View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5468_high_24 (Length: 264)

Name: NF5468_high_24
Description: NF5468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5468_high_24
NF5468_high_24
[»] chr4 (83 HSPs)
chr4 (4-110)||(36629285-36629391)
chr4 (1-110)||(25483381-25483490)
chr4 (1-110)||(39792862-39792971)
chr4 (1-136)||(41370402-41370538)
chr4 (10-116)||(23817677-23817783)
chr4 (1-136)||(55933101-55933235)
chr4 (1-118)||(22028363-22028480)
chr4 (1-136)||(36608636-36608772)
chr4 (1-124)||(39404063-39404186)
chr4 (1-110)||(3340852-3340961)
chr4 (1-110)||(50630757-50630866)
chr4 (1-110)||(54017597-54017706)
chr4 (1-124)||(10245965-10246087)
chr4 (1-110)||(1731649-1731758)
chr4 (1-110)||(44621047-44621156)
chr4 (1-136)||(54342984-54343112)
chr4 (1-136)||(54936241-54936376)
chr4 (3-110)||(39404445-39404552)
chr4 (1-104)||(54108958-54109060)
chr4 (1-107)||(32941128-32941234)
chr4 (1-110)||(34646651-34646760)
chr4 (1-104)||(52884740-52884844)
chr4 (1-124)||(44620705-44620827)
chr4 (1-137)||(50002471-50002609)
chr4 (1-115)||(18932746-18932860)
chr4 (1-107)||(22027966-22028072)
chr4 (1-115)||(43827485-43827598)
chr4 (1-136)||(54108581-54108718)
chr4 (1-137)||(16889510-16889647)
chr4 (1-110)||(44620398-44620507)
chr4 (1-110)||(50459766-50459875)
chr4 (7-108)||(31691203-31691306)
chr4 (1-85)||(45496850-45496934)
chr4 (1-123)||(4390090-4390212)
chr4 (1-123)||(22183253-22183375)
chr4 (1-110)||(36572064-36572173)
chr4 (1-97)||(4955332-4955428)
chr4 (1-104)||(52884932-52885038)
chr4 (1-107)||(49076836-49076941)
chr4 (2-110)||(18879852-18879960)
chr4 (14-108)||(49302964-49303058)
chr4 (1-110)||(34004587-34004695)
chr4 (1-94)||(49880205-49880297)
chr4 (1-105)||(3244458-3244562)
chr4 (1-97)||(15841383-15841479)
chr4 (1-124)||(16888804-16888927)
chr4 (1-116)||(20825881-20825996)
chr4 (1-120)||(51768052-51768171)
chr4 (1-114)||(43174552-43174665)
chr4 (18-102)||(19504758-19504842)
chr4 (1-109)||(20826262-20826370)
chr4 (42-137)||(45489688-45489784)
chr4 (1-124)||(2740745-2740866)
chr4 (4-124)||(3341176-3341296)
chr4 (10-107)||(3271841-3271940)
chr4 (52-124)||(43174237-43174309)
chr4 (32-138)||(3700433-3700540)
chr4 (1-88)||(23556890-23556977)
chr4 (69-114)||(23817453-23817498)
chr4 (1-74)||(41707503-41707575)
chr4 (53-137)||(45489306-45489391)
chr4 (1-65)||(2741116-2741180)
chr4 (1-93)||(40067089-40067181)
chr4 (1-136)||(49076427-49076559)
chr4 (10-88)||(760243-760320)
chr4 (1-115)||(28034274-28034388)
chr4 (1-74)||(34544151-34544225)
chr4 (36-110)||(41370738-41370812)
chr4 (1-98)||(54741194-54741289)
chr4 (26-74)||(11197296-11197344)
chr4 (66-105)||(19895406-19895445)
chr4 (1-120)||(48111690-48111809)
chr4 (1-64)||(54017750-54017813)
chr4 (9-79)||(6975489-6975559)
chr4 (14-72)||(11706584-11706641)
chr4 (145-186)||(24274873-24274914)
chr4 (42-107)||(39698949-39699014)
chr4 (70-104)||(11702307-11702341)
chr4 (67-104)||(19895533-19895570)
chr4 (10-70)||(2891864-2891924)
chr4 (26-74)||(10396201-10396249)
chr4 (26-74)||(10396486-10396534)
chr4 (10-74)||(15841023-15841086)
[»] chr3 (75 HSPs)
chr3 (1-115)||(37990638-37990752)
chr3 (1-110)||(15772899-15773008)
chr3 (1-110)||(37990981-37991090)
chr3 (1-110)||(43346795-43346904)
chr3 (1-115)||(32589748-32589862)
chr3 (1-136)||(35946567-35946704)
chr3 (1-106)||(39934963-39935068)
chr3 (8-136)||(42342067-42342196)
chr3 (1-124)||(12114552-12114675)
chr3 (1-107)||(22304614-22304720)
chr3 (4-124)||(29644892-29645012)
chr3 (1-123)||(33803243-33803365)
chr3 (1-115)||(41359764-41359878)
chr3 (1-115)||(54018197-54018311)
chr3 (1-137)||(29644557-29644694)
chr3 (9-106)||(22303963-22304060)
chr3 (1-110)||(32462904-32463013)
chr3 (1-136)||(54017793-54017929)
chr3 (1-107)||(21832352-21832456)
chr3 (4-115)||(42342387-42342498)
chr3 (1-117)||(25739422-25739538)
chr3 (4-135)||(45395632-45395763)
chr3 (1-108)||(15773237-15773346)
chr3 (1-122)||(53577409-53577530)
chr3 (14-110)||(22303663-22303759)
chr3 (1-136)||(52634721-52634856)
chr3 (1-124)||(32462549-32462671)
chr3 (1-136)||(45901759-45901894)
chr3 (26-115)||(3135453-3135542)
chr3 (1-124)||(25755439-25755562)
chr3 (1-134)||(44160526-44160657)
chr3 (4-138)||(1634289-1634424)
chr3 (4-97)||(4823703-4823796)
chr3 (1-105)||(39389115-39389219)
chr3 (40-124)||(41359481-41359565)
chr3 (24-124)||(54017538-54017638)
chr3 (1-116)||(53117973-53118087)
chr3 (1-108)||(31190062-31190161)
chr3 (2-107)||(9240195-9240300)
chr3 (1-88)||(3135099-3135186)
chr3 (1-103)||(39914297-39914399)
chr3 (1-115)||(42584823-42584935)
chr3 (1-115)||(50612446-50612565)
chr3 (1-106)||(49336694-49336800)
chr3 (27-84)||(39336000-39336057)
chr3 (11-88)||(47964544-47964621)
chr3 (60-124)||(8328374-8328438)
chr3 (1-104)||(11661996-11662099)
chr3 (1-105)||(33175668-33175777)
chr3 (6-66)||(52634990-52635050)
chr3 (1-125)||(37726549-37726665)
chr3 (1-115)||(39336231-39336342)
chr3 (9-108)||(8327957-8328060)
chr3 (65-115)||(22304302-22304352)
chr3 (1-80)||(33362327-33362406)
chr3 (1-64)||(46546375-46546438)
chr3 (36-138)||(43978839-43978947)
chr3 (38-137)||(7766758-7766857)
chr3 (1-103)||(12749214-12749316)
chr3 (19-88)||(25317221-25317290)
chr3 (35-108)||(47964921-47964994)
chr3 (26-74)||(53596030-53596078)
chr3 (26-74)||(53596345-53596393)
chr3 (4-63)||(3384317-3384376)
chr3 (39-74)||(11661603-11661638)
chr3 (26-68)||(16871005-16871047)
chr3 (26-68)||(17731950-17731992)
chr3 (26-68)||(17735037-17735079)
chr3 (26-68)||(19033181-19033223)
chr3 (26-68)||(19036306-19036348)
chr3 (83-124)||(9239940-9239981)
chr3 (27-68)||(16869843-16869884)
chr3 (24-64)||(16868433-16868473)
chr3 (87-115)||(41360136-41360164)
chr3 (26-74)||(53596545-53596593)
[»] chr6 (47 HSPs)
chr6 (1-124)||(2843599-2843723)
chr6 (1-104)||(3409304-3409407)
chr6 (1-115)||(29518548-29518662)
chr6 (1-115)||(29518965-29519079)
chr6 (1-115)||(32741224-32741338)
chr6 (1-136)||(2377799-2377935)
chr6 (1-106)||(10074371-10074476)
chr6 (1-136)||(16454620-16454756)
chr6 (1-116)||(2578833-2578948)
chr6 (1-124)||(16454952-16455075)
chr6 (1-115)||(2378171-2378285)
chr6 (1-115)||(2578442-2578556)
chr6 (1-118)||(3058271-3058388)
chr6 (1-110)||(10073620-10073729)
chr6 (4-136)||(16107726-16107861)
chr6 (1-137)||(3415503-3415642)
chr6 (1-136)||(1846793-1846928)
chr6 (7-113)||(2579493-2579599)
chr6 (1-115)||(3409705-3409819)
chr6 (1-110)||(6999800-6999909)
chr6 (1-110)||(10073995-10074104)
chr6 (1-115)||(14748341-14748451)
chr6 (1-110)||(35210249-35210358)
chr6 (1-124)||(2579863-2579985)
chr6 (1-105)||(1127405-1127509)
chr6 (1-110)||(5832031-5832139)
chr6 (1-110)||(10911611-10911720)
chr6 (1-136)||(26544094-26544230)
chr6 (1-105)||(12092491-12092595)
chr6 (17-110)||(2579113-2579206)
chr6 (40-124)||(12071681-12071765)
chr6 (1-88)||(6071177-6071264)
chr6 (1-124)||(593697-593822)
chr6 (1-99)||(1950200-1950298)
chr6 (19-124)||(31714732-31714836)
chr6 (1-110)||(16108108-16108205)
chr6 (39-102)||(12085046-12085109)
chr6 (1-64)||(32460630-32460693)
chr6 (1-108)||(5958613-5958716)
chr6 (1-75)||(8481971-8482045)
chr6 (1-81)||(9062383-9062462)
chr6 (60-107)||(3409405-3409452)
chr6 (7-124)||(17135059-17135176)
chr6 (2-97)||(30618634-30618727)
chr6 (52-106)||(10902438-10902492)
chr6 (26-68)||(22605301-22605343)
chr6 (26-75)||(11637760-11637809)
[»] chr1 (64 HSPs)
chr1 (1-117)||(41157036-41157152)
chr1 (1-121)||(26661515-26661635)
chr1 (1-110)||(41759528-41759637)
chr1 (1-137)||(44290434-44290571)
chr1 (1-124)||(44290814-44290938)
chr1 (1-110)||(41157420-41157529)
chr1 (1-115)||(41142417-41142532)
chr1 (1-123)||(5319957-5320078)
chr1 (1-135)||(37556157-37556289)
chr1 (1-110)||(3537603-3537712)
chr1 (1-106)||(40082452-40082556)
chr1 (1-110)||(48588492-48588601)
chr1 (1-136)||(34364552-34364688)
chr1 (1-121)||(14318912-14319032)
chr1 (1-121)||(29798244-29798364)
chr1 (1-117)||(31767158-31767274)
chr1 (1-136)||(39066178-39066313)
chr1 (1-124)||(66462-66585)
chr1 (1-110)||(17294622-17294732)
chr1 (1-99)||(38804370-38804468)
chr1 (1-114)||(34364970-34365083)
chr1 (11-116)||(45493972-45494077)
chr1 (1-111)||(3550765-3550872)
chr1 (1-120)||(11977325-11977444)
chr1 (1-115)||(24600313-24600427)
chr1 (1-91)||(26661921-26662011)
chr1 (17-107)||(32168705-32168795)
chr1 (5-110)||(3875335-3875440)
chr1 (1-82)||(32594748-32594829)
chr1 (1-104)||(9955953-9956057)
chr1 (1-136)||(22077472-22077608)
chr1 (1-108)||(24131994-24132098)
chr1 (1-115)||(34649483-34649597)
chr1 (1-110)||(37850604-37850713)
chr1 (1-105)||(37555775-37555878)
chr1 (1-116)||(22077108-22077223)
chr1 (3-104)||(45839678-45839779)
chr1 (1-116)||(45084427-45084536)
chr1 (1-136)||(50052001-50052136)
chr1 (38-115)||(11977026-11977103)
chr1 (1-110)||(22077833-22077941)
chr1 (1-103)||(66100-66200)
chr1 (1-76)||(44043810-44043885)
chr1 (26-144)||(50051658-50051776)
chr1 (1-108)||(22793323-22793431)
chr1 (1-136)||(5575149-5575284)
chr1 (1-106)||(5528762-5528867)
chr1 (5-104)||(30630648-30630747)
chr1 (27-105)||(19283464-19283542)
chr1 (55-110)||(21378063-21378118)
chr1 (5-51)||(41184151-41184197)
chr1 (1-51)||(41184488-41184538)
chr1 (1-103)||(4956236-4956340)
chr1 (1-104)||(44685502-44685605)
chr1 (10-88)||(1188614-1188692)
chr1 (27-105)||(47380176-47380254)
chr1 (1-74)||(10351205-10351278)
chr1 (39-115)||(41184407-41184486)
chr1 (55-110)||(4266802-4266855)
chr1 (145-189)||(27086606-27086650)
chr1 (11-71)||(35154046-35154106)
chr1 (1-33)||(3537228-3537260)
chr1 (1-105)||(5996881-5996984)
chr1 (38-74)||(12466365-12466401)
[»] chr8 (69 HSPs)
chr8 (1-124)||(3669732-3669855)
chr8 (4-106)||(34834924-34835026)
chr8 (1-115)||(34835254-34835368)
chr8 (1-114)||(9483187-9483300)
chr8 (17-124)||(5915928-5916034)
chr8 (4-115)||(34835523-34835634)
chr8 (4-115)||(34835789-34835900)
chr8 (4-114)||(3670108-3670218)
chr8 (1-115)||(18371993-18372107)
chr8 (1-115)||(45122669-45122783)
chr8 (1-110)||(3038294-3038403)
chr8 (1-136)||(9309400-9309535)
chr8 (1-124)||(9482594-9482717)
chr8 (1-124)||(40518116-40518239)
chr8 (1-115)||(1014244-1014358)
chr8 (10-107)||(30441139-30441236)
chr8 (17-136)||(6651555-6651674)
chr8 (1-124)||(6876852-6876975)
chr8 (1-104)||(45122067-45122170)
chr8 (9-110)||(33113371-33113472)
chr8 (1-108)||(40579512-40579619)
chr8 (1-106)||(25561823-25561929)
chr8 (1-110)||(20870577-20870686)
chr8 (1-114)||(30359316-30359429)
chr8 (1-110)||(40518627-40518736)
chr8 (1-109)||(9608790-9608898)
chr8 (14-136)||(6731953-6732074)
chr8 (1-116)||(1513913-1514028)
chr8 (1-108)||(37544496-37544603)
chr8 (1-116)||(45121908-45122023)
chr8 (1-111)||(30359654-30359764)
chr8 (1-110)||(70278-70387)
chr8 (1-110)||(8918768-8918877)
chr8 (1-105)||(147496-147600)
chr8 (1-111)||(1013874-1013984)
chr8 (38-116)||(8919142-8919220)
chr8 (1-107)||(45121663-45121769)
chr8 (35-124)||(40579259-40579348)
chr8 (16-104)||(32640542-32640630)
chr8 (1-136)||(41972203-41972341)
chr8 (1-134)||(9309024-9309160)
chr8 (1-107)||(5420696-5420802)
chr8 (1-107)||(9507827-9507933)
chr8 (35-116)||(41129067-41129148)
chr8 (1-93)||(9609130-9609222)
chr8 (202-254)||(16697994-16698046)
chr8 (26-104)||(147890-147968)
chr8 (13-115)||(18371660-18371761)
chr8 (1-104)||(4154678-4154779)
chr8 (52-136)||(43274612-43274697)
chr8 (1-124)||(32305522-32305645)
chr8 (41-114)||(12283957-12284030)
chr8 (13-115)||(45123061-45123165)
chr8 (1-115)||(9620677-9620789)
chr8 (56-115)||(18372283-18372342)
chr8 (1-107)||(18380026-18380130)
chr8 (67-136)||(3037944-3038016)
chr8 (35-97)||(20995433-20995495)
chr8 (37-94)||(16524446-16524503)
chr8 (145-190)||(16697926-16697971)
chr8 (1-105)||(4154290-4154393)
chr8 (10-69)||(43274824-43274883)
chr8 (1-105)||(43398077-43398184)
chr8 (1-33)||(41416252-41416284)
chr8 (1-88)||(5274820-5274907)
chr8 (1-48)||(18373236-18373283)
chr8 (1-46)||(3037776-3037821)
chr8 (1-74)||(8794156-8794229)
chr8 (1-60)||(18372988-18373044)
[»] chr5 (61 HSPs)
chr5 (1-136)||(34753003-34753138)
chr5 (1-116)||(40296313-40296428)
chr5 (1-116)||(6500495-6500610)
chr5 (1-112)||(18603122-18603233)
chr5 (1-124)||(3295335-3295457)
chr5 (1-136)||(25327980-25328117)
chr5 (1-110)||(36492221-36492330)
chr5 (1-116)||(6500867-6500982)
chr5 (1-136)||(624241-624378)
chr5 (1-115)||(41170679-41170793)
chr5 (1-110)||(15370447-15370556)
chr5 (4-140)||(27502009-27502146)
chr5 (1-124)||(15370144-15370267)
chr5 (10-113)||(33747825-33747928)
chr5 (1-116)||(41632827-41632942)
chr5 (1-107)||(3295022-3295128)
chr5 (1-115)||(11416976-11417090)
chr5 (1-115)||(26590909-26591023)
chr5 (1-105)||(26074657-26074761)
chr5 (1-117)||(32487439-32487554)
chr5 (1-100)||(13415774-13415873)
chr5 (1-138)||(42405572-42405709)
chr5 (1-116)||(6224241-6224356)
chr5 (1-124)||(9498645-9498767)
chr5 (1-107)||(26075168-26075275)
chr5 (1-107)||(299534-299640)
chr5 (2-136)||(1028493-1028629)
chr5 (1-136)||(623863-623998)
chr5 (42-137)||(26899994-26900089)
chr5 (1-105)||(26074155-26074259)
chr5 (1-124)||(36568559-36568680)
chr5 (1-107)||(35150052-35150157)
chr5 (2-91)||(29549278-29549367)
chr5 (4-138)||(24489181-24489314)
chr5 (1-124)||(2411052-2411175)
chr5 (1-115)||(12662651-12662765)
chr5 (35-136)||(301030-301132)
chr5 (1-122)||(35167830-35167951)
chr5 (58-139)||(24489583-24489666)
chr5 (13-92)||(36527117-36527196)
chr5 (1-94)||(5723811-5723904)
chr5 (1-106)||(38427593-38427697)
chr5 (40-92)||(795254-795306)
chr5 (43-103)||(38427306-38427366)
chr5 (1-74)||(36522277-36522350)
chr5 (26-74)||(13042609-13042657)
chr5 (14-110)||(13785636-13785732)
chr5 (1-88)||(26074807-26074895)
chr5 (1-93)||(41635212-41635304)
chr5 (14-110)||(42435486-42435581)
chr5 (27-94)||(9498343-9498410)
chr5 (1-81)||(31509776-31509857)
chr5 (36-74)||(13042784-13042822)
chr5 (36-74)||(13112782-13112820)
chr5 (54-90)||(795152-795189)
chr5 (27-68)||(34103625-34103666)
chr5 (19-88)||(36521922-36521991)
chr5 (26-70)||(13112607-13112651)
chr5 (1-33)||(26074363-26074395)
chr5 (14-74)||(32445943-32446003)
chr5 (26-74)||(36389016-36389064)
[»] chr2 (62 HSPs)
chr2 (1-108)||(36178611-36178718)
chr2 (1-136)||(6421430-6421566)
chr2 (1-136)||(37105969-37106105)
chr2 (1-116)||(41283473-41283588)
chr2 (1-107)||(36005887-36005993)
chr2 (1-124)||(962643-962766)
chr2 (1-124)||(14745657-14745780)
chr2 (1-108)||(15880308-15880415)
chr2 (1-110)||(5543002-5543111)
chr2 (1-110)||(37106233-37106342)
chr2 (1-136)||(42514694-42514830)
chr2 (1-124)||(5542615-5542738)
chr2 (1-108)||(15511501-15511608)
chr2 (1-107)||(6422155-6422261)
chr2 (10-137)||(3673122-3673250)
chr2 (1-124)||(35580714-35580836)
chr2 (1-103)||(33731693-33731795)
chr2 (1-115)||(36178170-36178284)
chr2 (1-110)||(40679633-40679742)
chr2 (1-120)||(6713021-6713141)
chr2 (1-95)||(28254258-28254350)
chr2 (18-124)||(6421793-6421899)
chr2 (10-115)||(3672756-3672860)
chr2 (1-136)||(29676580-29676709)
chr2 (1-110)||(38796622-38796733)
chr2 (1-100)||(5367500-5367599)
chr2 (4-110)||(7598276-7598382)
chr2 (4-110)||(23346285-23346390)
chr2 (1-124)||(14745283-14745407)
chr2 (1-104)||(1769937-1770040)
chr2 (1-115)||(40733562-40733676)
chr2 (1-106)||(28531322-28531427)
chr2 (10-109)||(37632602-37632701)
chr2 (1-103)||(40163383-40163486)
chr2 (18-116)||(6421688-6421786)
chr2 (4-115)||(40733931-40734041)
chr2 (9-97)||(30313230-30313318)
chr2 (9-101)||(36784273-36784365)
chr2 (1-109)||(7598654-7598754)
chr2 (1-104)||(12529038-12529141)
chr2 (20-115)||(35580438-35580534)
chr2 (14-107)||(16590941-16591034)
chr2 (1-73)||(30323509-30323581)
chr2 (4-74)||(33561491-33561561)
chr2 (26-106)||(29676978-29677058)
chr2 (3-110)||(3594182-3594289)
chr2 (1-88)||(29873563-29873650)
chr2 (17-64)||(31468800-31468847)
chr2 (1-44)||(31899496-31899539)
chr2 (1-87)||(31385782-31385868)
chr2 (46-124)||(31899093-31899170)
chr2 (4-72)||(31259658-31259726)
chr2 (3-63)||(36178320-36178380)
chr2 (1-68)||(37895107-37895174)
chr2 (1-63)||(16542494-16542556)
chr2 (1-115)||(29874022-29874136)
chr2 (1-61)||(28254165-28254225)
chr2 (1-108)||(9231294-9231401)
chr2 (145-186)||(6944837-6944878)
chr2 (1-74)||(30312834-30312907)
chr2 (22-74)||(8904494-8904546)
chr2 (26-74)||(28226407-28226455)
[»] scaffold0702 (2 HSPs)
scaffold0702 (1-136)||(491-627)
scaffold0702 (1-115)||(146-255)
[»] scaffold0391 (2 HSPs)
scaffold0391 (1-136)||(1083-1219)
scaffold0391 (3-74)||(1731-1802)
[»] chr7 (55 HSPs)
chr7 (1-115)||(1085615-1085729)
chr7 (1-115)||(37533363-37533477)
chr7 (1-124)||(22567029-22567152)
chr7 (1-115)||(23376-23490)
chr7 (1-115)||(6054605-6054719)
chr7 (1-115)||(37533010-37533123)
chr7 (1-105)||(7517625-7517729)
chr7 (1-136)||(11845236-11845372)
chr7 (1-104)||(19122776-19122879)
chr7 (1-124)||(30244315-30244438)
chr7 (1-136)||(30245122-30245254)
chr7 (1-116)||(36939731-36939846)
chr7 (4-115)||(40094773-40094884)
chr7 (1-115)||(45433286-45433400)
chr7 (1-103)||(45754760-45754862)
chr7 (1-110)||(34218038-34218147)
chr7 (1-137)||(118276-118414)
chr7 (1-124)||(30032612-30032735)
chr7 (15-110)||(37167840-37167935)
chr7 (1-104)||(45434681-45434784)
chr7 (1-107)||(9901689-9901794)
chr7 (1-124)||(30253537-30253656)
chr7 (1-110)||(29157610-29157719)
chr7 (1-85)||(7554070-7554154)
chr7 (2-116)||(24177481-24177595)
chr7 (2-110)||(28300257-28300366)
chr7 (1-122)||(40230283-40230404)
chr7 (37-110)||(47129450-47129523)
chr7 (1-137)||(41854679-41854815)
chr7 (1-104)||(8128451-8128554)
chr7 (1-91)||(24838724-24838815)
chr7 (1-110)||(14681555-14681662)
chr7 (1-75)||(22566702-22566775)
chr7 (39-108)||(28300574-28300644)
chr7 (1-82)||(1085280-1085361)
chr7 (9-110)||(47129148-47129249)
chr7 (10-110)||(36623014-36623114)
chr7 (1-76)||(16569241-16569316)
chr7 (1-76)||(16596346-16596421)
chr7 (26-137)||(40094390-40094501)
chr7 (44-110)||(37532755-37532821)
chr7 (4-110)||(20599362-20599470)
chr7 (1-105)||(36534795-36534897)
chr7 (57-110)||(30244453-30244506)
chr7 (57-116)||(30245256-30245315)
chr7 (57-116)||(30253671-30253730)
chr7 (5-74)||(4124128-4124197)
chr7 (26-74)||(21416181-21416229)
chr7 (1-77)||(43241540-43241616)
chr7 (26-73)||(23569043-23569090)
chr7 (2-44)||(28301613-28301655)
chr7 (39-101)||(45755010-45755072)
chr7 (11-108)||(37393114-37393210)
chr7 (53-108)||(41910592-41910647)
chr7 (52-105)||(4719305-4719358)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-115)||(47405-47519)
[»] scaffold0078 (2 HSPs)
scaffold0078 (9-107)||(5035-5133)
scaffold0078 (1-76)||(5402-5477)
[»] scaffold0734 (2 HSPs)
scaffold0734 (1-105)||(5441-5546)
scaffold0734 (1-105)||(5822-5931)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-72)||(17496-17569)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-88)||(39501-39588)
[»] scaffold0807 (1 HSPs)
scaffold0807 (5-50)||(3127-3172)
[»] scaffold0504 (1 HSPs)
scaffold0504 (1-33)||(10192-10224)


Alignment Details
Target: chr4 (Bit Score: 99; Significance: 6e-49; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 36629285 - 36629391
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36629285 aacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 36629384  T
Q  104 ggacggt 110  Q
    |||||||    
T  36629385 ggacggt 36629391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25483381 - 25483490
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25483381 ttgaacatcttataagtaagaggatccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 25483480  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  25483481 tgtggacggt 25483490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39792971 - 39792862
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39792971 ttgaacaccttataagaaagaggaaccgtaaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 39792872  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  39792871 tgtggacggt 39792862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 41370402 - 41370538
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||| |||| |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  41370402 ttgaaaaccttataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtagtgtctctcttgcttgagtggttgttctagcctcga 41370501  T
Q  101 tgtggacggttccccaaac-tccccagtgacccaaca 136  Q
    |||||||||| |||| ||| |||||||||||||||||    
T  41370502 tgtggacggtcccccgaacttccccagtgacccaaca 41370538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 23817783 - 23817677
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacgg 109  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23817783 ttataagtaagaggattcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgctagtgtggttgttctagcctcgatgtggacgg 23817684  T
Q  110 ttcccca 116  Q
    | |||||    
T  23817683 tccccca 23817677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 55933235 - 55933101
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||   ||||||||||||||||    
T  55933235 ttgaacaccttataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtggtgtctctcttacttgtacagttgttctagcctcga 55933136  T
Q  101 tgtggacggttccccaaactccccagtgacccaaca 136  Q
    |||||||||| |||||| || |||||||||||||||    
T  55933135 tgtggacggtcccccaagct-cccagtgacccaaca 55933101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22028480 - 22028363
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  22028480 ttgaacaccttattagtaagaggacccataaactcattgtcttaatgttttgggtaagagtgtggtgtctctcttgcttgtgaggttgttctagcctcaa 22028381  T
Q  101 tgtggacggttccccaaa 118  Q
    |||||||||| |||||||    
T  22028380 tgtggacggtcccccaaa 22028363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 36608772 - 36608636
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||| |||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||  || |||||||||||||||||||||    
T  36608772 ttgaacacctcataagtaagaggatccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcctcga 36608673  T
Q  101 tgtggacggttccccaaactcccc-agtgacccaaca 136  Q
    |||||||||| |||||| ||||||  |||||||||||    
T  36608672 tgtggacggtcccccaagctcccctcgtgacccaaca 36608636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 39404063 - 39404186
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||||||||||||  ||||||||||| || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39404063 ttgaacactttataagtaagaggactcataaactcatagcattaaggttttgggtaagagtgtggcgtctctcttgcttgtgtggttgttctagcctcga 39404162  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| |||| | ||||||    
T  39404163 tgtggacggtcccccgagctcccc 39404186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3340852 - 3340961
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||| ||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  3340852 ttgagcaccttataagtaagaggacccataaacccactgccttaaggttttgggtaagagtgtggtgtctttcttgcttgtggggttgttctagcctcga 3340951  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  3340952 tgtggacggt 3340961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 50630866 - 50630757
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  50630866 ttgaacacattataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttttagcctcga 50630767  T
Q  101 tgtggacggt 110  Q
    ||||| ||||    
T  50630766 tgtgggcggt 50630757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 54017706 - 54017597
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||  |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  54017706 ttgaacatcttataagtaagaggacccataaacccattgccttaaggttttaggtaagagtgtgatgtctctcttgcttatgtggttgttctagcctcga 54017607  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  54017606 tgtggacggt 54017597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 10245965 - 10246087
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| ||  |||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  10245965 ttgaacaccttataagtaagagga-ccataaacccaaagccttaaggttttgggtaagagtgtggtgtctcccttgcttgtctggttgttctagcctcga 10246063  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||| | |||||| ||||||    
T  10246064 tgtggacgctcccccaagctcccc 10246087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1731758 - 1731649
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| ||||||| |||||||| ||||||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  1731758 ttgaacatcttataaataagaggacccataaaccaattgccttaaggttttgggtaagagtgtggtgtttctcttgcttgtgtggttgttctagcctcaa 1731659  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  1731658 tgtggacggt 1731649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44621047 - 44621156
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||   ||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  44621047 ttgaacaccttataagtaagagggcacataaactcattgtcttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttattctagcctcga 44621146  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  44621147 tgtggacggt 44621156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 54343112 - 54342984
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||       |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54343112 ttgaacaccttataagtaagaggaccc-------cattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgagtggttgttctagcctcga 54343020  T
Q  101 tgtggacggttccccaaactccccagtgacccaaca 136  Q
    |||||| ||| |||| | || |||||||||||||||    
T  54343019 tgtggatggtcccccgagcttcccagtgacccaaca 54342984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 54936241 - 54936376
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||  | | ||||||||||||||||||||    
T  54936241 ttgaacaccttgtaagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcac-tatgtggttgttctagcctcga 54936339  T
Q  101 tgtggacggttccccaaact-ccccagtgacccaaca 136  Q
    ||||||| || |||| | || ||||||||||||||||    
T  54936340 tgtggacagtcccccgagctcccccagtgacccaaca 54936376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 39404445 - 39404552
Alignment:
Q  3 gaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatg 102  Q
    |||||||||||||||||||||| ||||||||  || |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  39404445 gaacaccttataagtaagaggacccataaacctatagccttaaggttttgggcaagaatgtggtgtctctcttgcttgtgtggttgttctagcctcgatg 39404544  T
Q  103 tggacggt 110  Q
    || |||||    
T  39404545 tgaacggt 39404552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 54108958 - 54109060
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  54108958 ttgaacaccttataagtaagaggacccataaacccattgccttaagtttt-gggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcttcga 54109056  T
Q  101 tgtg 104  Q
    ||||    
T  54109057 tgtg 54109060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32941234 - 32941128
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| |||||||   |||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||||||    
T  32941234 ttgaacaccttataaataagagggctcataaactcattgccttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcggttgttctagcctcga 32941135  T
Q  101 tgtggac 107  Q
    |||||||    
T  32941134 tgtggac 32941128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34646760 - 34646651
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||||||||||| |     
T  34646760 ttgaacaccttataactaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctctggtctgtgtggttgttctagccttgt 34646661  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  34646660 tgtggacggt 34646651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 52884740 - 52884844
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcggg-taagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  52884740 ttgaacaccttataagtaagatgatcgataaacccattgccttaaggttttggggtaagagtgtggtgtctctcttgcttgtgcggttgatctagcctcg 52884839  T
Q  100 atgtg 104  Q
    |||||    
T  52884840 atgtg 52884844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 44620705 - 44620827
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||||||||||||||| |||||||| |||  ||||||||||| ||||||||||||||| ||||||||||||||| ||||||| || ||||||    
T  44620705 ttgaacactttataagtaagaggacccataaac-cataaccttaaggttttgggtaagagtgtggtttctctcttgcttgtgcggttgttatatcctcga 44620803  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| |||||| ||||||    
T  44620804 tgtggacggtcccccaagctcccc 44620827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 50002471 - 50002609
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| || |||||||||||| |||||||  ||||| |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  50002471 ttgaacactttttaagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctcttacttgtgcggttgttctagcctcga 50002570  T
Q  101 tgtggacggttccccaaactcccc--agtgacccaacaa 137  Q
    ||||| |||| |||| |||  |||  |||||||||||||    
T  50002571 tgtgggcggtcccccgaaccaccctaagtgacccaacaa 50002609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18932860 - 18932746
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| ||||||||| |||||||| |||||||| ||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  18932860 ttgaataccttataaataagaggacccataaacccattgccttaaggttttaggtaagagtgtggtgtctctcttacttgagtggttgttatagcctcga 18932761  T
Q  101 tgtggacggttcccc 115  Q
    |||| ||||| ||||    
T  18932760 tgtgtacggtccccc 18932746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22028072 - 22027966
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||| |||||||||||||| |||| |||||||||| ||| |||||    
T  22028072 ttgaacaccttataagtaagaggacccataaacatattgccttaaggttttgggtaagaatgtggtgtctctctcgcttatgtggttgttttagtctcga 22027973  T
Q  101 tgtggac 107  Q
    |||||||    
T  22027972 tgtggac 22027966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 43827485 - 43827598
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||| |||||||| |||||||| ||||||| ||||||||||||||||| || ||||||||||||||||||||| |||||| |||||||||| ||||||    
T  43827485 ttgaactccttataaataagaggacccataaattcattgccttaaggttt-ggataagagtgtggtgtctctcttacttgtgcggttgttctaacctcga 43827583  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  43827584 tgtggacggtccccc 43827598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 54108581 - 54108718
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaact-cattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    ||||||||||||||||||| |||| ||||||| | |||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||     
T  54108581 ttgaacaccttataagtaaaaggacccataaaattcattgccttaaggttttggctaagagtgtggtgtctatcttgcttgtgtggttgttctagcctca 54108680  T
Q  100 atgtggacggttcccca-aact-ccccagtgacccaaca 136  Q
    |||||| |||| ||||| | || ||||||||||||||||    
T  54108681 atgtgg-cggtcccccatagctcccccagtgacccaaca 54108718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 16889647 - 16889510
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| ||||||||||||||||||| |||||||  | |||||||| |||| |||||||||| ||||||||||||| |||||||| |||||||| ||||||    
T  16889647 ttgaataccttataagtaagaggattcataaacctactgccttaaagttttgggtaagagtatggtgtctctcttccttgtgtgattgttctaacctcga 16889548  T
Q  101 tgtggacggttccccaaactcccca-gtgacccaacaa 137  Q
    |||||||||| || | | ||||||| ||||||||||||    
T  16889547 tgtggacggtccctcgagctccccacgtgacccaacaa 16889510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44620398 - 44620507
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| ||||||   |||||||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||| ||    
T  44620398 ttgaacaccttataaataagagagcccataaacccattgccttaaggttttgggtaagagtgtgatgtttctcttgcttgtgtggttgttctaaccttga 44620497  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  44620498 tgtggacggt 44620507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50459766 - 50459875
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| ||||||||||||||||  ||||||| ||||  ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  50459766 ttgaacatcttataagtaagaggactcataaacccattatcttaaggttttaggtaagagcgtggtgtctctcttgcttgtgtggttgttctagcctcga 50459865  T
Q  101 tgtggacggt 110  Q
    |||| |||||    
T  50459866 tgtgcacggt 50459875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 31691203 - 31691306
Alignment:
Q  7 accttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtc--tctcttgcttgtgtggttgttctagcctcgatgtg 104  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||  | |||||||||||||||||||    
T  31691203 accttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggcgtctatctcttgcttgtacgattgttctagcctcgatgtg 31691302  T
Q  105 gacg 108  Q
    ||||    
T  31691303 gacg 31691306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 45496850 - 45496934
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtgg 85  Q
    |||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  45496850 ttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtgg 45496934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 4390212 - 4390090
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||||| | | | |||||| ||||||||| |||||||||||||  ||||||||||||||||  ||||||||||||||||    
T  4390212 ttgaacaccttataagtaagaggatcctttagcacattgcgttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcagttgttctagcctcga 4390113  T
Q  101 tgtggacggttccccaaactccc 123  Q
    || |||||||  ||||| |||||    
T  4390112 tgcggacggtctcccaagctccc 4390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 22183375 - 22183253
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||  |||||||||| |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||  |||||  |||||||||||||||||    
T  22183375 ttgaacaatttataagtaaaaggacccataaacccattgccttaaggttttggataagagtgtggcgtctctctcacttgtacggttgttctagcctcga 22183276  T
Q  101 tgtggacggttccccaaactccc 123  Q
    |||||||||| ||||| ||||||    
T  22183275 tgtggacggtcccccagactccc 22183253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36572064 - 36572173
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| || |||||||  |||||||||||||||| |||| ||||| |||||||||||| ||||||| |||||||| ||||||||    
T  36572064 ttgaacaccttataagtaagaagacccataaatccattgccttaaggttttgggttagagtatggtgtctctctcgcttgtgcggttgttcaagcctcga 36572163  T
Q  101 tgtggacggt 110  Q
    |||| |||||    
T  36572164 tgtgaacggt 36572173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4955428 - 4955332
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcct 97  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||| |||||||||||||| ||||||||| |||||| ||||| ||||||||    
T  4955428 ttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttacttgtgcggttgctctagcct 4955332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 52884932 - 52885038
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaagg-tttcgggtaagagtgtggtg--tctctcttgcttgtgtggttgttctagcct 97  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| |||||||  ||||||||  ||||||||||| ||||||||    
T  52884932 ttgaacaccttataagtaagaggatccataaacccattgccttaaggttttggggtaagaatgtggtgtctctctcttatttgtgtggttgatctagcct 52885031  T
Q  98 cgatgtg 104  Q
    |||||||    
T  52885032 cgatgtg 52885038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 49076941 - 49076836
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||| ||||||| | |||||||| |||  ||||||||||| |||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  49076941 ttgaacaccttata-gtaagagaacccataaacccataaccttaaggttttgggttagagtgtggtgtctttcttgcttgtgcggttgttctagcctcga 49076843  T
Q  101 tgtggac 107  Q
    |||||||    
T  49076842 tgtggac 49076836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 18879852 - 18879960
Alignment:
Q  2 tgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgat 101  Q
    |||||||||||||||||||| || | ||||||  ||| ||||||||||| |||||||||||||  |||||| ||| |||||||||||||||||| |||||    
T  18879852 tgaacaccttataagtaagatgacctataaacctatttccttaaggttttgggtaagagtgtgacgtctcttttggttgtgtggttgttctagcttcgat 18879951  T
Q  102 gtggacggt 110  Q
    |||||||||    
T  18879952 gtggacggt 18879960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 49302964 - 49303058
Alignment:
Q  14 aagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacg 108  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||| ||| || | |||||||| ||||||||||||||    
T  49302964 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtatctcttacttatgcgattgttctatcctcgatgtggacg 49303058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34004695 - 34004587
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||||||||  | ||||||||||  ||||||||  |||||| |||||||||||||||||    
T  34004695 ttgaacaacttataagtaagaggacccataaactcatt-ccttaaggttttcgataagagtgtgccgtctctctcccttgtgcggttgttctagcctcga 34004597  T
Q  101 tgtggacggt 110  Q
    |||| |||||    
T  34004596 tgtgaacggt 34004587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 49880205 - 49880297
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctag 94  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||| ||||||||||||||| || ||| ||||||||||    
T  49880205 ttgaacaccttataagtaagaggacccataaacccactgccttaaggttttgggtaagagcgtggtgtctctcttgtttatgt-gttgttctag 49880297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3244562 - 3244458
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||| |||| |||||||| ||||  ||||||||  ||||| ||||||||| ||||||||    
T  3244562 ttgaacatcttataagtaagaggacccataaactcattgtcttaaagttttgggtaagaatgtgtcgtctctctcacttgtatggttgttccagcctcga 3244463  T
Q  101 tgtgg 105  Q
    |||||    
T  3244462 tgtgg 3244458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 15841479 - 15841383
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcct 97  Q
    |||||||| || ||||| ||||||| ||||||| |||||||||||||||| ||||||||||||| |||||||||  |||||||||||| ||||||||    
T  15841479 ttgaacactttgtaagtgagaggattcataaacacattgccttaaggttttgggtaagagtgtgatgtctctctcacttgtgtggttgctctagcct 15841383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 16888927 - 16888804
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| |||||||||||||||| | | |||||||||||| |||| ||||| ||||||||||||| ||||||||||| ||||| | |||||||||  ||||    
T  16888927 ttgaataccttataagtaagagaacctataaactcattgtcttacggttttgggtaagagtgtgatgtctctcttgtttgtgcgattgttctagtttcga 16888828  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    ||| |||||| ||| || ||||||    
T  16888827 tgtagacggtcccctaagctcccc 16888804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20825881 - 20825996
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| |||||| | ||||||||   | |||||||||||| ||||||||||||||||| |||||| ||| || |||||||||||||| ||    
T  20825881 ttgaacaccttataaataagagcacccataaacctttagccttaaggttttgggtaagagtgtggtgtttctcttccttatgcggttgttctagccttga 20825980  T
Q  101 tgtggacggttcccca 116  Q
    ||||||| || |||||    
T  20825981 tgtggacagtccccca 20825996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 51768171 - 51768052
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| ||||||||  ||||||||||||| |||||||||| |||||| |||  | |||||||||| ||| || | |||||||| ||||||    
T  51768171 ttgaacaccttataaataagaggactcataaactcattgtcttaaggttttgggtaaaagtacgatgtctctcttacttatgggattgttctaacctcga 51768072  T
Q  101 tgtggacggttccccaaact 120  Q
    ||||||||||  ||||||||    
T  51768071 tgtggacggtctcccaaact 51768052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 43174552 - 43174665
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  |||||||  ||  |||||| || | |||||||||||||| |||||||||| || | |||||||| |||||| ||    
T  43174552 ttgaacaccttataagtaagaggacacataaacctatgaccttaaagtgttgggtaagagtgtggcgtctctcttgtttatatggttgttgtagccttga 43174651  T
Q  101 tgtggacggttccc 114  Q
    ||||||||||||||    
T  43174652 tgtggacggttccc 43174665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 19504758 - 19504842
Alignment:
Q  18 aagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatg 102  Q
    ||||||| |||||||   |||||||||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  19504758 aagaggacccataaatctattgccttaaagttttgggtaagagtgtggcgtctatcttgcttgtgtggttgttctagcctcgatg 19504842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 20826262 - 20826370
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||||||||||||| | |||||||| ||| |||||||  |||  |||||||||||| |||||||||| ||| || | |||||||||||||||    
T  20826262 ttgaacacgttataagtaagagaacccataaacccatagccttaacattttaggtaagagtgtgatgtctctcttccttatgcgattgttctagcctcga 20826361  T
Q  101 tgtggacgg 109  Q
    |||||||||    
T  20826362 tgtggacgg 20826370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 45489784 - 45489688
Alignment:
Q  42 ttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcc-ccagtgacccaacaa 137  Q
    ||||||||| |||||| |||||||||||||||| |||||  |||||||||||| |||||||||| || | ||||||||||| |||||||||||||||    
T  45489784 ttaaggttttgggtaatagtgtggtgtctctctcgcttgcatggttgttctagtctcgatgtggccgatcccccaaactcctccagtgacccaacaa 45489688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 2740745 - 2740866
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| | |||||| ||  ||||||||||||   |||||||||||| ||||||||  ||  ||||||||||||||||||||    
T  2740745 ttgaacaccttataagtaagaggacctataaacccagagccttaaggttttacgtaagagtgtggcgtctctctcact--tgtggttgttctagcctcga 2740842  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    | |||| ||| |||| | ||||||    
T  2740843 tatggatggtcccccgagctcccc 2740866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 3341176 - 3341296
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||| ||||||||||||||| ||||||  ||||||  ||||| ||| ||||||||||||| ||||| ||||  || ||||||| || || |||||||||    
T  3341176 aacactttataagtaagaggacccataacatcattgttttaagattttgggtaagagtgtgatgtctttcttaattatgtggttattttaacctcgatgt 3341275  T
Q  104 ggacggttccccaaactcccc 124  Q
     |||||| |||||||||||||    
T  3341276 agacggtcccccaaactcccc 3341296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 3271841 - 3271940
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtg-gtgtctctc-ttgcttgtgtggttgttctagcctcgatgtggac 107  Q
    ||||||||||||| | ||||||||  ||||||||||||||| ||||||||||||| || |||||| ||  || |||||||||||||||||||||||||||    
T  3271841 ttataagtaagagaacccataaacctattgccttaaggttttgggtaagagtgtgtgtctctctcgtttattatgtggttgttctagcctcgatgtggac 3271940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 43174237 - 43174309
Alignment:
Q  52 gggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcccc 124  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||| |||||||||||| |||| | ||||||    
T  43174237 gggtaagagtgtggtgtctctctcacttgtgtggttgttcaagccttgatgtggacggtcccccgagctcccc 43174309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 3700433 - 3700540
Alignment:
Q  32 actcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcc-ccagtgac 130  Q
    ||||||||||||||||||| || ||||||| || |||||||||   |||||||||| ||| ||||||||||||||||||  ||| |||||| | ||||||    
T  3700433 actcattgccttaaggttttggataagagtatgatgtctctctcatttgtgtggttattcaagcctcgatgtggacggtctcccgaactcctctagtgac 3700532  T
Q  131 ccaacaaa 138  Q
    | ||||||    
T  3700533 ctaacaaa 3700540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23556977 - 23556890
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttg 88  Q
    |||||||  |||||| |||||| ||||||||| |||||||||||| |||| || ||||||||||  ||||||||| ||||||||||||    
T  23556977 ttgaacattttataaataagagaatccataaaatcattgccttaaagttttggataagagtgtgacgtctctcttacttgtgtggttg 23556890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 23817498 - 23817453
Alignment:
Q  69 ctctcttgcttgtgtggttgttctagcctcgatgtggacggttccc 114  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  23817498 ctctcttgctagtgtggttgttctagcctcgatgtggacggttccc 23817453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41707575 - 41707503
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    ||||||||| ||||||||| || | |||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  41707575 ttgaacaccatataagtaaaagaacccataaactcattgtcttaaggttt-tggtaagagtgtggtgtctctct 41707503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 45489391 - 45489306
Alignment:
Q  53 ggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcccc-agtgacccaacaa 137  Q
    |||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||| ||| || | ||||||||  ||||||||||||    
T  45489391 ggtaagagtgtgatgtctcttttgctagtgtgattgttctagcctcgatgtggatggtccctccaactccccgcgtgacccaacaa 45489306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2741116 - 2741180
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtgg 65  Q
    ||||| |||||||||||||||||| ||||||   |||||||||||||||| ||||||||||||||    
T  2741116 ttgaataccttataagtaagaggacccataactccattgccttaaggttttgggtaagagtgtgg 2741180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 40067089 - 40067181
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttcta 93  Q
    |||||||| |||||||||||||||  |||| |  || | ||||||| ||| |||||| |||||| |||||||||||||| |||||||||||||    
T  40067089 ttgaacacattataagtaagaggacacatagatccactaccttaagattttgggtaaaagtgtgatgtctctcttgcttatgtggttgttcta 40067181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 49076559 - 49076427
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| | |||||| ||||| ||||| |||| |||||  || | ||||||| ||| |||| || | ||||| |||||||||    
T  49076559 ttgaacaccttataagtaagaggacctataaacccattgtcttaaagttt-gggta--agggcggtgtctgtctcgcttatgcgattgttatagcctcga 49076463  T
Q  101 tgtggacggttccccaaactccccagtgacccaaca 136  Q
    |||||||||| ||||   ||||||| |||| |||||    
T  49076462 tgtggacggtcccccgcgctccccaatgactcaaca 49076427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 760243 - 760320
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttg 88  Q
    |||||||| |||||| ||||||||||||||||||||| |||  ||||| ||||||||||||||||   |||||||||||    
T  760243 ttataagtgagaggacccataaactcattgccttaagattt-tggtaaaagtgtggtgtctctctcatttgtgtggttg 760320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 28034274 - 28034388
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||||| |||| | ||||||||| ||||| |||||||||  ||||||||||||| ||||||||  ||| || ||||| ||| | || ||    
T  28034274 ttgaacactttataagtgagagaacccataaacttattgctttaaggttttaggtaagagtgtggcgtctctctcacttatgcggttgctctggtctgga 28034373  T
Q  101 tgtggacggttcccc 115  Q
    |||||| ||| ||||    
T  28034374 tgtggatggtccccc 28034388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34544151 - 34544225
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaagg-tttcgggtaagagtgtggtgtctctct 74  Q
    |||| ||| |||||| | |||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  34544151 ttgatcactttataaatgagaggacccataaactcattgccttaaggtttttgggtaagagtgtggtatctctct 34544225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 41370738 - 41370812
Alignment:
Q  36 attgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    ||||||||||| |||  ||||| | |||| |||||||||| |||| |||||||||||| ||||||||||||||||    
T  41370738 attgccttaagattttaggtaaaaatgtgatgtctctcttacttgagtggttgttctaacctcgatgtggacggt 41370812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 54741289 - 54741194
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctc 98  Q
    |||||||||||||||||||||||| ||||| ||  |||| |||||||||| || ||||||||| || |||||||  |  |||| ||||||||||||||    
T  54741289 ttgaacaccttataagtaagaggacccatacacagattgtcttaaggttttggataagagtgtagtctctctct--cacgtgttgttgttctagcctc 54741194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 11197296 - 11197344
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  11197296 ccataaacccattgccttagggttttgggtaagagtgtggtgtctctct 11197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 19895406 - 19895445
Alignment:
Q  66 tgtctctcttgcttgtgtggttgttctagcctcgatgtgg 105  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  19895406 tgtctctcttgcttgtgcggttgttctagcctcgatgtgg 19895445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 48111809 - 48111690
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||||||| ||||   |||||  |||| |||||||||||  |||| |||||||||||||||||  |   ||||||| ||||| |||| |    
T  48111809 ttgaacacattataagtaaaaggacttataaatccattaccttaaggttttaggtatgagtgtggtgtctctctcacaaatgtggtttttctaacctcaa 48111710  T
Q  101 tgtggacggttccccaaact 120  Q
    |||||||||| |||| ||||    
T  48111709 tgtggacggtcccccgaact 48111690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 54017813 - 54017750
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtg 64  Q
    |||||||||||||||||||||||| |||||  | ||||| ||||||||||  ||||||||||||    
T  54017813 ttgaacaccttataagtaagaggacccatattcccattgtcttaaggttttaggtaagagtgtg 54017750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 6975559 - 6975489
Alignment:
Q  9 cttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgctt 79  Q
    ||||||||||||||||  ||||||  ||||  |||||| ||| |||||||||||||| |||||||||||||    
T  6975559 cttataagtaagaggactcataaatccattatcttaagattttgggtaagagtgtggcgtctctcttgctt 6975489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 11706641 - 11706584
Alignment:
Q  14 aagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctct 72  Q
    ||||||||||| | ||||||||||||| ||||||||| |||||||||||||| ||||||    
T  11706641 aagtaagagga-ctataaactcattgctttaaggttttgggtaagagtgtggcgtctct 11706584  T

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Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 24274873 - 24274914
Alignment:
Q  145 tgcgcaatggttaccctctcgaatgacatgttggaaagaaat 186  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  24274873 tgcgcaatggttaccctctcgaagcacatgttggaaagaaat 24274914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 39699014 - 39698949
Alignment:
Q  42 ttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggac 107  Q
    ||||||||| | |||||||||| |  ||||||||||||||| |||| |||||| ||||||||||||    
T  39699014 ttaaggttttgagtaagagtgtagcatctctcttgcttgtgcggttattctagtctcgatgtggac 39698949  T

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Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 11702341 - 11702307
Alignment:
Q  70 tctcttgcttgtgtggttgttctagcctcgatgtg 104  Q
    ||||||||||||| |||||||||||||||||||||    
T  11702341 tctcttgcttgtgcggttgttctagcctcgatgtg 11702307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 19895533 - 19895570
Alignment:
Q  67 gtctctcttgcttgtgtggttgttctagcctcgatgtg 104  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  19895533 gtctatcttgcttgtgtggttgttctagcttcgatgtg 19895570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 2891924 - 2891864
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtct 70  Q
    ||||||||||||||||||||||||  | || |||||||||| |||| | |||||| |||||    
T  2891924 ttataagtaagaggatccataaacctaatgtcttaaggttttgggttaaagtgtgatgtct 2891864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 10396201 - 10396249
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| |||||||||| |||||  |||||||| |||||||||||||    
T  10396201 ccataaacccattgccttagggttttaggtaagagggtggtgtctctct 10396249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 10396486 - 10396534
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| |||||||||| ||||| || |||||||||||| |||||||    
T  10396486 ccataaacccattgccttagggttttggataagagtgtggtctctctct 10396534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 15841086 - 15841023
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| |||||||| |||||| |||||| ||||| ||| ||||||||||||  |||||||||    
T  15841086 ttataagtgagaggatctataaacccattgctttaagtttt-gggtaagagtgtattgtctctct 15841023  T

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Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 37990752 - 37990638
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37990752 ttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtgattgttctagcctcga 37990653  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  37990652 tgtggacggtccccc 37990638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15772899 - 15773008
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||    
T  15772899 ttgaacaccttataagtaagaggacccataaactcattgctttaaggttttggataagagtgtggtgtctctcttgcttgtgtggttgttctaacctcga 15772998  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  15772999 tgtggacggt 15773008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37991090 - 37990981
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37991090 ttgaacaccttataagtaagaggacctataaactcatcgccttaaggttttgggtaagagtgtggtgtctctcttgcttatgtggttgttctagcctcga 37990991  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  37990990 tgtggacggt 37990981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43346904 - 43346795
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  43346904 ttgaacaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcta 43346805  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  43346804 tgtggacggt 43346795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 32589748 - 32589862
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||    
T  32589748 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcttgcttgtgtggttgttctaggctcga 32589847  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  32589848 tgtggacggtccccc 32589862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 35946567 - 35946704
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||| |||||| ||||||||||||||||||||||||   |||||||||||||||    
T  35946567 ttgaacaccttataagtaagaggacccataaacccgttgccttaaggttttgggtaaaagtgtggtgtctctcttgcttgtgcaattgttctagcctcga 35946666  T
Q  101 tgtggacggttccccaaa-ct-ccccagtgacccaaca 136  Q
    |||||||||| ||||||| || ||||||||||||||||    
T  35946667 tgtggacggtcccccaaagctcccccagtgacccaaca 35946704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39935068 - 39934963
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||||||    
T  39935068 ttgaacaccttataagtaagaggatccataaacccattgccttaaagttttgagtaagagtgtgatgtctctcttgcttgtgtggttgttctagcctcga 39934969  T
Q  101 tgtgga 106  Q
    ||||||    
T  39934968 tgtgga 39934963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 42342196 - 42342067
Alignment:
Q  8 ccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggac 107  Q
    |||||||||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  42342196 ccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggac 42342097  T
Q  108 ggttccccaaactccc-cagtgacccaaca 136  Q
    ||| | || ||||||| | |||||||||||    
T  42342096 ggtcctccgaactccctcggtgacccaaca 42342067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 12114675 - 12114552
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||| |||    
T  12114675 ttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctcttacttgtgcggttgttctagccacga 12114576  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    ||||| |||| ||||| |||||||    
T  12114575 tgtggtcggtcccccagactcccc 12114552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22304614 - 22304720
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  22304614 ttgaataccttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagtctcga 22304713  T
Q  101 tgtggac 107  Q
    |||||||    
T  22304714 tgtggac 22304720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 29645012 - 29644892
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||| |||||||||||||| ||||||||||||| || ||||||| ||||||||||||    
T  29645012 aacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggcgtctctcttgcttatgcggttgttttagcctcgatgt 29644913  T
Q  104 ggacggttccccaaactcccc 124  Q
    ||||||| |||||| ||||||    
T  29644912 ggacggtcccccaagctcccc 29644892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 33803365 - 33803243
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||| |||||||||||||| |||||||| |||||| ||||||| | |||||||||||||| ||||| ||  ||||||||||||||||||||||||    
T  33803365 ttgaacaccatataagtaagaggacccataaacccattgcattaaggtattgggtaagagtgtggcgtctccctctcttgtgtggttgttctagcctcga 33803266  T
Q  101 tgtggacggttccccaaactccc 123  Q
    |||||||||| ||||||||||||    
T  33803265 tgtggacggtcccccaaactccc 33803243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 41359878 - 41359764
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  41359878 ttgaataccttataagtaagaggacccataaacccattgccttaaggttttgggtaagaatgtggcgtctctctcgcttgtgtggttgttctagcctcga 41359779  T
Q  101 tgtggacggttcccc 115  Q
    ||||| |||| ||||    
T  41359778 tgtgggcggtccccc 41359764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 54018311 - 54018197
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||  |  |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  54018311 ttgaacaccttataagtaagaggacccataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcatgcttgtgtggttgttctagcctcga 54018212  T
Q  101 tgtggacggttcccc 115  Q
    ||||| |||| ||||    
T  54018211 tgtgggcggtccccc 54018197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 29644694 - 29644557
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||| | |||||||| ||||| |||||||||| |||||||||||||| ||||||||||||| || ||||||| |||| ||||    
T  29644694 ttgaacaccttataagtaagagaacccataaacccattgtcttaaggttttgggtaagagtgtggcgtctctcttgcttatgcggttgttttagcttcga 29644595  T
Q  101 tgtggacggttccccaaactcccc-agtgacccaacaa 137  Q
    |||||| ||| |||||||||||||  ||||||||||||    
T  29644594 tgtggatggtcccccaaactcccctcgtgacccaacaa 29644557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 22304060 - 22303963
Alignment:
Q  9 cttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgga 106  Q
    |||||||||||| ||| |||||||| |||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22304060 cttataagtaagcggacccataaacccattgccttaaggttttggataagagtgtggtgtctctcttgcttgagtggttgttctagcctcgatgtgga 22303963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32463013 - 32462904
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| ||||||||||||||| ||  ||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||    
T  32463013 ttgaataccttataagtaagaagactcataaacccattgccttaaggttttgagtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcga 32462914  T
Q  101 tgtggacggt 110  Q
    |||| |||||    
T  32462913 tgtgtacggt 32462904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 54017929 - 54017793
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  |||||||  |  |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  54017929 ttgaacaccttataagtaagaggactcataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcttacttgtgtggttgttctagcttcga 54017830  T
Q  101 tgtggacggttccccaaact-ccccagtgacccaaca 136  Q
    ||||| |||| ||||   || ||||||||||||||||    
T  54017829 tgtgggcggtccccctggctcccccagtgacccaaca 54017793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21832456 - 21832352
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||| ||||||||  |||| ||||||||||||||| ||||||||||||||||||    
T  21832456 ttgaacaccttataagtaagaggactcataaactcatagccttaaggttttgggtaaga--gtggcgtctctcttgcttgtctggttgttctagcctcga 21832359  T
Q  101 tgtggac 107  Q
    |||||||    
T  21832358 tgtggac 21832352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 42342498 - 42342387
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||||||||||||||||||| |||||||  ||||| |||||||||| |||||||||||||  |||||||||||||||| ||||||||||||||| ||||    
T  42342498 aacaccttataagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcggttgttctagcctcaatgt 42342399  T
Q  104 ggacggttcccc 115  Q
    ||||||| ||||    
T  42342398 ggacggtccccc 42342387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25739538 - 25739422
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| | |||||||||||||| ||||||||||||||| || |||||| |||||||||||||  |||||||| ||||||| ||| |||||||||||||    
T  25739538 ttgaacatcatataagtaagaggacccataaactcattgcttttaggttttgggtaagagtgtgacgtctctctagcttgtgcggtagttctagcctcga 25739439  T
Q  101 tgtggacggttccccaa 117  Q
    |||||||||| ||||||    
T  25739438 tgtggacggtcccccaa 25739422  T

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Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 45395763 - 45395632
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||| |||||||||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||||||  |||||| ||||| ||||||||||||||    
T  45395763 aacacgttataagtaagaggatccataaacccattgtcttaatgttttgggtaagagtgtggtgtctctctcacttgtggggttgctctagcctcgatgt 45395664  T
Q  104 ggacggttccccaaactccccagtgacccaac 135  Q
    ||| |||  |||||| | ||| |||| |||||    
T  45395663 ggagggtctcccaaagttccccgtgatccaac 45395632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15773237 - 15773346
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctct--cttgcttgtgtggttgttctagcctc 98  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||| |||| ||||||||||||| |||||||  ||||||||||||||||||||| ||||    
T  15773237 ttgaacatcttataagtaagaggactcataagctcattgccttaaagttttgggtaagagtgtgatgtctcttgcttgcttgtgtggttgttctaacctc 15773336  T
Q  99 gatgtggacg 108  Q
    ||||||||||    
T  15773337 gatgtggacg 15773346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 53577409 - 53577530
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||| || |||| ||||||||||||  ||||||||||||| | ||||||||||||||||||||||||||  ||||||||||||||||||||     
T  53577409 ttgaacatcttaaaaataagtggatccataaacatattgccttaaggtcttgggtaagagtgtggtgtctctcttgcaagtgtggttgttctagcctcgg 53577508  T
Q  101 tgtggacggttccccaaactcc 122  Q
    |||||| ||| |||| ||||||    
T  53577509 tgtggatggtcccccgaactcc 53577530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 22303759 - 22303663
Alignment:
Q  14 aagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||| |||||| | |||||||||||||||||| ||||||    
T  22303759 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttctcttacttgtgcgattgttctagcctcgatgtagacggt 22303663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 52634721 - 52634856
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||| ||||||||||||||| | |||||||| |||||||||||||||| |||||||||||||  ||||||||||||||||  ||||||||||||| ||    
T  52634721 ttgaacgccttataagtaagag-acccataaacccattgccttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcagttgttctagccttga 52634819  T
Q  101 tgtggacggttccccaaact-ccccagtgacccaaca 136  Q
    ||| ||| || |||| | || ||||||||||||||||    
T  52634820 tgtagactgtcccccgagctcccccagtgacccaaca 52634856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 32462671 - 32462549
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| |||||||||||  ||||| ||||||||| || ||||||||||| |||||||||| ||||| | ||||| |||||||||    
T  32462671 ttgaacaccttataagtaagatgatccataaacctattgctttaaggttttggataagagtgtggggtctctcttgtttgtgggattgttttagcctcga 32462572  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    ||| |||||  |||||||||||||    
T  32462571 tgtagacgg-cccccaaactcccc 32462549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 45901759 - 45901894
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||| ||||  ||||||||||||||||||||||| ||| |  |||||||||| | ||||    
T  45901759 ttgaacaccttataagtaagaggacgcataaactcatggccttaaagtttttggtaagagtgtggtgtctctcttacttatagggttgttctaacttcga 45901858  T
Q  101 tgtggacggttccccaaactccccagtgacccaaca 136  Q
    |||||||||| |||  |  | |||||||||||||||    
T  45901859 tgtggacggtcccctgacttgcccagtgacccaaca 45901894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 3135542 - 3135453
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccc 115  Q
    |||||||| ||||||||||||||||  | |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  3135542 ccataaacccattgccttaaggttttagataagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtccccc 3135453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 25755439 - 25755562
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| ||||||||||||||||||  ||||||  ||||| | ||| |||  |||||| ||||||| |||||||||||||||| |||||||||||||||||    
T  25755439 ttgaataccttataagtaagaggactcataaatccattgtcctaaagttgtgggtaaaagtgtggcgtctctcttgcttgtgcggttgttctagcctcga 25755538  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||| ||| |||| ||||||||    
T  25755539 tgtggatggtcccccgaactcccc 25755562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 44160657 - 44160526
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||||||  ||||||| ||||| ||||||||| ||  || | |||||||||||||||    
T  44160657 ttgaacaccttataaataagaggatccataaacccattgtcttaaggttt-tggtaagaatgtggcgtctctcttact--tgcgattgttctagcctcga 44160561  T
Q  101 tgtggacggttccccaaa-ctccccagtgacccaa 134  Q
    |||||||||| ||||||| ||||  ||||||||||    
T  44160560 tgtggacggtcccccaaagctccttagtgacccaa 44160526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 1634424 - 1634289
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||| ||||||||||||||| |||||||| ||||| |||||||||| ||||||||||| ||| |||||||  | | | |||||||||||||||||||||    
T  1634424 aacacattataagtaagaggacccataaacccattggcttaaggttttgggtaagagtgcggtatctctctcac-tatatggttgttctagcctcgatgt 1634326  T
Q  104 ggacggttccccaaactccc--cagtgacccaacaaa 138  Q
    ||||||| |||| | |||||  ||||||| |||||||    
T  1634325 ggacggtccccctagctcccctcagtgacacaacaaa 1634289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 4823703 - 4823796
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcct 97  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | |||||| || || |||||||||||    
T  4823703 aacaccttataagtaggaggacccataaactcattgccttaagattttgggtaagagtgtggtgtcttttttgcttatgcggatgttctagcct 4823796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 39389115 - 39389219
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||| || |||||||| |||||||| ||||| |||||||||| ||||||||||||||||||||| |||| ||||   |||||||||||| ||    
T  39389115 ttgaacaccttaaaactaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctcttttgcctgtgcaattgttctagccttga 39389214  T
Q  101 tgtgg 105  Q
    |||||    
T  39389215 tgtgg 39389219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 41359565 - 41359481
Alignment:
Q  40 ccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcccc 124  Q
    ||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||| ||||||||||| ||||| |||||||    
T  41359565 ccttaaggttttgggtaagagtgtggcgtctcttttgcttgtgcggttgttctagcctcaatgtggacggtcccccagactcccc 41359481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 54017638 - 54017538
Alignment:
Q  24 atccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactccc 123  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| || ||| |||| ||||| | |||||||||||| |||| |||| |||||||    
T  54017638 atccataaacccattgccttaaggttttgggtaagagtgtggtgtctctattacttatgtgattgttttggcctcgatgtggtcggtccccctaactccc 54017539  T
Q  124 c 124  Q
    |    
T  54017538 c 54017538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 53118087 - 53117973
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||| ||||||| || |||| |||||||||||| ||| |||||||||||| ||||||||||  |  |||||||||||||||| ||||    
T  53118087 ttgaacaccttataagtgagaggattca-aaacccattgccttaagattttgggtaagagtgtagtgtctctctcacaagtgtggttgttctagcatcga 53117989  T
Q  101 tgtggacggttcccca 116  Q
    |||| ||||| |||||    
T  53117988 tgtgaacggtccccca 53117973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31190062 - 31190161
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||| |||||| |||||        |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  31190062 ttgaacaccttataagttagaggacccata--------gccttaaggttttgggtaagagtgtggtgtctctcttgcttgtcgggttgttctagcctcga 31190153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 9240195 - 9240300
Alignment:
Q  2 tgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgat 101  Q
    ||||||||||||||||||||||| |||||||  |||| ||||||| |||||| ||||| ||||||||||||||   | ||| |||| |||||||||||||    
T  9240195 tgaacaccttataagtaagaggacccataaatccattaccttaagatttcggataagaatgtggtgtctctctcaatagtgcggttattctagcctcgat 9240294  T
Q  102 gtggac 107  Q
    ||||||    
T  9240295 gtggac 9240300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3135186 - 3135099
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttg 88  Q
    ||||||||||||||||||| || | |||||||| || |||| |||||||| | ||||||||||||||||||||||||||||| |||||    
T  3135186 ttgaacaccttataagtaaaagaacccataaacccactgccataaggttttgagtaagagtgtggtgtctctcttgcttgtgcggttg 3135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39914297 - 39914399
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| |||||||| ||||||||  | ||||||||  ||| || ||||||||||||||||||||  ||| || |||||||||||||||||    
T  39914297 ttgaacaccttataaataagaggacccataaacctaatgccttaatattttggataagagtgtggtgtctctctcacttatgcggttgttctagcctcga 39914396  T
Q  101 tgt 103  Q
    |||    
T  39914397 tgt 39914399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 42584935 - 42584823
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||||||||||||  |||| |||||| ||| | | |||||||||||||  ||||| ||| || |||||||||||  || |    
T  42584935 ttgaacaccttataagtaagaggatccataaaccaattgtcttaagattttgagaaagagtgtggtgt--ctcttacttatgcggttgttctagtttcaa 42584838  T
Q  101 tgtggacggttcccc 115  Q
    ||||||||| |||||    
T  42584837 tgtggacggctcccc 42584823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 50612565 - 50612446
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaa-----ctcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagc 95  Q
    ||||||||||||||||||||||||  ||||||     |  |||  |||||||||| ||||||||||||| ||||||||||||||| |||||||||| | |    
T  50612565 ttgaacaccttataagtaagaggactcataaatctaacatattatcttaaggttttgggtaagagtgtgatgtctctcttgcttgagtggttgttccatc 50612466  T
Q  96 ctcgatgtggacggttcccc 115  Q
    ||||| ||||||||| ||||    
T  50612465 ctcgacgtggacggtccccc 50612446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 49336800 - 49336694
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctc-ttgcttgtgtggttgttctagcctcg 99  Q
    |||| ||||||||||||||||||| |||||||| ||| | ||||| |||  |||||||||||||||||||||| ||  ||||| |||||||||| ||||     
T  49336800 ttgaccaccttataagtaagaggacccataaacccatagtcttaaagttctgggtaagagtgtggtgtctctctttttttgtgcggttgttctatcctca 49336701  T
Q  100 atgtgga 106  Q
    |||||||    
T  49336700 atgtgga 49336694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 39336057 - 39336000
Alignment:
Q  27 cataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtg 84  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  39336057 cataaaatcattgccttaaggttttgggtaagagtgtggtgtctctctcgcttgtgtg 39336000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 47964621 - 47964544
Alignment:
Q  11 tataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttg 88  Q
    ||||||| |||||| ||||||||  ||||||||||||||| |||||||||||||| ||||||||  ||||||||||||    
T  47964621 tataagtgagaggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttg 47964544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 8328374 - 8328438
Alignment:
Q  60 gtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcccc 124  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||| || | ||||||||    
T  8328374 gtgtggtgtctctcttgcttgtggggttgttttagcctcgatgtggacggtcccacgaactcccc 8328438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11661996 - 11662099
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttc-gggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    |||||||||||| |||| |||||   |||||||  |||||||||||||||  ||||||||||| |||||||||||   ||||||||||||||||||||||    
T  11661996 ttgaacaccttaaaagtgagaggcctcataaaccaattgccttaaggtttttgggtaagagtgaggtgtctctctca-ttgtgtggttgttctagcctcg 11662094  T
Q  100 atgtg 104  Q
    |||||    
T  11662095 atgtg 11662099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 33175777 - 33175668
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataa---actcattgccttaaggtttcgggtaagag--tgtggtgtctctcttgcttgtgtggttgttctagc 95  Q
    |||||||||||||||||||||| | ||||||   |||||| |||||||||||| |||||||||  ||||  ||||||||  |||||||| ||||||||||    
T  33175777 ttgaacaccttataagtaagagaacccataataaactcatagccttaaggttttgggtaagagtgtgtgacgtctctctcacttgtgtgattgttctagc 33175678  T
Q  96 ctcgatgtgg 105  Q
    |||| |||||    
T  33175677 ctcggtgtgg 33175668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 52634990 - 52635050
Alignment:
Q  6 caccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggt 66  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  52634990 caccttataaataagaggacccataaactcattgccttaagattttgggtaagagtgtggt 52635050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 37726549 - 37726665
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| |||||||||||||||||||||||        |||||| |||||| || ||||||||||  || | |||| ||||| | ||||||||||||||||    
T  37726549 ttgaataccttataagtaagaggatccat--------tgcctttaggttttggataagagtgtgacgtttatcttacttgtatagttgttctagcctcga 37726640  T
Q  101 tgtggacggttccccaaactcccca 125  Q
    |||||||||| |||| |||||||||    
T  37726641 tgtggacggtcccccgaactcccca 37726665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 39336342 - 39336231
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||||| |||||||||||||||||||||| ||||||||| || ||| |||||  || |||||| ||| ||||||||| ||| |||| ||    
T  39336342 ttgaacactttataagtgagaggatccataaactcattgctttaaggttttggataatagtgt--tgcctctctcgctcgtgtggttgctct-gcctgga 39336246  T
Q  101 tgtggacggttcccc 115  Q
    |||||| ||| ||||    
T  39336245 tgtggatggtccccc 39336231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 8327957 - 8328060
Alignment:
Q  9 cttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtg----gttgttctagcctcgatgtg 104  Q
    |||||||||||||| | ||||||||  | ||||||||||||| |||||||||||||||||||||||  |  ||| |    ||||||||||||||||||||    
T  8327957 cttataagtaagagaacccataaacgtaatgccttaaggttttgggtaagagtgtggtgtctctctcacaagtgagtgcagttgttctagcctcgatgtg 8328056  T
Q  105 gacg 108  Q
    ||||    
T  8328057 gacg 8328060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 22304302 - 22304352
Alignment:
Q  65 gtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccc 115  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  22304302 gtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 22304352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33362406 - 33362327
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttg 80  Q
    ||||| |||||||||||||||||| |||||||| |||| ||||||| ||| ||||||| |||  || |||||||||||||    
T  33362406 ttgaataccttataagtaagaggacccataaacccatttccttaagattttgggtaagtgtggcgtctctctcttgcttg 33362327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 46546438 - 46546375
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtg 64  Q
    |||||||| |||||||| |||| |||||||||| |||||||||||||||| | |||||||||||    
T  46546438 ttgaacactttataagttagagaatccataaacccattgccttaaggttttgtgtaagagtgtg 46546375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 43978947 - 43978839
Alignment:
Q  36 attgccttaaggtttcgggtaag----agtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactccc--cagtga 129  Q
    ||||||||||||||| |||||||    ||||||| ||||||||  |||||||| |||||||| ||||||||||||| || |||| | |||||   |||||    
T  43978947 attgccttaaggttttgggtaagctagagtgtggcgtctctctcacttgtgtgtttgttctaacctcgatgtggactgtcccccgagctccctttagtga 43978848  T
Q  130 cccaacaaa 138  Q
    |||||||||    
T  43978847 cccaacaaa 43978839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 7766857 - 7766758
Alignment:
Q  38 tgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccc-aaactcccc-agtgacccaac 135  Q
    |||||||||||||  ||||||| ||||| |||||||   ||||| ||||||||||||||||||||| || ||| |||| |||||||||  ||||||||||    
T  7766857 tgccttaaggttttaggtaagattgtggcgtctctca--cttgtatggttgttctagcctcgatgtagatggtccccctaaactccccttgtgacccaac 7766760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12749214 - 12749316
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||||||||  ||||| ||||||||  ||||| |||||||||  | |||||||||||  || ||||| ||| |||||||||||||| || ||    
T  12749214 ttgaacactttataagtgtgaggacccataaaccaattgcattaaggtttttgataagagtgtggactcactcttacttatgtggttgttctagtctgga 12749313  T
Q  101 tgt 103  Q
    |||    
T  12749314 tgt 12749316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 25317221 - 25317290
Alignment:
Q  19 agaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttg 88  Q
    |||||| |||||||||  |||||||||||||| |||||| ||||| |||| |||||  ||||||||||||    
T  25317221 agaggacccataaacttgttgccttaaggttttgggtaaaagtgtagtgtgtctctcacttgtgtggttg 25317290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 47964994 - 47964921
Alignment:
Q  35 cattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacg 108  Q
    |||||||||||| ||| |||||||||||||| ||||||||  ||| | || ||||||| |||| ||||||||||    
T  47964994 cattgccttaagattttgggtaagagtgtggcgtctctctcacttatatgattgttctggcctagatgtggacg 47964921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 53596030 - 53596078
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| | || ||||||||||| |||||||||||||||||||||||    
T  53596030 ccataaacccgttaccttaaggttttgggtaagagtgtggtgtctctct 53596078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 53596345 - 53596393
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| | || ||||||||||| |||||||||||||||||||||||    
T  53596345 ccataaacccgttaccttaaggttttgggtaagagtgtggtgtctctct 53596393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 3384376 - 3384317
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgt 63  Q
    ||||| ||||||| ||||||| ||||||||| | |||||||| |||| ||||||||||||    
T  3384376 aacactttataaggaagaggacccataaacttaatgccttaaagttttgggtaagagtgt 3384317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 11661603 - 11661638
Alignment:
Q  39 gccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||||||| |||||||||||||||||||||||    
T  11661603 gccttaaggttttgggtaagagtgtggtgtctctct 11661638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 16871047 - 16871005
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgt 68  Q
    |||||||||||||||||||||||||  ||||||||||| ||||    
T  16871047 ccataaactcattgccttaaggttttaggtaagagtgtcgtgt 16871005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 17731992 - 17731950
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgt 68  Q
    |||||||| |||||||||||||||| | |||||||||||||||    
T  17731992 ccataaacccattgccttaaggttttgagtaagagtgtggtgt 17731950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 17735079 - 17735037
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgt 68  Q
    |||||||||||||| |||||||||| ||||||||||| |||||    
T  17735079 ccataaactcattgacttaaggttttgggtaagagtgcggtgt 17735037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 19033223 - 19033181
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgt 68  Q
    |||||||| |||||||||||||||| | |||||||||||||||    
T  19033223 ccataaacccattgccttaaggttttgagtaagagtgtggtgt 19033181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 19036348 - 19036306
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgt 68  Q
    |||||||||||||| |||||||||| ||||||||||| |||||    
T  19036348 ccataaactcattgacttaaggttttgggtaagagtgcggtgt 19036306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 124
Target Start/End: Original strand, 9239940 - 9239981
Alignment:
Q  83 tggttgttctagcctcgatgtggacggttccccaaactcccc 124  Q
    ||||| |||||||||||||||||||||| |||||| ||||||    
T  9239940 tggtttttctagcctcgatgtggacggtcccccaagctcccc 9239981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 16869884 - 16869843
Alignment:
Q  27 cataaactcattgccttaaggtttcgggtaagagtgtggtgt 68  Q
    |||||||||||||||||||||||| | | |||||||||||||    
T  16869884 cataaactcattgccttaaggttttgagcaagagtgtggtgt 16869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 16868473 - 16868433
Alignment:
Q  24 atccataaactcattgccttaaggtttcgggtaagagtgtg 64  Q
    ||||||||||||||||||||||| ||| || ||||||||||    
T  16868473 atccataaactcattgccttaagattttggataagagtgtg 16868433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 115
Target Start/End: Complemental strand, 41360164 - 41360136
Alignment:
Q  87 tgttctagcctcgatgtggacggttcccc 115  Q
    |||||||||||||||||||||||||||||    
T  41360164 tgttctagcctcgatgtggacggttcccc 41360136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 53596545 - 53596593
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| ||||| |||||| |||  ||||||||||||||||||||||    
T  53596545 ccataaacccattgacttaagattttaggtaagagtgtggtgtctctct 53596593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 2843599 - 2843723
Alignment:
Q  1 ttgaacaccttataagtaagaggatcc-ataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  2843599 ttgaacaccttataagtaagaggaccccataaactcattgccttaaggttttgggtaagagtgtggtatctctcttgcttgagtggttgttctagcctcg 2843698  T
Q  100 atgtggacggttccccaaactcccc 124  Q
    ||||||||||| |||| ||||||||    
T  2843699 atgtggacggtccccctaactcccc 2843723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3409304 - 3409407
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3409304 ttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcga 3409403  T
Q  101 tgtg 104  Q
    ||||    
T  3409404 tgtg 3409407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 29518548 - 29518662
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29518548 ttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcga 29518647  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  29518648 tgtggacggtccccc 29518662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 29518965 - 29519079
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29518965 ttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcga 29519064  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  29519065 tgtggacggtccccc 29519079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 32741224 - 32741338
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32741224 ttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcga 32741323  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  32741324 tgtggacggtccccc 32741338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 2377799 - 2377935
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  2377799 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctttcttgcttgagtggtttttctagcctcga 2377898  T
Q  101 tgtggacggttccccaaac-tccccagtgacccaaca 136  Q
    |||||| ||| |||| | | |||||||||||||||||    
T  2377899 tgtggaaggtcccccgagcttccccagtgacccaaca 2377935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 10074476 - 10074371
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  || |||||||||||||||||||||    
T  10074476 ttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcctcga 10074377  T
Q  101 tgtgga 106  Q
    ||||||    
T  10074376 tgtgga 10074371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 16454620 - 16454756
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| ||| || ||||||||||| |||||||||||||||| |||||||||||||||||    
T  16454620 ttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggcgtctctcttgcttgtgcggttgttctagcctcga 16454719  T
Q  101 tgtggacggttccccaaactcccc-agtgacccaaca 136  Q
    |||||||||| |||| | ||||||  |||||||||||    
T  16454720 tgtggacggtcccccgagctcccctcgtgacccaaca 16454756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2578948 - 2578833
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||    
T  2578948 ttgaataccttataaataagaggatccataaactcattaccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgtggttgttctgacctcga 2578849  T
Q  101 tgtggacggttcccca 116  Q
    |||||||||| |||||    
T  2578848 tgtggacggtccccca 2578833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 16454952 - 16455075
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  16454952 ttgaacaccttataagtaataggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcga 16455051  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| |||| | ||||||    
T  16455052 tgtggacggtcccccgagctcccc 16455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 2378171 - 2378285
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||  ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  2378171 ttgaacaccttataagtaagaggacccataaacccattaccttaaggttttaggtaagaatgtggtgtctctcttgcttgagtggttgttctagcctcga 2378270  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  2378271 tgtggacggtccccc 2378285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 2578556 - 2578442
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||||||||||||||| |||||||| ||| |||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  2578556 ttgaacactttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgcggttgttctagcctcga 2578457  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  2578456 tgtggacggtccccc 2578442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3058271 - 3058388
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||| ||||||    
T  3058271 ttgaacaccttataagtatgaggatccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtagggtggttctaacctcga 3058370  T
Q  101 tgtggacggttccccaaa 118  Q
    ||||||| || |||||||    
T  3058371 tgtggaccgtcccccaaa 3058388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10073729 - 10073620
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||  || |||||||||||||||| ||||    
T  10073729 ttgaacaccttataagtaagaggatccataaactcattggcttaagattttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcatcga 10073630  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  10073629 tgtggacggt 10073620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 16107726 - 16107861
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  16107726 aacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgctctagcctcgatgt 16107825  T
Q  104 ggacggttccccaaactccc---cagtgacccaaca 136  Q
    ||  ||| |||| |||||||   |||||||||||||    
T  16107826 gggtggtacccctaactccccttcagtgacccaaca 16107861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 3415503 - 3415642
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgt--tctagcctc 98  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||  |||||||||    
T  3415503 ttgaacaccatataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctcttgcttgtgcggttgttctctagcctc 3415602  T
Q  99 gatgtggacggttccccaaactcccc-agtgacccaacaa 137  Q
    |||||||| ||| |||||| ||||||  ||||||||||||    
T  3415603 gatgtggaaggtcccccaagctccccttgtgacccaacaa 3415642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 1846793 - 1846928
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||| | |||||||  |||||||||||||||| || |||||||||||||||||| ||||||||| |||||||||||||||||    
T  1846793 ttgaacaccttataagtaagagcacccataaatccattgccttaaggttttggataagagtgtggtgtctcttttgcttgtgcggttgttctagcctcga 1846892  T
Q  101 tgtggacggttccccaaactccccagtgacccaaca 136  Q
    |||||||||| |||| | || |||  ||||||||||    
T  1846893 tgtggacggtcccccgagcttccccatgacccaaca 1846928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 2579599 - 2579493
Alignment:
Q  7 accttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgga 106  Q
    |||||||||||||||||  ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  2579599 accttataagtaagagggcccataaactcattgccttaaggttttgggtaaaagtatggtgtctctcttgcttgtgtggttgttctaacctcgatgtgga 2579500  T
Q  107 cggttcc 113  Q
     ||||||    
T  2579499 tggttcc 2579493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3409705 - 3409819
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| |||||||| ||||||||| |  ||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3409705 ttgaacatcttataagtaagaggacccataaacccattgcctttattttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcga 3409804  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  3409805 tgtggacggtccccc 3409819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6999909 - 6999800
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||||||||  |||||||||||||| |||||    
T  6999909 ttgaacaccttatatgtaagaggatccataaactcactgccttaaggttttggataagagtgtggcgtctctcttgctaatgtggttgttctagtctcga 6999810  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  6999809 tgtggacggt 6999800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10074104 - 10073995
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  10074104 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaaagtgtggtgtctctctcgcttatttggttgttctagcctcga 10074005  T
Q  101 tgtggacggt 110  Q
     |||||||||    
T  10074004 cgtggacggt 10073995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 14748451 - 14748341
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||    |||||||||||||||||||||||||||||||    
T  14748451 ttgaacaccttataaataagaggacccataaactcattgcgttaaggttttgggtaagagtgtgg----tctcttgcttgtgtggttgttctagcctcga 14748356  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  14748355 tgtggacggtccccc 14748341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35210249 - 35210358
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||| ||| ||||||||| ||||| |||||||||||    
T  35210249 ttgaacaccttataagtaagaggacccataaaaccattgccttaaggttttgggtaagagtgtggtgtttcttttgcttgtgcggttgctctagcctcga 35210348  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  35210349 tgtggacggt 35210358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 2579985 - 2579863
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||||||||||||||| |||||||| ||  |||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  2579985 ttgaacacattataagtaagaggacccataaacccacagccttaaggttttgggtaagaatgtggtgtctctcttgcttgtgcggttgttctagcctcga 2579886  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||| || ||||||| ||||||    
T  2579885 tgtggaagg-tccccaagctcccc 2579863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1127405 - 1127509
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  ||||||| |||| ||||||||||| |||||||||||||| ||||||||| ||| |||||||| |||| ||||||    
T  1127405 ttgaacaccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctctcttacttatgtggttgctctaacctcga 1127504  T
Q  101 tgtgg 105  Q
    |||||    
T  1127505 tgtgg 1127509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5832139 - 5832031
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||  ||   ||||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  5832139 ttgaacaccttataagtaagaggacccataaagccacc-ccttaagattttgggtaaaagtgtggtgtctctcttacttgtgtggttgttctagcctcga 5832041  T
Q  101 tgtggacggt 110  Q
    ||| ||||||    
T  5832040 tgtagacggt 5832031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10911611 - 10911720
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| |||| |  |||||||||| |||||||||| ||  ||| ||||||| ||||||||    
T  10911611 ttgaacaccttataagtaagaggactcataaactcattgccttaaagttttgaataagagtgtgatgtctctcttactaatgttgttgttcaagcctcga 10911710  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  10911711 tgtggacggt 10911720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 26544094 - 26544230
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||||||||||||||| |||||||| ||  |||||||||||| | ||||||||||| ||||||||||||||||| | ||||||||||||| |    
T  26544094 ttgaacacgttataagtaagaggacccataaacccaccgccttaaggttttgagtaagagtgtgatgtctctcttgcttgtgcgattgttctagcctcaa 26544193  T
Q  101 tgtggacggttccccaaac-tccccagtgacccaaca 136  Q
    |||| |  || |||| | | |||||||||||||||||    
T  26544194 tgtgaagagtcccccgagcttccccagtgacccaaca 26544230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 12092595 - 12092491
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||| ||| |||||||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||  |||||| ||||| ||| |||| ||    
T  12092595 ttgagcactttataagtgagaggatccataaactcattgccttaaggttttgagtaagactgtggtgtctctctcacttgtgaggttgctctggcctgga 12092496  T
Q  101 tgtgg 105  Q
    |||||    
T  12092495 tgtgg 12092491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 2579206 - 2579113
Alignment:
Q  17 taagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    |||||||| |||||||| |||  | |||||| || || |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  2579206 taagaggaaccataaacccataactttaaggctttggctaagagtgtggtgtctctcttgctcgtgtggttgttctagcctcgatgtgcacggt 2579113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 12071765 - 12071681
Alignment:
Q  40 ccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcccc 124  Q
    ||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||| ||| || ||||||    
T  12071765 ccttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatgtgaacggtcccctaagctcccc 12071681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6071177 - 6071264
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttg 88  Q
    |||||||| |||||||| ||| |||||||||||||||||||||||| ||| || ||||||||||| |||||||| |||||| ||||||    
T  6071177 ttgaacactttataagtgagatgatccataaactcattgccttaagattttggataagagtgtggcgtctctctcgcttgtatggttg 6071264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 593822 - 593697
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtgg--tgtctctcttgcttgtgtggttgttctagcctc 98  Q
    ||||||||||||||||||||||||  |||||||  | ||||||||||||| |||||| |||||||  | |||||||| |||||  ||||||||||| |||    
T  593822 ttgaacaccttataagtaagaggactcataaaccgactgccttaaggttttgggtaatagtgtggtatctctctcttacttgtacggttgttctaggctc 593723  T
Q  99 gatgtggacggttccccaaactcccc 124  Q
    ||||| |||||| |||| | ||||||    
T  593722 gatgttgacggtcccccgagctcccc 593697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1950298 - 1950200
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    |||||||||||| ||||||||||| |||||||   | ||||||||||||| | |||||||||||  ||||||||| |||||| ||||||||||||||||    
T  1950298 ttgaacaccttacaagtaagaggagccataaatctaatgccttaaggttttgagtaagagtgtgacgtctctcttacttgtgcggttgttctagcctcg 1950200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 31714732 - 31714836
Alignment:
Q  19 agaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaa 118  Q
    |||||| |||| |||||||||||||||||||| | |||||||||||| || | | | ||||||||||||| |||||||||||||||||||||  |||| |    
T  31714732 agaggacccattaactcattgccttaaggttttgagtaagagtgtggcgttttt-tcgcttgtgtggttgctctagcctcgatgtggacggtctcccaga 31714830  T
Q  119 ctcccc 124  Q
    ||||||    
T  31714831 ctcccc 31714836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16108108 - 16108205
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||            ||||||||||||||||||||||| ||||||| || ||||||    
T  16108108 ttgaacaccttataagtaagaggacccataaacccattgccttaagg------------gtgtggtgtctctcttgcttgtggggttgttataacctcga 16108195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 12085109 - 12085046
Alignment:
Q  39 gccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatg 102  Q
    |||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  12085109 gccttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatg 12085046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32460693 - 32460630
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtg 64  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||| |||||||||||||    
T  32460693 ttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtg 32460630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5958716 - 5958613
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| |||||| |  ||||||||||||| ||||| |||| |||  |||||||| |||||||    |||||||| |||||||| ||||||    
T  5958716 ttgaacaccttataaataagagaactcataaactcattgtcttaaagttttgggatagagtgtgatgtctct----cttgtgtgattgttctaacctcga 5958621  T
Q  101 tgtggacg 108  Q
    ||||||||    
T  5958620 tgtggacg 5958613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8481971 - 8482045
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctctt 75  Q
    |||||||| |||||| | ||| ||  |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  8481971 ttgaacactttataaatgagatgactcataaactcattgccttaagattttgggtaagagtgtggtgtctctctt 8482045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9062462 - 9062383
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgt 81  Q
    ||||||| ||||||||||||||||  ||||||||||||| ||||| |||| |||||| |||||||| |||||||| |||||    
T  9062462 ttgaacatcttataagtaagaggactcataaactcattgtcttaa-gttttgggtaaaagtgtggtatctctcttacttgt 9062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 3409405 - 3409452
Alignment:
Q  60 gtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggac 107  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||    
T  3409405 gtgtggtgtctctcttgcttatgcggttgttctagcctcgatgtggac 3409452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 17135176 - 17135059
Alignment:
Q  7 accttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgga 106  Q
    |||||||||| |||||||| |||||||||||||    || |||| || ||||||||||  | |||| | ||||||| ||||||||  |||| ||||||||    
T  17135176 accttataagcaagaggattcataaactcattgttagaaagttttggataagagtgtgacggctctttcgcttgtgcggttgttccggccttgatgtgga 17135077  T
Q  107 cggttccccaaactcccc 124  Q
    |||| ||||| |||||||    
T  17135076 cggtcccccagactcccc 17135059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 30618727 - 30618634
Alignment:
Q  2 tgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcct 97  Q
    ||||||| |||||||||||| || |||||||| | ||| |||||||||  |||||| | ||||||||||||||| ||| |||||||| ||| ||||    
T  30618727 tgaacactttataagtaagatga-ccataaac-cgttgtcttaaggttatgggtaaaaatgtggtgtctctcttacttatgtggttgctcttgcct 30618634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 10902492 - 10902438
Alignment:
Q  52 gggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgga 106  Q
    |||||||||||||||||||||||  ||||| ||||||||||  ||| ||||||||    
T  10902492 gggtaagagtgtggtgtctctctcacttgtatggttgttctgacctagatgtgga 10902438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 22605343 - 22605301
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgt 68  Q
    |||||||| |||||||||||||||| |||||||| ||||||||    
T  22605343 ccataaacccattgccttaaggttttgggtaagaatgtggtgt 22605301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 11637809 - 11637760
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctctt 75  Q
    |||||||| ||||| |||||| ||| || |||||||||||||||||||||    
T  11637809 ccataaacccattgtcttaagattttggataagagtgtggtgtctctctt 11637760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41157036 - 41157152
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41157036 ttgaacaccttataagtaagaggacccataaactcattgctttaaggttttgggtaagagtgtggtgtctctattgcttgtgtggttgttctagcctcga 41157135  T
Q  101 tgtggacggttccccaa 117  Q
    ||||| |||| ||||||    
T  41157136 tgtgggcggtcccccaa 41157152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 26661635 - 26661515
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  26661635 ttgaacaccttataagtgagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctctcgcttgtgtggttgttcaagcctcga 26661536  T
Q  101 tgtggacggttccccaaactc 121  Q
    | |||||||| |||| |||||    
T  26661535 tatggacggtccccctaactc 26661515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41759528 - 41759637
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  41759528 ttgaacaccttataagtaagatgatccataaatccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttatgtggttgttctagccttga 41759627  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  41759628 tgtggacggt 41759637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 44290571 - 44290434
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||||||| |||||||||| |||||||| ||||||||||  |||||||||||||||||    
T  44290571 ttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtatggtgtctttcttgcttgtacggttgttctagcctcga 44290472  T
Q  101 tgtggacggttccccaaact-ccccagtgacccaacaa 137  Q
    |||||||||| |||| | || |||||||||||||||||    
T  44290471 tgtggacggtcccccgagctcccccagtgacccaacaa 44290434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 44290938 - 44290814
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaa-gagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  44290938 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaagagtgtggtgtatctcttgcttgtgcggttgttctagcctcg 44290839  T
Q  100 atgtggacggttccccaaactcccc 124  Q
    ||||||||||| |||| | ||||||    
T  44290838 atgtggacggtcccccgagctcccc 44290814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41157420 - 41157529
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  41157420 ttgaacaccttataagtaagaggacccataaacccattgcctttaggttttgagtaagagtgtggtgtctgtcttgcttgtgtggttgttctagcctcga 41157519  T
Q  101 tgtggacggt 110  Q
    ||||| ||||    
T  41157520 tgtgggcggt 41157529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 41142417 - 41142532
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaa-gagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  41142417 ttgaacaccttataagtaaaaggacccataaacccattgccttaaggtttttggtaaagagtgtggcgtctctcttgcttgtgtggttgttctagcctcg 41142516  T
Q  100 atgtggacggttcccc 115  Q
    ||||||||||| ||||    
T  41142517 atgtggacggtccccc 41142532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 5320078 - 5319957
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |    
T  5320078 ttgaacaccttataagtgagaggacccataaactcatagccttaaggttttgggtaagagtgtagtgtctctcttgcttatgtggttgttctagcctcaa 5319979  T
Q  101 tgtggacggttccccaaactccc 123  Q
    ||| ||||| ||||||| |||||    
T  5319978 tgtagacgg-tccccaagctccc 5319957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 37556157 - 37556289
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37556157 ttgaacatcttataagtaagagga-ccataaacccatagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcga 37556255  T
Q  101 tgtggacggttccccaaactccccagtgacccaac 135  Q
    ||||| ||||  | | | |||||||||||||||||    
T  37556256 tgtgg-cggtcgctcgagctccccagtgacccaac 37556289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3537712 - 3537603
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||| |||||||||| | |||||| ||||| |||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  3537712 ttgaacaccttatgagtaagaggacctataaacccattggcttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcga 3537613  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  3537612 tgtggacggt 3537603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 40082452 - 40082556
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  40082452 ttgaacaccttataagtaagaggatc-ataaattcattgccttaaggttttgggtaagagtgtggtatctctcttgcttgtgcgtttgttctagcctcga 40082550  T
Q  101 tgtgga 106  Q
    ||||||    
T  40082551 tgtgga 40082556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 48588601 - 48588492
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| || || |||| ||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  48588601 ttgaacaccttataagtaagaagacccgtaaattcattgccttaaggttttgggtaagagtgcggtgtctctcttacttgtgcggttgttctagcctcga 48588502  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  48588501 tgtggacggt 48588492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 34364552 - 34364688
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||| ||||||||||||| ||||||||| |||| || ||||| |||||||||||    
T  34364552 ttgaacaccttataagtaagaggatccgtaaacccatagccttaaggttttgggtaagagtgtgatgtctctctcgcttatgcggttgctctagcctcga 34364651  T
Q  101 tgtggacggttccccaaact-ccccagtgacccaaca 136  Q
    |||||| |||||||  | || ||||||||||||||||    
T  34364652 tgtggatggttccctgagctcccccagtgacccaaca 34364688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 14318912 - 14319032
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| || |||||||   ||||||||||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||| |    
T  14318912 ttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgggtaagagtgtggtgtctctcttatttgtgcggttgttctagcctcaa 14319011  T
Q  101 tgtggacggttccccaaactc 121  Q
    |||||||||| |||| |||||    
T  14319012 tgtggacggtcccccgaactc 14319032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 29798244 - 29798364
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||| | || |||||||||||||||||||||||  |||||||||||||| ||||||    
T  29798244 ttgaacaccttataagtaagaggactcataaacccattgccttaaggtcttggataagagtgtggtgtctctcttgcaagtgtggttgttctaacctcga 29798343  T
Q  101 tgtggacggttccccaaactc 121  Q
    | | |||||| ||||||||||    
T  29798344 tatagacggtcccccaaactc 29798364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31767274 - 31767158
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||| |||  | ||||||||||||| |||||||||||||  |||| ||||||||||||||||||||||| |||||    
T  31767274 ttgaacaccttataagtaagaggacccattaacctaatgccttaaggttttgggtaagagtgtgacgtctatcttgcttgtgtggttgttctagactcga 31767175  T
Q  101 tgtggacggttccccaa 117  Q
    |||||||||| ||||||    
T  31767174 tgtggacggtcccccaa 31767158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 39066313 - 39066178
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| ||||| || ||||||| |||||| |||||||||| || ||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  39066313 ttgaacaccttataactaagatgacccataaaatcattgtcttaaggttttggataagagtgtggtgtctctcttacttatgtggttgttctagccttga 39066214  T
Q  101 tgtggacggttccccaaact-ccccagtgacccaaca 136  Q
    ||| |||||| ||||||||| ||||||||| ||||||    
T  39066213 tgt-gacggtcccccaaactcccccagtgatccaaca 39066178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 66585 - 66462
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||||||||||||  || |||||||||||| |||||||||| | | |||||||| ||||||| ||||||||||||||| |    
T  66585 ttgaacaccttataagtaagaggatccataaacatatggccttaaggttttgggtaagagtatagcgtctctctcgcttgtgcggttgttctagcctcaa 66486  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||||  |||| ||||||    
T  66485 tgtggacggttatccaagctcccc 66462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17294622 - 17294732
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtg-tggttgttctagcctcg 99  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| |||| ||  ||||| ||||||||||    
T  17294622 ttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcgcttatgcaggttgctctagcctcg 17294721  T
Q  100 atgtggacggt 110  Q
    |||||||||||    
T  17294722 atgtggacggt 17294732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38804468 - 38804370
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    |||||||| |||||||||||||||||||||||| |||  ||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  38804468 ttgaacacattataagtaagaggatccataaacccataaccttaaggttttgggtaagagtgtagtgtctctcttgcttgtgcggttgttctagcctcg 38804370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34364970 - 34365083
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||||||||||||||||||||| |||| ||  |||| |||| ||||||    
T  34364970 ttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctcgcttatgcagttgctctaacctcga 34365069  T
Q  101 tgtggacggttccc 114  Q
    |||||| |||||||    
T  34365070 tgtggatggttccc 34365083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 45494077 - 45493972
Alignment:
Q  11 tataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    ||||||||||| ||||||||||| ||||||||||| |||| || ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  45494077 tataagtaagatgatccataaacccattgccttaaagttttggataagagtgtggtgtctctcttccttatgtggttgttcaagcctcgatgtggacggt 45493978  T
Q  111 tcccca 116  Q
     |||||    
T  45493977 ccccca 45493972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 3550765 - 3550872
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||||||   |  |||||||||||||||||    
T  3550765 ttgaacaccttataagtaagaggactcataaacccattgccttaaagttttgggtaagagtgtggtgtctctcttgc---tacggttgttctagcctcga 3550861  T
Q  101 tgtggacggtt 111  Q
    |||||||||||    
T  3550862 tgtggacggtt 3550872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11977325 - 11977444
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||| |  |||||||  | ||||||||||||| ||||||||||||| ||||||||||||  ||| |||||||||||||||||    
T  11977325 ttgaacaccttataagtaagagcactcataaacctaatgccttaaggttttgggtaagagtgtgatgtctctcttgcaagtgcggttgttctagcctcga 11977424  T
Q  101 tgtggacggttccccaaact 120  Q
    |||||||||| |||| ||||    
T  11977425 tgtggacggtcccccgaact 11977444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 24600427 - 24600313
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||  ||||||||||||| |  ||||||||||||| |||||||||| | ||||||||||||||||||||| ||| || ||||||||||||||||||    
T  24600427 ttgaacatattataagtaagagaactcataaactcattgtcttaaggttttgtgtaagagtgtggtgtctctctcgctagtatggttgttctagcctcga 24600328  T
Q  101 tgtggacggttcccc 115  Q
    ||||||| |||||||    
T  24600327 tgtggacagttcccc 24600313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26662011 - 26661921
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttc 91  Q
    ||||||||||||||||| ||| || ||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26662011 ttgaacaccttataagtgagaagacccataaaccgattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttc 26661921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 32168795 - 32168705
Alignment:
Q  17 taagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggac 107  Q
    |||||||| |||||||| ||||||||| |||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  32168795 taagaggacccataaacccattgccttgaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggac 32168705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 3875440 - 3875335
Alignment:
Q  5 acaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtg 104  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||  ||||||| ||||| ||||||||  || |||||||||||||||||||||||||    
T  3875440 acaccttataagtaagaggactcataaacccattgccttaaggttttaggtaagaatgtggagtctctctcactagtgtggttgttctagcctcgatgtg 3875341  T
Q  105 gacggt 110  Q
    ||||||    
T  3875340 gacggt 3875335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32594829 - 32594748
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtg 82  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||    
T  32594829 ttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttacttgtg 32594748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9955953 - 9956057
Alignment:
Q  1 ttgaacaccttataagtaagaggatccat-aaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    |||||||| ||||||||||||||| |||| ||||  ||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  9955953 ttgaacacattataagtaagaggacccattaaaccaattgccttaaggttttgggtaagagtgtgatgtctctcttgcttgtgcggttgctctagcctcg 9956052  T
Q  100 atgtg 104  Q
    |||||    
T  9956053 atgtg 9956057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 22077608 - 22077472
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||||| ||||||||  ||| || |||||||| ||| ||||    
T  22077608 ttgaacaccttataagtaagaggacccataaactcgtagccttaaggttttgggtaagagtgtggcgtctctctcacttatgcggttgttcaagcatcga 22077509  T
Q  101 tgtggacggttccccaaactcccc-agtgacccaaca 136  Q
    | |||||||| |||||  ||||||  |||||||||||    
T  22077508 tatggacggtcccccaggctccccttgtgacccaaca 22077472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24132098 - 24131994
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||||  || |||||||||||||||||||||    
T  24132098 ttgaacaccttataaataaggggatccataaactcattgccttaaggttt-gggta--agtgtggtgtctctctcactagtgtggttgttctagcctcga 24132002  T
Q  101 tgtggacg 108  Q
    ||| ||||    
T  24132001 tgtagacg 24131994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 34649483 - 34649597
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||   || | ||||||||  | ||||||||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||    
T  34649483 ttgaacaccttataagtgcaagaacccataaacctaatgccttaaggttttgggtaagagtgaggcgtctctcttgctagtgtggttgttctagcctcga 34649582  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  34649583 tgtggacggtccccc 34649597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37850713 - 37850604
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||| | ||||||||  | ||  |||||||||||| ||||||||||||||||||||  |||||| ||||| |||||||||||    
T  37850713 ttgaacaccttataagtaagagaacccataaacctaatgttttaaggtttcggataagagtgtggtgtctctctcacttgtgcggttgctctagcctcga 37850614  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  37850613 tgtggacggt 37850604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37555775 - 37555878
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| || ||||||||||||||| || ||||  | | |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37555775 ttgaatacattataagtaagagga-ccttaaatccttagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcga 37555873  T
Q  101 tgtgg 105  Q
    |||||    
T  37555874 tgtgg 37555878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22077223 - 22077108
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||||| || ||||||||||  ||||| ||  ||| || |||||||| ||||||||    
T  22077223 ttgaataccttataagtaagaggacccataaactcattgccctaaggttttggataagagtgtgacgtctccctcacttatgcggttgttcaagcctcga 22077124  T
Q  101 tgtggacggttcccca 116  Q
    |||||||||| |||||    
T  22077123 tgtggacggtccccca 22077108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 45839678 - 45839779
Alignment:
Q  3 gaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatg 102  Q
    ||||||||||||||||||| || |||||||   | ||||||||||||| |||||||| |||||||||||||||||||||| | ||||||| |||||||||    
T  45839678 gaacaccttataagtaagaagacccataaatgtaatgccttaaggttttgggtaagattgtggtgtctctcttgcttgtgggattgttctggcctcgatg 45839777  T
Q  103 tg 104  Q
    ||    
T  45839778 tg 45839779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 45084427 - 45084536
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||  ||      ||||||||| ||||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  45084427 ttgaacaccttataagtaagaggacccataacgtc------ttaaggttttgggtaagagagtggtgtctctcttgcttgtgcggttgttctaacctcga 45084520  T
Q  101 tgtggacggttcccca 116  Q
    || ||||||| |||||    
T  45084521 tgcggacggtccccca 45084536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 50052136 - 50052001
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| ||||||||  |||  ||||| |||| ||||||||||||||||||||||||| || ||| ||||||||| ||||||    
T  50052136 ttgaacatcttataagtaagaggacccataaacctattttcttaaagttttgggtaagagtgtggtgtctctcttgtttatgt-gttgttctaacctcga 50052038  T
Q  101 tgtggacggttccccaaactcccc-agtgacccaaca 136  Q
    ||||||| || |||| | ||||||  |||||||||||    
T  50052037 tgtggacagtcccccgagctcccctcgtgacccaaca 50052001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 11977026 - 11977103
Alignment:
Q  38 tgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccc 115  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||| ||||    
T  11977026 tgccttaaggttttgggtaagagtgtggtgtctctcttgcaagtgcggtagttctagcctcgatgtggacggtccccc 11977103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22077941 - 22077833
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| |||||||||||| |||| ||||||| |||||||||||||| |||||| |  ||| || |||||||| ||| ||||    
T  22077941 ttgaacatcttataagtaagaggacccataaactcatagcct-aaggtttggggtaagagtgtggcgtctctttcacttatgcggttgttcaagcatcga 22077843  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  22077842 tgtggacggt 22077833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 66200 - 66100
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||  || |||||||||||| |||||||||||||| | |||||   ||||| |||||||||| |||||||    
T  66200 ttgaacaccttataagtaagaggacccataaacctatggccttaaggttttgggtaagagtgtggcgcctctc--acttgtatggttgttctggcctcga 66103  T
Q  101 tgt 103  Q
    |||    
T  66102 tgt 66100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44043885 - 44043810
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttg 76  Q
    ||||||||||||||||||||| || |||||||| ||||| |||||| ||| |||||||||||||||||||||||||    
T  44043885 ttgaacaccttataagtaagatgacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctcttg 44043810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 50051776 - 50051658
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcccc- 124  Q
    |||||||| ||||  |||||||||| | ||||||||||||||||||||||| || ||| ||||||||||| |||||||||||||| |||| | ||||||     
T  50051776 ccataaacccattatcttaaggttttgcgtaagagtgtggtgtctctcttgtttatgt-gttgttctagcatcgatgtggacggtccccctagctcccct 50051678  T
Q  125 agtgacccaacaaagacatc 144  Q
     ||||||||||||| |||||    
T  50051677 cgtgacccaacaaatacatc 50051658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22793323 - 22793431
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcatt-gccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    ||||| || |||||||| ||||||||||||||| |||| |||||| ||||| | |||||||||||  ||||||||| |||||||||||||||| |||||     
T  22793323 ttgaaaactttataagtgagaggatccataaacccatttgccttacggttttgagtaagagtgtgacgtctctcttacttgtgtggttgttctggcctca 22793422  T
Q  100 atgtggacg 108  Q
    || ||||||    
T  22793423 atatggacg 22793431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 5575149 - 5575284
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| | |||||  ||| || ||||||||| || ||||||||||| ||||||||  ||| || ||| |||||||||||||    
T  5575149 ttgaacaccttataagtaagaggacctataaatccatagctttaaggttttggataagagtgtggcgtctctct--cttatgaggtagttctagcctcga 5575246  T
Q  101 tgtggacggttccccaaa--ctccccagtgacccaaca 136  Q
    ||||||  || ||||| |  |||| |||||||||||||    
T  5575247 tgtggaatgtcccccagactctcctcagtgacccaaca 5575284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 5528867 - 5528762
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| ||||||| ||||||||  ||||||||||||  |||||||||| ||||||  |||||| |||||||||  || || |||||||||| ||||||    
T  5528867 ttgaacatcttataaataagaggactcataaactcattttcttaaggttttgggtaaatgtgtggcgtctctcttctttatgcggttgttctatcctcga 5528768  T
Q  101 tgtgga 106  Q
    ||||||    
T  5528767 tgtgga 5528762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 30630747 - 30630648
Alignment:
Q  5 acaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtg 104  Q
    |||| ||||||||||||| | |||||||| ||||||||||| |||| ||||||||||| || ||| || |  ||| |||||||||||| |||||||||||    
T  30630747 acactttataagtaagagaacccataaacacattgccttaaagttttgggtaagagtggggcgtccctatcacttatgtggttgttctggcctcgatgtg 30630648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 19283542 - 19283464
Alignment:
Q  27 cataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgg 105  Q
    ||||||||||| |||||||||||| || ||||||||||| ||||||||  |||||| ||||| |||||||| |||||||    
T  19283542 cataaactcatcgccttaaggttttggataagagtgtggcgtctctctcacttgtgcggttgctctagcctggatgtgg 19283464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 21378118 - 21378063
Alignment:
Q  55 taagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    ||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||    
T  21378118 taagagtgtggcgtctatattgcttgtgtggttgttctagcctcaatgtggacggt 21378063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 41184197 - 41184151
Alignment:
Q  5 acaccttataagtaagaggatccataaactcattgccttaaggtttc 51  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||    
T  41184197 acactttataagtaagaggatccataaacccattgccttaaggtttc 41184151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41184538 - 41184488
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttc 51  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  41184538 ttgaacactttataagtaagaggacccataaacccattgccttaaggtttc 41184488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 4956236 - 4956340
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtg--gtgtctctcttgcttgtgtggttgttctagcctc 98  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||| ||||  ||||| ||||||  || | ||||||||||||| | ||| | || ||||    
T  4956236 ttgaacatcttataagtaagaggatccataaactcattgctctaaagttttaggtaaaagtgtgacgtctatctcttgcttgtgcgattgctttaacctc 4956335  T
Q  99 gatgt 103  Q
    |||||    
T  4956336 gatgt 4956340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 44685502 - 44685605
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgt-gtggttgttctagcctcg 99  Q
    ||||| |||||||||||||||||| | |||||||||||||||||| |||| |||||| ||||||  |||| |||  ||||| | ||| |||||| |||||    
T  44685502 ttgaaaaccttataagtaagaggaccaataaactcattgccttaatgttt-gggtaacagtgtgacgtctttctctcttgtgggggtagttctaacctcg 44685600  T
Q  100 atgtg 104  Q
    |||||    
T  44685601 atgtg 44685605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 1188692 - 1188614
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttg 88  Q
    |||||||| ||| ||  |||||||||||||| ||||||||| |||||| ||||||| ||||||||  ||| ||||||||    
T  1188692 ttataagtgagaagactcataaactcattgctttaaggttttgggtaaaagtgtggcgtctctctcacttatgtggttg 1188614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 47380254 - 47380176
Alignment:
Q  27 cataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgg 105  Q
    ||||||||||||||||||| |||| |||||||||||||   |||||||  ||||| |||||| || ||||| |||||||    
T  47380254 cataaactcattgccttaaagttttgggtaagagtgtgacatctctctcacttgtctggttgctcaagcctagatgtgg 47380176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10351205 - 10351278
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| |||||||| |||| | |||||||| |||| | ||||| ||| |||||||||||||| ||||||||    
T  10351205 ttgaacactttataagtgagagaacccataaacacattactttaagattttgggtaagagtgtggcgtctctct 10351278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 41184486 - 41184407
Alignment:
Q  39 gccttaaggtttcgggtaagagtgtggt---gtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccc 115  Q
    |||||||||||| ||||||||||||| |   ||| ||||| |||||| |||||||| ||||||||||| |||||| ||||    
T  41184486 gccttaaggttttgggtaagagtgtgatattgtcgctcttacttgtgcggttgttccagcctcgatgtcgacggtccccc 41184407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 4266855 - 4266802
Alignment:
Q  55 taagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    |||||||||| |||||||||| ||||||  ||||||||||||||||||||| ||||    
T  4266855 taagagtgtgatgtctctcttacttgtg--gttgttctagcctcgatgtgggcggt 4266802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 27086650 - 27086606
Alignment:
Q  145 tgcgcaatggttaccctctcgaatgacatgttggaaagaaatatt 189  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||    
T  27086650 tgcgcaatggttgccctctcgaagtacatgttggaaagaaatatt 27086606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 35154106 - 35154046
Alignment:
Q  11 tataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctc 71  Q
    |||||||||||||  ||||||||| |||| ||||||||||  || ||||||||||||||||    
T  35154106 tataagtaagagggcccataaactgattgtcttaaggtttttggcaagagtgtggtgtctc 35154046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3537260 - 3537228
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  3537260 ttgaacaccttataagtaagaggacccataaac 3537228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5996984 - 5996881
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||  |||||| | |||||||||||| |  |||||  ||||||||| | || ||||||||||||||||||   ||||||||||| |||||||  ||    
T  5996984 ttgaacattttataaatgagaggatccatatatccattgt-ttaaggttttgagtgagagtgtggtgtctctctcatttgtgtggttgctctagccgaga 5996886  T
Q  101 tgtgg 105  Q
    |||||    
T  5996885 tgtgg 5996881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 12466365 - 12466401
Alignment:
Q  38 tgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||||||||  ||||||||||||||||||||||    
T  12466365 tgccttaaggtttttggtaagagtgtggtgtctctct 12466401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 9e-45; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 3669732 - 3669855
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3669732 ttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcga 3669831  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||| ||| |||| | ||||||    
T  3669832 tgtggatggtccccctagctcccc 3669855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 34834924 - 34835026
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34834924 aacaccttataagtaagatgactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 34835023  T
Q  104 gga 106  Q
    |||    
T  34835024 gga 34835026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 34835254 - 34835368
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  34835254 ttgaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcga 34835353  T
Q  101 tgtggacggttcccc 115  Q
    ||| |||||| ||||    
T  34835354 tgtagacggtccccc 34835368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9483300 - 9483187
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||| ||||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  9483300 ttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctcttttgctcgtgcggttgttctagcctcga 9483201  T
Q  101 tgtggacggttccc 114  Q
    ||||||||||||||    
T  9483200 tgtggacggttccc 9483187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 5915928 - 5916034
Alignment:
Q  17 taagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccca 116  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||     
T  5915928 taagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacgg-tccccg 5916026  T
Q  117 aactcccc 124  Q
    ||||||||    
T  5916027 aactcccc 5916034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 34835523 - 34835634
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  34835523 aacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcgatgt 34835622  T
Q  104 ggacggttcccc 115  Q
     |||||| ||||    
T  34835623 agacggtccccc 34835634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 34835789 - 34835900
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  34835789 aacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcgatgt 34835888  T
Q  104 ggacggttcccc 115  Q
     |||||| ||||    
T  34835889 agacggtccccc 34835900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 3670108 - 3670218
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||||||||||||| ||||| ||||||||  ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3670108 aacaccttataagtatgaggacccataaacctatttccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgt 3670207  T
Q  104 ggacggttccc 114  Q
    |||||||||||    
T  3670208 ggacggttccc 3670218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18372107 - 18371993
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||| ||||| ||||||||| |    
T  18372107 ttgaacaccttataagtaagaggatccataaactcattgctttaaggttttgggtaagagtgtggtgtttctctcgcttgtgcggttgctctagcctcaa 18372008  T
Q  101 tgtggacggttcccc 115  Q
    |||| ||||||||||    
T  18372007 tgtgaacggttcccc 18371993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 45122669 - 45122783
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||||    
T  45122669 ttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtatgagtgtggcgtctctcttgcttgtgtggttgttcaagcctcga 45122768  T
Q  101 tgtggacggttcccc 115  Q
    |||||| ||| ||||    
T  45122769 tgtggaaggtccccc 45122783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3038403 - 3038294
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||||||| |||| |||||||| |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  3038403 ttgaacactttataagtaaaaggacccataaacccattgccttaaggttttgggtaagagtgtggcatctctcttgcttgtgtggttgttctagcctcga 3038304  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  3038303 tgtggacggt 3038294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 9309400 - 9309535
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||| |   | ||||||||||||||||||||    
T  9309400 ttgaacaccttataagtaagaggacccttaaactcattgccttaaggtgtcgggtaagagtgtggtgtctctc-tcagtatgtggttgttctagcctcga 9309498  T
Q  101 tgtggacggttccccaaact-ccccagtgacccaaca 136  Q
    |||||||||| |||| | || ||||||||||||||||    
T  9309499 tgtggacggtcccccgagctcccccagtgacccaaca 9309535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9482717 - 9482594
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||| ||| |  |||||||||||| ||||||||||||||| |||||||||||||||||    
T  9482717 ttgaacaccttataagtaagaggacccataaacccattgcctaaagattttgtataagagtgtggtatctctcttgcttgtgcggttgttctagcctcga 9482618  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    ||||||||||||||  ||||||||    
T  9482617 tgtggacggttcccataactcccc 9482594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 40518116 - 40518239
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||  ||| |||||||| || ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  40518116 ttgaacaccttataagtaaatggacccataaacccaatgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgtggttgttctagccttga 40518215  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| |||| | ||||||    
T  40518216 tgtggacggtcccccgagctcccc 40518239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 1014358 - 1014244
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| || ||||||| || |||||| |||| |||||||||||||||||||||| |||||||| |||||||||||||||||    
T  1014358 ttgaacaccttataagtaagaggacccgtaaactcgttaccttaaagttttgggtaagagtgtggtgtctctcctgcttgtgcggttgttctagcctcga 1014259  T
Q  101 tgtggacggttcccc 115  Q
    |||||| ||||||||    
T  1014258 tgtggatggttcccc 1014244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 30441139 - 30441236
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggac 107  Q
    ||||||||||||||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30441139 ttataagtaagagggcccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggac 30441236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 6651555 - 6651674
Alignment:
Q  17 taagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccca 116  Q
    |||||| | ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||| |||||||||||| ||| ||||     
T  6651555 taagagaacccataaattcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcgattgttctaacctcgatgtggatggtccccct 6651654  T
Q  117 aactccccagtgacccaaca 136  Q
    ||||||||| ||||||||||    
T  6651655 aactccccaatgacccaaca 6651674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 6876975 - 6876852
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| ||||| || ||||| |||||||| |||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  6876975 ttgaacaccttataaataagatgacccatacactcattgtcttagggttttgggtaagagtgtggtgtttctcttgtttgtgtggttgttctagcctcga 6876876  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| |||| | ||||||    
T  6876875 tgtggacggtcccccgagctcccc 6876852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 45122170 - 45122067
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||| | |||||||||||||  |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  45122170 ttgaacaccttataagtaagagaacccataaactcattttcttaaggttttgggtaagagtgtggtgtctctcttacttgtggggttgttctagcctcga 45122071  T
Q  101 tgtg 104  Q
    ||||    
T  45122070 tgtg 45122067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 33113472 - 33113371
Alignment:
Q  9 cttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacg 108  Q
    |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||| ||| |||||    
T  33113472 cttataagtaagaggacccataaactcattgccttaagattttgggtaagagtgtggtgtctctcttgctagtgtggttgttctaggctcaatgcggacg 33113373  T
Q  109 gt 110  Q
    ||    
T  33113372 gt 33113371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 40579619 - 40579512
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||||||  |||||||||||||||||||| ||||||||  |||||||||| ||||||    
T  40579619 ttgaacaccttataagtaagaggacccataaacttattgctttaaggttttaggtaagagtgtggtgtctctattgcttgtacggttgttctatcctcga 40579520  T
Q  101 tgtggacg 108  Q
    ||||||||    
T  40579519 tgtggacg 40579512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25561929 - 25561823
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaagg-tttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| ||| |||||||||||||   ||||||||||||||||||||| ||||||||||    
T  25561929 ttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttggggtaagagtgtgacatctctcttgcttgtgtggttgctctagcctcg 25561830  T
Q  100 atgtgga 106  Q
    |||||||    
T  25561829 atgtgga 25561823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 20870686 - 20870577
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| |||||||| || ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| ||| ||    
T  20870686 ttgaacatcttataagtaagaggacccataaacccactgccttaagattttggataagagtgtggtgtctctcttgcttgtgtggttgttctaaccttga 20870587  T
Q  101 tgtggacggt 110  Q
    | ||||||||    
T  20870586 tatggacggt 20870577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 30359316 - 30359429
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||| ||||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||| ||||||  |||||| ||||||| |    
T  30359316 ttgaacaccttataagcaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctttcttgtgatgttgttttagcctcaa 30359415  T
Q  101 tgtggacggttccc 114  Q
    |||||| |||||||    
T  30359416 tgtggatggttccc 30359429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40518627 - 40518736
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| |||||||| |||||||| || || |||||||||| |||||||||||||  ||| |||||||||||||||||||||||||||| |    
T  40518627 ttgaacaccttataaataagaggacccataaacccaatgacttaaggttttgggtaagagtgtgacgtcactcttgcttgtgtggttgttctagcctcaa 40518726  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  40518727 tgtggacggt 40518736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9608790 - 9608898
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| || |||||||| |||  ||||||||||| ||||| |||||||| |||||||||||| ||| |||||||||||||||||    
T  9608790 ttgaacaccttataagtaagatgacccataaacccatcaccttaaggttttgggtatgagtgtggcgtctctcttgctagtgaggttgttctagcctcga 9608889  T
Q  101 tgtggacgg 109  Q
    |||||||||    
T  9608890 tgtggacgg 9608898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 6731953 - 6732074
Alignment:
Q  14 aagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcc 113  Q
    ||||||||| | ||||||| ||||||||||||||||| | |||||||||||||||||||||||||| || |||||||||| ||||||||||||  | |||    
T  6731953 aagtaagagaacccataaattcattgccttaaggttttgagtaagagtgtggtgtctctcttgcttatgcggttgttctaacctcgatgtgga-tgatcc 6732051  T
Q  114 ccaaactccccagtgacccaaca 136  Q
    || ||||||||| ||||||||||    
T  6732052 cctaactccccaatgacccaaca 6732074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1514028 - 1513913
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| || ||||| |||  ||||||||||| |||||| |||||||| |||||||| | |||| |||| ||||||||||||    
T  1514028 ttgaacaccttataagtaagaggacccttaaacccataaccttaaggttttgggtaaaagtgtggtatctctcttacatgtggggttattctagcctcga 1513929  T
Q  101 tgtggacggttcccca 116  Q
    |||||||||| |||||    
T  1513928 tgtggacggtccccca 1513913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 37544603 - 37544496
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||||||| ||||||| |||||||  |||| | ||||||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  37544603 ttgaacacattataagaaagaggacccataaatccattactttaaggttttgggtaagagtgtggtgtctttcttacttgtgcggttgttctagcctcga 37544504  T
Q  101 tgtggacg 108  Q
    ||||||||    
T  37544503 tgtggacg 37544496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 45122023 - 45121908
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||||||||||||  |||||||||||||||||||| ||| |||||| ||||||| |||||| ||||| |||||||| ||| ||||||||    
T  45122023 ttgaacactttataagtaagaggactcataaactcattgccttaagattttgggtaacagtgtggcgtctcttttgctcgtgtggttattcaagcctcga 45121924  T
Q  101 tgtggacggttcccca 116  Q
    |||||| ||| |||||    
T  45121923 tgtggaaggtccccca 45121908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 30359654 - 30359764
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  ||||||| |||  ||||||| ||| |||||||||||||||||||||||| ||| || |||||||||| | ||||    
T  30359654 ttgaacaccttataagtaagaggactcataaacccataaccttaagattttgggtaagagtgtggtgtctctcttacttatgcggttgttctaacttcga 30359753  T
Q  101 tgtggacggtt 111  Q
    |||||||||||    
T  30359754 tgtggacggtt 30359764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 70387 - 70278
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| |||||||| || |||||||||||||  ||||||||||||  |||| |||||||||||||||||||||| |||| |    
T  70387 ttgaacatcttataagtaagaggacccataaacccactgccttaaggttttaggtaagagtgtgacgtctatcttgcttgtgtggttgttctaacctcaa 70288  T
Q  101 tgtggacggt 110  Q
    || |||||||    
T  70287 tgcggacggt 70278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8918877 - 8918768
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||||||||||||||| ||||||||  |||| |||||||||| |||||||||||||  |||| |||||| |||||||||||| || ||||||    
T  8918877 ttgaacactttataagtaagaggacccataaacctattgacttaaggttttgggtaagagtgtgacgtctttcttgcgtgtgtggttgttttaacctcga 8918778  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  8918777 tgtggacggt 8918768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 147496 - 147600
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| |||||||| ||||||||  |||||||||| |||| |||||||||||||| |||||||||||||||| ||| |||||||| | ||    
T  147496 ttgaacaccttataaataagaggacccataaacctattgccttaaagttttgggtaagagtgtggcgtctctcttgcttgtgcggtagttctagcattga 147595  T
Q  101 tgtgg 105  Q
    |||||    
T  147596 tgtgg 147600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1013984 - 1013874
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||| |||||||||||||| | |||||| ||||||||||  |||| | ||||||||||| ||||||| || |||||| |||||||||||||||||    
T  1013984 ttgaacaccctataagtaagaggaccaataaacccattgccttagagttttgagtaagagtgtgttgtctcttttacttgtgcggttgttctagcctcga 1013885  T
Q  101 tgtggacggtt 111  Q
    |||||| ||||    
T  1013884 tgtggatggtt 1013874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 8919220 - 8919142
Alignment:
Q  38 tgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccca 116  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||    
T  8919220 tgccttaaggttttggataagagtgtggtgtctcttttgcttgtgtggttgttctagcttcgatgtggacggtccccca 8919142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 45121769 - 45121663
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||| ||||||||||||||||||||||||||||  |  |||||||||||| | ||||||||||| | |||||||| ||| || |||||||||||||||||    
T  45121769 ttgatcaccttataagtaagaggatccataaacctacagccttaaggttttgagtaagagtgtgatatctctcttacttatggggttgttctagcctcga 45121670  T
Q  101 tgtggac 107  Q
    |||||||    
T  45121669 tgtggac 45121663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 40579348 - 40579259
Alignment:
Q  35 cattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcccc 124  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||| | ||||||    
T  40579348 cattgccttaggattttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggactgtcccccgagctcccc 40579259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 32640630 - 32640542
Alignment:
Q  16 gtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtg 104  Q
    ||||||||| | |||||| |||||||||||||||| |||||||||||| | ||||||||||||| |||| |||||||||||||||||||    
T  32640630 gtaagaggaccgataaacccattgccttaaggttttgggtaagagtgttgcgtctctcttgcttttgtgattgttctagcctcgatgtg 32640542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 41972203 - 41972341
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcg---ggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcct 97  Q
    ||||||||||||||||| | |||| |||||||| ||||||| ||| |||| |   ||||||||||||| ||| ||||||||||||||||||||| |||||    
T  41972203 ttgaacaccttataagtgataggacccataaacccattgccataaagttttgttgggtaagagtgtggcgtcactcttgcttgtgtggttgttccagcct 41972302  T
Q  98 cgatgtggacggttccccaaactccccagtgacccaaca 136  Q
    | || ||||||||  ||| ||||||||  ||||||||||    
T  41972303 caatatggacggtctcccgaactcccccatgacccaaca 41972341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 9309024 - 9309160
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaag---agtgtggtgtctctcttgcttgtgtggttgttctagcct 97  Q
    |||||||  ||||||||||||||| |||||||| |||||||| ||||||| ||| |||   ||||||||||||||||  | | |||||||||||||||||    
T  9309024 ttgaacatgttataagtaagaggacccataaacccattgcctaaaggttttgggcaagagtagtgtggtgtctctctcac-tatgtggttgttctagcct 9309122  T
Q  98 cgatgtggacggttccccaaact-ccccagtgacccaa 134  Q
    ||||||||||||| |||| | || ||||||||||||||    
T  9309123 cgatgtggacggtcccccgagctcccccagtgacccaa 9309160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5420696 - 5420802
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| ||||||||||||||||  ||||||| ||||||||||||||||   |||||||||||  ||||| ||  ||||||||||||||| ||||||||    
T  5420696 ttgaacatcttataagtaagaggactcataaacccattgccttaaggttttttgtaagagtgtgacgtctccctcacttgtgtggttgttcaagcctcga 5420795  T
Q  101 tgtggac 107  Q
    |||||||    
T  5420796 tgtggac 5420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9507827 - 9507933
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| ||||||||||||||||||  ||||||| |||| ||||||||||| |||||||||||||| |||||| |  ||| | ||||||||| ||||||||    
T  9507827 ttgaataccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctctatctcttatatggttgttcaagcctcga 9507926  T
Q  101 tgtggac 107  Q
    |||||||    
T  9507927 tgtggac 9507933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 41129067 - 41129148
Alignment:
Q  35 cattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccca 116  Q
    ||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||||| | |||||||||||||||| |||||    
T  41129067 cattgtcttaaggttttgggtatgagtgtggtgtctctcttacttgtgtggttgttcaaacctcgatgtggacggtccccca 41129148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9609130 - 9609222
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttcta 93  Q
    ||||||| ||||||||||||| || |||||||| ||| ||||||| ||||  ||||||||||||| |||||||||||| ||||||||||||||    
T  9609130 ttgaacatcttataagtaagatgacccataaacccatcgccttaatgttttcggtaagagtgtggcgtctctcttgctagtgtggttgttcta 9609222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 16697994 - 16698046
Alignment:
Q  202 ccaaaaatttagctagataatatagttattttttaacatttgggttgatgatg 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16697994 ccaaaaatttagctagataatatagttattttttaacatttgggttgatgatg 16698046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 147890 - 147968
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtg 104  Q
    ||||||||  ||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||| |||||    
T  147890 ccataaacctattgccttaaggttttgggtaagagtgtggtgtctctcttacttgtgcagttgttctagcctcaatgtg 147968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 18371761 - 18371660
Alignment:
Q  13 taagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttc 112  Q
    ||||||||| || |||||||| ||| |||||||||||| ||||||||||||||||| |||||   ||||| ||||| |||||| ||||||||||||||||    
T  18371761 taagtaagaagacccataaacccat-gccttaaggttttgggtaagagtgtggtgtgtctctcatttgtgcggttgctctagcttcgatgtggacggttc 18371663  T
Q  113 ccc 115  Q
    |||    
T  18371662 ccc 18371660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 4154779 - 4154678
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||| |||||||  ||||||||||||| ||| |||| ||    
T  4154779 ttgaacactttataagtgaaaggacccataaactcattgccccaaggttttgggtaagagtgtggcgtctctc--gcttgtgtggttgctctggcctaga 4154682  T
Q  101 tgtg 104  Q
    ||||    
T  4154681 tgtg 4154678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 43274697 - 43274612
Alignment:
Q  52 gggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactccc-cagtgacccaaca 136  Q
    ||||| |||||||||||||||||| ||| || |||||||| |||||||||||||||||| |||| | ||||| |||||||||||||    
T  43274697 gggtatgagtgtggtgtctctcttacttatggggttgttccagcctcgatgtggacggtcccccgagctcccacagtgacccaaca 43274612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 32305522 - 32305645
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| || | |||||| |||| ||||||| ||| || ||||||||||| |||| | || ||| ||  ||||||||| ||| ||    
T  32305522 ttgaacaccttataagtaagaagacctataaacccattaccttaagattttggataagagtgtggcgtctttattacttatgcagttgttctaaccttga 32305621  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| ||||  |||||||    
T  32305622 tgtggacggtccccctgactcccc 32305645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 12283957 - 12284030
Alignment:
Q  41 cttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccc 114  Q
    |||||||||| || ||||||||| ||||||||||  |||||||||||||||||||||| ||||||  |||||||    
T  12283957 cttaaggttttggataagagtgtagtgtctctctcacttgtgtggttgttctagcctctatgtgggtggttccc 12284030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 45123061 - 45123165
Alignment:
Q  13 taagtaagaggatccataaactcattgccttaaggtttcgggtaagag--tgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    ||||||||| || ||||||||  |||  |||||||||| |||||||||  |||||||||||||||  ||||| ||||||||||  |||||||||||||||    
T  45123061 taagtaagatgacccataaacctattttcttaaggttttgggtaagagagtgtggtgtctctcttatttgtggggttgttctaatctcgatgtggacggt 45123160  T
Q  111 tcccc 115  Q
     ||||    
T  45123161 ccccc 45123165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 9620789 - 9620677
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||| ||| |||||||| |||||| ||||||||||||||||||||| |||    ||||||| || |||||||||  |||||||||||| ||  |||| ||    
T  9620789 ttgatcactttataagtgagaggacccataaactcattgccttaagattt--tataagagtttgatgtctctctcacttgtgtggttgctcaggcctgga 9620692  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  9620691 tgtggacggtccccc 9620677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 18372342 - 18372283
Alignment:
Q  56 aagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccc 115  Q
    ||||||||||||||||||| ||||||| ||||| | ||| ||||||||||||||||||||    
T  18372342 aagagtgtggtgtctctctcgcttgtgcggttgctttagtctcgatgtggacggttcccc 18372283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18380130 - 18380026
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||| ||  | |||||| || | ||||||||||| | ||||||||||||||   |||||||||||| | || ||||||| ||||    
T  18380130 ttgaacaccttataagtaagggggcctataaacccactaccttaaggttttgagtaagagtgtggtg--cctcttgcttgtgcgattcttctagcttcga 18380033  T
Q  101 tgtggac 107  Q
    |||||||    
T  18380032 tgtggac 18380026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 3038016 - 3037944
Alignment:
Q  67 gtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactccc---cagtgacccaaca 136  Q
    ||||||||  |||||||||||||||||||||||||||||||||| |||| | |||||   |||||||||||||    
T  3038016 gtctctctatcttgtgtggttgttctagcctcgatgtggacggtcccccgagctccccctcagtgacccaaca 3037944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 20995495 - 20995433
Alignment:
Q  35 cattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcct 97  Q
    |||||||||||||||| |||||||| ||||||||||||||  |||||||||||| ||| ||||    
T  20995495 cattgccttaaggttttgggtaagaatgtggtgtctctctcacttgtgtggttgctctggcct 20995433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 16524446 - 16524503
Alignment:
Q  37 ttgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctag 94  Q
    |||| ||||||||| | |||||||||||||||||||||| |||||||||||| |||||    
T  16524446 ttgctttaaggttttgagtaagagtgtggtgtctctcttacttgtgtggttgctctag 16524503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 16697926 - 16697971
Alignment:
Q  145 tgcgcaatggttaccctctcgaatgacatgttggaaagaaatattt 190  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||    
T  16697926 tgcgcaataattaccctctcgaatgacatgttggaaagaaatattt 16697971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 4154393 - 4154290
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||||| |||| | ||||||||||||||||||||  ||| ||||||| ||||| |||||||||   |||| |||||| ||| |||| ||    
T  4154393 ttgaacactttataagtgagag-acccataaactcattgccttaatattttgggtaagtgtgtgatgtctctctcaattgtttggttgctctggcctaga 4154295  T
Q  101 tgtgg 105  Q
    |||||    
T  4154294 tgtgg 4154290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 43274883 - 43274824
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtc 69  Q
    ||||||||||||||| ||||||||  |||| |||||||||| | ||||||||||||||||    
T  43274883 ttataagtaagaggacccataaacctattgtcttaaggttttgagtaagagtgtggtgtc 43274824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 43398184 - 43398077
Alignment:
Q  1 ttgaacaccttataagtaagaggat---ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcct 97  Q
    ||||||||||||||| ||||||||    ||||||| |||||||||||| |||| || ||||| ||||| || ||| || || ||| ||||| |||| |||    
T  43398184 ttgaacaccttataaataagaggaggacccataaattcattgccttaaagttttggataagaatgtggcgtttcttttactagtgcggttgctctaacct 43398085  T
Q  98 cgatgtgg 105  Q
    ||||||||    
T  43398084 cgatgtgg 43398077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 41416284 - 41416252
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaac 33  Q
    |||||||||||||||||||||||||||||||||    
T  41416284 ttgaacaccttataagtaagaggatccataaac 41416252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5274820 - 5274907
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttg 88  Q
    |||||||| |||||| |  || || ||||||| ||||||||||||| ||| | ||||||||||| ||||||| | |||||||| ||||    
T  5274820 ttgaacactttataaatgggaagacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctatcgcttgtgttgttg 5274907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18373283 - 18373236
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggt 48  Q
    ||||||||||||||| ||||||||||||| ||| ||||| ||||||||    
T  18373283 ttgaacaccttataaataagaggatccattaacccattgtcttaaggt 18373236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3037821 - 3037776
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaag 46  Q
    ||||||||||||||||||||||||  ||||||| ||||| ||||||    
T  3037821 ttgaacaccttataagtaagaggactcataaacccattgtcttaag 3037776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8794156 - 8794229
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    ||||||| ||||||||||||||||  |||||||  | |  |||||||||| |||| |||||| |||||||||||    
T  8794156 ttgaacatcttataagtaagaggactcataaacctaatatcttaaggttttgggtgagagtgcggtgtctctct 8794229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18373044 - 18372988
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagag 60  Q
    ||||||||||||||| ||||||||  |||||||||||||||   |||||| |||||||||    
T  18373044 ttgaacaccttataaataagaggactcataaactcattgcc---aggttttgggtaagag 18372988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 9e-45; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 34753138 - 34753003
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| || ||||||||  ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  34753138 ttgaacaccttataagtaagaagacccataaaccgattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcga 34753039  T
Q  101 tgtggacggttccccaaactccccagtgacccaaca 136  Q
    ||||||||||| ||||| ||||||  ||||||||||    
T  34753038 tgtggacggtttcccaagctcccccatgacccaaca 34753003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 40296428 - 40296313
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40296428 ttgaacaccttataagtaagaggacccataaacccattgccttgaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcga 40296329  T
Q  101 tgtggacggttcccca 116  Q
    |||||||||| |||||    
T  40296328 tgtggacggtccccca 40296313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6500495 - 6500610
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |  ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6500495 ttgaacaccttataagtaagaggacctttaaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcga 6500594  T
Q  101 tgtggacggttcccca 116  Q
    |||||||||| |||||    
T  6500595 tgtggacggtccccca 6500610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 18603233 - 18603122
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  18603233 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcatctctcttgcttgtgtggtagttctagcctcga 18603134  T
Q  101 tgtggacggttc 112  Q
    ||||||||||||    
T  18603133 tgtggacggttc 18603122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 3295457 - 3295335
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||    
T  3295457 ttgaacaccttataagtaagaggacccataaaccaattgccttaaggttttgg-taagagtgtgttgtctctcttgcttgtgtggttgttctagcctcga 3295359  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| ||||  |||||||    
T  3295358 tgtggacggtccccctcactcccc 3295335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 25327980 - 25328117
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||  | ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  25327980 ttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaagagtgtggtgtctctcttgcaagtgtggttgttctagcctcaa 25328079  T
Q  101 tgtggacggttccccaaactccc--cagtgacccaaca 136  Q
    |||||||||| |||| | |||||  |||||||||||||    
T  25328080 tgtggacggtcccccgagctcccctcagtgacccaaca 25328117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 36492330 - 36492221
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| | |||||| |||| |||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  36492330 ttgaacaccttataagtaagaggaccaataaacacattacctttaggttttggataagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 36492231  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  36492230 tgtggacggt 36492221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6500867 - 6500982
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||||| || ||||||||||||||||||||| |||||| |||| ||||||||||||    
T  6500867 ttgaacaccttataaataaaaggacccataaactcattgccttaaggttttggataagagtgtggtgtctctcttacttgtgcggttattctagcctcga 6500966  T
Q  101 tgtggacggttcccca 116  Q
    |||||||||| |||||    
T  6500967 tgtggacggtccccca 6500982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 624241 - 624378
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||||||||| || |||||||| ||| ||||| |||||| |||||||||||||||||||||||  |||||| |||||||||||||||||    
T  624241 ttgaacacgttataagtaagatgacccataaacccatagccttgaggttttgggtaagagtgtggtgtctctctcacttgtggggttgttctagcctcga 624340  T
Q  101 tgtggacggttccccaaactcccc--agtgacccaaca 136  Q
    ||||||||||||||| | ||||||  ||||||||||||    
T  624341 tgtggacggttccccgagctccccctagtgacccaaca 624378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 41170679 - 41170793
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||     
T  41170679 ttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttcttgcttgtgtggttgttctagcctcgg 41170778  T
Q  101 tgtggacggttcccc 115  Q
    ||| |||||| ||||    
T  41170779 tgtagacggtccccc 41170793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15370447 - 15370556
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||||| | |||||||||||| |||||||||| ||||| |||||||||||||||||    
T  15370447 ttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgcgtaagagtgtggcgtctctcttgtttgtggggttgttctagcctcga 15370546  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  15370547 tgtggacggt 15370556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 27502146 - 27502009
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||||||||||||||||||| ||||||||  ||||||||||| |||  ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  27502146 aacaccttataagtaagaggacccataaacctattgccttaagatttttggtaaaagtgtggtgtctctcttgcttgtgtggttgttctatcctcgatgt 27502047  T
Q  104 ggacggttccccaaactcccc-agtgacccaacaaaga 140  Q
    ||||||| |||| | ||||||   ||||||||||||||    
T  27502046 ggacggtccccctagctcccctcatgacccaacaaaga 27502009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 15370144 - 15370267
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| |||||||  ||  |||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||    
T  15370144 ttgaacatcttataagtaagaggacccataaatccacagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgggattgttctagcctcga 15370243  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| |||| | ||||||    
T  15370244 tgtggacggtcccccgagctcccc 15370267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 33747825 - 33747928
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacgg 109  Q
    ||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||| ||| || |||||||||||||| |||||||||||    
T  33747825 ttataagtaagaggatccataaactcattgccttaagattttggataagagtgtggtgtctctcttccttatgcggttgttctagccttgatgtggacgg 33747924  T
Q  110 ttcc 113  Q
    ||||    
T  33747925 ttcc 33747928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41632827 - 41632942
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| || ||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  41632827 ttgaacaccttataagtaagaggacccataaacccaatgctttaagattttgggtaagagtgtggtgtctctcttgcttgtgcggttgttttagtctcga 41632926  T
Q  101 tgtggacggttcccca 116  Q
    |||||||||| |||||    
T  41632927 tgtggacggtccccca 41632942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3295128 - 3295022
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| || |||||||| ||||||||| |||||| ||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  3295128 ttgaacaccttataagtaagaagacccataaacccattgccttgaggttttgggtatgagtgtggtgtctctcttggttgtgtggttgttgtagcctcga 3295029  T
Q  101 tgtggac 107  Q
    |||||||    
T  3295028 tgtggac 3295022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11417090 - 11416976
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||| | |||||||||| ||||    
T  11417090 ttgaacaccttataagtaagaggatccataaacccattgccttaaggttttgtgtaagagtgtgatctctctcttgcttgtgggattgttctagcttcga 11416991  T
Q  101 tgtggacggttcccc 115  Q
    |||||| ||| ||||    
T  11416990 tgtggatggtccccc 11416976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 26591023 - 26590909
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||| | |||||||||||| ||||||||  || |||||||||||||| ||||||    
T  26591023 ttgaacaccttataagtaagaggatccataaattcaatgccttaaggttttgagtaagagtgtggcgtctctctcactagtgtggttgttctaacctcga 26590924  T
Q  101 tgtggacggttcccc 115  Q
    |||||| ||||||||    
T  26590923 tgtggatggttcccc 26590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 26074657 - 26074761
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||  || ||||||||| |||| ||||||    
T  26074657 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgctctaacctcga 26074756  T
Q  101 tgtgg 105  Q
    |||||    
T  26074757 tgtgg 26074761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32487439 - 32487554
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||||  || |||||||||| ||||||||||||||||||||    
T  32487439 ttgaacacct-ataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgacgtatctcttgcttatgtggttgttctagcctcga 32487537  T
Q  101 tgtggacggttccccaa 117  Q
    |||||| ||| ||||||    
T  32487538 tgtggatggtcccccaa 32487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 13415873 - 13415774
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||  ||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  13415873 ttgaacaccttataagtaagaggacccataaacctattaccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcga 13415774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 42405709 - 42405572
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||| |||||| ||||  |||||||  | ||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||    
T  42405709 ttgaacaccttacaagtaaaaggactcataaacctaatgccttaaggttttgggtaagagtgtggtgt--ctcttgcttgtgcggttgttctagcctcga 42405612  T
Q  101 tgtggacggttccccaaact--ccccagtgacccaacaaa 138  Q
    |||||||||| |||| | ||  ||||||||||||||||||    
T  42405611 tgtggacggtcccccgagctccccccagtgacccaacaaa 42405572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6224241 - 6224356
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||| |||  ||||||||| ||||| ||||||||| |    
T  6224241 ttgaacaccttataagtaagaggacccataaactcatcgccttaaggtttttggtaagagtgtggtgcctcagttgcttgtgcggttggtctagcctcaa 6224340  T
Q  101 tgtggacggttcccca 116  Q
    | |||||||| |||||    
T  6224341 tatggacggtccccca 6224356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9498767 - 9498645
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||||| || ||| | || ||||||||| |    
T  9498767 ttgaacaccttataagtaagaggacccataaacccattgccttaagattttgggtaagagtgtggtgtctctcttgtttatgt-gctggtctagcctcaa 9498669  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| |||| | ||||||    
T  9498668 tgtggacggtccccctagctcccc 9498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26075275 - 26075168
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggt-aagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||  |||||||||||  ||||||||||| ||||||||    
T  26075275 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaagagtgtgtcgtctctcttgcaagtgtggttgttttagcctcg 26075176  T
Q  100 atgtggac 107  Q
    ||||||||    
T  26075175 atgtggac 26075168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 299534 - 299640
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||||| | |||||||||||| |||||| ||||||||  |||||||||||| ||||    
T  299534 ttgaacaccttataagtaagatgacccataaactcatagccttaaggttttgtgtaagagtgtggcgtctctattgcttgtacggttgttctagcatcga 299633  T
Q  101 tgtggac 107  Q
    |||||||    
T  299634 tgtggac 299640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 1028629 - 1028493
Alignment:
Q  2 tgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgat 101  Q
    ||||||| ||||||||||||||| ||||||||  ||  |||||||||||  ||||||||||||| ||||||||  |||||| ||||||||||||||||||    
T  1028629 tgaacactttataagtaagaggacccataaacctataaccttaaggtttttggtaagagtgtggcgtctctctcacttgtgcggttgttctagcctcgat 1028530  T
Q  102 gtggacggttccccaaactccc--cagtgacccaaca 136  Q
    ||||||||| |||| | |||||  |||||||||||||    
T  1028529 gtggacggtccccctagctcccctcagtgacccaaca 1028493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 623863 - 623998
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||| |||||||  || ||||||||| || |||||||||||| | |||||||||||||||||||||  |||||| ||||||||||||||| |    
T  623863 ttgaacactttacaagtaagttgagccataaacttatagccttaaggttttgagtaagagtgtggtgtctctctcacttgtggggttgttctagcctcaa 623962  T
Q  101 tgtggacggttccccaaactccccagtgacccaaca 136  Q
    ||| |||||| |||| | |||| |||||||||||||    
T  623963 tgtagacggtcccccgagctcctcagtgacccaaca 623998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 26900089 - 26899994
Alignment:
Q  42 ttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactccccagtgacccaacaa 137  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||| |||||| ||||||  |||||||||||    
T  26900089 ttaaggttttgggtaagagtgtggtgtctctcttgcttgtgggtttgttctagccttgatgtggacggtcccccaagctcccccatgacccaacaa 26899994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 26074259 - 26074155
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||| ||| ||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||||  || ||||||||| |||| ||||||    
T  26074259 ttgaacacctcatatgtaagaggacccatgaacccattgccttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgctctaacctcga 26074160  T
Q  101 tgtgg 105  Q
    |||||    
T  26074159 tgtgg 26074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 36568680 - 36568559
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||| ||| || || ||||| ||||||||||||||||  ||||||||||||| ||||||||  ||||||||||||||||| ||||||    
T  36568680 ttgaacaccttataagtgagatgacccgtaaacccattgccttaaggtttttggtaagagtgtggcgtctctct--cttgtgtggttgttctatcctcga 36568583  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||| ||| |||| | ||||||    
T  36568582 tgtggaaggtcccccgagctcccc 36568559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 35150052 - 35150157
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||| | |||||||  ||||| |||||||||| |||||| ||||||||||||||||  || |||||||||||||| |||| |    
T  35150052 ttgaacaccttataagtaagag-acccataaatccattgtcttaaggttttgggtaaaagtgtggtgtctctctcactagtgtggttgttctaacctcaa 35150150  T
Q  101 tgtggac 107  Q
    |||||||    
T  35150151 tgtggac 35150157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 29549367 - 29549278
Alignment:
Q  2 tgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttc 91  Q
    |||||||| ||||||||||| || |||||||| |||| ||||||||||| || ||||||||||| ||||||||||||| |||||||||||    
T  29549367 tgaacaccatataagtaagaagacccataaacacattaccttaaggttttggataagagtgtggcgtctctcttgcttatgtggttgttc 29549278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 24489314 - 24489181
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    |||||||||| |||||||  | |||||||| |||||||||||| ||| | |||||||||||| |||||| || |||||| ||||||||||| ||||||||    
T  24489314 aacaccttattagtaaga--acccataaacccattgccttaagattttgcgtaagagtgtggcgtctcttttacttgtgcggttgttctagtctcgatgt 24489217  T
Q  104 ggacggttccccaaactcccc-agtgacccaacaaa 138  Q
    || |||| || || |||||||  |||||||||||||    
T  24489216 gggcggtccctcagactcccctcgtgacccaacaaa 24489181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 2411052 - 2411175
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| ||| |||||||||| | ||||||||| ||||||||||||||| | |||||||||| || ||||| || ||||  || |||||||| ||||||    
T  2411052 ttgaacatcttgtaagtaagagaacccataaacttattgccttaaggttttgagtaagagtgtagtttctctattacttgaatgattgttctaacctcga 2411151  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    | |||||||| |||||| ||||||    
T  2411152 tatggacggtcccccaagctcccc 2411175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12662765 - 12662651
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||  ||||||||||||  | |||||||  ||||| |||||| ||| |||||||||||||||| || ||||||||||| |||| ||||||||||||    
T  12662765 ttgaacattttataagtaagaaaacccataaatccattgtcttaagtttttgggtaagagtgtggtgcctttcttgcttgtggggttcttctagcctcga 12662666  T
Q  101 tgtggacggttcccc 115  Q
    ||||| |||| ||||    
T  12662665 tgtggtcggtccccc 12662651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 301030 - 301132
Alignment:
Q  35 cattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcccc-agtgaccca 133  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||||| ||||| || ||||| ||| ||||| | || |||||||| | |||||||    
T  301030 cattgccttaagatttttggtaagagtgtggtgtctctcttgcttgtgtggctgttcaagtctcgacgtgaacggtcctccgaactcccctaatgaccca 301129  T
Q  134 aca 136  Q
    |||    
T  301130 aca 301132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 35167951 - 35167830
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||| || || |||||||   |||||||| | ||||  |||||||||||| ||||||||   || |||||||||||||||| ||||    
T  35167951 ttgaacaccttataagtaggatgacccataaatctattgccttgatgtttttggtaagagtgtgatgtctctcacactagtgtggttgttctagcatcga 35167852  T
Q  101 tgtggacggttccccaaactcc 122  Q
    ||||||| || |||| ||||||    
T  35167851 tgtggactgtccccctaactcc 35167830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 24489583 - 24489666
Alignment:
Q  58 gagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaact--ccccagtgacccaacaaag 139  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| || |||||| ||| ||||  |||||||||||||||||||    
T  24489583 gagtgtggtgtctctcttgcttgtgcagttgttctaacctcgatatgaacggtttcccgaactccccccagtgacccaacaaag 24489666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 36527196 - 36527117
Alignment:
Q  13 taagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttct 92  Q
    ||||| ||||||||||||||| |||||||||||| ||| || |||||||||| |||||||||  ||||||||| ||||||    
T  36527196 taagtgagaggatccataaacgcattgccttaagattttggataagagtgtgctgtctctctcacttgtgtggctgttct 36527117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5723904 - 5723811
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctag 94  Q
    |||||||| ||||| ||||||| | |||| || | |||| |||||||||| ||| |||||| | |||||||||||||||||| |||||||||||    
T  5723904 ttgaacacattatatgtaagagaacccattaatttattgtcttaaggttttgggaaagagtatagtgtctctcttgcttgtgcggttgttctag 5723811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38427593 - 38427697
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||| ||||| |||| ||  ||||| |||||||||| | |||||||||||  ||||||||  |||||| |||||||||| ||||||    
T  38427593 ttgaacatcttataagta-gaggacccattaatccattgtcttaaggttttgtgtaagagtgtgacgtctctctcacttgtgcggttgttctaacctcga 38427691  T
Q  101 tgtgga 106  Q
    ||||||    
T  38427692 tgtgga 38427697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 795306 - 795254
Alignment:
Q  40 ccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttct 92  Q
    |||||||||||  |||||||||||||||||||||||||||||| |||||||||    
T  795306 ccttaaggttttaggtaagagtgtggtgtctctcttgcttgtgcggttgttct 795254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 38427306 - 38427366
Alignment:
Q  43 taaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    |||| ||| |||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  38427306 taagattttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctaacctcgatgt 38427366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36522350 - 36522277
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||  |||||||| |||||| | |||||| ||||  |||||||||| |||||||||||||||||||||||    
T  36522350 ttgaacattttataagtgagaggaccaataaacccattatcttaaggttttgggtaagagtgtggtgtctctct 36522277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 13042609 - 13042657
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||||    
T  13042609 ccataaacccattgccttaaggttttggataagagtgtggtgtctctct 13042657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 13785732 - 13785636
Alignment:
Q  14 aagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    |||||| |||||| |||||| |||  |||||||||||   |||| |||||||||| ||||| | |||| ||||||||||| | ||||||||||||||    
T  13785732 aagtaataggatctataaacccataaccttaaggttttaagtaaaagtgtggtgtttctctcgtttgtatggttgttctaacttcgatgtggacggt 13785636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26074895 - 26074807
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaa-gagtgtggtgtctctcttgcttgtgtggttg 88  Q
    ||||||||  |||||||| ||||| ||||||||  |||| |||||||||| |||||| |||||||| |||||||||||  |||||||||    
T  26074895 ttgaacacaatataagtaggaggacccataaacctattgtcttaaggttttgggtaaagagtgtggcgtctctcttgcaagtgtggttg 26074807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41635304 - 41635212
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttcta 93  Q
    ||||||||||||||| ||||||||||||||||  ||||| |||||  |||  ||||||||||| || ||||| || ||||| |||||| ||||    
T  41635304 ttgaacaccttataaataagaggatccataaatccattgtcttaaaattttaggtaagagtgtagtatctcttttacttgtatggttgctcta 41635212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 42435486 - 42435581
Alignment:
Q  14 aagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    |||||||||||||||||| || ||| ||||||||||| |  | |||||||| |||||||||     |||||||||||||||| ||||||||||||||    
T  42435486 aagtaagaggatccataatct-attaccttaaggttttgaatcagagtgtgatgtctctctcataagtgtggttgttctagcatcgatgtggacggt 42435581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 9498410 - 9498343
Alignment:
Q  27 cataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctag 94  Q
    ||||||| ||||||||||||  || | |||||||||||| |||||||||||  |||||||||||||||    
T  9498410 cataaacccattgccttaagcatttgagtaagagtgtggcgtctctcttgcaagtgtggttgttctag 9498343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 31509776 - 31509857
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaagg-tttcgggtaagagtgtggtgtctctcttgcttgt 81  Q
    |||| ||| |||||||| ||||||  ||||||||||||||||| ||| |||  ||||||| |||||||||||||| ||||||    
T  31509776 ttgagcactttataagtgagaggactcataaactcattgccttgaggttttttggtaagaatgtggtgtctctctcgcttgt 31509857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 13042784 - 13042822
Alignment:
Q  36 attgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  13042784 attgccttaaggttttgggtaagaatgtggtgtctctct 13042822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 13112782 - 13112820
Alignment:
Q  36 attgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  13112782 attgccttaaggttttgggtaagaatgtggtgtctctct 13112820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 795189 - 795152
Alignment:
Q  54 gtaagagtgtggtgtctctcttgc-ttgtgtggttgtt 90  Q
    |||||||||||||||||||||||| |||||||||||||    
T  795189 gtaagagtgtggtgtctctcttgctttgtgtggttgtt 795152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 34103625 - 34103666
Alignment:
Q  27 cataaactcattgccttaaggtttcgggtaagagtgtggtgt 68  Q
    |||||||||||||||||||||||| |  ||||||||||||||    
T  34103625 cataaactcattgccttaaggttttgaataagagtgtggtgt 34103666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 36521991 - 36521922
Alignment:
Q  19 agaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttg 88  Q
    |||||| ||||||||  ||||||||||||||| |||||||||||||   |||||||   |||||||||||    
T  36521991 agaggacccataaaccaattgccttaaggttttgggtaagagtgtgtcatctctctcatttgtgtggttg 36521922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 13112607 - 13112651
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtct 70  Q
    |||||||| ||||| |||||||||| || ||||||||||||||||    
T  13112607 ccataaacccattgtcttaaggttttggataagagtgtggtgtct 13112651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26074363 - 26074395
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  26074363 ttgaacaccttataagtaagaggacccataaac 26074395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 32445943 - 32446003
Alignment:
Q  14 aagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||| |||||| |||||||| ||  |||||||||||| |||| | ||||||||||||||||    
T  32445943 aagtgagaggacccataaacccaacgccttaaggttttgggttaaagtgtggtgtctctct 32446003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 36389064 - 36389016
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    ||||||||||| ||||||| ||||| |||| |||||||||||| |||||    
T  36389064 ccataaactcagtgccttagggttttgggtcagagtgtggtgtttctct 36389016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 9e-45; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 36178718 - 36178611
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36178718 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcta 36178619  T
Q  101 tgtggacg 108  Q
    ||||||||    
T  36178618 tgtggacg 36178611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 6421430 - 6421566
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  6421430 ttgaacaccttataagtaagaggactcataaactcattgccttgaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagtctcga 6421529  T
Q  101 tgtggacggttccccaaactcccc-agtgacccaaca 136  Q
    |||||||||| |||| | ||||||  |||||||||||    
T  6421530 tgtggacggtcccccgagctcccctcgtgacccaaca 6421566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 37105969 - 37106105
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  37105969 ttgaacaccttataagtaaggggacccataaactcattgccttaagattttgggtaagagtgtggtgtctctcttgcttgtacggttgttctagcctcga 37106068  T
Q  101 tgtggacggttccccaaactcccc-agtgacccaaca 136  Q
    |||||||||| |||| | ||||||  |||||||||||    
T  37106069 tgtggacggtcccccgagctccccttgtgacccaaca 37106105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41283588 - 41283473
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||| ||    
T  41283588 ttgaacaccttataagtaagaggacccataaactcattgccttaaggttttaggtaagagtgtggcgtctctcttgtttgtgtggttgttctagccttga 41283489  T
Q  101 tgtggacggttcccca 116  Q
    |||||||||| |||||    
T  41283488 tgtggacggtccccca 41283473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 36005993 - 36005887
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| |||||||||||||||||    
T  36005993 ttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaaaagtgtggcgtctctcttgcttgtggggttgttctagcctcga 36005894  T
Q  101 tgtggac 107  Q
    |||||||    
T  36005893 tgtggac 36005887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 962643 - 962766
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||| |||||| |||||||| ||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  962643 ttgaacaccttataagtgagaggacccataaacccattgtcttaaggttttgggtaagagtgtgttgtcactcttgcttgtgtggttgttctagcctcga 962742  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    ||||||||||  ||| ||||||||    
T  962743 tgtggacggtctcccgaactcccc 962766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 14745780 - 14745657
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||||||    
T  14745780 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttgcaagtgtggttgttctagcctcga 14745681  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    ||||||| || |||| | ||||||    
T  14745680 tgtggacagtcccccgagctcccc 14745657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15880308 - 15880415
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| |||||||||    
T  15880308 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttttagcctcga 15880407  T
Q  101 tgtggacg 108  Q
    ||||||||    
T  15880408 tgtggacg 15880415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5543111 - 5543002
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  5543111 ttgaacaccttataagtaagaggatccataaacctattgccttaagattttgggtaagagtgtggtgtctctattgcttgtgcggttgttcaagcctcga 5543012  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  5543011 tgtggacggt 5543002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37106233 - 37106342
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||    
T  37106233 ttgaacaccttataagtaagaggacccataaacccatttccttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcgattgttctagcctcga 37106332  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  37106333 tgtggacggt 37106342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 42514694 - 42514830
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||| ||| |||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  42514694 ttgaacaccttataagtaagaggacccataaacccatcgccttaagattttgggtaagagtgtggcgtctctcttacttgtggggttgttctagcctcga 42514793  T
Q  101 tgtggacggttccccaaactcccc-agtgacccaaca 136  Q
    |||||||||| |||| | ||||||  |||||||||||    
T  42514794 tgtggacggtcccccgagctcccctcgtgacccaaca 42514830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 5542738 - 5542615
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||  |||||||||||||||||||||||||||||| |||||||| || |||||    
T  5542738 ttgaacaccttataagtaagaggacccataaacctattgccttaaggtttttggtaagagtgtggtgtctctcttgcttgtgcggttgttcaagtctcga 5542639  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| |||| | ||||||    
T  5542638 tgtggacggtcccccgagctcccc 5542615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15511608 - 15511501
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||||||||||||||| |||||||| ||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15511608 ttgaacacgttataagtaagaggacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagtctcga 15511509  T
Q  101 tgtggacg 108  Q
    ||||||||    
T  15511508 tgtggacg 15511501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6422155 - 6422261
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||| |||||||| |||||||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6422155 ttgaacacattataattaagaggacccataaacccatagccttaaggttttaggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 6422254  T
Q  101 tgtggac 107  Q
    |||||||    
T  6422255 tgtggac 6422261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 3673122 - 3673250
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacgg 109  Q
    ||||||||||||||||||||||||||||||| ||||| ||| || |||||||||| |||||||||| || ||||||||||||||||||||||||||||||    
T  3673122 ttataagtaagaggatccataaactcattgctttaagattttggctaagagtgtgatgtctctcttactagtgtggttgttctagcctcgatgtggacgg 3673221  T
Q  110 ttccccaaact-ccccagtgacccaacaa 137  Q
    | ||||   || |||||||||||||||||    
T  3673222 tccccctggctcccccagtgacccaacaa 3673250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 35580836 - 35580714
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||||| ||||||||||| || |||||||||| ||||| |||||||||||||||||    
T  35580836 ttgaacaccttataagtgagagga-ccataaacccattgccttaaggttttgggtaagagtgcggcgtctctcttgtttgtggggttgttctagcctcga 35580738  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| ||||  |||||||    
T  35580737 tgtggacggtccccctgactcccc 35580714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33731693 - 33731795
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||    
T  33731693 ttgagcaccttataagtaagaggatccataaacctattgccttaaggttttgggtaagagtatggtgtctctcttgcttatgcggttgttctagcctcga 33731792  T
Q  101 tgt 103  Q
    |||    
T  33731793 tgt 33731795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36178284 - 36178170
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||| | | |||||||| |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  36178284 ttgaacaccttataagtaagggaacccataaacccattgccttaagattttgggtaagagtgtggtgcctctcttgcttgtgtggttgttatagcctcga 36178185  T
Q  101 tgtggacggttcccc 115  Q
    ||| |||||| ||||    
T  36178184 tgtagacggtccccc 36178170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40679742 - 40679633
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||| | |||||||| ||| |||||||| ||| |||||||||||||| ||||||||| |||||| ||||||||||| |||||    
T  40679742 ttgaacaccttataagtaagagaacccataaacccatcgccttaagattttgggtaagagtgtggcgtctctcttacttgtggggttgttctagtctcga 40679643  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  40679642 tgtggacggt 40679633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 6713021 - 6713141
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttc-gggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    |||||||||||||||||||||||| ||||||||  ||||| |||||||||  ||||||||||||| |||||||||||||| || | ||||||||||||||    
T  6713021 ttgaacaccttataagtaagaggacccataaacctattgctttaaggtttttgggtaagagtgtgatgtctctcttgcttatgggattgttctagcctcg 6713120  T
Q  100 atgtggacggttccccaaact 120  Q
    ||||||||||| |||| ||||    
T  6713121 atgtggacggtcccccgaact 6713141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28254350 - 28254258
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagc 95  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  |||||| ||||||||||||    
T  28254350 ttgaacatcttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctct--cttgtggggttgttctagc 28254258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 6421793 - 6421899
Alignment:
Q  18 aagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaa 117  Q
    ||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||| |||| |    
T  6421793 aagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctctaacttgtgtggttgttctggcctcgatgtggacggtcccccga 6421892  T
Q  118 actcccc 124  Q
     ||||||    
T  6421893 gctcccc 6421899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 3672756 - 3672860
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacgg 109  Q
    |||||||||| || ||| |||||| |||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  3672756 ttataagtaaaag-atctataaacccattgccttaagattttgggtaagagtgtggtgtctctcttaattgtgtggttgttctagtctcgatgtggacgg 3672854  T
Q  110 ttcccc 115  Q
    ||||||    
T  3672855 ttcccc 3672860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 29676580 - 29676709
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||||| |||| | ||||||||||||||||||      | ||||||||||||||||||||||||||||||| |||| ||| | ||||||    
T  29676580 ttgaacacattataagtgagagaacccataaactcattgcctt------ttgggtaagagtgtggtgtctctcttgcttgtggggttattcaaacctcga 29676673  T
Q  101 tgtggacggttccccaaactccccagtgacccaaca 136  Q
    |||||||||| |||  ||||||||||||||||||||    
T  29676674 tgtggacggtccccggaactccccagtgacccaaca 29676709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38796733 - 38796622
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagag--tgtggtgtctctcttgcttgtgtggttgttctagcctc 98  Q
    |||||||||||||||||||||||| ||||||||  | ||||||||||||| |||||||||  ||||| |||||| |||||||||||||||||| ||||||    
T  38796733 ttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaagagtatgtggcgtctctattgcttgtgtggttgttcaagcctc 38796634  T
Q  99 gatgtggacggt 110  Q
    ||||| ||||||    
T  38796633 gatgtcgacggt 38796622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 5367500 - 5367599
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| ||||||| ||| |||  ||||||||||| |||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  5367500 ttgaacaccttataagtaagatgatccatgaacacataaccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcagttgttctagcctcga 5367599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 7598276 - 7598382
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    |||||||||||| |||||||| |||||||||||| |||||||||||| |||||||| | ||||||||||||  |||||| |||||||| |||||||||||    
T  7598276 aacaccttataaataagaggacccataaactcatagccttaaggttttgggtaagaatatggtgtctctctcacttgtgcggttgttcaagcctcgatgt 7598375  T
Q  104 ggacggt 110  Q
    | |||||    
T  7598376 gaacggt 7598382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 23346285 - 23346390
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    |||||||||||| |||||||  |||||||| ||| ||||||||||||  |||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  23346285 aacaccttataa-taagagggcccataaacccatagccttaaggttttcggtaagagtgtgatgtctctcttgcttgtgcggttgttctagcctagatgt 23346383  T
Q  104 ggacggt 110  Q
    |||||||    
T  23346384 ggacggt 23346390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 14745407 - 14745283
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgt-gtggttgttctagcctcg 99  Q
    ||||||| ||| |||||| ||||| |||||||| |||||||||||||||| |||||||||||||| ||||||||||   || ||||||||||||||||||    
T  14745407 ttgaacatcttgtaagtatgaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttgtaagtggtggttgttctagcctcg 14745308  T
Q  100 atgtggacggttccccaaactcccc 124  Q
    ||||||||  | || ||||||||||    
T  14745307 atgtggacaatccctcaaactcccc 14745283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 1769937 - 1770040
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  ||||||||||| || || | | || |  |||||||||||||||||||||||||||| |||||||||||||||||    
T  1769937 ttgaacaccttataagtaagaggactcataaactcatagctttgaagctttgaataagagtgtggtgtctctcttgcttgtgaggttgttctagcctcga 1770036  T
Q  101 tgtg 104  Q
    ||||    
T  1770037 tgtg 1770040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 40733562 - 40733676
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||  |   |||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||    
T  40733562 ttgaacaccttataagtaagaggacccataaacctacaaccttaaagttttgggtaagagtgtggtgtctctctcgcttgtgtggtagttcaagtctcga 40733661  T
Q  101 tgtggacggttcccc 115  Q
    |||||| ||| ||||    
T  40733662 tgtggatggtccccc 40733676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 28531427 - 28531322
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||||| ||||||   || ||  |||| |||||||||||    
T  28531427 ttgaacaccttataagtaagaggtcccataaactcattgccttaagattttgggtaagagtgtggtgactctctcagttatgcagttgctctagcctcga 28531328  T
Q  101 tgtgga 106  Q
    ||||||    
T  28531327 tgtgga 28531322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 37632701 - 37632602
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacgg 109  Q
    ||||||||||||||| |||||||| |||  | ||||||||| ||||||||||||||||| |||||| |  ||||| ||||||||||||||||||||||||    
T  37632701 ttataagtaagaggacccataaacccataactttaaggttttgggtaagagtgtggtgtatctcttacaagtgtgattgttctagcctcgatgtggacgg 37632602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40163486 - 40163383
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgcctt-aaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    ||||||||||||||||||||| || |||| |||  | || ||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  40163486 ttgaacaccttataagtaagatgacccattaacctagtgtctttaaggttttgggtaaaagtgtggtgtctctcttgcttgtgtggttgttctaacctcg 40163387  T
Q  100 atgt 103  Q
    ||||    
T  40163386 atgt 40163383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 6421688 - 6421786
Alignment:
Q  18 aagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccca 116  Q
    ||||||| ||||||||  |||| || ||||||| |||||||||||||||||||||||  |||||||||||||||  ||||||||||||||||| |||||    
T  6421688 aagaggacccataaacctattgactaaaggttttgggtaagagtgtggtgtctctctaacttgtgtggttgttccggcctcgatgtggacggtacccca 6421786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 40733931 - 40734041
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||||||||||||||||||   ||||| || |  ||||||| |||| ||||||||||||||||||| ||| |||||||||||||||| || ||||||||    
T  40733931 aacaccttataagtaagagggctcataacct-acagccttaaagttttgggtaagagtgtggtgtctgtctcgcttgtgtggttgttcaagtctcgatgt 40734029  T
Q  104 ggacggttcccc 115  Q
    ||||||| ||||    
T  40734030 ggacggtccccc 40734041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 30313230 - 30313318
Alignment:
Q  9 cttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcct 97  Q
    ||||||||| |||||| ||| ||||||||||||||||| ||| |||||||||||||| ||||||||  |||||||||||| ||| ||||    
T  30313230 cttataagtgagaggacccaaaaactcattgccttaagattttgggtaagagtgtggcgtctctctcacttgtgtggttgctctggcct 30313318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 36784365 - 36784273
Alignment:
Q  9 cttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgat 101  Q
    ||||||||||||| || |||||||| | ||| |||||||||| || ||| ||||| ||||||||||||||||||||||| ||| |||||||||    
T  36784365 cttataagtaagatgacccataaaccctttgtcttaaggttttggataaaagtgttgtgtctctcttgcttgtgtggttattcaagcctcgat 36784273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7598654 - 7598754
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||        |||||| ||||  ||||||||||||||||||||||  ||||||||||||||| ||| ||||    
T  7598654 ttgaacaccttataagtaagaggacccataa--------ccttaacgtttttggtaagagtgtggtgtctctctcacttgtgtggttgttcaagcatcga 7598745  T
Q  101 tgtggacgg 109  Q
    |||||||||    
T  7598746 tgtggacgg 7598754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 12529141 - 12529038
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||| ||||  | |||||  || |||||||||||| ||||| |||||||||| |||| |    
T  12529141 ttgaacaccgtataagtaagaggactcataaactcattgccttaaagttttagataagaacgtagtgtctctcttgtttgtgcggttgttctaacctcaa 12529042  T
Q  101 tgtg 104  Q
    ||||    
T  12529041 tgtg 12529038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 35580534 - 35580438
Alignment:
Q  20 gaggatccataaactcattgccttaaggtttcgggta--agagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccc 115  Q
    ||||| ||||||||||||||||||||||||| |||||  ||||||||| ||||||| | | | |||| ||||| ||||||||||||||||||||||||    
T  35580534 gaggacccataaactcattgccttaaggttttgggtaagagagtgtggcgtctctc-tccctatgtgattgttttagcctcgatgtggacggttcccc 35580438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 16590941 - 16591034
Alignment:
Q  14 aagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggac 107  Q
    ||||||||||| |||||||| ||||||||||||||||   |||||| | |  |||||||||| |||||| ||||||||||||||| ||||||||    
T  16590941 aagtaagaggacccataaacacattgccttaaggttttaagtaagaatctaatgtctctcttacttgtggggttgttctagcctcaatgtggac 16591034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30323509 - 30323581
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctc 73  Q
    |||||||| ||| |||| |||||| | ||||||||||||||||||||||| |||||||||||||| |||||||    
T  30323509 ttgaacactttagaagtgagaggacctataaactcattgccttaaggttttgggtaagagtgtggcgtctctc 30323581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 33561561 - 33561491
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    ||||| |||||||| |||||| |||||||||||||| |||||||||| ||||||||||||| | |||||||    
T  33561561 aacactttataagtgagaggacccataaactcattgtcttaaggttttgggtaagagtgtgatatctctct 33561491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 29676978 - 29677058
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgga 106  Q
    |||||||| ||||||||||||| ||   ||||||||||||||||||||||  ||||| |||||||| | ||||||||||||    
T  29676978 ccataaacccattgccttaaggctttaagtaagagtgtggtgtctctcttaattgtggggttgttccaacctcgatgtgga 29677058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 3594289 - 3594182
Alignment:
Q  3 gaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatg 102  Q
    |||||| |||||||| | ||||||||||||| |||||| ||||| ||| | ||||||||||| | |||||| | || ||||| || ||||| ||||||||    
T  3594289 gaacactttataagtgataggatccataaacacattgctttaagattttgagtaagagtgtgatatctctcatactagtgtgtttattctaacctcgatg 3594190  T
Q  103 tggacggt 110  Q
    || |||||    
T  3594189 tgaacggt 3594182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 29873650 - 29873563
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttg 88  Q
    |||||||  ||||||||  |||||  |||||||||||||||||||||||| | |||||||||||  ||||||||  ||||||||||||    
T  29873650 ttgaacattttataagtgggaggactcataaactcattgccttaaggttttgagtaagagtgtgacgtctctctcacttgtgtggttg 29873563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 31468847 - 31468800
Alignment:
Q  17 taagaggatccataaactcattgccttaaggtttcgggtaagagtgtg 64  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||    
T  31468847 taagaggacccataaactcattgccttaaggttttgggtaagagtgtg 31468800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31899539 - 31899496
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgcctta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  31899539 ttgaacaccttataagtaagaggacccataaactcattgcctta 31899496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 31385782 - 31385868
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggtt 87  Q
    |||| |||||||||||| | |||| |||||||| |||||||||||||||| ||| |  |||||||||||||| |  |||||||||||    
T  31385782 ttgagcaccttataagtgaaaggacccataaacccattgccttaaggttttgggaataagtgtggtgtctctttcacttgtgtggtt 31385868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 31899170 - 31899093
Alignment:
Q  46 ggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcccc 124  Q
    ||||| ||||||||||| ||| ||||||||||||||| |||| ||||| |||||||||| |||| ||||||| ||||||    
T  31899170 ggttttgggtaagagtgaggtatctctcttgcttgtggggttcttctaacctcgatgtgaacgg-tccccaagctcccc 31899093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 31259726 - 31259658
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctct 72  Q
    |||||||||||||||||| || ||||||||  ||  ||||||||||| ||||||||||||||| |||||    
T  31259726 aacaccttataagtaagatgacccataaacctatcaccttaaggttttgggtaagagtgtggtatctct 31259658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 36178380 - 36178320
Alignment:
Q  3 gaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgt 63  Q
    |||||||||||||||||| |||  ||||||| ||||| |||||||||| ||||||||||||    
T  36178380 gaacaccttataagtaaggggactcataaacccattgtcttaaggttttgggtaagagtgt 36178320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37895174 - 37895107
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgt 68  Q
    ||||| |||||| |||||| || |  ||||||| |||||||||||||||| |||||||||||||||||    
T  37895174 ttgaaaaccttaaaagtaaaagaacacataaacccattgccttaaggttttgggtaagagtgtggtgt 37895107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16542494 - 16542556
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgt 63  Q
    ||||||||||||||| ||||||||   ||||||||||||||||||| ||| | ||||||||||    
T  16542494 ttgaacaccttataaataagaggacttataaactcattgccttaagattttgagtaagagtgt 16542556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 29874136 - 29874022
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| |||||| |  ||||| |||||||| |||||||||||||||| || ||||||||||| |||| ||   |||||| ||||| | | |||| ||    
T  29874136 ttgaacactttataattgggaggacccataaacccattgccttaaggttttggataagagtgtggcgtctatcccacttgtgcggttgctttggcctgga 29874037  T
Q  101 tgtggacggttcccc 115  Q
    ||||| |||| ||||    
T  29874036 tgtgggcggtccccc 29874022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28254225 - 28254165
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagt 61  Q
    |||||||| |||||||||||||||  ||||||| | ||||||||| |||| ||||||||||    
T  28254225 ttgaacactttataagtaagaggactcataaacactttgccttaaagtttagggtaagagt 28254165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 9231294 - 9231401
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||  |||||| ||||||||||||| ||| ||  ||||||| |||| || ||||||||| || |||||||  ||| || |||| ||||| ||| ||    
T  9231294 ttgaacatattataaataagaggatccatcaacccaccgccttaaagttttggttaagagtgtagtatctctctaacttatgcggttattctaaccttga 9231393  T
Q  101 tgtggacg 108  Q
    ||||||||    
T  9231394 tgtggacg 9231401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 6944878 - 6944837
Alignment:
Q  145 tgcgcaatggttaccctctcgaatgacatgttggaaagaaat 186  Q
    |||||||||||| ||||||||||  |||||||||||||||||    
T  6944878 tgcgcaatggttgccctctcgaagcacatgttggaaagaaat 6944837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30312834 - 30312907
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| |||||| | ||| || ||||||||| ||| ||||||||||| |||||| ||||||  ||||||||    
T  30312834 ttgaacactttataacttagatgacccataaacttatttccttaaggttttgggtaaaagtgtgtagtctctct 30312907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 8904494 - 8904546
Alignment:
Q  22 ggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    ||||||||||||  |||||| || ||||| |||||| ||||||||||||||||    
T  8904494 ggatccataaaccaattgccatatggttttgggtaaaagtgtggtgtctctct 8904546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 28226407 - 28226455
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| ||||| |||| |||||  ||||||||||||||||||||||    
T  28226407 ccataaacacattgtcttagggttttaggtaagagtgtggtgtctctct 28226455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 627 - 491
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  627 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctttcttgcttgagtggtttttctagcctcga 528  T
Q  101 tgtggacggttccccaaac-tccccagtgacccaaca 136  Q
    |||||| ||| |||| | | |||||||||||||||||    
T  527 tgtggaaggtcccccgagcttccccagtgacccaaca 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 255 - 146
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||   ||| |||||| || ||||| |||||||||||||||||||| |||||||||||||||||||    
T  255 ttgaacaccttataagtaagagga-ccataaac-cata--ctttaggtttagg-taagaatgtggtgtctctcttgcttgagtggttgttctagcctcga 161  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  160 tgtggacggtccccc 146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 1219 - 1083
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||| || ||||  ||||||| |||||||||||||||| |||||||||| |||||||||||||| || ||||||||||||||||||||    
T  1219 ttgaacaccttataagaaaaaggactcataaacccattgccttaaggttttgggtaagagtatggtgtctctcttgtttatgtggttgttctagcctcga 1120  T
Q  101 tgtggacggttccccaaact-ccccagtgacccaaca 136  Q
    ||||||||||||||||| || ||||||||||||||||    
T  1119 tgtggacggttccccaagctcccccagtgacccaaca 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 1802 - 1731
Alignment:
Q  3 gaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  1802 gaacaccttataagtgagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctct 1731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 9e-42; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 1085729 - 1085615
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  1085729 ttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttacttgtgtggttgttctagcctcga 1085630  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  1085629 tgtggacggtccccc 1085615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 37533477 - 37533363
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  37533477 ttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgcggttgttctagcctcga 37533378  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  37533377 tgtggacggtccccc 37533363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 22567152 - 22567029
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||  |||||||    
T  22567152 ttgaacaccttataagtaagaggacccataaactcattgccttaaggtttttggtaagagtgtggtgtctctcttgcttgtggggttgttcgggcctcga 22567053  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||| ||| |||| | ||||||    
T  22567052 tgtggatggtcccccgagctcccc 22567029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 23490 - 23376
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  23490 ttgaacaccttataagtaagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctcttgcatgtgcggttgttctagcctcga 23391  T
Q  101 tgtggacggttcccc 115  Q
    | |||||||| ||||    
T  23390 tttggacggtccccc 23376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 6054605 - 6054719
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||| | ||||| ||||||||||||||| ||    
T  6054605 ttgaacaccttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctcctacttgtatggttgttctagccttga 6054704  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  6054705 tgtggacggtccccc 6054719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 37533123 - 37533010
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||| ||||||    
T  37533123 ttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaa-agtgtggtgtctctcttgcttgtgcgcttgttctaacctcga 37533025  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  37533024 tgtggacggtccccc 37533010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 7517625 - 7517729
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  7517625 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctgtctcacttgtgtggttgttctagcctcga 7517724  T
Q  101 tgtgg 105  Q
    |||||    
T  7517725 tgtgg 7517729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 11845236 - 11845372
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||| || ||||||||||||||||||||||||||||  ||||||||||||||||    
T  11845236 ttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggataagagtgtggtgtctctcttgcttgtgcagttgttctagcctcga 11845335  T
Q  101 tgtggacggttccccaaact-ccccagtgacccaaca 136  Q
    ||| |||||| ||||   || ||||||||||||||||    
T  11845336 tgtagacggtcccccgtgctcccccagtgacccaaca 11845372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 19122776 - 19122879
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||||||  ||||||  |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  19122776 ttgaacaccttataagtaagaggactcataaatccattgccttaaggttttgggtaagagtgtggtgtctatcttgcttgtgtggttgttctagtctcga 19122875  T
Q  101 tgtg 104  Q
    ||||    
T  19122876 tgtg 19122879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 30244315 - 30244438
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| ||||||||||||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  30244315 ttgaagaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcacttgtgtggttgttcaagcctcga 30244414  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||| ||| |||| | ||||||    
T  30244415 tgtggatggtcccccgagctcccc 30244438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 30245122 - 30245254
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||    ||||||||||||||| ||||||||    
T  30245122 ttgaacaccttataagtaagacgacccataaactcattgccttaaggttttgggtaagagtgtggtgtctct----cttgtgtggttgttcaagcctcga 30245217  T
Q  101 tgtggacggttccccaaactcccc-agtgacccaaca 136  Q
    |||||| ||| |||| | ||||||  |||||||||||    
T  30245218 tgtggatggtcccccgagctcccctcgtgacccaaca 30245254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 36939846 - 36939731
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||| |||||| |||||||||| |||||||||| || |||||||||||||||||    
T  36939846 ttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaaaagtgtggtgtttctcttgcttatgcggttgttctagcctcga 36939747  T
Q  101 tgtggacggttcccca 116  Q
    |||||| || ||||||    
T  36939746 tgtggatgggtcccca 36939731  T

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Target: chr7; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 40094884 - 40094773
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgt 103  Q
    ||||||||||||||||||||| |||||||| ||| | |||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  40094884 aacaccttataagtaagaggacccataaacccatcgtcttaaggttttgggtaagagtgtggcgtctctcttgcttgtgaggttgttctagcctcgatgt 40094785  T
Q  104 ggacggttcccc 115  Q
    || |||| ||||    
T  40094784 ggtcggtccccc 40094773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 45433286 - 45433400
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||| |  |||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45433286 ttgaacaccttataagtaagagaactcataaacctattgccttaagattttgggtaagagtgtggtgtctctcttgcttgtggggttgttctagcctcga 45433385  T
Q  101 tgtggacggttcccc 115  Q
    ||||| |||| ||||    
T  45433386 tgtggtcggtccccc 45433400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 45754760 - 45754862
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| ||  ||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45754760 ttgaacaccttataagtaagatgactcataaacccatagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcga 45754859  T
Q  101 tgt 103  Q
    |||    
T  45754860 tgt 45754862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34218147 - 34218038
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||| ||||||  ||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  34218147 ttgaacaccttataagtgagaggactcataaacccattgtcttaaggttttgggtaagagtgtggtgtctctctcgcttgtatggttgttcaagcctcga 34218048  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  34218047 tgtggacggt 34218038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 118414 - 118276
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtc--tctcttgcttgtgtggttgttctagcctc 98  Q
    |||||||||| |||||||||||||||||||||| |||| || |||||||| |||||||||||||| |||  |||||||||||||||||||||||||| |     
T  118414 ttgaacacctaataagtaagaggatccataaacccattaccgtaaggttttgggtaagagtgtggcgtctatctcttgcttgtgtggttgttctagcttt 118315  T
Q  99 gatgtggacggttccccaaact-ccccagtgacccaacaa 137  Q
    ||||||||||| ||||||  || |||||||||||||||||    
T  118314 gatgtggacgg-tccccaggctcccccagtgacccaacaa 118276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 30032612 - 30032735
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||| ||||||||||  || |||||||||||| |||||||||||||   ||||||||||||||| |||||||||| ||||||    
T  30032612 ttgaacaccttataagtaagagtatccataaacctatagccttaaggttttgggtaagagtgtgacatctctcttgcttgtgcggttgttctatcctcga 30032711  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||||||| |||| | ||||||    
T  30032712 tgtggacggtcccccgagctcccc 30032735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 37167840 - 37167935
Alignment:
Q  15 agtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    ||||||||||||||||||  ||||| ||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37167840 agtaagaggatccataaatccattgacttaaagttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 37167935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 45434681 - 45434784
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||| |||||||||| ||||||  ||||||||||||||||    
T  45434681 ttgaacaccttataagtaagaggacccataaacttactgccttaaggttttgggtaagagtgtgatgtctctcttacttgtggagttgttctagcctcga 45434780  T
Q  101 tgtg 104  Q
    ||||    
T  45434781 tgtg 45434784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9901689 - 9901794
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||     
T  9901689 ttgaacatcttatacgta-gaggatccataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttgctagtgcggttgttctagcctcgg 9901787  T
Q  101 tgtggac 107  Q
    |||||||    
T  9901788 tgtggac 9901794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 30253537 - 30253656
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||    ||||||||||||||| ||||||||    
T  30253537 ttgaagaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctct----cttgtgtggttgttcaagcctcga 30253632  T
Q  101 tgtggacggttccccaaactcccc 124  Q
    |||||| ||| |||| | ||||||    
T  30253633 tgtggatggtcccccgagctcccc 30253656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29157610 - 29157719
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| || |||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||||| || ||    
T  29157610 ttgaacaccttataagtaagacgacccataaatccattgccttaaggttttgggtaagagtgtggtgtctctcttgctcgtgtagttgctctagtcttga 29157709  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  29157710 tgtggacggt 29157719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 7554070 - 7554154
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtgg 85  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  7554070 ttgaacaccttataagtaagaggatccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctcgcttgtgtgg 7554154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 24177481 - 24177595
Alignment:
Q  2 tgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgat 101  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||| ||||  ||||||||||||| |||||||||||||||| ||||||  |||||||||     
T  24177481 tgaacaccttataagtaagcggacccataaacccattgccttaaagtttttggtaagagtgtggcgtctctcttgcttgtgcggttgtcttagcctcgac 24177580  T
Q  102 gtggacggttcccca 116  Q
    ||||||||| |||||    
T  24177581 gtggacggtccccca 24177595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 28300366 - 28300257
Alignment:
Q  2 tgaacaccttataagtaagaggatcc-ataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||||||||||||| | || |||||| |||||||||||| ||| |||||||||||||| |||||||||||  ||||||||||||  |||||||    
T  28300366 tgaacaccttataagtaagagaaccccataaacccattgccttaagattttgggtaagagtgtggcgtctctcttgcaagtgtggttgttcgggcctcga 28300267  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  28300266 tgtggacggt 28300257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 40230404 - 40230283
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||| |||||||||||||||| |||||||| ||| | |||||||||| |||||| ||| |||||||||||||||  |||| ||| ||||| |||| |    
T  40230404 ttgaacatcttataagtaagaggacccataaacccatagtcttaaggttttgggtaaaagtctggtgtctctcttgcaagtgtagttattctaacctcta 40230305  T
Q  101 tgtggacggttccccaaactcc 122  Q
    ||||||||||||||| ||||||    
T  40230304 tgtggacggttcccctaactcc 40230283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 47129450 - 47129523
Alignment:
Q  37 ttgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  47129450 ttgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgatctagcctcgatgtggacggt 47129523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 41854679 - 41854815
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||| |||| || | |||||   | ||||||||||||| |||||||||||||  |||| |||| |||||| ||||||||||||||| |    
T  41854679 ttgaacaccttataagcaagatgacctataaatataatgccttaaggttttgggtaagagtgtgacgtctttcttacttgtgcggttgttctagcctcaa 41854778  T
Q  101 tgtggacggttccccaaactccccagtgacccaacaa 137  Q
    ||| |||||| ||||  ||||||||||||||||||||    
T  41854779 tgtagacggtccccctgactccccagtgacccaacaa 41854815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8128554 - 8128451
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||| ||||||||| |||||||| |||  ||||||||||| || ||||||||||||||| |||| |||| ||||||||||||||| ||||    
T  8128554 ttgaacaccttatatgtaagaggacccataaacccataaccttaaggttttggttaagagtgtggtgtcactctcgcttatgtggttgttctagcatcga 8128455  T
Q  101 tgtg 104  Q
    ||||    
T  8128454 tgtg 8128451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24838815 - 24838724
Alignment:
Q  1 ttgaacaccttataagtaaga-ggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttc 91  Q
    ||||||||||||||||||||| |||||||||||| | ||| |||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  24838815 ttgaacaccttataagtaagaaggatccataaacccgttgtcttaaggttttgggtaagagtgtgacgtctctcttgcttgtgtggttgttc 24838724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 14681555 - 14681662
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    ||||||||||| |||||||||||  |||||||| ||||| |||||||||| ||||||||||||||||||||||   |  |||||||||||||||||| ||    
T  14681555 ttgaacaccttgtaagtaagagggcccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctca--caagtgtggttgttctagccttga 14681652  T
Q  101 tgtggacggt 110  Q
    ||||||||||    
T  14681653 tgtggacggt 14681662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22566775 - 22566702
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctctt 75  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  22566775 ttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg-gtctctctt 22566702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 28300644 - 28300574
Alignment:
Q  39 gccttaaggtttcggg-taagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacg 108  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28300644 gccttaaggttttggggtaagagtgtggtgtctctcttgcttgtgtggttattctagcctcgatgtggacg 28300574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1085361 - 1085280
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtg 82  Q
    ||||||| || ||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  1085361 ttgaacaactcataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtttctcttccttgtg 1085280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 47129148 - 47129249
Alignment:
Q  9 cttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacg 108  Q
    |||||||||||||||| |||||||| ||| || ||||||||| ||||| |||||||||||||||||  |  ||||||||||||||||||| |||| ||||    
T  47129148 cttataagtaagaggacccataaacccatcgctttaaggttttgggtaggagtgtggtgtctctctcacaagtgtggttgttctagcctcaatgtagacg 47129247  T
Q  109 gt 110  Q
    ||    
T  47129248 gt 47129249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 36623014 - 36623114
Alignment:
Q  10 ttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacgg 109  Q
    ||||||||| |||||||||||||  |||||||||||||||| ||||| |||| ||||| ||||||| |||||||| |||||||  ||| |||||||||||    
T  36623014 ttataagtaggaggatccataaatccattgccttaaggttttgggtaggagtatggtgcctctcttacttgtgtgattgttctgaccttgatgtggacgg 36623113  T
Q  110 t 110  Q
    |    
T  36623114 t 36623114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16569241 - 16569316
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttg 76  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||  |||||||||| |||||||||||||    
T  16569241 ttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctcttg 16569316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16596421 - 16596346
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttg 76  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||  |||||||||| |||||||||||||    
T  16596421 ttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctcttg 16596346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 40094501 - 40094390
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttccccaaactcccca 125  Q
    ||||||||||||| | |||| |||| |||||||||||||  |||| |||| ||| |||||||||||||||| |||||| | || | ||||||||||||||    
T  40094501 ccataaactcattactttaaagttttgggtaagagtgtgacgtctttcttacttatgtggttgttctagccccgatgtagtcgatcccccaaactcccca 40094402  T
Q  126 gtgacccaacaa 137  Q
     |||||||||||    
T  40094401 atgacccaacaa 40094390  T

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Target: chr7; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 37532821 - 37532755
Alignment:
Q  44 aaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    ||||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  37532821 aaggttttgggtaagagtgtggtgtctctctagcttgtgctgttgttctagcctcgatgtggacggt 37532755  T

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Target: chr7; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 20599362 - 20599470
Alignment:
Q  4 aacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagag--tgtggtgtctctcttgcttgtgtggttgttctagcctcgat 101  Q
    ||||| |||||| ||||||||   |||||||||||||||||| |||| |||||||||  ||||||||||||||||||||| |||||||| || ||| |||    
T  20599362 aacactttataaataagaggacatataaactcattgccttaacgttttgggtaagagagtgtggtgtctctcttgcttgtatggttgttttaaccttgat 20599461  T
Q  102 gtggacggt 110  Q
    ||| |||||    
T  20599462 gtgaacggt 20599470  T

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Target: chr7; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 36534897 - 36534795
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||||| ||||||||  |  | |||||||||| |||||||||||||| |||||||   |  |||||||||||| ||||||||    
T  36534897 ttgaacaccttataagtaagaggacccataaacctaaagtcttaaggttttgggtaagagtgtggcgtctctc--acaagtgtggttgttccagcctcga 36534800  T
Q  101 tgtgg 105  Q
    |||||    
T  36534799 tgtgg 36534795  T

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Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 30244453 - 30244506
Alignment:
Q  57 agagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggt 110  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  30244453 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggacggt 30244506  T

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Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 30245256 - 30245315
Alignment:
Q  57 agagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccca 116  Q
    ||||||||||||||||||  ||||||||||||||| |||||| ||||||||||| |||||    
T  30245256 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcaatgtggacggtccccca 30245315  T

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Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 30253671 - 30253730
Alignment:
Q  57 agagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggttcccca 116  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||| || |||||    
T  30253671 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggactgtccccca 30253730  T

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Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 4124197 - 4124128
Alignment:
Q  5 acaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||| |||||||| |||||| | ||||||||||||| ||||||||| || ||| ||||||||||||||||    
T  4124197 acactttataagtgagaggaccaataaactcattgcattaaggttttggataaaagtgtggtgtctctct 4124128  T

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Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 21416229 - 21416181
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctct 74  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  21416229 ccataaacccattgccttagggttttgggtaagagtgtggtgtctctct 21416181  T

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Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43241540 - 43241616
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgc 77  Q
    ||||||||||||||||||| ||||  |||||||| |||| ||||||||||  ||||| ||| || ||||||||||||    
T  43241540 ttgaacaccttataagtaaaaggactcataaacttattgacttaaggttttaggtaaaagtatgatgtctctcttgc 43241616  T

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Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 23569090 - 23569043
Alignment:
Q  26 ccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctc 73  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  23569090 ccataaacccattgccttaaggttttgggtaagagtgtgatgtctctc 23569043  T

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Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 28301655 - 28301613
Alignment:
Q  2 tgaacaccttataagtaagaggatccataaactcattgcctta 44  Q
    ||||||||||||||||||||||| |||||||| ||||||||||    
T  28301655 tgaacaccttataagtaagaggacccataaacccattgcctta 28301613  T

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Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 45755010 - 45755072
Alignment:
Q  39 gccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgat 101  Q
    |||||||  ||| |||||| ||||||||||||| ||| ||||||||||||||| |||||||||    
T  45755010 gccttaaaattttgggtaaaagtgtggtgtctcccttacttgtgtggttgttcaagcctcgat 45755072  T

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Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 37393114 - 37393210
Alignment:
Q  11 tataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacg 108  Q
    ||||||||||| || ||||||||||| |||||| |||||| | |||| ||||||| ||||||    ||| |||||||| |||| ||||||||||||||    
T  37393114 tataagtaagatga-ccataaactcaatgccttgaggttttgagtaaaagtgtggcgtctcttccacttatgtggttgctctaacctcgatgtggacg 37393210  T

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Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 41910647 - 41910592
Alignment:
Q  53 ggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacg 108  Q
    |||||||||||||||| |||||  |  |||||||||||||| ||||||||||||||    
T  41910647 ggtaagagtgtggtgtttctctcacaagtgtggttgttctaacctcgatgtggacg 41910592  T

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Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 4719358 - 4719305
Alignment:
Q  52 gggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgg 105  Q
    ||||||||||||||| | ||||||| ||||| ||||| |||||||||| |||||    
T  4719358 gggtaagagtgtggtatttctcttgtttgtgcggttgctctagcctcgttgtgg 4719305  T

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Target: scaffold0027 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 47405 - 47519
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcga 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||| | |||||||||||||||||||| | |||||||||| ||||||    
T  47405 ttgaacaccttataagtaagagaatccataaacccattgccttaaagttttgggtaaaaatgtggtgtctctcttgcttgcgcggttgttctaacctcga 47504  T
Q  101 tgtggacggttcccc 115  Q
    |||||||||| ||||    
T  47505 tgtggacggtccccc 47519  T

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Target: scaffold0078 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 5035 - 5133
Alignment:
Q  9 cttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggac 107  Q
    ||||||||||| | || ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||    
T  5035 cttataagtaaaaagacccataaactcattgccttatggttttgggtaagagtgtggtgtctctctcgcttatgcggttgctctagcctcgatgtggac 5133  T

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Target: scaffold0078; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 5402 - 5477
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgtggtgtctctcttg 76  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| ||| || ||||||||||||||||||||||    
T  5402 ttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggtgtctctcttg 5477  T

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Target: scaffold0734 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5441 - 5546
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttc-gggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcg 99  Q
    |||||||||||||||||||||||  ||||||||  |||| ||||| ||||  ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  5441 ttgaacaccttataagtaagagggcccataaacatattgtcttaaagtttttgggtaagagtgtggtgtctctcttgcttgtggggttgttcaagcctcg 5540  T
Q  100 atgtgg 105  Q
    ||||||    
T  5541 atgtgg 5546  T

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Target: scaffold0734; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5822 - 5931
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaag-----gtttcgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagc 95  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||      ||| | ||||||||||||||||||| || |||||| |||||||| | |    
T  5822 ttgaacaccttataagtaagaggacccataaacccattgccttaagattaaattttgagtaagagtgtggtgtctcttttacttgtggggttgttcaaac 5921  T
Q  96 ctcgatgtgg 105  Q
     |||||||||    
T  5922 ttcgatgtgg 5931  T

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Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17569 - 17496
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaagg--tttcgggtaagagtgtggtgtctct 72  Q
    ||||||||||| |||||||||||| |||||||| ||| |||||||||  ||| |||||||||| ||||||||||    
T  17569 ttgaacaccttgtaagtaagaggacccataaacccatagccttaaggttttttgggtaagagtatggtgtctct 17496  T

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Target: scaffold0113 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39501 - 39588
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaactcattgccttaaggtttcgggtaagagtgt-ggtgtctctcttgcttgtgtggttg 88  Q
    |||||| |||||||||| |||||| | ||||||   |||||||||| ||| |||||| ||||| || ||||||||||||||||||||||    
T  39501 ttgaactccttataagtgagaggaactataaacatgttgccttaagtttt-gggtaaaagtgttggcgtctctcttgcttgtgtggttg 39588  T

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Target: scaffold0807 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 3127 - 3172
Alignment:
Q  5 acaccttataagtaagaggatccataaactcattgccttaaggttt 50  Q
    |||| |||||||| |||| ||| |||||||||||||||||||||||    
T  3127 acactttataagtgagagcatcaataaactcattgccttaaggttt 3172  T

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Target: scaffold0504 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10224 - 10192
Alignment:
Q  1 ttgaacaccttataagtaagaggatccataaac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  10224 ttgaacaccttataagtaagaggacccataaac 10192  T

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