacaaggactgattttaatctcaataattcaattacgttgtaaattaggatgtataaaggttctttt 19476239  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatga 204  Q
      |||||  ||| | |||||||||||||||||||||  ||  ||  |||||||||||||||||||||||||||||||||||||||||    
T  19476238 aatttgccgctaggcagttgattggtttgtttgcat--aagcaataacagaaaataaagattggttttaagaataagagagagatga 19476154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 21 - 210
Target Start/End: Complemental strand, 4512811 - 4512622
Alignment:
Q  21 aatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgta-taaagttattttgt 119  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||||||||||||| |||||  |||||||||  |||||||||||      
T  4512811 aatactatcgaagtagtaaaaatatcgttcccacaaggactgattttaatttcaataattcaattacgttgtaagttaggatgtacaaaagttattttta 4512712  T
Q  120 tttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    ||||| |||| | |||||||||||||| |||||||||| ||| || | ||| ||||| |||||||||||||||||||||||||||||||||    
T  4512711 tttgccactaggcagttgattggtttgattgcataaaattaacgaaataaagtaaag-ttggttttaagaataagagagagatgagtttag 4512622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 24400515 - 24400325
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  ||||||||||||| ||| ||||    
T  24400515 caaatactatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaacttaggatgtataaaggttctttt 24400416  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||||  ||| | |||||||||||||||||||||  ||  ||  ||||||||||||||||| |||||||||||||||||||||||||||||    
T  24400415 aatttgccgctaggcagttgattggtttgtttgcat--aagcaataacagaaaataaagattgattttaagaataagagagagatgagtttag 24400325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 24410634 - 24410444
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| || |||||||||||| |||||  |||||| |||||| ||| ||||    
T  24410634 caaatactatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaacaattcaattacgttgtaacttaggatatataaaggttctttt 24410535  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||||  ||| | |||||||||||||||||||||  ||  ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  24410534 aatttgccgctaggcagttgattggtttgtttgcat--aagcaataacagaaaataaagattggttttaagaataagagagagatgagtttag 24410444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 24155154 - 24155344
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||| ||| | || ||||||||| ||||||||||||||| |||||| ||||||||||||| ||| ||||    
T  24155154 caaatactatcgaagtagtaaaaatatcgttcccataaggattggttttaatctcaataattcaattacgttgtaaattaggatgtataaaggttctttt 24155253  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      ||||   ||| | |||||||||||||||||||||  ||  ||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  24155254 aatttgtcgctaggcagttgattggtttgtttgcat--aagcaataacagaaaataaagattggtttaaagaataagagagagatgagtttag 24155344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 26896045 - 26896237
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtata-aagttatttt 117  Q
    ||||||||||| ||||||||||||||||||| ||||| | |||| ||||||||| |||| |||||||||| |||||  ||||||||||| ||||||||||    
T  26896045 caaatactatcaaagtagtaaaaatatcgttcccacagggactggttttaatctcaatagttcaattacgttgtaagttaggatgtatagaagttatttt 26896144  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||| | |||| | |||||||||||||||||  |||||| |||  ||| ||| |||| |||| |||||||||||||||||||||||||||||    
T  26896145 gattttccactaggcagttgattggtttgtttcaataaaagtaacaacaaaaattaaacattgattttaagaataagagagagatgagtttag 26896237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 18855814 - 18856003
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| |||||||||||| || |||||  || |||||||||| ||| ||||    
T  18855814 caaatactatcgaagtagtaaaaatatcgtt-ccacaaggactggttttaatctcaataattcaattccgttgtaacttaagatgtataaaagttctttt 18855912  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      || ||  ||| | |||||||||||||||||||||  ||  ||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  18855913 aattggccgctaggcagttgattggtttgtttgcat--aagcaataacagaaaataaagattggtttaaagaataagagagagatgagtttag 18856003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 32110007 - 32109819
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa--gttattt 116  Q
    |||| |||||||||||||||||||||||||  ||||||| |||| |||||||||  | ||||| |||||| | | |  ||||||||| |||  |||||||    
T  32110007 caaaaactatcgaagtagtaaaaatatcgtacccacaaggactgtttttaatctccacaattctattacgttattacttaggatgtaaaaaaggttattt 32109908  T
Q  117 tgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgag 205  Q
    |||||||| |||| | ||||||| |||||| |||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  32109907 tgttttgccactaggaagttgatgggtttgattgcgtaaaagtaacgacagaaaataaagattggttttaagaataaaagagagatgag 32109819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 13947349 - 13947164
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaagttattttg 118  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||  || |||    |||||| ||||     
T  13947349 caaatactatcgaagtagtaaaaatatcgtt-ccacaaggactgattttaatctcaataattcaattacgttgtaacttaagat---aaaagttctttta 13947254  T
Q  119 ttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
     |||||  ||| | |||||||||||||||||||||  ||  ||  ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  13947253 atttgccgctaggcagttgattggtttgtttgcat--aagcaataacagaaaataaagattggtttaaagaataagagatagatgagtttag 13947164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 7128634 - 7128445
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  || ||||||| |||||| ||||    
T  7128634 caaatactatcgaagtagtaaaaatatcgtt-ccacaaggactggttttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttt 7128536  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||||  ||| | ||||||||| |||||||||||  ||  ||  ||||||||||||| || |||| |||||||||||||||||||||||||    
T  7128535 aatttgccgctaggcagttgattgatttgtttgcat--aagcaataacagaaaataaagtttagtttaaagaataagagagagatgagtttag 7128445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 28230931 - 28230741
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||  || |||||||||| ||| ||||    
T  28230931 caaatactatcgaagtagtaaaaatatcgtt-ccacaaggactgattttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttt 28230833  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagag-atgagtttag 210  Q
      |||||  |||   ||||||||| |||||||||||  ||  ||  ||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  28230832 aatttgccgctagacagttgattgatttgtttgcat--aagcaataacagaaaataaagattggtttaaagaataagatagagaatgagtttag 28230741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 11125480 - 11125668
Alignment:
Q  17 atcaaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag--ttat 114  Q
    |||||| | ||||||||||||||||||||| || ||||||| |||| ||||||||| || ||||| | |||  | | |  ||||||||| |||   ||||    
T  11125480 atcaaaaattatcgaagtagtaaaaatatcattcccacaaggactgtttttaatctcaacaattctagtacattattacttaggatgtaaaaaagattat 11125579  T
Q  115 tttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatg 203  Q
    |||| ||||| |||| | |  ||||||||||| || ||||||| ||| |||| || ||||||||||||||||||||||||| |||||||    
T  11125580 tttgatttgccactaggcatctgattggtttgattacataaaaataatgacaaaatataaagattggttttaagaataagatagagatg 11125668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 22561037 - 22561136
Alignment:
Q  107 aaagttattttgttttgctactaagtagttgattggtttgtttgcataaaactaa-agacagaaaataaagattggttt-taagaataagagagagatga 204  Q
    |||||||||||||||| |  ||| | |||||||||||||| |||||||||| |||   |||||||||||||||||||||  |||||||||||||||||||    
T  22561037 aaagttattttgttttacc-ctaggcagttgattggtttgattgcataaaagtaactaacagaaaataaagattggtttaaaagaataagagagagatga 22561135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 5737854 - 5737896
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  5737854 aaatactatcgaagtagtaaaaatatcgtttccgcaaggactg 5737896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 514 - 647
Target Start/End: Original strand, 10747858 - 10747990
Alignment:
Q  514 aacatcctccaacaccatttatttagtaatgacaagttaaactccctcaaccttctaacacctaacccttcatcctccttactctgacaaacagaatctt 613  Q
    |||||||||||||||||||||| || |||||| || ||||| || |  |||||  | ||||||||| |  | |||||||||||| |||| |||| |||      
T  10747858 aacatcctccaacaccatttatataataatgataaattaaattctcgtaacctgttgacacctaactcaccttcctccttactccgacacacag-atccc 10747956  T
Q  614 aattcacccaagatattttgctaaaattctcaca 647  Q
    |||||| |||||| ||||| ||||||| ||||||    
T  10747957 aattcaaccaagagattttcctaaaatcctcaca 10747990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 3596571 - 3596607
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaa 56  Q
    |||||||||||||||||||||||||||||| ||||||    
T  3596571 aaatactatcgaagtagtaaaaatatcgttcccacaa 3596607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 2379563 - 2379528
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  2379563 caaatactatcgaagtagtaaaaatatcgttcccac 2379528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 9954294 - 9954260
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  9954294 aaatactatcgaagtagtaaaaatatcgttcccac 9954260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 11729122 - 11729164
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    |||||||||||||||| ||||||||||||| |||||| |||||    
T  11729122 aaatactatcgaagtaataaaaatatcgttcccacaaaaactg 11729164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 30655789 - 30655747
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||    
T  30655789 aaatactatcgaagtaataaaaatatcgttcccacaaggactg 30655747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 1125527 - 1125556
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtt 49  Q
    ||||||||||||||||||||||||||||||    
T  1125527 aaatactatcgaagtagtaaaaatatcgtt 1125556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 34702379 - 34702338
Alignment:
Q  519 cctccaacaccatttatttagtaatgacaagttaaactccct 560  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  34702379 cctccaacaccatttgtgtagtaaagacaagttaaactccct 34702338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 3e-50; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 27354729 - 27354922
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||||||| |||| |  | || ||||||||| ||||||||||||| | || |||||||||||||| |||||| ||||    
T  27354729 caaatactatcgaagtagtaaaaatatcgttcccacgatgattgtttttaatctcaataattcaattatgttgcaaaataggatgtataaaagttctttt 27354828  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattgg-ttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | ||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  27354829 gatttgccactaggcagttgattgatttgtttgcataaaagtaatgacagaaaataaagattggtttttaagaataaaagagagatgagtttag 27354922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 17 - 208
Target Start/End: Original strand, 905469 - 905661
Alignment:
Q  17 atcaaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatt 115  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||| |||||  |||||||||| |||||||||    
T  905469 atcaaatactatcgaagtagtaaaaatatcgttcccacaaggactgattataatctcaataattcaattacgttgtaagttaggatgtataaaagttatt 905568  T
Q  116 ttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtttt-aagaataagagagagatgagttt 208  Q
    ||| ||||  |||| | | ||||||||||||||||||||||| ||| || | ||| ||||| |||||||| |||||||| ||||||||||||||    
T  905569 ttgatttgacactaggcatttgattggtttgtttgcataaaagtaacgataaaaagtaaag-ttggttttaaagaataaaagagagatgagttt 905661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 24 - 205
Target Start/End: Original strand, 672861 - 673043
Alignment:
Q  24 actatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag-ttattttgtttt 122  Q
    |||||||||||||||||| ||| ||| ||||||| | || ||||||||| || ||||||| |||| | | ||||||||||||||||| || |||||||||    
T  672861 actatcgaagtagtaaaa-tattgttcccacaaggattgtttttaatctcaacaattcaagtacgttattaaataggatgtataaaggttcttttgtttt 672959  T
Q  123 gctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtttt-aagaataagagagagatgag 205  Q
    |  |||| | |||||||||||||| ||| |||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  672960 gtcactaggcagttgattggtttgattggataaaagtaacgacataaaataaagattggttttaaagaataagagagagatgag 673043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 29643150 - 29643199
Alignment:
Q  164 acagaaaataaaga---ttggttttaagaataagagagagatgagtttag 210  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||||    
T  29643150 acagaaaataaagaaagttggttttaagaataagagagagatgagtttag 29643199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 20448164 - 20448122
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    |||||||||||||||||||||||||||||| ||||||| ||||    
T  20448164 aaatactatcgaagtagtaaaaatatcgttcccacaaggactg 20448122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 20533931 - 20533889
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    |||||||||||||||||||||||||||||| ||||||| ||||    
T  20533931 aaatactatcgaagtagtaaaaatatcgttcccacaaggactg 20533889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 45960536 - 45960571
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  45960536 caaatactatcgaagtagtaaaaatatcgttcccac 45960571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 1950238 - 1950272
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  1950238 aaatactatcgaagtagtaaaaatatcgttcccac 1950272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 2794559 - 2794525
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  2794559 aaatactatcgaagtagtaaaaatatcgttcccac 2794525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 20399185 - 20399143
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    ||||||||| |||||||||||||||||||| |||| |||||||    
T  20399185 aaatactatggaagtagtaaaaatatcgttcccacgagaactg 20399143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 28111388 - 28111354
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  28111388 aaatactatcgaagtagtaaaaatatcgttcccac 28111354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 33898659 - 33898621
Alignment:
Q  24 actatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  33898659 actatcgaagtagtaaaaatatcgttcccacaaggactg 33898621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 23021712 - 23021741
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtt 49  Q
    ||||||||||||||||||||||||||||||    
T  23021712 aaatactatcgaagtagtaaaaatatcgtt 23021741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 27536323 - 27536352
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtt 49  Q
    ||||||||||||||||||||||||||||||    
T  27536323 aaatactatcgaagtagtaaaaatatcgtt 27536352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 101; Significance: 1e-49; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 64195 - 64003
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||   |||||||||||| ||||||||    
T  64195 caaatactatcaaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaagtaaggatgtataaaagttatttt 64096  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | ||||||||||| ||||||||||||| ||| |||| ||| ||| ||||| |||| ||||||||||||||||||||||||    
T  64095 gatttgccactaggcagttgattggtatgtttgcataaaagtaacgacaaaaagtaaggattgatttttagaataagagagagatgagtttag 64003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 97; Significance: 2e-47; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 58468 - 58659
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||| ||||||||| ||||||| ||||||| |||||  ||||| ||||||| ||||||||    
T  58468 caaatactatcgaagtagtaaaaatatcgttcccaaaaggactg-ttttaatctcaataattaaattacgttgtaagttaggacgtataaaagttatttt 58566  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | ||||||||||||||||||||||||| |||  ||| ||| ||||||||| |||||||||||||||| ||||||||||||    
T  58567 gatttgccactaggcagttgattggtttgtttgcataaaagtaacaacaaaaagtaaagattgattttaagaataagagatagatgagtttag 58659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 58321 - 58395
Alignment:
Q  133 agttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtt 207  Q
    ||||||||||||||||||||||||| |||  | | ||| ||||||||| ||||||||||||||||||||||||||    
T  58321 agttgattggtttgtttgcataaaagtaacaataaaaagtaaagattgattttaagaataagagagagatgagtt 58395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 58418 - 58458
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaa 59  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  58418 caaatactattgaagtagtaaaaatatcgttcccacaagaa 58458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 4250 - 4069
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||| ||||||||||||| | |||||  |||||||||| |||||||||||    
T  4250 caaatactatcgaagtagtaaaattattgttcccacaaggactgattttaatctcaataattcaattatgttgtaagttaggatgtataaaagttatttt 4151  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagaga 199  Q
    | ||||| |||| | |||||||| |||||||||||||||| ||| |||| ||| ||||| ||| ||||||||||||||||||    
T  4150 gatttgccactaggaagttgatttgtttgtttgcataaaagtaacgacaaaaagtaaaggttgattttaagaataagagaga 4069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 10741 - 10557
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||||||||||||||||||  ||| ||||||| |||| ||||||||| |||||||||| |||| |||||  |||||||||| |||||| ||||    
T  10741 caaatactatcgaagtagtaaaaataatgttcccacaaggactggttttaatctcaataattcaactacgttgtaagttaggatgtataaaagttctttt 10642  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagt 206  Q
    |  |||| |||| | ||||||||||||||||| ||||||| ||   ||||||| |||||||||||||||||||||||||||||||||||    
T  10641 g-attgccactaggcagttgattggtttgtttacataaaatta---acagaaattaaagattggttttaagaataagagagagatgagt 10557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 86; Significance: 9e-41; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 15745 - 15556
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||  || |||||||||| ||| ||||    
T  15745 caaatactatcgaagtagtaaaaatatcgtt-ccacaaggactggttttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttt 15647  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||||  ||| | |||||||||||||||||||||||   |||  ||||||||||||||||  ||| |||||||||||||||||||||||||    
T  15646 aatttgccgctaggcagttgattggtttgtttgcataag--taataacagaaaataaagattcatttaaagaataagagagagatgagtttag 15556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 210
Target Start/End: Complemental strand, 19609 - 19424
Alignment:
Q  24 actatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttattttgtttt 122  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| |||||| ||||||||||||| ||| ||||  |||    
T  19609 actatcgaagtagtaaaaatatcgttcccacaaggactggttttaatctcaataattcaattacgttgtaaattaggatgtataaaggttcttttaattt 19510  T
Q  123 gctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    ||  ||| | |||||||||||||||||||||  ||  ||  ||| ||||||| | ||| |||||||||||||||||||||||||||||    
T  19509 gccgctaggcagttgattggtttgtttgcat--aagcaataacaaaaaataacgtttgattttaagaataagagagagatgagtttag 19424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 24 - 210
Target Start/End: Complemental strand, 29688 - 29509
Alignment:
Q  24 actatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttattttgtttt 122  Q
    |||||||||||||||||||||||||| ||||||| |||  ||||||||| ||||||||||||||| |      |    |||||||| ||| ||||  |||    
T  29688 actatcgaagtagtaaaaatatcgttcccacaaggactagttttaatctcaataattcaattacgtt------tgttttgtataaaggttcttttaattt 29595  T
Q  123 gctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    ||  |||   |||||||||||||||||||||  ||  ||  ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  29594 gccgctagacagttgattggtttgtttgcat--aagcaataacaaaaaataaagtttggttttaagaataagagagagatgagtttag 29509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 1860 - 2051
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||  |||||||| | |||||| ||||    
T  1860 caaatactatcgaagtggtaaaaatatcgttcccacaagaactgattttaatctcaataattcaattacgttgtaagttaggatgtttaaaagttgtttt 1959  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtttt-aagaataagagagagatgagtttag 210  Q
    |  |||| |||| |  |||||||||||||||||||||||  ||| |||| ||| ||||| |||||||| |||||||||||||| ||||| ||||    
T  1960 g-attgccactaggcggttgattggtttgtttgcataaatgtaacgacataaagtaaag-ttggttttaaagaataagagagatatgagcttag 2051  T

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Target: scaffold0038 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 31428 - 31239
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaa-gttatttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||  || |||||||||| ||| ||||    
T  31428 caaatactatcgaagtagtaaaaatatcgtt-ccacaaggactgattttaatctcaataattcaattacgttgtaacttaagatgtataaaagttctttt 31330  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
      |||||  |||   ||||||||| |||||||||||  ||  ||  ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  31329 aatttgccgctagacagttgattgatttgtttgcat--aagcaataacagaaaataaagattggtttaaagaataagatagagatgagtttag 31239  T

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Target: scaffold0126 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 24 - 205
Target Start/End: Original strand, 14112 - 14292
Alignment:
Q  24 actatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtataaag-ttattttgtttt 122  Q
    |||||||||||||||||||||||  | ||||||| | || ||||||||| |||||||||||||||  ||||| |||||||||||||| || ||||  |||    
T  14112 actatcgaagtagtaaaaatatctatcccacaaggattggttttaatctcaataattcaattacgtcgtaaattaggatgtataaagattcttttaattt 14211  T
Q  123 gctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagagatgag 205  Q
     | |||| | |||||||||||||||||||||  ||  ||  |||||||||||||||||||||||||||||| |||||||||||    
T  14212 tccactaggcagttgattggtttgtttgcat--aagcaataacagaaaataaagattggttttaagaataaaagagagatgag 14292  T

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Target: scaffold0066 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 57453 - 57562
Alignment:
Q  97 taggatgtataaa-gttattttgttttgctactaagtagttgattggtttgtttgcataaaactaaagacagaaaataaagattggtttt-aagaataag 194  Q
    ||||||||||||| |||||||||||||||||||| | |||||||||||||| |||||||||| ||| |||| ||||||| |||||||||| |||||||||    
T  57453 taggatgtataaaagttattttgttttgctactaggcagttgattggtttgattgcataaaagtaacgaca-aaaataaggattggttttaaagaataag 57551  T
Q  195 agagagatgag 205  Q
    |||||||||||    
T  57552 agagagatgag 57562  T

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Target: scaffold0056 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 65110 - 65301
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccacaagaactgattttaatcttaataattcaattacggtgtaaaataggatgtat-aaagttatttt 117  Q
    ||||||||||| ||||||||||||||||||| |||| |  |||| ||||||||| |||| ||||||| || ||||||||||||||||| |||||| ||||    
T  65110 caaatactatccaagtagtaaaaatatcgttcccacgatgactgtttttaatctcaatatttcaattgcgttgtaaaataggatgtataaaagttctttt 65209  T
Q  118 gttttgctactaagtagttgattggtttgtttgcataaaactaa-agacagaaaataaagattggttttaagaataagagagagatgagtttag 210  Q
    | ||||| |||| | | ||||||| || | |||||||||| |||   |||| |||||| | || || |||||||||||||||||||||||||||    
T  65210 gatttgccactaggaatttgattgattcgattgcataaaattaactaacag-aaataatg-tttgtgttaagaataagagagagatgagtttag 65301  T

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Target: scaffold0321 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 2854 - 2942
Alignment:
Q  114 ttttgttttgctactaagtagttgattggttt-gtttgcataaaactaaagacagaaaataaagattggttttaagaataagagagaga 201  Q
    ||||| ||||| |||| | ||||||||| ||| |||||||||||| ||| |||||||| |||||||||||||  |||||||||||||||    
T  2854 ttttgatttgccactaggaagttgattgtttttgtttgcataaaagtaatgacagaaattaaagattggtttagagaataagagagaga 2942  T

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Target: scaffold1208 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 514 - 472
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccacaagaactg 62  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  514 aaatactatcgaagtagtaaaaatatcgttcccacgagaactg 472  T

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Target: scaffold0250 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 19728 - 19693
Alignment:
Q  19 caaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  19728 caaatactatcgaagtagtaaaaatatcgttcccac 19693  T

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Target: scaffold0962 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 3073 - 3107
Alignment:
Q  20 aaatactatcgaagtagtaaaaatatcgtttccac 54  Q
    |||||||||||||||||||||||||||||| ||||    
T  3073 aaatactatcgaagtagtaaaaatatcgttcccac 3107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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