View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5466-Insertion-2 (Length: 792)
Name: NF5466-Insertion-2
Description: NF5466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5466-Insertion-2 |
 | |
|
| [»] scaffold1439 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 596; Significance: 0; HSPs: 37)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 596; E-Value: 0
Query Start/End: Original strand, 8 - 789
Target Start/End: Complemental strand, 22458641 - 22457870
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458641 |
ttgatgatgtatggagcttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
22458542 |
T |
|
| Q |
108 |
tgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458541 |
tgttgcaaatgcatgtaagaaatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattc |
22458442 |
T |
|
| Q |
208 |
cacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtg |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458441 |
cacgacttaaacggacgttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtg |
22458342 |
T |
|
| Q |
308 |
gtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgt |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22458341 |
gtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgt |
22458242 |
T |
|
| Q |
408 |
aggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgatt |
507 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22458241 |
aggtctcggttaccatgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgatt |
22458142 |
T |
|
| Q |
508 |
cggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttg |
607 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458141 |
cggcaatggatggctgaaggatttgtgaaagatgatatggtaaaaacattgg-aagatgttgcagatggatatttaacagatttgatcagtagaggtttg |
22458043 |
T |
|
| Q |
608 |
gtgcaagtagtttcaattagtattgatggaaagagcaaaaagttggttgtgttcatgatctagtccatggcattggatcctttgaaaaaatgtgaagaat |
707 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| || ||| ||||| ||||||| |||||||||||||| |
|
|
| T |
22458042 |
gtgcaagtagtttcaattagtattgatgg-aagagcaaaaagtt-gttgtgttcatgatctggtgcat-gcatt-gatcctt--gaaaaatgtgaagaa- |
22457950 |
T |
|
| Q |
708 |
ttaagttttttgcaagaatattagcgaggatgacc-atcatcttttaagtgggatgggttcgacgcctatcaatagcattcag |
789 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
22457949 |
ttaag-tttttgcaagaatattagcgaggatgaccaatcatc-tttaagtgggat-ggttcgacgcctatcaatagcaatcag |
22457870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 596; E-Value: 0
Query Start/End: Original strand, 8 - 789
Target Start/End: Complemental strand, 22481622 - 22480851
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481622 |
ttgatgatgtatggagcttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
22481523 |
T |
|
| Q |
108 |
tgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481522 |
tgttgcaaatgcatgtaagaaatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattc |
22481423 |
T |
|
| Q |
208 |
cacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtg |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481422 |
cacgacttaaacggacgttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtg |
22481323 |
T |
|
| Q |
308 |
gtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgt |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22481322 |
gtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgt |
22481223 |
T |
|
| Q |
408 |
aggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgatt |
507 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22481222 |
aggtctcggttaccatgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgatt |
22481123 |
T |
|
| Q |
508 |
cggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttg |
607 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481122 |
cggcaatggatggctgaaggatttgtgaaagatgatatggtaaaaacattgg-aagatgttgcagatggatatttaacagatttgatcagtagaggtttg |
22481024 |
T |
|
| Q |
608 |
gtgcaagtagtttcaattagtattgatggaaagagcaaaaagttggttgtgttcatgatctagtccatggcattggatcctttgaaaaaatgtgaagaat |
707 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| || ||| ||||| ||||||| |||||||||||||| |
|
|
| T |
22481023 |
gtgcaagtagtttcaattagtattgatgg-aagagcaaaaagtt-gttgtgttcatgatctggtgcat-gcatt-gatcctt--gaaaaatgtgaagaa- |
22480931 |
T |
|
| Q |
708 |
ttaagttttttgcaagaatattagcgaggatgacc-atcatcttttaagtgggatgggttcgacgcctatcaatagcattcag |
789 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
22480930 |
ttaag-tttttgcaagaatattagcgaggatgaccaatcatc-tttaagtgggat-ggttcgacgcctatcaatagcaatcag |
22480851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 8 - 676
Target Start/End: Complemental strand, 22358154 - 22357489
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| |||||| | | |||||||| | ||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||| |
|
|
| T |
22358154 |
ttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatgga |
22358055 |
T |
|
| Q |
108 |
tgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
|||| | ||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
22358054 |
tgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattc |
22357955 |
T |
|
| Q |
208 |
cacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtg |
307 |
Q |
| |
|
|| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||| |
|
|
| T |
22357954 |
catgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtg |
22357855 |
T |
|
| Q |
308 |
gtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgt |
407 |
Q |
| |
|
|||||||| || |||||||| || | || |||||||||||||||||||||| | ||||| ||||||| | ||| ||| | || || | |
|
|
| T |
22357854 |
gtattttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaaatttt |
22357755 |
T |
|
| Q |
408 |
aggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgatt |
507 |
Q |
| |
|
||| | |||||||||||||| ||||| | |||||||||||||| ||||||||||||||||||||||||| | || ||||| | |||| | ||||| | |
|
|
| T |
22357754 |
aggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattgact |
22357655 |
T |
|
| Q |
508 |
cggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttg |
607 |
Q |
| |
|
|| |||||||| |||||||| || |||||| | || | | || ||| ||| |||| |||||||| |||||||||| ||| || || |||| ||||| |
|
|
| T |
22357654 |
cgacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatgg-aagaggttgcagaaggatatttaaaagagttaatacatagaagtttg |
22357556 |
T |
|
| Q |
608 |
gtgcaagtagtttcaattagtattgatggaaagagcaaaaagttggttgtgttcatgatctagtccatg |
676 |
Q |
| |
|
|||||||||| |||||| ||||||||||| ||||| |||| ||| || |||||||||||||||| |||| |
|
|
| T |
22357555 |
gtgcaagtagattcaatcagtattgatgg-aagagtaaaacgtt-gtcgtgttcatgatctagtgcatg |
22357489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 8 - 676
Target Start/End: Complemental strand, 22442891 - 22442229
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| |||||| | | |||||||| | ||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||| |
|
|
| T |
22442891 |
ttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatgga |
22442792 |
T |
|
| Q |
108 |
tgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||| || ||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22442791 |
tgttgcaaatacttgtaagaaatcttcttttgtt------tacgaactaaaaggtttgactgtagaacaatctttggagttgttcaataagaaggcattt |
22442698 |
T |
|
| Q |
208 |
cacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtg |
307 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
22442697 |
catgacttaaacggacgttgtccaaaaaatcttattggtatatcttccaaaattgttgaaaaatgcaatggattaccactagcaattgtagtcattggtg |
22442598 |
T |
|
| Q |
308 |
gtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatag---agttaaaagaagatttgaagatnnnnnnnnt |
404 |
Q |
| |
|
|||||||| || |||||||||||||||| ||||||||| |||||| ||||| | ||||| || |||| || ||| ||| | | | |
|
|
| T |
22442597 |
gtattttagctcccaaagatagaaatacaattgaatggtatgagtttaatgaaaatataaatgcagatcagtttaaggaatattccatagtaagaaaaat |
22442498 |
T |
|
| Q |
405 |
tgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattg |
504 |
Q |
| |
|
| |||| ||| |||||||||||||| ||| ||| |||||||||||||| |||||||||||||||||||| |||| | | || | | |||| | |||| |
|
|
| T |
22442497 |
tttaggactcagttaccatgatttgccttgcaacctcaagtcatgtttcttgtattttggattatatcccgaagactatgaagcttgttcaaagacattg |
22442398 |
T |
|
| Q |
505 |
attcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggt |
604 |
Q |
| |
|
| ||| |||||||| |||||||| || |||||||| || | | || |||||||||| | |||||||| |||||||||| || || ||| ||||| || |
|
|
| T |
22442397 |
actcgtcaatggatagctgaagggtttgtgaaagaatatggggaaaggacattggaaa-aggttgcagaaggatatttaaaagtgttaatctgtagaagt |
22442299 |
T |
|
| Q |
605 |
ttggtgcaagtagtttcaattagtattgatggaaagagcaaaaagttggttgtgttcatgatctagtccatg |
676 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||| |||||||| | |||||||||||||||| |||| |
|
|
| T |
22442298 |
ttggtgcaagtagtttcaaccagtattgatgg-aagagtaaaaagtt-gccgtgttcatgatctagtgcatg |
22442229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 617
Target Start/End: Complemental strand, 22368079 - 22367468
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| |||||| ||| |||||||||| ||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
22368079 |
ttgatgatgtatgggactcacatttttggaatgatattgaattttctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacgagga |
22367980 |
T |
|
| Q |
108 |
tgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||||| || |||| ||||||| ||||||| ||||||| || ||||||||||||||| | ||| |
|
|
| T |
22367979 |
tgttgcagatgcttgtaagaaatcttcttttgttgaagtgcataaacttgaaggtttaagtgaagaaaaatctttagaattgttcaataagaaggcgttc |
22367880 |
T |
|
| Q |
208 |
cacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtg |
307 |
Q |
| |
|
|| ||||| | |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |
|
|
| T |
22367879 |
catgacttgagcggatattgtccagaaaatcttattgatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtg |
22367780 |
T |
|
| Q |
308 |
gtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatag---agttaaaagaagatttgaagatnnnnnnnnt |
404 |
Q |
| |
|
|||||||| ||||||||||||| ||| || ||||||| |||||||||||||| | ||||| || ||| ||| ||| ||| | ||| | |
|
|
| T |
22367779 |
gtattttagcttgcaaagataggaatccaattgaatggtctaagtttagtgaaaatataaatgcagatcagtcaaaggaatattccatgataaaaaaaat |
22367680 |
T |
|
| Q |
405 |
tgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattg |
504 |
Q |
| |
|
| |||| || |||||||||||||| ||| ||| |||||||||||||| ||||| ||||||||||||||||||| | | |||| | ||||||||||| |
|
|
| T |
22367679 |
tctaggacttagttaccatgatttgccttgcaacctcaagtcatgtttcttgtactttggattatatcctgaagactcaaatgttcgttcaaatatattg |
22367580 |
T |
|
| Q |
505 |
attcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggt |
604 |
Q |
| |
|
| ||| |||||||| |||||||| || |||||||| || || | || ||||||| |||| |||||||| ||| |||||| ||| |||||| ||||| || |
|
|
| T |
22367579 |
actcgtcaatggattgctgaagggtttgtgaaagaagaaaggggaatgacattgg-aagaggttgcagaaggacatttaatagagttgatccgtagaagt |
22367481 |
T |
|
| Q |
605 |
ttggtgcaagtag |
617 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
22367480 |
ttggtgcgagtag |
22367468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 676
Target Start/End: Complemental strand, 22436778 - 22436118
Alignment:
| Q |
16 |
gtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaa |
115 |
Q |
| |
|
|||||||||||| || ||||| ||||||| ||||||||||||||||||| ||| |||| |||| |||||||||||||||| || ||| ||||| ||| |
|
|
| T |
22436778 |
gtatggaacttaaatatttggaatgatattgaatttgctatgattgataacttaaatggttctaaggtattaatcacaacaaggaaaatgaatgttgcaa |
22436679 |
T |
|
| Q |
116 |
atgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgactt |
215 |
Q |
| |
|
|| ||| ||||| |||||||||||||||||| ||||||| ||||||| |||||||| ||||||| || ||||||||||||||| ||||||| |||| |
|
|
| T |
22436678 |
attcttttaagagatcttcttttgttgaagtacatgaacttcaaggtttaactgaagaaaaatctttagaattgttcaataagaaggcattccataactt |
22436579 |
T |
|
| Q |
216 |
aaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtatttta |
315 |
Q |
| |
|
| ||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||| || |||||||||||| ||| ||||||| ||||| |
|
|
| T |
22436578 |
gagtggatgttgtccacaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtctttta |
22436479 |
T |
|
| Q |
316 |
tcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatag---agttaaaagaagatttgaagatnnnnnnnnttgtaggtc |
412 |
Q |
| |
|
|||||||||||||||||| | | |||||||| ||||||||||||| | ||||| || ||| ||| ||| ||| | || || |||| |
|
|
| T |
22436478 |
tcttgcaaagatagaaatcctactgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggat |
22436379 |
T |
|
| Q |
413 |
tcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggca |
512 |
Q |
| |
|
| |||||||||||||| ||||| | |||||||| ||||| ||||||||||||||||||||||||| | |||||||| | |||| | ||||| ||| || |
|
|
| T |
22436378 |
ttagttaccatgatttgccttactacctcaagtcgtgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgactcgcca |
22436279 |
T |
|
| Q |
513 |
atggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgca |
612 |
Q |
| |
|
|||||| |||||||| ||||||||||| || || | || ||||||| ||||| ||||| | |||||||||| ||| ||| ||| |||| |||||||||| |
|
|
| T |
22436278 |
atggattgctgaagggttcgtgaaagaagagaggggaaggacattgg-aagatattgcaaaaggatatttaatagagttggtcaatagaagtttggtgca |
22436180 |
T |
|
| Q |
613 |
agtagtttcaattagtattgatggaaagagcaaaaagttggttgtgttcatgatctagtccatg |
676 |
Q |
| |
|
||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| |||| |||| |
|
|
| T |
22436179 |
tgtagtttcaataagtattgatgg-aagagtaaaaagtt-gtcgtgttcatgatttagtgcatg |
22436118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 8 - 361
Target Start/End: Complemental strand, 22431325 - 22430972
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| |||||| | | | |||||||| ||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
22431325 |
ttgatgatgtatgggagtcaaatttttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacaagga |
22431226 |
T |
|
| Q |
108 |
tgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
|| | | |||||||||||||||||||||||||||||||| ||||||| |||||||| | |||||| ||||||| || |||||||||||||| ||| |
|
|
| T |
22431225 |
tggtgtagatgcttgtaagaaatcttcttttgttgaagtgcatgaacttaaaggtttaaccgaagaaaaatctttagaattgttcaataagaaagtgttc |
22431126 |
T |
|
| Q |
208 |
cacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtg |
307 |
Q |
| |
|
|| ||||| | |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |
|
|
| T |
22431125 |
catgacttgagcggatattgtccagaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtg |
22431026 |
T |
|
| Q |
308 |
gtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaa |
361 |
Q |
| |
|
|||||||| ||||||||||||| ||| || ||||||| |||||||||||||| |
|
|
| T |
22431025 |
gtattttagcttgcaaagataggaatccaattgaatggtctaagtttagtgaaa |
22430972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 8 - 676
Target Start/End: Complemental strand, 22468100 - 22467438
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| |||||| | | |||||||||| ||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| || |
|
|
| T |
22468100 |
ttgatgatgtatgggattcacatttttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacgagaaacaaggt |
22468001 |
T |
|
| Q |
108 |
tgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
|||| || |||||||||||||||||| ||| | ||||| |||| ||| || |||| |||||||||| || ||||| ||||| || |||||| | ||| |
|
|
| T |
22468000 |
tgttgcagatgcttgtaagaaatctt---ttggtaaagtgcatgagctggaacgtttatctgaagaacagtccttggaattgtttaaaaagaaggcgttc |
22467904 |
T |
|
| Q |
208 |
cacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtg |
307 |
Q |
| |
|
|| ||||| ||||| |||||||||||||||| |||| |||||||| |||||||||||||| ||||| ||||| || ||||||||||| ||| |||| |
|
|
| T |
22467903 |
catgacttggacggagtttgtccagaaaatctttttgacatatcttccaaaattgttgaaaactgcaaaggattacctctagcaattgttgtcaccggtg |
22467804 |
T |
|
| Q |
308 |
gtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgt |
407 |
Q |
| |
|
|||||||||| ||||| |||||||| || ||||||| ||| |||||||||| | ||||| |||||||| | | | ||| | || || | |
|
|
| T |
22467803 |
atattttatctcgcaaaaatagaaatccaattgaatggtctaaatttagtgaaaatataaatgtagagttagagggatattccacaataagaaaaatttt |
22467704 |
T |
|
| Q |
408 |
aggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgatt |
507 |
Q |
| |
|
||| | |||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||||||||| | |||||||| | |||| | |||| | |
|
|
| T |
22467703 |
aggatttagttaccataatttaccttacaacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcattcaaagacgttgact |
22467604 |
T |
|
| Q |
508 |
cggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttg |
607 |
Q |
| |
|
|| |||||||| |||||||| || ||||| || || || | | ||||||| |||| ||||| || |||||||||| ||| |||||| |||| ||||| |
|
|
| T |
22467603 |
cgccaatggattgctgaagggtttgtgaaggaagacagggggaggacattgg-aagaggttgctgaaggatatttaatagagttgatccatagaagtttg |
22467505 |
T |
|
| Q |
608 |
gtgcaagtagtttcaattagtattgatggaaagagcaaaaagttggttgtgttcatgatctagtccatg |
676 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||| |||||||| || |||||||||||||||| |||| |
|
|
| T |
22467504 |
gtgcaagtagtttcaataagtattgatgg-aagagtaaaaagtt-gtcgtgttcatgatctagtgcatg |
22467438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 31 - 676
Target Start/End: Complemental strand, 22630567 - 22629930
Alignment:
| Q |
31 |
ttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaagaaat |
130 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||| |
|
|
| T |
22630567 |
ttttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacaaggatgttgcagatgcttgtaagaaat |
22630468 |
T |
|
| Q |
131 |
cttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtcc |
230 |
Q |
| |
|
||| ||| ||||| |||| ||| || |||| |||||||||| |||||||| ||||| || ||||| | ||||| ||||| | ||| |||||| |
|
|
| T |
22630467 |
ctt---ttggcaaagtgcatgagctggaacgtttatctgaagaacagtctttggaattgtttaaaaagaaagcgttccatgacttggatggattttgtcc |
22630371 |
T |
|
| Q |
231 |
agaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagataga |
330 |
Q |
| |
|
|||||||||| |||| |||||||| |||||||||||||||||||| ||||| || |||||||||||| ||| |||| |||||||||| |||||| |||| |
|
|
| T |
22630370 |
agaaaatctttttgacatatcttccaaaattgttgaaaaatgcaaaggattacctctagcaattgtagtcaccggtgatattttatctcgcaaagttaga |
22630271 |
T |
|
| Q |
331 |
aatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgt |
430 |
Q |
| |
|
||| || ||||||| |||||||||||||| | ||||| |||||||| | ||| ||| | || | |||| | ||||||||||||| |
|
|
| T |
22630270 |
aatccaattgaatggtctaagtttagtgaaaatataaatgtagagttagaggaatattccacaataagaaaaaatttaggatttagttaccatgatttac |
22630171 |
T |
|
| Q |
431 |
cttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggatt |
530 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||| |||||||||| | |||||||| | |||| | |||| ||| |||||||| |||||||| || |
|
|
| T |
22630170 |
cttacaacctcaagtcatgtttcttgtattttggattctatcctgaagactatatagttcgttcaaaggtgttgactcgccaatggatcgctgaagggtt |
22630071 |
T |
|
| Q |
531 |
cgtgaaagatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtat |
630 |
Q |
| |
|
|||||||| | | | || |||||||| |||| |||| ||| |||||||||| ||| ||| || ||||| ||||||||||||||||||||| ||||| |
|
|
| T |
22630070 |
tgtgaaagaagtcaagggaagaacattgg-aagaggttggagaaggatatttaatagagttggtccgtagaagtttggtgcaagtagtttcaacaagtat |
22629972 |
T |
|
| Q |
631 |
tgatggaaagagcaaaaagttggttgtgttcatgatctagtccatg |
676 |
Q |
| |
|
|||| ||||| |||||||| || |||| ||||||||||| |||| |
|
|
| T |
22629971 |
--atgg-aagagtaaaaagtt-gtcgtgtacatgatctagtgcatg |
22629930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 8 - 652
Target Start/End: Complemental strand, 22635655 - 22635016
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| |||||| | | |||||||||| |||||| ||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| | ||| |
|
|
| T |
22635655 |
ttgatgatgtatgggagtcacatttttggtctgatattgaatttgctatgattgataacaaaaatagttgtaggatattaatcacaacaagaaaaaagga |
22635556 |
T |
|
| Q |
108 |
tgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
|||| ||||||||||||| ||||||| ||| | ||||| || | ||| || |||| ||||| ||||||||||||| ||||| |||||| | || |
|
|
| T |
22635555 |
tgttgcaaatgcttgtaataaatctt---ttggtaaagtgcataatctggaacgtttatctgaaaaacaatctttggaattgtttctaaagaaggcgctc |
22635459 |
T |
|
| Q |
208 |
cacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtg |
307 |
Q |
| |
|
|| | ||| |||| || ||| ||| ||||||||||||||||||| |||||||| ||||||||||| ||||| || |||||||||||| ||||||||| |
|
|
| T |
22635458 |
catggcttggacggcatttttcctgaatatcttattgatatatcttccaaaattgtcgaaaaatgcaaaggattacctctagcaattgtagtcattggtg |
22635359 |
T |
|
| Q |
308 |
gtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgt |
407 |
Q |
| |
|
|||| ||||| ||| ||||||||| || |||||||| ||||||||||||| | ||||| ||||||| | ||| ||| | ||| || | |
|
|
| T |
22635358 |
atattctatctcgcacggatagaaattcaatagaatggtcgaagtttagtgaaaatataaatgcagagttagaggaatattccatgataagaaaaatttt |
22635259 |
T |
|
| Q |
408 |
aggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgatt |
507 |
Q |
| |
|
||| || |||||||||||||| | | | | |||||||||||||| ||||||||||||||||||||||||| | |||||||| | |||| | ||||| | |
|
|
| T |
22635258 |
aggacttagttaccatgatttgccatgctacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgact |
22635159 |
T |
|
| Q |
508 |
cggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttg |
607 |
Q |
| |
|
|| |||||||| |||||||| ||||||||||| || || | || ||||| | |||| |||||||| ||||||||| ||| |||||| |||| ||||| |
|
|
| T |
22635158 |
cgccaatggattgctgaagggttcgtgaaagaagacaggggaaggacatttg-aagaggttgcagaaggatatttagtagagttgatccatagaagtttg |
22635060 |
T |
|
| Q |
608 |
gtgcaagtagtttcaattagtattgatggaaagagcaaaaagttg |
652 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||| ||||||||| |
|
|
| T |
22635059 |
gtgcaagtagtttcaactagtattgatgg-aagagtaaaaagttg |
22635016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 47 - 730
Target Start/End: Complemental strand, 22353923 - 22353251
Alignment:
| Q |
47 |
aatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagt |
146 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| || ||| |||||||||||||| | | | |||| |
|
|
| T |
22353923 |
aatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacaaggatgttacagatgattgtaagaaatctt---tcggtaaagt |
22353827 |
T |
|
| Q |
147 |
gtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgat |
246 |
Q |
| |
|
| |||| ||| || |||| ||||| ||||||||||||| ||||| || |||||| | |||| ||||| ||||| ||||||| |||||||| || || |
|
|
| T |
22353826 |
gcatgagctggaacgtttatctgaaaaacaatctttggatttgtttaaaaagaaggcgttccgtgacttggacggattttgtccaaaaaatcttttttat |
22353727 |
T |
|
| Q |
247 |
atatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggt |
346 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||| || || ||||||||| |||| ||| |||||||||| |||||||||||||| || ||||||| |
|
|
| T |
22353726 |
atatcttccgaaattattgaaaaatgcaaaggattacctctcgcaattgtagtcataggtaatattttatctcgcaaagatagaaatccaattgaatggt |
22353627 |
T |
|
| Q |
347 |
ataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtc-ttacaatctcaagt |
445 |
Q |
| |
|
|||||||||||||| | ||||| ||||||| | ||| ||| | || || |||| | |||||||||||||| | |||| | ||||||| |
|
|
| T |
22353626 |
ctaagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgatttgcctttactacctcaagt |
22353527 |
T |
|
| Q |
446 |
catgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatag |
545 |
Q |
| |
|
||||||| ||||||||||||||||||| |||| | |||| | || ||| ||||| ||| |||||||| ||||| || || |||||||| | | |
|
|
| T |
22353526 |
catgtttcttgtattttggattatatctcgaagactacgaagtttattcagatacattgactcgtcaatggattgctgaggggtttgtgaaagaatacgg |
22353427 |
T |
|
| Q |
546 |
cgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaaagagcaa |
645 |
Q |
| |
|
| || ||| ||| |||| |||||||| |||||||||| ||| || ||| |||| ||||||||||||||| |||| | ||||||||||| ||||| || |
|
|
| T |
22353426 |
gggaaggacaatgg-aagaggttgcagaaggatatttaaaagagttaatccatagaagtttggtgcaagtagattcagtcagtattgatgg-aagagtaa |
22353329 |
T |
|
| Q |
646 |
aaagttggttgtgttcatgatctagtccatggcattggatcctttgaaaaaatgtgaagaatttaagttttttgcaagaatatta |
730 |
Q |
| |
|
|||||| || ||||||| |||||||| |||| || ||||||| ||||| ||| || ||||||| ||||||||||||||||| |
|
|
| T |
22353328 |
aaagtt-gtcgtgttcacgatctagtgcatgaaat--gatccttagaaaatatg---aggatttaag-tttttgcaagaatatta |
22353251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 416 - 676
Target Start/End: Complemental strand, 22430914 - 22430657
Alignment:
| Q |
416 |
gttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
515 |
Q |
| |
|
|||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| ||| | ||||||| | |||| | ||| | | | ||||| |
|
|
| T |
22430914 |
gttaccatgatttgccttgcaacctcaagtcatgtttcttgtattttggattatatcctaaagactatatagtttattcaaagacattaacttgtcaatg |
22430815 |
T |
|
| Q |
516 |
gatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagt |
615 |
Q |
| |
|
||| |||||||| || |||||||| | | | || |||||| ||||| |||||||| |||||||||| ||| |||||| |||| ||||||||||||| |
|
|
| T |
22430814 |
gattgctgaagggtttgtgaaagaaaaaacgggaaggacattg-aaagaggttgcagaaggatatttaatagagttgatccatagaagtttggtgcaagt |
22430716 |
T |
|
| Q |
616 |
agtttcaattagtattgatggaaagagcaaaaagttggttgtgttcatgatctagtccatg |
676 |
Q |
| |
|
|| |||||| ||||||||||| ||||| || ||||| || |||||||||||||||| |||| |
|
|
| T |
22430715 |
agattcaataagtattgatgg-aagagtaagaagtt-gtcgtgttcatgatctagtgcatg |
22430657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 56 - 318
Target Start/End: Complemental strand, 22621018 - 22620753
Alignment:
| Q |
56 |
tgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaact |
155 |
Q |
| |
|
|||||||||||||||| || |||||||||| || |||||||||| ||||||||| | | | |||||| |||||||||||| |||| ||| ||||||| |
|
|
| T |
22621018 |
tgattgataataaaaatgggagtaagatattgattacaacaagaagtatggatgttgctatttattgtaaaaaatcttcttttattgaggtgcatgaact |
22620919 |
T |
|
| Q |
156 |
gaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattcc---acgacttaaacggacgttgtccagaaaatcttattgatatatct |
252 |
Q |
| |
|
|| ||| |||| ||||||||||| |||||||||||||||||| ||| | ||||| | ||| |||||||| || |||| |||||||||||| |
|
|
| T |
22620918 |
acaacctttaactgaggaacaatcttttgagttgttcaataagaaggtatttcgatttgactttgatggaagttgtccaaaagatctaattgatatatct |
22620819 |
T |
|
| Q |
253 |
tcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatct |
318 |
Q |
| |
|
|| |||||| | ||||||||| || || ||||||||||||||| | |||||||| |||||||| |
|
|
| T |
22620818 |
tccgaaattgctagaaaatgcaagggtttaccactagcaattgtagccgttggtggtcttttatct |
22620753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 445 - 669
Target Start/End: Complemental strand, 22620599 - 22620378
Alignment:
| Q |
445 |
tcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgata |
544 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||| || || |||| | |||| | |||||||||||||||||| |||||||| || || ||||| || | |
|
|
| T |
22620599 |
tcatgtttattgtattttggattatatccagaagattataaagttgattcaaagagattgattcggcaatggatagctgaagggtttgtaaaagaagaaa |
22620500 |
T |
|
| Q |
545 |
gcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaaagagca |
644 |
Q |
| |
|
| | || || |||| |||| |||||||| ||||| |||||||| |||||| |||| |||||||||||||| |||| | || || |||||||| | || |
|
|
| T |
22620499 |
gggggaatactttgg-aagaagttgcagaaggatacttaacagagttgatccatagaagtttggtgcaagtatcttcactaagaatcgatggaaa-aaca |
22620402 |
T |
|
| Q |
645 |
aaaagttggttgtgttcatgatcta |
669 |
Q |
| |
|
||||||| |||| |||||||||||| |
|
|
| T |
22620401 |
aaaagtt-gttgcgttcatgatcta |
22620378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 26 - 207
Target Start/End: Complemental strand, 30989439 - 30989258
Alignment:
| Q |
26 |
tacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaa |
125 |
Q |
| |
|
||||||||||||||||||| |||||||| | |||||||||||||| || |||||||||| ||||||||||||||| | |||||| ||||||| |
|
|
| T |
30989439 |
tacatttttgggatgatattgaatttgctgtaattgataataaaaatggaagtaagatatttatcacaacaagaaacctagatgttgtgttgtcttgtaa |
30989340 |
T |
|
| Q |
126 |
gaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
|||||||||| | |||||||| ||| || || ||| |||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30989339 |
aaaatcttcttatattgaagtgcttgagttgcaacctttaaatgaacaacaatctttggagttgttcaataagaaggcattc |
30989258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 56 - 206
Target Start/End: Complemental strand, 22648288 - 22648138
Alignment:
| Q |
56 |
tgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaact |
155 |
Q |
| |
|
|||||||||||||||| || |||||||||| || ||||||||||| ||||||||| | | |||||||||||||||||| |||||||||||||| | |
|
|
| T |
22648288 |
tgattgataataaaaatgggagtaagatatttattacaacaagaaatatggatgttgccatatattgtaagaaatcttctttcattgaagtgtatgaatt |
22648189 |
T |
|
| Q |
156 |
gaaaggtttggctgaagaacaatctttggagttgttcaataagaagacatt |
206 |
Q |
| |
|
| || ||| | | ||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
22648188 |
gcaacctttaacaaatgaacaatcttttgagttgttcaacaagaagacatt |
22648138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 416 - 616
Target Start/End: Complemental strand, 30989037 - 30988838
Alignment:
| Q |
416 |
gttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
515 |
Q |
| |
|
||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||||| |||| || | |||| |||| | ||||||||| ||||| |
|
|
| T |
30989037 |
gttacgatgatttgccttactctctcaagtcatgcttgttgtattttggaatatatccagaagattatgaagttaaatcaaagagattgattcgacaatg |
30988938 |
T |
|
| Q |
516 |
gatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagt |
615 |
Q |
| |
|
| | |||||||| |||||||| || || || | || || |||| |||| |||||||| |||||||||||||| |||||| |||| | ||||||||||| |
|
|
| T |
30988937 |
ggtagctgaagggttcgtgaaggaggaaagagggaagactttgg-aagacgttgcagaaggatatttaacagagttgatccatagaagcttggtgcaagt |
30988839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 22034831 - 22035030
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| || ||||| ||||||||||||||||||| ||||| || | ||||||| |||||| || |||||||||| || ||||||||||||||||| |
|
|
| T |
22034831 |
ttgatgatgtttggaatgtacatttttgggatgatattgaattttctgtaattgatagtaaaaatggaagtaagatatttataacaacaagaaacatgga |
22034930 |
T |
|
| Q |
108 |
tgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
|||| ||||||| ||||||||||| |||| ||| ||| ||| || ||| || |||||||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
22034931 |
tgttgtgttgtcttgtaaaaaatcttctttcattgaggtgcttgagctgcaacctttaactcaagaacaatcattgaagttgttcaataagaaggcattc |
22035030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 22615420 - 22615222
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| ||||||||| | ||||||||| |||| || ||| |||| | |||||||||||||| || |||||||||| || |||||||| || || || |
|
|
| T |
22615420 |
ttgatgatgtatggaacatgcatttttggaatgagattgaatctgctgtaattgataataaaaatggaagtaagatatttataacaacaaggaatataga |
22615321 |
T |
|
| Q |
108 |
tgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacatt |
206 |
Q |
| |
|
|||| || | ||||||||| |||||| || || ||||| |||| || || ||| |||||||||||||| |||||||||| ||||||||| |||| |
|
|
| T |
22615320 |
tgttgcactttcttgtaagagatcttcgttagtcaaagtgcatgagttgcaacctttaactgaagaacaatctctggagttgtttaataagaaggcatt |
22615222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 21945956 - 21946136
Alignment:
| Q |
26 |
tacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaa |
125 |
Q |
| |
|
||||||||||||||||| | ||||||||| ||||||| |||||| || ||| |||||| || |||||||| |||| | ||||| ||| ||||||| |
|
|
| T |
21945956 |
tacatttttgggatgattttaaatttgctgcaattgatagtaaaaatggaagtaggatatttataacaacaaggaacaagaatgttgtgaattcttgtaa |
21946055 |
T |
|
| Q |
126 |
gaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacatt |
206 |
Q |
| |
|
||||||||||| ||| ||| ||| ||| || |||| || |||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
21946056 |
aaaatcttctttcactgagatgtttgagctgcaatgtttaactcaagaacaatctttggagttgtttaataagaaggcatt |
21946136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 21930735 - 21930934
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| || ||||| ||||||||||||||||||| |||||||| ||||||| |||||| || |||||||||| || |||||||| |||||||| |
|
|
| T |
21930735 |
ttgatgatgtttggaatgtacatttttgggatgatattgaatttgctgcaattgatagtaaaaatggaagtaagatatttataacaacaaggaacatgga |
21930834 |
T |
|
| Q |
108 |
tgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
|||| ||||||| ||||||||||| ||||| || ||| || || ||| || | |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21930835 |
tgttgtggtgtcttgtaaaaaatcttctttcattgaaatgcttgagttgcaacctttaactcatgaacaatctttggagttgttcaataagaaggcattc |
21930934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 22115399 - 22115502
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| || ||||| ||||||||||||||||||| ||||| || | ||||||| |||||| || |||||||||| || ||||||||||||||||| |
|
|
| T |
22115399 |
ttgatgatgtttggaatgtacatttttgggatgatattgaattttctgtaattgatagtaaaaatggaagtaagatatttataacaacaagaaacatgga |
22115498 |
T |
|
| Q |
108 |
tgtt |
111 |
Q |
| |
|
|||| |
|
|
| T |
22115499 |
tgtt |
22115502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 553 - 676
Target Start/End: Complemental strand, 37930467 - 37930347
Alignment:
| Q |
553 |
acattggaaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaaagagcaaaaagttg |
652 |
Q |
| |
|
|||||||||| | ||||| || |||||||||| ||| || ||| ||||| ||||||||||||||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
37930467 |
acattggaaa-aggttgcggaaggatatttaaaagagttaatctgtagaagtttggtgcaagtagtttcaaccggtattgatgg-aagagtaaaaagtt- |
37930371 |
T |
|
| Q |
653 |
gttgtgttcatgatctagtccatg |
676 |
Q |
| |
|
|| |||||||||||||||| |||| |
|
|
| T |
37930370 |
gtcgtgttcatgatctagtgcatg |
37930347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 437 - 594
Target Start/End: Complemental strand, 22656777 - 22656621
Alignment:
| Q |
437 |
atctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaa |
536 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||| |||| || | |||| |||| | | |||| ||||||||||| |||||||| || ||||| |
|
|
| T |
22656777 |
atcttaagtcatgtttgttgtattttggaatatatccagaagattatgaagttgaatcaaagagagtgatacggcaatggatagctgaaggttttgtgaa |
22656678 |
T |
|
| Q |
537 |
agatgatagcgtaaaaacattggaaagatgttgcagatggatatttaacagatttgat |
594 |
Q |
| |
|
||| || || | ||||| |||||| || |||||||| |||||||||||||| ||||| |
|
|
| T |
22656677 |
agaagaaagggggaaaactttggaa-gaagttgcagaaggatatttaacagagttgat |
22656621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 422 - 473
Target Start/End: Original strand, 22180157 - 22180208
Alignment:
| Q |
422 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcc |
473 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22180157 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatatcc |
22180208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 422 - 478
Target Start/End: Original strand, 21937893 - 21937949
Alignment:
| Q |
422 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
478 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
21937893 |
atgatttgccttactatctcaagtcatgcttgttgtattttggagtatatccagaag |
21937949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 22115825 - 22115873
Alignment:
| Q |
422 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattata |
470 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
22115825 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtata |
22115873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 18967139 - 18967036
Alignment:
| Q |
8 |
ttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgga |
107 |
Q |
| |
|
||||||| || |||| |||||||||||||||||||| |||||| | | |||||||||||||| || |||| ||||| || |||||||| ||| |||| |
|
|
| T |
18967139 |
ttgatgatgtttggagtttacatttttgggatgatattgaatttgttgtaattgataataaaaaaggaagtaacatattgataacaacaaggaacctgga |
18967040 |
T |
|
| Q |
108 |
tgtt |
111 |
Q |
| |
|
|||| |
|
|
| T |
18967039 |
tgtt |
18967036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 21937485 - 21937666
Alignment:
| Q |
26 |
tacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaa |
125 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||| |||||| || ||| |||||| || |||||||| | || |||||| ||||||| |
|
|
| T |
21937485 |
tacatttttgggatgatatcgaatttgctggaattgatagtaaaaatggaagtaggatatttataacaacaaggataattgatgttgtggtgtcttgtaa |
21937584 |
T |
|
| Q |
126 |
gaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
||||||||||| ||||||| ||| || || |||| || | |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21937585 |
aaaatcttctttcattgaagttcttgagttgcaatgtttaactcatgaacaatctttggagttgttcaataagaaggcattc |
21937666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 22187424 - 22187501
Alignment:
| Q |
130 |
tcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
207 |
Q |
| |
|
||||||||| |||| ||| |||||||| || ||| || ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22187424 |
tcttcttttattgaggtgcatgaactgcaacctttatctctagaacaatctttggagttgttcaataagaaggcattc |
22187501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 478
Target Start/End: Original strand, 22028740 - 22028796
Alignment:
| Q |
422 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
478 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22028740 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22028796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 478
Target Start/End: Original strand, 22035257 - 22035313
Alignment:
| Q |
422 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
478 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22035257 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22035313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 478
Target Start/End: Original strand, 22053446 - 22053502
Alignment:
| Q |
422 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
478 |
Q |
| |
|
|||||||| ||||| ||||| ||||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22053446 |
atgatttgccttactatctcgagtcatgcttgttgtattttggagtatatccagaag |
22053502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 478
Target Start/End: Original strand, 22105448 - 22105504
Alignment:
| Q |
422 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
478 |
Q |
| |
|
|||||||| ||||| ||||||||||||| |||||||| |||||| ||||||| |||| |
|
|
| T |
22105448 |
atgatttgccttactatctcaagtcatgcttgttgtactttggagtatatccagaag |
22105504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 478
Target Start/End: Original strand, 22187728 - 22187784
Alignment:
| Q |
422 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
478 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22187728 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22187784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 22028436 - 22028506
Alignment:
| Q |
130 |
tcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaa |
200 |
Q |
| |
|
||||||||| |||| ||| |||||||| || ||| || |||||||||||||||||||||||||||||| |
|
|
| T |
22028436 |
tcttcttttattgaggtgcatgaactgcaacctttatctctagaacaatctttggagttgttcaataagaa |
22028506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 22179781 - 22179834
Alignment:
| Q |
58 |
attgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtt |
111 |
Q |
| |
|
||||||| |||||| || ||||||||||||| |||||||| |||||||||||| |
|
|
| T |
22179781 |
attgatagtaaaaatggaagtaagatattaataacaacaaggaacatggatgtt |
22179834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 2305615 - 2305490
Alignment:
| Q |
30 |
tttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaagaaa |
129 |
Q |
| |
|
|||||||||||| || ||| |||||||| |||| ||||||| ||| |||||||||| || || |||||||| ||||||||| | | |||||||||| |
|
|
| T |
2305615 |
tttttgggatgagattgaatatgctatgagtgatcataaaaatggtagtaagatatttattaccacaagaaatatggatgttgccatatattgtaagaaa |
2305516 |
T |
|
| Q |
130 |
tcttcttttgttgaagtgtatgaact |
155 |
Q |
| |
|
||||||||| || ||||| ||||||| |
|
|
| T |
2305515 |
tcttcttttattcaagtgcatgaact |
2305490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 668
Target Start/End: Complemental strand, 2305074 - 2304969
Alignment:
| Q |
561 |
aagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaaagagcaaaaagttggttgtgtt |
660 |
Q |
| |
|
|||| |||||||| ||||||||| |||| ||||| || || |||||||||||||| ||| |||| ||||||||||| | | ||||||| |||||||| |
|
|
| T |
2305074 |
aagaagttgcagaaggatatttatcagagttgattcgtcgaagtttggtgcaagtatcctcagttagcattgatggaaa-atctaaaagtt-gttgtgtt |
2304977 |
T |
|
| Q |
661 |
catgatct |
668 |
Q |
| |
|
|||||||| |
|
|
| T |
2304976 |
catgatct |
2304969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 668
Target Start/End: Original strand, 34976249 - 34976354
Alignment:
| Q |
561 |
aagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaaagagcaaaaagttggttgtgtt |
660 |
Q |
| |
|
|||| |||||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||||| | ||||||| |||||||| |
|
|
| T |
34976249 |
aagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaaag-cctaaaagtt-gttgtgtt |
34976346 |
T |
|
| Q |
661 |
catgatct |
668 |
Q |
| |
|
|||||||| |
|
|
| T |
34976347 |
catgatct |
34976354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 668
Target Start/End: Original strand, 34983360 - 34983465
Alignment:
| Q |
561 |
aagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaaagagcaaaaagttggttgtgtt |
660 |
Q |
| |
|
|||| |||||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||||| | ||||||| |||||||| |
|
|
| T |
34983360 |
aagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaaag-cctaaaagtt-gttgtgtt |
34983457 |
T |
|
| Q |
661 |
catgatct |
668 |
Q |
| |
|
|||||||| |
|
|
| T |
34983458 |
catgatct |
34983465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1439 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1439
Description:
Target: scaffold1439; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 1686 - 1547
Alignment:
| Q |
67 |
aaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttgg |
166 |
Q |
| |
|
||||| ||| |||||||||| || || |||||||| ||||||||| | ||||||||||||||||||| |||||||| ||||||| || ||| |
|
|
| T |
1686 |
aaaaatggtagtaagatatttattaccacaagaaatatggatgttgctgtgtattgtaagaaatcttcttttattgaagtgcatgaactacaacctttaa |
1587 |
T |
|
| Q |
167 |
ctgaagaacaatctttggagttgttcaataagaagacatt |
206 |
Q |
| |
|
|||||||| |||| || || ||||| ||||||||| |||| |
|
|
| T |
1586 |
ctgaagaaaaatcatttgatttgtttaataagaaggcatt |
1547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 872859 - 872774
Alignment:
| Q |
26 |
tacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtt |
111 |
Q |
| |
|
|||||||| ||||||||| |||||| | | ||||||||||||||||| |||||||||| |||||| ||| |||||| ||||| |
|
|
| T |
872859 |
tacattttatggatgatattgaatttgttgtaattgataataaaaagggaagtaagatatttatcacagcaatgaacatgaatgtt |
872774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 1234136 - 1234051
Alignment:
| Q |
26 |
tacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtt |
111 |
Q |
| |
|
|||||||| ||||||||| |||||| | | ||||||||||||||||| |||||||||| |||||| ||| |||||| ||||| |
|
|
| T |
1234136 |
tacattttatggatgatattgaatttgttgtaattgataataaaaagggaagtaagatatttatcacagcaatgaacatgaatgtt |
1234051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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