View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5468_low_34 (Length: 251)

Name: NF5468_low_34
Description: NF5468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5468_low_34
NF5468_low_34
[»] chr3 (33 HSPs)
chr3 (1-238)||(50015818-50016066)
chr3 (24-103)||(44014711-44014790)
chr3 (70-116)||(14548680-14548726)
chr3 (24-117)||(19679241-19679334)
chr3 (54-107)||(47584524-47584577)
chr3 (32-92)||(27294435-27294495)
chr3 (25-103)||(3776304-3776382)
chr3 (26-92)||(22667492-22667558)
chr3 (26-92)||(22724131-22724197)
chr3 (71-116)||(25182947-25182992)
chr3 (34-103)||(33880480-33880549)
chr3 (32-117)||(40880869-40880954)
chr3 (63-119)||(2304223-2304279)
chr3 (32-120)||(3775772-3775860)
chr3 (34-102)||(31365111-31365178)
chr3 (62-118)||(34707447-34707503)
chr3 (27-103)||(43948732-43948808)
chr3 (27-119)||(45541633-45541725)
chr3 (23-79)||(51929843-51929899)
chr3 (32-99)||(20210849-20210916)
chr3 (34-101)||(31365232-31365298)
chr3 (64-103)||(50211813-50211852)
chr3 (25-88)||(53891809-53891872)
chr3 (38-100)||(25699125-25699187)
chr3 (32-98)||(37138365-37138431)
chr3 (25-103)||(41057233-41057311)
chr3 (25-103)||(49465579-49465657)
chr3 (36-113)||(24281115-24281192)
chr3 (70-103)||(28283558-28283591)
chr3 (53-118)||(37273197-37273262)
chr3 (25-118)||(43115119-43115212)
chr3 (55-103)||(2413623-2413671)
chr3 (63-103)||(44295605-44295645)
[»] chr8 (39 HSPs)
chr8 (24-103)||(16162838-16162917)
chr8 (32-119)||(2487929-2488016)
chr8 (41-119)||(30191071-30191149)
chr8 (35-118)||(6950385-6950468)
chr8 (53-100)||(12833441-12833488)
chr8 (32-103)||(12851254-12851327)
chr8 (50-100)||(1664450-1664500)
chr8 (53-103)||(7918723-7918773)
chr8 (36-118)||(11569382-11569464)
chr8 (62-104)||(24558928-24558970)
chr8 (53-119)||(39881663-39881729)
chr8 (25-123)||(43504809-43504907)
chr8 (25-102)||(9700080-9700157)
chr8 (63-119)||(3161575-3161631)
chr8 (73-117)||(8629520-8629564)
chr8 (27-103)||(44236739-44236815)
chr8 (53-92)||(1561366-1561405)
chr8 (27-118)||(7008662-7008752)
chr8 (63-118)||(14949929-14949984)
chr8 (32-103)||(26473646-26473717)
chr8 (32-123)||(45071432-45071523)
chr8 (53-116)||(45098915-45098978)
chr8 (50-100)||(1667110-1667160)
chr8 (50-100)||(1889074-1889124)
chr8 (56-98)||(7630141-7630183)
chr8 (32-98)||(7878448-7878514)
chr8 (53-99)||(24326113-24326159)
chr8 (61-99)||(26820225-26820263)
chr8 (32-118)||(34770931-34771017)
chr8 (25-103)||(43717848-43717925)
chr8 (54-103)||(6526195-6526244)
chr8 (50-115)||(31915232-31915297)
chr8 (56-97)||(35534815-35534856)
chr8 (58-123)||(38260566-38260631)
chr8 (74-119)||(41442416-41442461)
chr8 (53-117)||(4511092-4511156)
chr8 (32-92)||(14926903-14926963)
chr8 (63-103)||(42215042-42215082)
chr8 (26-98)||(43393687-43393759)
[»] chr4 (36 HSPs)
chr4 (37-118)||(3549481-3549562)
chr4 (32-123)||(7367975-7368066)
chr4 (63-119)||(46247267-46247323)
chr4 (32-103)||(28615413-28615483)
chr4 (32-103)||(44320027-44320098)
chr4 (53-118)||(2996636-2996701)
chr4 (53-113)||(18628495-18628555)
chr4 (63-119)||(46013265-46013321)
chr4 (32-118)||(6428081-6428167)
chr4 (32-98)||(19429391-19429457)
chr4 (54-103)||(22471352-22471401)
chr4 (33-117)||(10192351-10192434)
chr4 (32-116)||(37575857-37575941)
chr4 (61-113)||(47399553-47399605)
chr4 (32-119)||(1137774-1137861)
chr4 (71-118)||(27123312-27123359)
chr4 (32-119)||(36577463-36577550)
chr4 (36-119)||(42641564-42641647)
chr4 (32-99)||(42866150-42866217)
chr4 (65-103)||(4071956-4071994)
chr4 (65-103)||(4500909-4500947)
chr4 (64-98)||(11877898-11877932)
chr4 (73-103)||(49940128-49940158)
chr4 (73-103)||(50681050-50681080)
chr4 (65-103)||(50742790-50742828)
chr4 (33-98)||(1017111-1017176)
chr4 (53-118)||(8328061-8328126)
chr4 (53-118)||(19429454-19429519)
chr4 (50-103)||(22523758-22523811)
chr4 (63-116)||(31642258-31642311)
chr4 (32-89)||(32071955-32072012)
chr4 (54-103)||(39178209-39178258)
chr4 (53-117)||(4691912-4691976)
chr4 (32-92)||(11264390-11264450)
chr4 (64-100)||(42121555-42121591)
chr4 (67-123)||(50799986-50800042)
[»] chr2 (35 HSPs)
chr2 (32-117)||(13866942-13867027)
chr2 (26-118)||(28803445-28803537)
chr2 (62-119)||(5902500-5902557)
chr2 (26-103)||(37474843-37474919)
chr2 (54-118)||(787395-787459)
chr2 (32-119)||(4350752-4350839)
chr2 (32-103)||(11513974-11514045)
chr2 (32-123)||(40158776-40158867)
chr2 (32-103)||(41170688-41170759)
chr2 (53-119)||(2964751-2964817)
chr2 (25-87)||(28810366-28810428)
chr2 (27-103)||(39983423-39983499)
chr2 (63-118)||(1318299-1318354)
chr2 (32-103)||(8017512-8017583)
chr2 (140-203)||(11513985-11514048)
chr2 (25-124)||(28933880-28933979)
chr2 (147-206)||(35713283-35713342)
chr2 (64-119)||(43808620-43808675)
chr2 (61-119)||(1801730-1801788)
chr2 (65-103)||(3227652-3227690)
chr2 (32-98)||(19978030-19978096)
chr2 (53-103)||(32837401-32837451)
chr2 (65-115)||(39622017-39622067)
chr2 (50-99)||(5759514-5759563)
chr2 (26-87)||(15370238-15370299)
chr2 (53-118)||(29430821-29430886)
chr2 (65-101)||(8187407-8187443)
chr2 (53-121)||(12140592-12140660)
chr2 (52-100)||(13869049-13869097)
chr2 (76-112)||(27317449-27317485)
chr2 (64-96)||(38077026-38077058)
chr2 (27-103)||(40400816-40400892)
chr2 (26-82)||(40759259-40759315)
chr2 (67-123)||(43199740-43199796)
chr2 (32-92)||(43985298-43985358)
[»] chr1 (25 HSPs)
chr1 (29-120)||(4757399-4757490)
chr1 (56-114)||(4033962-4034020)
chr1 (36-97)||(35017667-35017727)
chr1 (39-119)||(31517668-31517748)
chr1 (26-118)||(32515356-32515448)
chr1 (54-118)||(34536221-34536285)
chr1 (32-123)||(4549462-4549553)
chr1 (32-123)||(18327067-18327158)
chr1 (56-103)||(43371836-43371883)
chr1 (71-118)||(49692012-49692059)
chr1 (65-118)||(42336678-42336731)
chr1 (63-123)||(4576863-4576923)
chr1 (3-99)||(28467206-28467297)
chr1 (28-116)||(51929379-51929467)
chr1 (32-118)||(12763386-12763473)
chr1 (32-103)||(36070259-36070330)
chr1 (53-103)||(1393030-1393080)
chr1 (52-102)||(4868478-4868528)
chr1 (61-119)||(37593634-37593692)
chr1 (61-119)||(38170640-38170698)
chr1 (26-103)||(2295175-2295251)
chr1 (50-103)||(4768768-4768821)
chr1 (33-81)||(2522696-2522744)
chr1 (40-120)||(8780353-8780433)
chr1 (35-119)||(43420320-43420404)
[»] chr7 (27 HSPs)
chr7 (53-119)||(25670528-25670594)
chr7 (62-119)||(36537970-36538027)
chr7 (32-116)||(23214920-23215004)
chr7 (37-99)||(20547316-20547378)
chr7 (32-116)||(3836604-3836688)
chr7 (33-100)||(529443-529510)
chr7 (32-103)||(20526525-20526595)
chr7 (64-123)||(22387849-22387908)
chr7 (53-123)||(8094364-8094434)
chr7 (32-118)||(33894690-33894776)
chr7 (66-99)||(29275009-29275042)
chr7 (32-119)||(43250620-43250707)
chr7 (32-99)||(6977498-6977565)
chr7 (64-119)||(30535625-30535680)
chr7 (33-103)||(425745-425815)
chr7 (33-123)||(1645622-1645712)
chr7 (65-103)||(17942149-17942187)
chr7 (57-99)||(27508278-27508320)
chr7 (33-103)||(32410618-32410688)
chr7 (50-123)||(33645899-33645973)
chr7 (53-103)||(34754752-34754802)
chr7 (73-103)||(40687508-40687538)
chr7 (21-89)||(27700076-27700145)
chr7 (74-103)||(30748997-30749026)
chr7 (53-118)||(44808221-44808286)
chr7 (58-103)||(48131415-48131460)
chr7 (72-112)||(4970752-4970792)
[»] chr6 (27 HSPs)
chr6 (50-119)||(33737632-33737701)
chr6 (56-124)||(2263249-2263317)
chr6 (54-119)||(769200-769265)
chr6 (26-103)||(32171298-32171375)
chr6 (32-119)||(26559160-26559247)
chr6 (23-118)||(30863309-30863404)
chr6 (65-118)||(32917260-32917313)
chr6 (50-118)||(32577925-32577993)
chr6 (23-123)||(33080490-33080590)
chr6 (70-118)||(33116647-33116695)
chr6 (71-118)||(2460111-2460158)
chr6 (56-103)||(2735148-2735195)
chr6 (32-103)||(10016701-10016772)
chr6 (76-123)||(33832238-33832285)
chr6 (73-103)||(9202952-9202982)
chr6 (32-116)||(9559462-9559543)
chr6 (150-195)||(6742910-6742955)
chr6 (32-81)||(8010457-8010506)
chr6 (53-98)||(8420139-8420184)
chr6 (70-123)||(31686322-31686375)
chr6 (53-118)||(33500422-33500487)
chr6 (32-96)||(2727804-2727868)
chr6 (70-118)||(19752765-19752813)
chr6 (63-119)||(27595519-27595575)
chr6 (71-119)||(27693399-27693447)
chr6 (63-103)||(31668435-31668475)
chr6 (63-119)||(34403917-34403973)
[»] chr5 (30 HSPs)
chr5 (53-103)||(12407672-12407722)
chr5 (32-92)||(19177534-19177594)
chr5 (32-91)||(10771809-10771868)
chr5 (32-119)||(12459922-12460009)
chr5 (53-100)||(21782598-21782645)
chr5 (32-118)||(11297117-11297203)
chr5 (50-112)||(29336699-29336761)
chr5 (53-118)||(11457161-11457226)
chr5 (32-97)||(36326092-36326157)
chr5 (26-87)||(40335788-40335849)
chr5 (35-103)||(5377121-5377189)
chr5 (50-110)||(7907953-7908013)
chr5 (58-118)||(10907441-10907501)
chr5 (31-115)||(32849244-32849328)
chr5 (32-103)||(912568-912639)
chr5 (56-99)||(4273322-4273365)
chr5 (51-118)||(19177051-19177118)
chr5 (32-103)||(25720338-25720409)
chr5 (60-99)||(38036008-38036047)
chr5 (25-119)||(4619769-4619863)
chr5 (37-119)||(10125644-10125726)
chr5 (32-118)||(11095416-11095502)
chr5 (73-119)||(37526161-37526207)
chr5 (53-119)||(37611157-37611223)
chr5 (73-119)||(37690598-37690644)
chr5 (53-119)||(37787887-37787953)
chr5 (26-116)||(42100377-42100466)
chr5 (53-93)||(444010-444050)
chr5 (66-98)||(4855778-4855810)
chr5 (53-117)||(38728466-38728530)
[»] scaffold0199 (1 HSPs)
scaffold0199 (50-100)||(6891-6941)
[»] scaffold0459 (1 HSPs)
scaffold0459 (32-116)||(6611-6695)
[»] scaffold0366 (1 HSPs)
scaffold0366 (32-116)||(6609-6693)
[»] scaffold0015 (1 HSPs)
scaffold0015 (53-123)||(68921-68991)


Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 50016066 - 50015818
Alignment:
Q  1 ccaaatataaaataaagtcaaattgggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50016066 ccaaatataaaataaagtcaaattgggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatga 50015967  T
Q  101 aaagaacgtatgacatgtttata-----------gaaccgtctcacaagttctctaaaacagtctcacatgtgattatgctagcaggtaagcgcaaataa 189  Q
    |||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50015966 aaagaacgtatgacatgtttataagatgtttatagaaccgtctcacaagttctctaaaacagtctcacatgtgattatgctagcaggtaagcgcaaataa 50015867  T
Q  190 atcaatacaaacaagtcttaaaggaatacttaccgttttattaagatat 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50015866 atcaatacaaacaagtcttaaaggaatacttaccgttttattaagatat 50015818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 44014711 - 44014790
Alignment:
Q  24 tgggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||| ||||||||||||||| | |||||||||| | |||||||||||||||||||||||||||| ||||||||||||    
T  44014711 tgggcctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaa 44014790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 14548680 - 14548726
Alignment:
Q  70 cacttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  14548680 cacttgtgagactgtttgagagagcttatgaaaacaacgtatgacat 14548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 19679241 - 19679334
Alignment:
Q  24 tgggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatg 117  Q
    ||||||| |||||||||| |||| | |||||||||| | |||||| |||||| || | | |||||||||||||| ||||| ||| |||||||||    
T  19679241 tgggcctatttggattgggttatttgagtttatctactagcataagcacttgcgaaaatctttgagagaacttacgaaaacaacttatgacatg 19679334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 47584577 - 47584524
Alignment:
Q  54 tatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaac 107  Q
    ||||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  47584577 tatctattgacataagcacttgtgagactatttgagagagcttatgaaaagaac 47584524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 27294495 - 27294435
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagaga 92  Q
    |||| |||||||||  | ||||||||||||| ||||| |||||||||||||||||||||||    
T  27294495 tttgaattggcttacttgagtttatctattgtcataagcacttgtgagactgtttgagaga 27294435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 3776304 - 3776382
Alignment:
Q  25 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||||  ||| ||| | | |||||||||| ||||||||  | |||||||| ||||||||||||||||||||||    
T  3776304 gggcctctttgttttgacttgtttgagtttatctactggcataagtaattgtgagaatgtttgagagaacttatgaaaa 3776382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 22667558 - 22667492
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagaga 92  Q
    ||||| ||| ||||||||||| | || ||||||| || ||||| |||||||||||||||||||||||    
T  22667558 ggcctatttcgattggcttatttgagcttatctactgacataagcacttgtgagactgtttgagaga 22667492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 22724197 - 22724131
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagaga 92  Q
    ||||| ||| ||||||||||| | || ||||||| || ||||| |||||||||||||||||||||||    
T  22724197 ggcctatttcgattggcttatttgagcttatctactgacataagcacttgtgagactgtttgagaga 22724131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 25182947 - 25182992
Alignment:
Q  71 acttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||||    
T  25182947 acttgtgagactgtttgagagagcttatgaaaacaacttatgacat 25182992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 33880480 - 33880549
Alignment:
Q  34 tggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||||||||| | || |||||||||| ||||| || ||| || |||||||| |||||||||||||||    
T  33880480 tggattggcttatttgagcttatctattgacataatcatttgagaaactgtttgggagaacttatgaaaa 33880549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 40880869 - 40880954
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatg 117  Q
    ||||||||| ||||| | || ||||||||||  || ||||   |||||||||||||||||| |||||||||| ||| |||||||||    
T  40880869 tttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 40880954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 2304223 - 2304279
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||||||||| ||| |||||||||| ||||||||  ||| |||||||||||    
T  2304223 gcataaacacttgtgaaactatttgagagaaattatgaaagcaacttatgacatgtt 2304279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 3775772 - 3775860
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgttt 120  Q
    ||||||||| ||||| | |||||||||| ||||||||||| |||| ||||||||||  ||| |||||  ||| ||| ||| ||||||||    
T  3775772 tttggattgccttatttgagtttatctactggcataaacaattgttagactgtttggcagagcttatagaaacaacttattacatgttt 3775860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 31365111 - 31365178
Alignment:
Q  34 tggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaa 102  Q
    ||||||||||||| | || ||||||||||||||||    ||||||||||||||| ||||||||||||||    
T  31365111 tggattggcttatttgagcttatctattggcataagtt-ttgtgagactgtttgggagaacttatgaaa 31365178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 34707447 - 34707503
Alignment:
Q  62 ggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||| | ||||||||||||||||||||||||| |||||| ||| | ||||||||    
T  34707447 ggcataagcgcttgtgagactgtttgagagaacttttgaaaacaacttgtgacatgt 34707503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 43948808 - 43948732
Alignment:
Q  27 gcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||| |||||||||||| || | |||| |||||||| ||||| || |||||||||||| || |||||| ||||||||    
T  43948808 gcctgtttggattggctaatttgagttaatctattgtcataagcatttgtgagactgtatgggagaacatatgaaaa 43948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 45541725 - 45541633
Alignment:
Q  27 gcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||| ||||||||| ||||| | || |||| || ||| |||||||||||| |||||||||   |||||||||||||| | | |||||||||||    
T  45541725 gcctgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgtt 45541633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 51929899 - 51929843
Alignment:
Q  23 ttgggcctctttggattggcttatctcagtttatctattggcataaacacttgtgag 79  Q
    |||||||| ||||||||| ||||| | || ||||||||| |||||||||||||||||    
T  51929899 ttgggcctgtttggattgacttatttgagcttatctattagcataaacacttgtgag 51929843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 20210849 - 20210916
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatg 99  Q
    |||||||||  |||| | || ||||||| || ||||| ||||||||||||||||||||||| ||||||    
T  20210849 tttggattgatttatttgaggttatctactgacataaccacttgtgagactgtttgagagatcttatg 20210916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 31365232 - 31365298
Alignment:
Q  34 tggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaa 101  Q
    ||||||||||||| | |||||||||||||||||||    |||||| |||||||| |||||||||||||    
T  31365232 tggattggcttatttgagtttatctattggcataattt-ttgtgacactgtttgggagaacttatgaa 31365298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 50211852 - 50211813
Alignment:
Q  64 cataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  50211852 cataagcacttgtaagactgtttgagagaacttatgaaaa 50211813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 53891809 - 53891872
Alignment:
Q  25 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttga 88  Q
    |||||| || |||||||||||| |||| ||||||| | ||||||||||||||||  ||||||||    
T  53891809 gggcctattcggattggcttatatcagcttatctactagcataaacacttgtgaacctgtttga 53891872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 25699125 - 25699187
Alignment:
Q  38 ttggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatga 100  Q
    ||||||||| | ||||||||||||| ||||| ||||| |||||||  |||||||| |||||||    
T  25699125 ttggcttatttgagtttatctattgacataagcacttatgagacttcttgagagagcttatga 25699187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 37138431 - 37138365
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttat 98  Q
    |||||||||||||||   | |||||||| || ||||||||||||||||||| ||||| |||| ||||    
T  37138431 tttggattggcttattagaatttatctactgacataaacacttgtgagactatttgacagaatttat 37138365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 41057311 - 41057233
Alignment:
Q  25 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||| |||| |||||||||| | || |||||||   |||||| |||||||||||||||||| ||||| || ||||||    
T  41057311 gggcctatttgaattggcttatttgagcttatctacatgcataagcacttgtgagactgtttgggagaatttgtgaaaa 41057233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 49465579 - 49465657
Alignment:
Q  25 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||| ||||||||| ||||| ||||||||| || |  ||||| ||||||||| | |||||  |||||||||||||||    
T  49465579 gggcctatttggattgacttatttcagtttatttactaccataagcacttgtgatattgtttcggagaacttatgaaaa 49465657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 24281192 - 24281115
Alignment:
Q  36 gattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatga 113  Q
    ||||| ||||| | ||| |||||| ||| |||| |||||||| || ||||||||||| |||||||||| ||| |||||    
T  24281192 gattgacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaacttatga 24281115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 28283558 - 28283591
Alignment:
Q  70 cacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||||||||||||||| ||||||||||||||    
T  28283558 cacttgtgagactgtttgaaagaacttatgaaaa 28283591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 37273262 - 37273197
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||| |||| |||||| |||| ||||||||||||| |||| |||||| ||| ||| ||||||||||    
T  37273262 ttatttattagcataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgt 37273197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 43115212 - 43115119
Alignment:
Q  25 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||| ||| |||| |||||| | || |||||||||| ||||| ||||||||||| ||||||  |||  ||||| ||| ||| ||||||||||    
T  43115212 gggcctgttttgatttgcttatataaggttatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgt 43115119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 2413623 - 2413671
Alignment:
Q  55 atctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||| |||||| ||||||| || |||||||||||| ||||||||||    
T  2413623 atctattagcataatcacttgtaagtctgtttgagagagcttatgaaaa 2413671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 44295645 - 44295605
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||| ||||||||| ||| ||||||||||||||||||||    
T  44295645 gcataagcacttgtgatactatttgagagaacttatgaaaa 44295605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 16162917 - 16162838
Alignment:
Q  24 tgggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||| ||||||||||||||| | |||||||||| | |||||||||||||||||||||||||||| ||||||||||||    
T  16162917 tgggcctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaa 16162838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 2487929 - 2488016
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||||||||| | |||| ||||| || ||||| |||||||||||||||||| ||||||||||||||| ||| ||| |||||||    
T  2487929 tttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttataacatgtt 2488016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 30191071 - 30191149
Alignment:
Q  41 gcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||| | ||||||||||||||||||| ||||||| |||||||||| |||| |||||| ||| ||| |||||||||||    
T  30191071 gcttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgtt 30191149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 6950468 - 6950385
Alignment:
Q  35 ggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||| ||||| | |||||||||| ||||||||||| |||||||| |||||| |||| |||||| ||| ||| ||||||||||    
T  6950468 ggattgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgt 6950385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 12833488 - 12833441
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatga 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  12833488 ttatctattggcataagcacttgtgagactgtttgagagaacatatga 12833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 12851327 - 12851254
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtg--agactgtttgagagaacttatgaaaa 103  Q
    ||||||||||||||||| |  ||| |||||||||||||||||||||  |||||||||| || ||||||||||||    
T  12851327 tttggattggcttatctgaacttacctattggcataaacacttgtgatagactgtttgggaaaacttatgaaaa 12851254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 1664500 - 1664450
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatga 100  Q
    |||||||||| | ||||||||||||||||||||||||| |||| |||||||    
T  1664500 agtttatctactagcataaacacttgtgagactgtttgggagagcttatga 1664450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 7918723 - 7918773
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||| | ||||||||||||||||||||||||| |||| ||||||||||    
T  7918723 ttatctactagcataaacacttgtgagactgtttgggagagcttatgaaaa 7918773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 11569382 - 11569464
Alignment:
Q  36 gattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||||||||  || ||||||  |||||||| ||||||||||||||||| ||||| |||||| ||| | | ||||||||||    
T  11569382 gattggcttatcagagcttatctgctggcataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgt 11569464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 24558970 - 24558928
Alignment:
Q  62 ggcataaacacttgtgagactgtttgagagaacttatgaaaag 104  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  24558970 ggcataaacacttgtgagactgtttgggagaacctatgaaaag 24558928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 39881663 - 39881729
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||||||||||||||||||||| ||||||  ||| ||| |||||| | | |||||||||||    
T  39881663 ttatctattggcataaacacttgtgagattgtttggaagagcttgtgaaaatagcttatgacatgtt 39881729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 43504907 - 43504809
Alignment:
Q  25 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    |||||| || |||||||||||| | || ||||||| |||| ||| |||||||| ||||||||  ||||||| ||||||| ||| || ||| ||||||||    
T  43504907 gggcctattaggattggcttatttaagcttatctactggcttaagcacttgtgtgactgtttcggagaactgatgaaaacaacttacgacttgtttata 43504809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 9700157 - 9700080
Alignment:
Q  25 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaa 102  Q
    |||||| ||||||||  ||||| | || ||||||| | |||||||||||||||||||| ||||||||| ||| |||||    
T  9700157 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaa 9700080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 3161575 - 3161631
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||||| ||||||||||||  || |||||||||||| ||| |||||||||||    
T  3161575 gcataaacactcgtgagactgttttcgaaaacttatgaaaataacttatgacatgtt 3161631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 8629564 - 8629520
Alignment:
Q  73 ttgtgagactgtttgagagaacttatgaaaagaacgtatgacatg 117  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||    
T  8629564 ttgtgagaccgtttgagagaacttatgaaaacaacttatgacatg 8629520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 44236739 - 44236815
Alignment:
Q  27 gcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||| ||||||||  ||||| | |||||||||| |||||||| |||||||||||||||| | |||||  ||||||||    
T  44236739 gcctgtttggattaccttatttgagtttatctactggcataagcacttgtgagactgttcgggagaatctatgaaaa 44236815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 1561405 - 1561366
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagaga 92  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  1561405 ttatctaatggcataaacacttgtgagattgtttgagaga 1561366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 7008752 - 7008662
Alignment:
Q  27 gcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||| |||| |||| ||||| | |||||||||| |||||||| |||||||||||| ||| |||||| |||||  ||| ||| ||||||||||    
T  7008752 gcctgtttgaattgacttatttgagtttatctactggcataagcacttgtgagac-gttagagagagcttatagaaacaacctatgacatgt 7008662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 14949984 - 14949929
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||||| ||||||||||||||  |||| |||||||||| ||| ||||||||||    
T  14949984 gcataaacatttgtgagactgtttaggagagcttatgaaaataacttatgacatgt 14949929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 26473646 - 26473717
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||| | |||||||  ||||||||||||||||||||||||| | |||| |||| ||| ||||||| ||||    
T  26473646 tttggaatagcttatcggagtttatctattggcataaacacttataagacagttttagaaaacttattaaaa 26473717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 45071523 - 45071432
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||||||||||| |  ||||||| || |||||| | ||| ||| ||||||  |||| |||||||||| ||| |||||||||| ||||    
T  45071523 tttggattggcttatctgaacttatctaatgacataaaaaattgggaggctgtttcggagagcttatgaaaacaacttatgacatgtctata 45071432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 45098915 - 45098978
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    ||||||| ||||||||||||||| |||| |||||  |||||| |||||||| ||| ||||||||    
T  45098915 ttatctactggcataaacacttgagagattgtttccgagaacctatgaaaacaacttatgacat 45098978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 1667160 - 1667110
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatga 100  Q
    |||||||||| ||||| ||||||||||||||||||||| || | |||||||    
T  1667160 agtttatctactggcacaaacacttgtgagactgtttgggaaatcttatga 1667110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 1889074 - 1889124
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatga 100  Q
    |||||||||| |||||||||||||| |||||||||||| || | |||||||    
T  1889074 agtttatctactggcataaacacttttgagactgtttgggaaagcttatga 1889124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 7630141 - 7630183
Alignment:
Q  56 tctattggcataaacacttgtgagactgtttgagagaacttat 98  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||    
T  7630141 tctattgacataaacacttgtcagactgtttaagagaacttat 7630183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 7878448 - 7878514
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttat 98  Q
    ||||||||||||||||| |||||||||| | ||||||  |||  |||||||||||| |||| |||||    
T  7878448 tttggattggcttatctaagtttatctacttgcataagaactaatgagactgtttgggagagcttat 7878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 24326159 - 24326113
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatg 99  Q
    ||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  24326159 ttatctactggcataagcacttgtgagactgtttgggagagcttatg 24326113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 99
Target Start/End: Complemental strand, 26820263 - 26820225
Alignment:
Q  61 tggcataaacacttgtgagactgtttgagagaacttatg 99  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  26820263 tggcataaacacttgtgaggctgtttgagaaaacttatg 26820225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 34771017 - 34770931
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||| ||| ||||| | |||||||||  | |||||| ||||||||| ||||||||||||| | |||||||| | | ||||||||||    
T  34771017 tttggtttgacttatttgagtttatctgctagcataagcacttgtgaaactgtttgagagatcctatgaaaacagcttatgacatgt 34770931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 43717848 - 43717925
Alignment:
Q  25 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||| ||||||||||||||| | || |||||||||| |||||    |||||||||| |||| |||||||||||||||    
T  43717848 gggcctatttggattggcttatttgagcttatctattgacataagtt-ttgtgagactatttgggagaacttatgaaaa 43717925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 6526195 - 6526244
Alignment:
Q  54 tatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||| |||||||| | ||||||||| |||||||||||||||| |||||    
T  6526195 tatctactggcataagcccttgtgagattgtttgagagaacttaggaaaa 6526244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 31915232 - 31915297
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgaca 115  Q
    ||||||||||||  |||||| |||||||||||||||||||| | |||||  ||| ||| |||||||    
T  31915232 agtttatctattcacataaatacttgtgagactgtttgagaaagcttatacaaacaacttatgaca 31915297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 35534815 - 35534856
Alignment:
Q  56 tctattggcataaacacttgtgagactgtttgagagaactta 97  Q
    |||||| |||||| ||||||||| ||||||||||||||||||    
T  35534815 tctattagcataagcacttgtgacactgtttgagagaactta 35534856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 38260631 - 38260566
Alignment:
Q  58 tattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||||||||||||||||| || |||||||||  |||  ||| ||| |||||||| ||||||    
T  38260631 tattggcataaacacttgtgagattgattgagagaatctatataaataacttatgacatatttata 38260566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 41442416 - 41442461
Alignment:
Q  74 tgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||||||||| |||||||||||||| ||  |||||||||||    
T  41442416 tgtgagactgtttgacagaacttatgaaaacaatttatgacatgtt 41442461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 4511156 - 4511092
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatg 117  Q
    ||||||| ||| |||| ||||||||||||| || || |||||||||||||| ||| || ||||||    
T  4511156 ttatctactggtataagcacttgtgagactattcgaaagaacttatgaaaacaacttaagacatg 4511092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 14926903 - 14926963
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagaga 92  Q
    ||||||||| ||||| | |  |||| || |||||||| |||||||||||||||||||||||    
T  14926903 tttggattgacttatttgaacttatttactggcataagcacttgtgagactgtttgagaga 14926963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 42215042 - 42215082
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||| ||||||||| |||||||| |||||||||||||||    
T  42215042 gcataagcacttgtgacactgtttgggagaacttatgaaaa 42215082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 43393687 - 43393759
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttat 98  Q
    ||||| ||||||||| ||||| | || ||||||| | ||| |||||||| |||||||||||| |||| |||||    
T  43393687 ggcctatttggattgacttatttaagcttatctacttgcaaaaacacttttgagactgtttgggagagcttat 43393759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 3549481 - 3549562
Alignment:
Q  37 attggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||||||| | ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |  |||||||||||    
T  3549481 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 3549562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 7367975 - 7368066
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||| ||||| | ||||||||||  ||||||||| |||||||||||||||| |||| || ||||||| | | |||||||||||||||    
T  7367975 tttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatgtttata 7368066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 46247323 - 46247267
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||    
T  46247323 gcataaacacttgtgagattgtctgagagatcttatgaaaagaacttatgacatgtt 46247267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 28615483 - 28615413
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||||| ||||| | |||||||||| | |||||||||||||||||| |||||| |||||||||||||||    
T  28615483 tttggattgacttatttaagtttatctactagcataaacacttgtgagattgtttg-gagaacttatgaaaa 28615413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 44320098 - 44320027
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||| |||| | || ||| ||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  44320098 tttggattggtttatttgagcttacctattggcataaacaattgtgagactgtttgggagagcttatgaaaa 44320027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 2996701 - 2996636
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||| ||||| ||||| ||||| ||||||||||||||||| |||||||||| ||| ||||||||||    
T  2996701 ttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgt 2996636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 18628495 - 18628555
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatga 113  Q
    ||||||| || |||||||||||||||||||||||| |||| |||||||||| ||| |||||    
T  18628495 ttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 46013265 - 46013321
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||| |||| ||||||    
T  46013265 gcataaacacttgtgagattgtctgagagatcttatgaaaagaacttatggcatgtt 46013321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 6428167 - 6428081
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||| |||| ||||| | || |||| |||||| |||| |||||||||||| ||||||||||  ||||||||| ||| ||||||||||    
T  6428167 tttgaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgt 6428081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 19429391 - 19429457
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttat 98  Q
    ||||||||||||||| | || |||| || ||| ||||||||||||||||||||||| |||| |||||    
T  19429391 tttggattggcttatttgagcttatttactggtataaacacttgtgagactgtttgggagagcttat 19429457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 22471401 - 22471352
Alignment:
Q  54 tatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||| || ||||| |||||||||||||||||| |||||||||||||||    
T  22471401 tatctactgacataagcacttgtgagactgtttgggagaacttatgaaaa 22471352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 10192434 - 10192351
Alignment:
Q  33 ttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatg 117  Q
    ||||||| |||||| | || |||| || ||||||||||| |||||| ||||||||||||||||||| |||| ||| ||| |||||    
T  10192434 ttggatttgcttatttgagcttatgtactggcataaacatttgtga-actgtttgagagaacttataaaaataacttataacatg 10192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 37575857 - 37575941
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    ||||||||| ||||| | |||||||||  | |||||||| || |||| | |||||||||||||||||||||| ||| ||| ||||    
T  37575857 tttggattgacttatttgagtttatctgctagcataaactctcgtgacattgtttgagagaacttatgaaaataacttataacat 37575941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 47399605 - 47399553
Alignment:
Q  61 tggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatga 113  Q
    ||||||||| ||||||||||||| |||||||||||| |||||| ||| |||||    
T  47399605 tggcataaaaacttgtgagactgattgagagaacttgtgaaaacaacttatga 47399553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 1137861 - 1137774
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||| |||||| | | |||||||| ||   ||||||||||||| |||||||  ||||||||||||||| | | |||||||||||    
T  1137861 tttggattagcttatttgattttatctagtgttttaaacacttgtgacactgtttaggagaacttatgaaaacatcttatgacatgtt 1137774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 27123312 - 27123359
Alignment:
Q  71 acttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||||||||||||||||||| |||||| ||| ||| ||||||||||    
T  27123312 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgt 27123359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 36577463 - 36577550
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||| ||||| | | ||| |||||||  |||| |||||||||||||||||  |||||||||  |||| ||| |||||||||||    
T  36577463 tttggattgacttatttgaatttgtctattgagataagcacttgtgagactgtttcggagaacttacaaaaacaacttatgacatgtt 36577550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 42641564 - 42641647
Alignment:
Q  36 gattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||||| | || ||||||| |||| | ||||||||||| |||||||   |||||||||||||| | | |||||||||||    
T  42641564 gattggcttatttgagcttatctactggcgtgaacacttgtgatactgttttcaagaacttatgaaaacaccttatgacatgtt 42641647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 42866217 - 42866150
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatg 99  Q
    ||||||||||||| | | ||||||| || |||||||||||| | ||||||| |||| |||||||||||    
T  42866217 tttggattggcttgtttgagtttatttactggcataaacacctttgagactctttgggagaacttatg 42866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 4071994 - 4071956
Alignment:
Q  65 ataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  4071994 ataagcacttgtgagactgtttgagagagcttatgaaaa 4071956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 4500947 - 4500909
Alignment:
Q  65 ataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  4500947 ataaacacttgtgagactgtttgtgagaacttataaaaa 4500909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 11877932 - 11877898
Alignment:
Q  64 cataaacacttgtgagactgtttgagagaacttat 98  Q
    |||||||||||||||||||||||| ||||||||||    
T  11877932 cataaacacttgtgagactgtttgtgagaacttat 11877898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 103
Target Start/End: Original strand, 49940128 - 49940158
Alignment:
Q  73 ttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||||||||||||||||||||||||    
T  49940128 ttgtgagactgtttgagagaacttatgaaaa 49940158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 103
Target Start/End: Original strand, 50681050 - 50681080
Alignment:
Q  73 ttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||||||||||||||||||||||||    
T  50681050 ttgtgagactgtttgagagaacttatgaaaa 50681080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 50742790 - 50742828
Alignment:
Q  65 ataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  50742790 ataagcacttgttagactgtttgagagaacttatgaaaa 50742828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 1017176 - 1017111
Alignment:
Q  33 ttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttat 98  Q
    |||||||| ||||| | || | ||||| || ||||||||||||||||||||||||  |||||||||    
T  1017176 ttggattgacttatttgagctaatctactgacataaacacttgtgagactgtttggaagaacttat 1017111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 8328061 - 8328126
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||||||||||||| ||||| ||||||||||||  | | |||||||||| ||  ||||||||||    
T  8328061 ttatctattggcataagcacttatgagactgtttggaatagcttatgaaaacaatttatgacatgt 8328126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 19429454 - 19429519
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||| |||||| ||||||||| ||||||||||||| |||| |||||| | | ||| ||||||||||    
T  19429454 ttatttattggtataaacactcgtgagactgtttgggagagcttatggagaaaacttatgacatgt 19429519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 22523811 - 22523758
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||| || |||||  |||||||||||||||||||  ||||||||||||    
T  22523811 agtttatctactgacataagtacttgtgagactgtttgagtcaacttatgaaaa 22523758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 31642311 - 31642258
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    |||||||||  ||||  |||||||||||||||||||||||| ||| ||||||||    
T  31642311 gcataaacaaatgtgtcactgtttgagagaacttatgaaaacaacttatgacat 31642258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 32072012 - 32071955
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgag 89  Q
    |||||| || ||||| | ||||||||||||| ||||| |||||||||||| |||||||    
T  32072012 tttggactgacttatttgagtttatctattgacataagcacttgtgagacagtttgag 32071955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 39178209 - 39178258
Alignment:
Q  54 tatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||| || ||||||||||| ||| |||||||| |||||||||||||||    
T  39178209 tatctactgacataaacacttttgacactgtttgggagaacttatgaaaa 39178258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 4691976 - 4691912
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatg 117  Q
    ||||||| || || || ||||||||||||| ||||||| |||||||| ||| ||| |||||||||    
T  4691976 ttatctactgtcacaatcacttgtgagactatttgagaaaacttatggaaacaacttatgacatg 4691912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 11264450 - 11264390
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagaga 92  Q
    ||||||||||||||| | ||| |||||| | |||||||||  |||||||||||||| ||||    
T  11264450 tttggattggcttatttgagtctatctactagcataaacatctgtgagactgtttgggaga 11264390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 42121591 - 42121555
Alignment:
Q  64 cataaacacttgtgagactgtttgagagaacttatga 100  Q
    ||||| || ||||||||||||||||||||||||||||    
T  42121591 cataagcatttgtgagactgtttgagagaacttatga 42121555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 50799986 - 50800042
Alignment:
Q  67 aaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    |||||||||||||| |||||| ||||||| ||| ||| ||| |||||||||| ||||    
T  50799986 aaacacttgtgagattgtttgggagaactaatgtaaacaacttatgacatgtctata 50800042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 13867027 - 13866942
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatg 117  Q
    ||||||||| | ||| | || ||||||| || |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  13867027 tttggattgacctatttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaacctatgacatg 13866942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 28803445 - 28803537
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||| ||||||||| ||||| | || |||||||  ||||||| ||| ||||||||||||||||||||| |||| ||| ||| ||||||||||    
T  28803445 ggcctatttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgt 28803537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 5902500 - 5902557
Alignment:
Q  62 ggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||||||||||||||||||||  |||||||||||||| | | |||||||||||    
T  5902500 ggcataaacacttgtgagactgtttggaagaacttatgaaaacagcttatgacatgtt 5902557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 37474919 - 37474843
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||| |||||||| |||||||  ||||||||||||  ||||||||||| ||||||| ||||||||| ||||||||||    
T  37474919 ggcctatttggattagcttatccgagtttatctatta-cataaacacttatgagactctttgagagagcttatgaaaa 37474843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 787459 - 787395
Alignment:
Q  54 tatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||| |||||||| ||||||||| |||||||| ||||||||||||||| | | ||||||||||    
T  787459 tatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgt 787395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 4350839 - 4350752
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||||||||| | || || |||| || ||||| |||||  |||| |||||||||||||||||||||| | | |||||||||||    
T  4350839 tttggattggcttatttgagcttctctactgacataagcacttaagagattgtttgagagaacttatgaaaacagcttatgacatgtt 4350752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 11514045 - 11513974
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||| |||| | || ||||||| | |||||| ||||||||||||||||| ||||| ||||||||||    
T  11514045 tttggattggtttatttgagattatctactagcataagcacttgtgagactgttttagagagcttatgaaaa 11513974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 40158867 - 40158776
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||||||||| | ||  |||||| || |||||  ||||||||||||| ||| | ||||||||||||| | | |||||||||||||||    
T  40158867 tttggattggcttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgtttata 40158776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 41170759 - 41170688
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||||||||||| | |||||||||| |  ||||||||||||||||||| ||||  | ||||||||||||    
T  41170759 tttggattggcttatttgagtttatctactaacataaacacttgtgagactatttggaataacttatgaaaa 41170688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 2964751 - 2964817
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||  |||||||||||||| |||| |||||||| ||||||||||||| | | |||||||||||    
T  2964751 ttatctaccggcataaacacttgcgagaatgtttgagtgaacttatgaaaacagcttatgacatgtt 2964817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 28810366 - 28810428
Alignment:
Q  25 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttg 87  Q
    |||||| ||||||||| ||||| | || || |||||||||||||||||||||||| |||||||    
T  28810366 gggcctgtttggattgacttatttgagcttctctattggcataaacacttgtgaggctgtttg 28810428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 39983499 - 39983423
Alignment:
Q  27 gcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||| |||||||| |||||| | || |||||||  ||||||||  |||||||||||| |||||||||||||| ||||    
T  39983499 gcctgtttggatttgcttatttgaggttatctaccggcataaatccttgtgagactgattgagagaacttataaaaa 39983423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 1318354 - 1318299
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||| |||||||||||||||||| |||| |||||||||| | | ||||||||||    
T  1318354 gcataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgt 1318299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 8017583 - 8017512
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||||| ||||| | || |||||||||| ||||| |||||||| || | |||| |||||||||||||||    
T  8017583 tttggattgacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaa 8017512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 11513985 - 11514048
Alignment:
Q  140 tctctaaaacagtctcacatgtgattatgctagcaggtaagcgcaaataaatcaatacaaacaa 203  Q
    ||||||||||||||||||| ||| ||||||||| || ||| | |||||||| |||| |||||||    
T  11513985 tctctaaaacagtctcacaagtgcttatgctagtagataatctcaaataaaccaatccaaacaa 11514048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 28933979 - 28933880
Alignment:
Q  25 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttatag 124  Q
    ||||||||||||||||||||||   || ||||||| || |||||||| || | || |||||||  ||| |||||||||| ||| |||| |||||| ||||    
T  28933979 gggcctctttggattggcttattagagcttatctagtgccataaacatttataagtctgtttggaagagcttatgaaaacaacttatggcatgttcatag 28933880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 35713283 - 35713342
Alignment:
Q  147 aacagtctcacatgtgattatgctagcaggtaagcgcaaataaatcaatacaaacaagtc 206  Q
    |||||||||||| ||| |||||| || || | ||| ||||||||||||||||||||||||    
T  35713283 aacagtctcacaagtgtttatgcaagtagattagctcaaataaatcaatacaaacaagtc 35713342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 43808675 - 43808620
Alignment:
Q  64 cataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||| |||||| ||||| ||||||||| |||||||||| ||| |||||||||||    
T  43808675 cataaatacttgtaagactatttgagagagcttatgaaaataacttatgacatgtt 43808620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 1801788 - 1801730
Alignment:
Q  61 tggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||| ||||||||| | |||||| ||||||||||||||| | | |||||||||||    
T  1801788 tggcataagcacttgtgatattgtttgggagaacttatgaaaacagcttatgacatgtt 1801730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 3227652 - 3227690
Alignment:
Q  65 ataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  3227652 ataaacacttgtgagactgtttgtgagaacttataaaaa 3227690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 19978096 - 19978030
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttat 98  Q
    ||||||||  ||||| | ||||||||||||   |||| |||||| ||||||||||||||||||||||    
T  19978096 tttggattcacttattttagtttatctattaaaataagcacttgcgagactgtttgagagaacttat 19978030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 32837451 - 32837401
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||| ||| ||||  ||||||||||||||||| |||||||||||||||    
T  32837451 ttatctagtggtataagtacttgtgagactgtttgggagaacttatgaaaa 32837401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 39622067 - 39622017
Alignment:
Q  65 ataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgaca 115  Q
    |||| |||||| || |||||||||||||||||||||||| ||| |||||||    
T  39622067 ataagcacttgcgacactgtttgagagaacttatgaaaacaacttatgaca 39622017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 5759514 - 5759563
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatg 99  Q
    |||||||||||||| ||||  ||||||||||||||||| |||| ||||||    
T  5759514 agtttatctattggtataagtacttgtgagactgtttgggagagcttatg 5759563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 15370238 - 15370299
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttg 87  Q
    ||||| ||||||||| ||||| | || ||||||| |||||||| || |||||||||||||||    
T  15370238 ggcctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttg 15370299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 29430886 - 29430821
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||| || |||||||||||||| |||| ||||  |||||||||||||| | | ||||||||||    
T  29430886 ttatctactgacataaacacttgtgggactatttggaagaacttatgaaaatagcttatgacatgt 29430821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 8187407 - 8187443
Alignment:
Q  65 ataaacacttgtgagactgtttgagagaacttatgaa 101  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  8187407 ataaccacttgtgagactgtttgaaagaacttatgaa 8187443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 12140660 - 12140592
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgttta 121  Q
    ||||||| || |||||||||||  || |  ||||||||||||||||||||| ||| |||||||| ||||    
T  12140660 ttatctactgacataaacacttacgaaatagtttgagagaacttatgaaaacaacttatgacattttta 12140592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 13869049 - 13869097
Alignment:
Q  52 tttatctattggcataaacacttgtgagactgtttgagagaacttatga 100  Q
    |||||||| || ||||| ||||| ||||||| |||||||||||||||||    
T  13869049 tttatctactgacataagcacttatgagactatttgagagaacttatga 13869097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 27317485 - 27317449
Alignment:
Q  76 tgagactgtttgagagaacttatgaaaagaacgtatg 112  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  27317485 tgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 38077026 - 38077058
Alignment:
Q  64 cataaacacttgtgagactgtttgagagaactt 96  Q
    ||||||||||||||||| |||||||||||||||    
T  38077026 cataaacacttgtgagattgtttgagagaactt 38077058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 40400816 - 40400892
Alignment:
Q  27 gcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||| ||||||||||||||| | ||  |||||| || |||||| |||||||| | ||||||| | ||||||||||||    
T  40400816 gcctgtttggattggcttatttaagcctatctactgacataaagacttgtgacattgtttgaaaaaacttatgaaaa 40400892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 40759315 - 40759259
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagact 82  Q
    ||||| ||||||||| ||||| | || |||||||||| ||||| |||||||||||||    
T  40759315 ggcctgtttggattgccttatttgagcttatctattgacataagcacttgtgagact 40759259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 43199740 - 43199796
Alignment:
Q  67 aaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||||||||||||||| ||||| ||| ||| | ||| | |||||||||||||    
T  43199740 aaacacttgtgagactgtttgggagaagttacgaatacaacttgtgacatgtttata 43199796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 43985358 - 43985298
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagaga 92  Q
    ||||||| | ||||| | |||||||||| || ||||||||||||| | |||||||||||||    
T  43985358 tttggatcgacttatttaagtttatctactgacataaacacttgtaaaactgtttgagaga 43985298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 4757490 - 4757399
Alignment:
Q  29 ctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgttt 120  Q
    |||||||| ||| ||||| | || |||||||||| ||||||||||||||||||  ||||  |||||||||||||| ||| ||||||||||||    
T  4757490 ctctttggtttgacttatttgagcttatctattgacataaacacttgtgagaccatttggcagaacttatgaaaacaacttatgacatgttt 4757399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 4033962 - 4034020
Alignment:
Q  56 tctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgac 114  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||    
T  4033962 tctactggcataaacacttgtgagattgtttgagagagcttatgaaaataacttatgac 4034020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 35017727 - 35017667
Alignment:
Q  36 gattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaactta 97  Q
    ||||||||||| | || |||||||||||||||||||||||||||| |||||| |||||||||    
T  35017727 gattggcttatttgagcttatctattggcataaacacttgtgagattgtttg-gagaactta 35017667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 31517668 - 31517748
Alignment:
Q  39 tggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||| | || |||| || |||||||| |||||||||||||||||| |||||||||| |||| |||  ||||||||||    
T  31517668 tggcttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgtt 31517748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 32515356 - 32515448
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||| |||||||| || ||| | |||||||||| |  ||||| |||||||||||||||||| |||| |||||| ||| | ||||||||||||    
T  32515356 ggcctgtttggattagcatatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgt 32515448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 34536285 - 34536221
Alignment:
Q  54 tatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||||| |||||||||||||||||||||||||||   |||||||||| | | ||||||||||    
T  34536285 tatctattgacataaacacttgtgagactgtttgagatggcttatgaaaacagcttatgacatgt 34536221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 4549462 - 4549553
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||||||||| | || ||||||| |||||||| || || |||||||||||| |||| |||||  ||| ||| |||||||||| ||||    
T  4549462 tttggattggcttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaacttatgacatgtctata 4549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 18327067 - 18327158
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||||||||| | || ||||||| || ||||| ||||| ||| ||| ||||  |||||||||||||| ||| ||||||||| |||||    
T  18327067 tttggattggcttatttgagcttatctactgtcataagcacttttgacactatttggaagaacttatgaaaacaacttatgacatggttata 18327158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 43371836 - 43371883
Alignment:
Q  56 tctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  43371836 tctactggcataagcacttgtgagactgtttgagagagcttatgaaaa 43371883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 49692012 - 49692059
Alignment:
Q  71 acttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||||    
T  49692012 acttgtgagactgtttgagagaacttatgaaaatagcttatgacatgt 49692059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 42336731 - 42336678
Alignment:
Q  65 ataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||| |||||||| |||||||||||| |||||||||||| ||| ||||||||||    
T  42336731 ataagcacttgtgcgactgtttgagataacttatgaaaacaacttatgacatgt 42336678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 4576923 - 4576863
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||||||| | |||||||||||| |||||||||||| |   |||||||||||||||    
T  4576923 gcataaacacttgcgggactgtttgagacaacttatgaaaatagtttatgacatgtttata 4576863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 28467206 - 28467297
Alignment:
Q  3 aaatataaaataaagtcaaattgggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatg 99  Q
    |||||| ||||||||||||||||      ||||||||||||| | | || |||||||||| || |||||||||||| |||||||| |||| ||||||    
T  28467206 aaatatgaaataaagtcaaattgt-----tttggattggcttgtttgagcttatctattgacacaaacacttgtgaaactgtttgggagagcttatg 28467297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 51929379 - 51929467
Alignment:
Q  28 cctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    ||||||||||||| ||| | | || ||||||| || ||||| ||| ||||| ||||||| |||||||||||||||| | | ||||||||    
T  51929379 cctctttggattgacttttttgagcttatctactgacataagcacctgtgacactgtttaagagaacttatgaaaacagcttatgacat 51929467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 12763473 - 12763386
Alignment:
Q  32 tttggattggcttatctc-agtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||||||||||| |  |||||||||||| |||||| || |||| |||||||||  ||||||||| ||||| | | ||||||||||    
T  12763473 tttggattggcttattttgagtttatctattagcataagcatttgtaagactgttttggagaacttacgaaaacagcttatgacatgt 12763386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 36070330 - 36070259
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||| |||| | |  ||||||  |||||||| |||||||||||||||||  |||||||||||||||    
T  36070330 tttggattggtttatttgatattatcttctggcataagcacttgtgagactgtttaggagaacttatgaaaa 36070259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 1393030 - 1393080
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||| ||| |||||||||||||||||  |||||||||| ||||||||||    
T  1393030 ttatcttttgacataaacacttgtgagagggtttgagagagcttatgaaaa 1393080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 4868528 - 4868478
Alignment:
Q  52 tttatctattggcataaacacttgtgagactgtttgagagaacttatgaaa 102  Q
    ||||||||||| ||||  |||||||||||||||||||||||  ||||||||    
T  4868528 tttatctattgacataggcacttgtgagactgtttgagagagtttatgaaa 4868478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 37593634 - 37593692
Alignment:
Q  61 tggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||||||||| |||||||||| || |||| ||||| | ||| |||||||||||    
T  37593634 tggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgtt 37593692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 38170640 - 38170698
Alignment:
Q  61 tggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||| |||||||||||||||| ||| |||| |||||||||| | | |||||||||||    
T  38170640 tggcatgaacacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgtt 38170698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 2295251 - 2295175
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||| |||| |||||||||| | || ||||||| ||||||||    ||||||||||||||| |||||||||||||||    
T  2295251 ggcctgtttgaattggcttatttgagcttatctactggcataagtt-ttgtgagactgtttgggagaacttatgaaaa 2295175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 4768768 - 4768821
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||| | ||||||||||||||||||||| ||||| || |||||| |||||    
T  4768768 agtttatcaactggcataaacacttgtgagacagtttgggaaaacttacgaaaa 4768821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 2522744 - 2522696
Alignment:
Q  33 ttggattggcttatctcagtttatctattggcataaacacttgtgagac 81  Q
    |||||||| ||||| | |||||||||| |||||||||||||||| ||||    
T  2522744 ttggattgacttatttgagtttatctactggcataaacacttgtaagac 2522696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 8780353 - 8780433
Alignment:
Q  40 ggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgttt 120  Q
    ||||||| | |||||||||| || | |||  ||||||||  |||||||||||| ||||| |||| ||| ||||||||||||    
T  8780353 ggcttatttgagtttatctaatgtcgtaactacttgtgaatctgtttgagagagcttataaaaacaacttatgacatgttt 8780433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 43420404 - 43420320
Alignment:
Q  35 ggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||| |||||| | || |||||||  | |||||||||||||||||||| ||| |||| |||||| ||| | | |||||||||||    
T  43420404 ggattagcttatttgagcttatctacagacataaacacttgtgagactgcttgtgagatcttatggaaacagcttatgacatgtt 43420320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 25670528 - 25670594
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||| ||||| | ||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  25670528 ttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgtt 25670594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 36538027 - 36537970
Alignment:
Q  62 ggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||||||||||||| |||||||||||||||||| ||| ||| |||||||||||    
T  36538027 ggcataaacacttgtgagattgtttgagagaacttatggaaacaacttatgacatgtt 36537970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 23215004 - 23214920
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    ||||||||| ||||| | |  ||||||| | |||||||||||| |||||||||||||||||| ||||||||| ||| ||||||||    
T  23215004 tttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacat 23214920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 20547316 - 20547378
Alignment:
Q  37 attggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatg 99  Q
    |||||||||| | |||||||||| || ||||||||||||||| ||||||||||||| ||||||    
T  20547316 attggcttattttagtttatctaatgacataaacacttgtgatactgtttgagagagcttatg 20547378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 3836604 - 3836688
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    ||||||||| ||||| | || ||||||| |||| ||| ||||||||| |||||||| ||||||||||||||| | | ||||||||    
T  3836604 tttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgacat 3836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 529510 - 529443
Alignment:
Q  33 ttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatga 100  Q
    |||||||| ||||| | || ||||||| ||||||||||||||||||| || |||| ||||||||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgaggctatttgggagaacttatga 529443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 20526595 - 20526525
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||||| ||||| | |||||||||||||| | |||   |||||||||||||||||||||||||||||||    
T  20526595 tttggattgacttatttgagtttatctattggtagaaatt-ttgtgagactgtttgagagaacttatgaaaa 20526525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 22387849 - 22387908
Alignment:
Q  64 cataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||| |||||||||||||| |||| |||||||||| ||| |||| ||||||||||    
T  22387849 cataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatgtttata 22387908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 8094434 - 8094364
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||| | |||||| ||||||||||||| |||||||||  ||||||||| | | |||||||||||||||    
T  8094434 ttatctactagcataagcacttgtgagactatttgagagattttatgaaaacagcttatgacatgtttata 8094364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 33894776 - 33894690
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||||| |||||| | || ||||| | || ||||| |||||||||||||||||| |||| |||||||||| | | ||||||||||    
T  33894776 tttggattagcttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgt 33894690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 29275042 - 29275009
Alignment:
Q  66 taaacacttgtgagactgtttgagagaacttatg 99  Q
    ||||||||||||||||||||||||||||||||||    
T  29275042 taaacacttgtgagactgtttgagagaacttatg 29275009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 43250620 - 43250707
Alignment:
Q  32 tttggattggcttatctcag-tttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||||||||| | || ||||| ||||||||||||||||||||| | |||||| ||  ||||||||||| | | |||||||||||    
T  43250620 tttggattggcttatttgagctttatatattggcataaacacttgtga-attgtttgggattacttatgaaaacagcttatgacatgtt 43250707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 6977565 - 6977498
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatg 99  Q
    ||||||||| |||||   ||||||||||||||||||| || |||||||| |||||||| || ||||||    
T  6977565 tttggattgacttattagagtttatctattggcataagcatttgtgagattgtttgagtgagcttatg 6977498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 30535680 - 30535625
Alignment:
Q  64 cataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||||| ||||||||||  ||||||||||||||| ||| ||||| |||||    
T  30535680 cataaacacttgagagactgttttggagaacttatgaaaacaacttatgatatgtt 30535625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 425745 - 425815
Alignment:
Q  33 ttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||||||| | || ||||||| |||||||| ||| ||||  |||||||| ||||||||| |||||    
T  425745 ttggattggcttatttgagattatctactggcataagcacatgtggcactgtttgggagaacttacgaaaa 425815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 1645622 - 1645712
Alignment:
Q  33 ttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||| |||| | |||||||||| || ||||| || |||||  ||||| || || |||||||| ||| ||| |||||||||||||||    
T  1645622 ttggattggattattttagtttatctactgacataagcaattgtggcactgtctgggaaaacttatgtaaacaacttatgacatgtttata 1645712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 17942187 - 17942149
Alignment:
Q  65 ataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  17942187 ataaacacctgtgagactgtctgagagaacttatgaaaa 17942149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 27508278 - 27508320
Alignment:
Q  57 ctattggcataaacacttgtgagactgtttgagagaacttatg 99  Q
    ||||||||||||  ||||||||||||||||||||||| |||||    
T  27508278 ctattggcataattacttgtgagactgtttgagagaatttatg 27508320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 32410688 - 32410618
Alignment:
Q  33 ttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||||||| | || |||||||||||||||| || |||||| |||||||   | ||||||||||||    
T  32410688 ttggattggcttatttgagcttatctattggcataagcatttgtgaaactgttttgaataacttatgaaaa 32410618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 33645899 - 33645973
Alignment:
Q  50 agtttatctattggcataaacacttgtgagact-gtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||||||| | |||| |||||||||||| ||| |||||| |||||| ||| ||| |||||||||| ||||    
T  33645899 agtttatctattgacgtaaaaacttgtgagactggttggagagagcttatggaaacaacttatgacatgtctata 33645973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 34754752 - 34754802
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||| || |||||||| ||||||||||||||||| |||| |||||    
T  34754752 ttatctattgacacaaacacttatgagactgtttgagagagcttaagaaaa 34754802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 103
Target Start/End: Original strand, 40687508 - 40687538
Alignment:
Q  73 ttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||||||||||||||||||||||||    
T  40687508 ttgtgagactgtttgagagaacttatgaaaa 40687538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 27700076 - 27700145
Alignment:
Q  21 aattgggcctctttggattggctt-atctcagtttatctattggcataaacacttgtgagactgtttgag 89  Q
    |||| ||||| |||||||||| || || | ||||||| ||||||||| |||||| |||||||||||||||    
T  27700076 aatttggcctatttggattggttttatttaagtttatttattggcatgaacactagtgagactgtttgag 27700145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 103
Target Start/End: Original strand, 30748997 - 30749026
Alignment:
Q  74 tgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||||||||||||||||||||||||||    
T  30748997 tgtgagactgtttgagagaacttatgaaaa 30749026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 44808286 - 44808221
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||| |||| |||||| || |||| ||||||||||| ||| |||||||||| ||| ||||||||||    
T  44808286 ttatttattagcataagcagttgtcagactgtttgatagaccttatgaaaataacttatgacatgt 44808221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 48131460 - 48131415
Alignment:
Q  58 tattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||    
T  48131460 tattggcataagcacttatgagactgtttggaagaacttatgaaaa 48131415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 4970752 - 4970792
Alignment:
Q  72 cttgtgagactgtttgagagaacttatgaaaagaacgtatg 112  Q
    |||||||||||||||| ||||||||||||||| ||| ||||    
T  4970752 cttgtgagactgtttgggagaacttatgaaaacaacttatg 4970792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 33737701 - 33737632
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||||||| | ||| |||| ||||||    
T  33737701 agtttatctattgacataaacacttgtgcaactgtttgagagaacttatgaacacaacttatggcatgtt 33737632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 2263317 - 2263249
Alignment:
Q  56 tctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttatag 124  Q
    ||||||| |||||||||||  || |||||||||||||||||||||||| ||| ||||||||||| ||||    
T  2263317 tctattgtcataaacacttaagaaactgtttgagagaacttatgaaaacaacatatgacatgttcatag 2263249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 769265 - 769200
Alignment:
Q  54 tatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||| |||||||||||||||||||||||   ||||||||||||| | | |||||||||||    
T  769265 tatctattggtataaacacttgtgagactgtttggatgaacttatgaaaacatcttatgacatgtt 769200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 32171298 - 32171375
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||| ||||||||| ||||| |||| |||  ||||| ||||| |||||| |||||||||||||||| ||||||||||    
T  32171298 ggcctgtttggattgtcttatttcagcttaagtattgacataagcacttgcgagactgtttgagagagcttatgaaaa 32171375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 26559160 - 26559247
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||  ||||| | |||||| ||| |||||||| || |||||||||||||||  |||||||||||||| ||| ||||| |||||    
T  26559160 tttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttatgatatgtt 26559247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 30863404 - 30863309
Alignment:
Q  23 ttgggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||||| |||||| || ||||| | ||  ||| ||||||||||||||||||| ||||| ||||  ||| |||||||||| ||| ||||||||||    
T  30863404 ttgggcctgtttggagtgacttatttgagcctatttattggcataaacacttgttagactctttggtagagcttatgaaaacaacttatgacatgt 30863309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 32917313 - 32917260
Alignment:
Q  65 ataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||||||||||||||||||| |||| |||||| ||| ||| ||||||||||    
T  32917313 ataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatgt 32917260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 32577925 - 32577993
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||| |||| ||||||||| ||||| || | ||||||||||| |||||||||| ||| ||||||||||    
T  32577925 agtttctctactggcataaatacttgggacattgtttgagagagcttatgaaaacaacttatgacatgt 32577993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 33080490 - 33080590
Alignment:
Q  23 ttgggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttat 122  Q
    |||||| | ||||||| ||||||| | || |||| || |||||||| ||||||||||| ||||| | |||| || |||||  ||| ||||||||||||||    
T  33080490 ttgggcatgtttggataggcttatttgagcttatttactggcataagcacttgtgagattgtttaatagaatttctgaaaccaacttatgacatgtttat 33080589  T
Q  123 a 123  Q
    |    
T  33080590 a 33080590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 33116695 - 33116647
Alignment:
Q  70 cacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||||||||||||||||| ||| ||||||||| ||| ||||||||||    
T  33116695 cacttgtgagactgtttgagggaatttatgaaaacaacttatgacatgt 33116647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 2460111 - 2460158
Alignment:
Q  71 acttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||||||||||||||||||| |||||| ||| ||| ||||||||||    
T  2460111 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgt 2460158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 2735195 - 2735148
Alignment:
Q  56 tctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||| |||||||||||  ||||||||||||||||| ||||||||||||    
T  2735195 tctagtggcataaacatctgtgagactgtttgagataacttatgaaaa 2735148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 10016772 - 10016701
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||| |||| | || |||||||  ||||||||||||||||||||| ||| ||||| || |||||||    
T  10016772 tttggattggtttatttgagcttatctacaggcataaacacttgtgagactatttcagagagctaatgaaaa 10016701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 33832238 - 33832285
Alignment:
Q  76 tgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    |||| |||||| |||||||||||||||| ||| |||||||||||||||    
T  33832238 tgagtctgtttaagagaacttatgaaaacaacttatgacatgtttata 33832285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 103
Target Start/End: Original strand, 9202952 - 9202982
Alignment:
Q  73 ttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||||||||||||||||||||||||    
T  9202952 ttgtgagactgtttgagagaacttatgaaaa 9202982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 9559462 - 9559543
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    ||||||||||||||  |  | |||||||||||||||||   || ||||||| |||| ||||||||||||||| ||| ||||||||    
T  9559462 tttggattggcttagttgcgcttatctattggcataaa---ttttgagactatttgggagaacttatgaaaacaacttatgacat 9559543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 6742910 - 6742955
Alignment:
Q  150 agtctcacatgtgattatgctagcaggtaagcgcaaataaatcaat 195  Q
    ||||||||| ||||||||||||| |||||||| ||||||| |||||    
T  6742910 agtctcacaagtgattatgctagtaggtaagctcaaataagtcaat 6742955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 8010506 - 8010457
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagac 81  Q
    ||||||||| ||||| | || ||||||||||||||||||| |||||||||    
T  8010506 tttggattgacttatgtgagcttatctattggcataaacatttgtgagac 8010457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 8420139 - 8420184
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttat 98  Q
    |||||||||| |||||||||||||||||||||| | |||| |||||    
T  8420139 ttatctattgacataaacacttgtgagactgttagtgagagcttat 8420184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 31686322 - 31686375
Alignment:
Q  70 cacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    ||||||||| | ||||||||||||||||| |||| ||| ||||||| |||||||    
T  31686322 cacttgtgacattgtttgagagaacttatcaaaacaacttatgacaagtttata 31686375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 33500422 - 33500487
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||| | ||||| ||||| ||||||||||||||| || |||||||||| ||  ||||||||||    
T  33500422 ttatctactagcatacacactcgtgagactgtttgagggagcttatgaaaacaatttatgacatgt 33500487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 2727804 - 2727868
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaactt 96  Q
    ||||||||||||| | | || ||||||| | |||||||||||||||| ||||||||  |||||||    
T  2727804 tttggattggcttgtttgagcttatctaatcgcataaacacttgtgacactgtttgttagaactt 2727868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 19752765 - 19752813
Alignment:
Q  70 cacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||||||||| ||||||||| ||||| |||| ||||||||| ||||    
T  19752765 cacttgtgagactatttgagagagcttataaaaacaacgtatgatatgt 19752813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 27595519 - 27595575
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||| ||||| |||||||||||| ||||| ||||| ||| ||| |||||||||||    
T  27595519 gcataagcacttatgagactgtttgggagaatttatggaaacaacttatgacatgtt 27595575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 27693399 - 27693447
Alignment:
Q  71 acttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||||| |||||||||| ||||| ||| ||| |||||||||||    
T  27693399 acttgtgagactatttgagagaatttatggaaacaacttatgacatgtt 27693447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 31668475 - 31668435
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||||||||||||| || |||||| ||||||||||    
T  31668475 gcataaacacttgtgagactattagagagagcttatgaaaa 31668435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 34403973 - 34403917
Alignment:
Q  63 gcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||||||| |||||||||  ||||| ||| ||||| ||| |||||||||||    
T  34403973 gcataaacacttgttagactgtttaggagaagttaagaaaacaacttatgacatgtt 34403917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 12407672 - 12407722
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||| |||||||||||||||||| |||||||||| ||||||||||    
T  12407672 ttatctattgacataaacacttgtgagacggtttgagagagcttatgaaaa 12407722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 19177594 - 19177534
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagaga 92  Q
    ||||||||| ||||| | |||||| |||||||||| |||||||||||||||||||| ||||    
T  19177594 tttggattgacttatttgagtttacctattggcatgaacacttgtgagactgtttgggaga 19177534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 10771809 - 10771868
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagag 91  Q
    ||||||||||||||| | || ||||||| |||||||| ||||||||||| ||||||||||    
T  10771809 tttggattggcttatttgagcttatctactggcataagcacttgtgagattgtttgagag 10771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 12459922 - 12460009
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||||| ||||| || | ||||||  || ||||| ||| |||||||||||||| |||||| |||||||| ||| |||||||||||    
T  12459922 tttggattgacttatttcggcttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaacttatgacatgtt 12460009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 21782598 - 21782645
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatga 100  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  21782598 ttatctactggcataaacacttgtgaggctgtttgagagagcttatga 21782645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 11297117 - 11297203
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||| |||| ||||| | || ||||||| |||||||||||||||| ||||||||||| ||| |||||| ||| ||| || |||||||    
T  11297117 tttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatgt 11297203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 29336761 - 29336699
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatg 112  Q
    |||||||||||||||| || |||||||||||||| |||||||| |||||| ||| ||| ||||    
T  29336761 agtttatctattggcaaaagcacttgtgagactgattgagagagcttatggaaacaacttatg 29336699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 11457226 - 11457161
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||||||||| ||||||||||||||||||||   ||| |||||| ||| ||| ||||||||||    
T  11457226 ttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgt 11457161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 36326157 - 36326092
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaactta 97  Q
    ||||||||| ||||| | || |||||||||||||||| |||| |||||| ||||||||| ||||||    
T  36326157 tttggattgtcttattttagcttatctattggcataagcactggtgagattgtttgagaaaactta 36326092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 40335788 - 40335849
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttg 87  Q
    ||||| ||||||||| ||||| | |||||||||| | ||| |||||||||||||||||||||    
T  40335788 ggcctgtttggattgacttatttgagtttatctactcgcacaaacacttgtgagactgtttg 40335849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 5377121 - 5377189
Alignment:
Q  35 ggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||||||||||| | || |||||||||| ||||| ||||||| |||||||| | || ||||||||||||    
T  5377121 ggattggcttatttgagcttatctattgacataagcacttgtaagactgttagcgataacttatgaaaa 5377189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 7908013 - 7907953
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgta 110  Q
    |||||||||| |  ||||||||||| ||||||||||||  |||||||||||||| ||||||    
T  7908013 agtttatctaataacataaacacttatgagactgtttggaagaacttatgaaaacaacgta 7907953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 10907501 - 10907441
Alignment:
Q  58 tattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    ||||||||| ||||||||||||||||||||  ||| |||||||||| ||| |||| |||||    
T  10907501 tattggcatgaacacttgtgagactgtttggaagagcttatgaaaacaacttatgtcatgt 10907441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 32849328 - 32849244
Alignment:
Q  31 ctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgaca 115  Q
    ||||| |||| ||||| | || ||||||| |  ||||| |||||||||| ||||||| ||||||||||||||| ||| |||||||    
T  32849328 ctttgaattgacttatttaagcttatctactatcataagcacttgtgaggctgtttgggagaacttatgaaaaaaacttatgaca 32849244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 912568 - 912639
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    ||||||||||||||| | || |||||||||| ||||| ||||||||  |||||||   ||||||||||||||    
T  912568 tttggattggcttattttaggttatctattgtcataagcacttgtggcactgtttagaagaacttatgaaaa 912639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 4273322 - 4273365
Alignment:
Q  56 tctattggcataaacacttgtgagactgtttgagagaacttatg 99  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||    
T  4273322 tctattggcataaacatttgtgagattgtttgagagaacctatg 4273365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 19177118 - 19177051
Alignment:
Q  51 gtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||||| |||| |||||||||||| ||| ||||||||||| || ||||||| |||  |||||||||    
T  19177118 gtttatctcttggtataaacacttgtcagattgtttgagagagctaatgaaaacaaccgatgacatgt 19177051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 25720338 - 25720409
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaa 103  Q
    |||| ||| |||||| | || ||||||| |||||||| ||||||||||||||| ||||||| ||||| ||||    
T  25720338 tttgaattagcttatttgaggttatctactggcataagcacttgtgagactgtctgagagagcttataaaaa 25720409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 38036008 - 38036047
Alignment:
Q  60 ttggcataaacacttgtgagactgtttgagagaacttatg 99  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  38036008 ttggcataaacacttgtgaaactgtttgggagaacttatg 38036047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 4619863 - 4619769
Alignment:
Q  25 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||||||||||||||| |  |||||| |  || ||||| ||||||  | |||||||| |||| |||||||||| |||  ||||||||||    
T  4619863 gggcctctttggattggcttatttgtgtttatttgctgacataagcacttgcaacactgtttgggagagcttatgaaaacaactaatgacatgtt 4619769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 10125644 - 10125726
Alignment:
Q  37 attggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||| | || ||||||| || ||| | ||||||||| | ||| |||||||||||||| ||| ||| |||||||||||    
T  10125644 attggcttatttaagcttatctactgacatgagcacttgtgacattgtctgagagaacttatgtaaacaacttatgacatgtt 10125726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 11095416 - 11095502
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 118  Q
    |||||| ||| |||| | || ||||||| || ||||||||||||||| | ||||||||||||||| || ||| | | ||||||||||    
T  11095416 tttggactggtttatttaagcttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaacagcttatgacatgt 11095502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 37526161 - 37526207
Alignment:
Q  73 ttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||||||||||||| |||||||| | ||| |||||||||||    
T  37526161 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgtt 37526207  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 37611157 - 37611223
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||| ||||| ||  |||||||||| ||||||||||| |||||||||| ||| | |||||||||    
T  37611157 ttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgtt 37611223  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 37690598 - 37690644
Alignment:
Q  73 ttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    |||||||||||||||||||| |||||||| | ||| |||||||||||    
T  37690598 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgtt 37690644  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 37787887 - 37787953
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtt 119  Q
    ||||||| ||||| ||  |||||||||| ||||||||||| |||||||||| ||| | |||||||||    
T  37787887 ttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgtt 37787953  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 42100466 - 42100377
Alignment:
Q  26 ggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    ||||| ||||||| ||||||| | || |||||||||||||||||   ||||| |||||| ||||||||||| |||||| | | ||||||||    
T  42100466 ggcctgtttggatgggcttatttgagcttatctattggcataaa-ttttgtgtgactgtgtgagagaacttgtgaaaatagcttatgacat 42100377  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 444050 - 444010
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaa 93  Q
    ||||||| | ||||||||||||||||||||||||| |||||    
T  444050 ttatctaattgcataaacacttgtgagactgtttgggagaa 444010  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 4855810 - 4855778
Alignment:
Q  66 taaacacttgtgagactgtttgagagaacttat 98  Q
    ||||||||||||||||||||||||||| |||||    
T  4855810 taaacacttgtgagactgtttgagagagcttat 4855778  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 38728530 - 38728466
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatg 117  Q
    ||||||||||| |||||||| |||| || |||||| |||| |||||||||| | | |||||||||    
T  38728530 ttatctattggtataaacacctgtgtgattgtttgggagagcttatgaaaatagcttatgacatg 38728466  T

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Target: scaffold0199 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 6941 - 6891
Alignment:
Q  50 agtttatctattggcataaacacttgtgagactgtttgagagaacttatga 100  Q
    |||||||||| | ||||||||||||||||||||||||| |||| |||||||    
T  6941 agtttatctactagcataaacacttgtgagactgtttgggagagcttatga 6891  T

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Target: scaffold0459 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 6695 - 6611
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    ||||||||| ||||| | || |||| |||||| |||| |||||||||||| ||||||||||  ||||||||| ||  ||||||||    
T  6695 tttggattgacttatttgagcttatatattggtataatcacttgtgagacagtttgagagagattatgaaaacaagttatgacat 6611  T

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Target: scaffold0366 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 6693 - 6609
Alignment:
Q  32 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacat 116  Q
    ||||||||| ||||| | || |||| |||||| |||| |||||||||||| ||||||||||  ||||||||| ||  ||||||||    
T  6693 tttggattgacttatttgagcttatatattggtataatcacttgtgagacagtttgagagagattatgaaaacaagttatgacat 6609  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 68921 - 68991
Alignment:
Q  53 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttata 123  Q
    |||| ||| ||||||| ||||| ||||| |||||| || |||||||||||| | |||||||||||| ||||    
T  68921 ttatatataggcataagcacttatgagagtgtttgggaaaacttatgaaaacagcgtatgacatgtctata 68991  T

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