View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5465_high_10 (Length: 242)
Name: NF5465_high_10
Description: NF5465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5465_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 7945085 - 7945309
Alignment:
| Q |
1 |
catattaaatacttaatgttcagactgtagctgtgaagactctgaacagggatgggaatcagggaacaagagaattttttgcagaagttttaatgttgag |
100 |
Q |
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| T |
7945085 |
catattaaatactcaatgttcagactgtagctgtgaagactctgaacagggatgggaatcagggaacaagagaatttttcgcagaagttttaatgttgag |
7945184 |
T |
|
| Q |
101 |
tatggtgaatcatccaaacctagtgaagcttgttggttattgtgtagaagatgatcaaaggattttagtttatgagtacatgaccaatggaagcttggaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
7945185 |
tatggtgaatcatccaaacctagtgaagcttgttggttattgtgtagaagatgatcaaaggattttagtttacgagtacatgaccaatggaagcttggaa |
7945284 |
T |
|
| Q |
201 |
gatcaccttcttggtaggtagtagt |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
7945285 |
gatcaccttcttggtaggtagtagt |
7945309 |
T |
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