View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5464_high_7 (Length: 241)
Name: NF5464_high_7
Description: NF5464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5464_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 45500900 - 45501121
Alignment:
| Q |
1 |
cggtgctacttatgtgttccaagcagtggtcgtgcccattcatgtacatatcaacattgttggcctgcaaatttcattttaaaatgagagatgtttatcg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45500900 |
cggtgctacttatgtgttccaagcagtggtcgtgcccattcatgtacatatcaacattgttggcctgcaaatttcattttaaaatgagagatgtttatca |
45500999 |
T |
|
| Q |
101 |
gtaaataaaggacgatgcaccttatctttataactagtaggacagtatgagtactagttatatataatgagtgacctcaagaattggcaggaggtgtgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45501000 |
gtaaataaaggacgatgcaccttatctttataactagtaggacagtatgagtgctagttatatataatgagtgacctcaagaattggcaggaggtgtgtt |
45501099 |
T |
|
| Q |
201 |
aagagctctttggtgtcgccgt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
45501100 |
aagagctctttggtgtcgccgt |
45501121 |
T |
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