View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5470_low_2 (Length: 483)

Name: NF5470_low_2
Description: NF5470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5470_low_2
NF5470_low_2
[»] chr7 (54 HSPs)
chr7 (18-472)||(45976926-45977384)
chr7 (402-461)||(26459424-26459483)
chr7 (402-455)||(25021355-25021408)
chr7 (402-461)||(18363699-18363758)
chr7 (402-461)||(48771941-48772000)
chr7 (402-460)||(42836016-42836074)
chr7 (401-457)||(15905691-15905747)
chr7 (402-470)||(23552121-23552189)
chr7 (397-461)||(39499733-39499797)
chr7 (402-461)||(17041026-17041085)
chr7 (402-461)||(24513800-24513859)
chr7 (402-461)||(30442491-30442550)
chr7 (399-470)||(36803632-36803703)
chr7 (402-461)||(39631847-39631906)
chr7 (402-461)||(43215187-43215246)
chr7 (405-471)||(19553460-19553525)
chr7 (404-461)||(11720974-11721031)
chr7 (402-455)||(21854551-21854604)
chr7 (402-455)||(25590614-25590667)
chr7 (404-461)||(41519278-41519335)
chr7 (406-455)||(45709728-45709777)
chr7 (405-461)||(21877814-21877870)
chr7 (402-461)||(22760866-22760925)
chr7 (402-461)||(22927479-22927538)
chr7 (402-461)||(23301616-23301675)
chr7 (406-453)||(25956314-25956361)
chr7 (402-461)||(30579338-30579397)
chr7 (402-461)||(33869459-33869518)
chr7 (402-461)||(37233586-37233645)
chr7 (397-455)||(20952169-20952227)
chr7 (403-461)||(23595733-23595791)
chr7 (402-455)||(20335851-20335904)
chr7 (406-455)||(43590914-43590963)
chr7 (402-450)||(45559203-45559251)
chr7 (402-461)||(5273604-5273663)
chr7 (402-461)||(5579248-5579307)
chr7 (402-461)||(7744126-7744185)
chr7 (402-453)||(7801183-7801234)
chr7 (402-461)||(15137556-15137615)
chr7 (402-461)||(31835195-31835254)
chr7 (402-453)||(41487365-41487416)
chr7 (425-463)||(5934147-5934185)
chr7 (403-461)||(42711962-42712020)
chr7 (402-452)||(48039670-48039720)
chr7 (402-455)||(2446311-2446364)
chr7 (402-463)||(25655240-25655301)
chr7 (406-455)||(35119390-35119439)
chr7 (406-455)||(35513473-35513522)
chr7 (406-455)||(37085569-37085618)
chr7 (399-427)||(4566476-4566504)
chr7 (402-470)||(17113798-17113866)
chr7 (402-461)||(24046536-24046595)
chr7 (402-470)||(38374604-38374672)
chr7 (402-454)||(48125195-48125247)
[»] chr6 (26 HSPs)
chr6 (274-383)||(3550650-3550759)
chr6 (402-470)||(12188308-12188376)
chr6 (403-455)||(6776627-6776679)
chr6 (399-466)||(34293825-34293892)
chr6 (402-455)||(33549107-33549160)
chr6 (402-470)||(1056690-1056758)
chr6 (402-453)||(30127403-30127454)
chr6 (403-461)||(10338188-10338246)
chr6 (402-452)||(32613163-32613213)
chr6 (402-455)||(13227178-13227231)
chr6 (406-455)||(21418477-21418526)
chr6 (406-455)||(24641210-24641259)
chr6 (402-455)||(31623011-31623064)
chr6 (402-461)||(3779342-3779401)
chr6 (399-450)||(13441050-13441101)
chr6 (406-461)||(24507550-24507605)
chr6 (410-461)||(28363948-28363999)
chr6 (283-381)||(31746443-31746541)
chr6 (402-451)||(6758446-6758495)
chr6 (402-451)||(12234531-12234580)
chr6 (402-455)||(14557965-14558018)
chr6 (402-450)||(22696-22744)
chr6 (403-439)||(6663149-6663185)
chr6 (317-381)||(8809764-8809828)
chr6 (403-463)||(27989669-27989729)
chr6 (406-470)||(32201890-32201954)
[»] chr3 (46 HSPs)
chr3 (402-463)||(46518631-46518692)
chr3 (402-465)||(31788980-31789043)
chr3 (402-455)||(4222144-4222197)
chr3 (399-455)||(28928899-28928955)
chr3 (402-461)||(5499421-5499480)
chr3 (402-461)||(30311309-30311368)
chr3 (402-461)||(53412948-53413007)
chr3 (402-463)||(203093-203154)
chr3 (402-455)||(31520625-31520678)
chr3 (409-461)||(7975428-7975480)
chr3 (402-461)||(10499123-10499182)
chr3 (402-461)||(27093375-27093434)
chr3 (406-455)||(2667869-2667918)
chr3 (402-455)||(16354912-16354965)
chr3 (402-455)||(26988999-26989051)
chr3 (410-455)||(32651458-32651503)
chr3 (402-455)||(36720384-36720437)
chr3 (402-455)||(47454637-47454690)
chr3 (402-470)||(40063622-40063690)
chr3 (402-461)||(14186651-14186709)
chr3 (402-461)||(15048075-15048134)
chr3 (402-455)||(10445159-10445213)
chr3 (407-461)||(11612307-11612361)
chr3 (406-455)||(4844531-4844580)
chr3 (406-455)||(4870227-4870276)
chr3 (406-463)||(8075139-8075196)
chr3 (406-455)||(14339617-14339666)
chr3 (402-455)||(51903898-51903951)
chr3 (399-431)||(10969938-10969970)
chr3 (406-446)||(16991549-16991589)
chr3 (421-461)||(47279418-47279458)
chr3 (402-461)||(2597234-2597293)
chr3 (406-461)||(8170679-8170734)
chr3 (406-461)||(19154638-19154693)
chr3 (402-453)||(28703426-28703477)
chr3 (402-461)||(37788479-37788538)
chr3 (402-453)||(42799769-42799820)
chr3 (397-455)||(27923063-27923121)
chr3 (402-455)||(8051217-8051270)
chr3 (402-471)||(16212976-16213045)
chr3 (402-455)||(30232333-30232386)
chr3 (409-465)||(2709387-2709443)
chr3 (399-455)||(13808905-13808961)
chr3 (402-470)||(26481930-26481998)
chr3 (402-450)||(34062575-34062623)
chr3 (403-455)||(49494166-49494218)
[»] chr5 (34 HSPs)
chr5 (402-458)||(21549154-21549210)
chr5 (402-455)||(29075784-29075837)
chr5 (402-471)||(30883202-30883271)
chr5 (402-461)||(30109322-30109381)
chr5 (402-470)||(34984809-34984877)
chr5 (402-461)||(87437-87496)
chr5 (405-456)||(22020881-22020932)
chr5 (402-461)||(25627060-25627119)
chr5 (402-453)||(26598527-26598578)
chr5 (403-461)||(16436622-16436679)
chr5 (274-383)||(28449225-28449334)
chr5 (402-470)||(7918474-7918542)
chr5 (402-470)||(18596006-18596074)
chr5 (402-459)||(43230790-43230849)
chr5 (402-461)||(14285164-14285223)
chr5 (402-461)||(16457813-16457872)
chr5 (410-461)||(43442207-43442258)
chr5 (397-455)||(21589286-21589344)
chr5 (406-455)||(14495825-14495874)
chr5 (406-455)||(29692406-29692455)
chr5 (402-454)||(22737085-22737137)
chr5 (406-461)||(892488-892543)
chr5 (396-455)||(16773804-16773863)
chr5 (402-461)||(17028278-17028337)
chr5 (412-463)||(37258378-37258429)
chr5 (403-461)||(43241696-43241754)
chr5 (406-455)||(1410679-1410728)
chr5 (402-455)||(8278295-8278348)
chr5 (399-452)||(14804693-14804746)
chr5 (420-465)||(17761365-17761410)
chr5 (398-455)||(18437084-18437141)
chr5 (402-455)||(30735090-30735143)
chr5 (426-470)||(84851-84895)
chr5 (196-236)||(28449370-28449410)
[»] chr2 (48 HSPs)
chr2 (397-461)||(42327409-42327473)
chr2 (402-461)||(16918592-16918651)
chr2 (394-455)||(42922409-42922470)
chr2 (402-461)||(29503274-29503333)
chr2 (402-461)||(42602557-42602616)
chr2 (403-456)||(3001383-3001436)
chr2 (402-463)||(16381666-16381727)
chr2 (402-461)||(34041602-34041661)
chr2 (402-461)||(37480078-37480137)
chr2 (402-461)||(40416404-40416463)
chr2 (402-455)||(1729819-1729872)
chr2 (405-470)||(12994381-12994446)
chr2 (402-455)||(14500280-14500333)
chr2 (318-383)||(37532742-37532807)
chr2 (399-455)||(33962804-33962860)
chr2 (402-461)||(4438993-4439052)
chr2 (402-461)||(5147693-5147752)
chr2 (402-455)||(7799055-7799108)
chr2 (402-455)||(39714995-39715048)
chr2 (402-461)||(1435067-1435126)
chr2 (402-461)||(11062363-11062422)
chr2 (402-461)||(11251090-11251149)
chr2 (410-461)||(12086143-12086194)
chr2 (402-453)||(19322771-19322822)
chr2 (402-461)||(23052537-23052596)
chr2 (402-461)||(30359657-30359716)
chr2 (407-453)||(6859334-6859380)
chr2 (405-455)||(12982516-12982566)
chr2 (407-461)||(21213777-21213831)
chr2 (402-456)||(29197395-29197449)
chr2 (402-452)||(37755994-37756044)
chr2 (402-455)||(4060234-4060287)
chr2 (399-456)||(7667488-7667545)
chr2 (410-455)||(18259741-18259786)
chr2 (402-455)||(19016034-19016087)
chr2 (403-456)||(24191842-24191895)
chr2 (402-455)||(28846694-28846747)
chr2 (402-446)||(342398-342442)
chr2 (399-455)||(2311721-2311777)
chr2 (399-463)||(7415995-7416059)
chr2 (423-463)||(10449046-10449086)
chr2 (403-455)||(12801293-12801345)
chr2 (399-470)||(13519057-13519129)
chr2 (417-461)||(17737638-17737682)
chr2 (402-454)||(19244112-19244164)
chr2 (399-455)||(29964815-29964871)
chr2 (402-470)||(41908643-41908711)
chr2 (291-375)||(44029680-44029764)
[»] chr8 (39 HSPs)
chr8 (402-461)||(2203495-2203554)
chr8 (402-463)||(6569783-6569844)
chr8 (402-455)||(16852343-16852396)
chr8 (402-453)||(3624583-3624634)
chr8 (402-461)||(19703501-19703560)
chr8 (402-455)||(30483904-30483957)
chr8 (402-454)||(20994479-20994531)
chr8 (402-461)||(18540301-18540360)
chr8 (402-461)||(28783063-28783122)
chr8 (402-461)||(44780128-44780187)
chr8 (399-461)||(35690078-35690140)
chr8 (402-455)||(968365-968418)
chr8 (402-455)||(5264547-5264600)
chr8 (402-463)||(12988431-12988492)
chr8 (406-463)||(35826318-35826375)
chr8 (402-454)||(3826798-3826850)
chr8 (402-458)||(7286210-7286266)
chr8 (402-461)||(23361663-23361722)
chr8 (402-461)||(26688868-26688927)
chr8 (402-452)||(14254730-14254780)
chr8 (402-456)||(29431014-29431068)
chr8 (399-461)||(36205195-36205257)
chr8 (402-455)||(23874402-23874455)
chr8 (402-455)||(29858069-29858122)
chr8 (402-455)||(35641921-35641974)
chr8 (402-453)||(6530810-6530861)
chr8 (402-453)||(8485002-8485053)
chr8 (401-452)||(11492096-11492147)
chr8 (406-461)||(11819783-11819838)
chr8 (402-461)||(18897169-18897228)
chr8 (402-461)||(35287719-35287778)
chr8 (402-455)||(4830490-4830543)
chr8 (402-451)||(5801050-5801099)
chr8 (397-454)||(6436576-6436633)
chr8 (402-455)||(8794365-8794418)
chr8 (296-381)||(9445345-9445430)
chr8 (417-461)||(6536538-6536582)
chr8 (419-455)||(7140729-7140765)
chr8 (402-450)||(22268958-22269006)
[»] chr4 (44 HSPs)
chr4 (402-461)||(37109365-37109424)
chr4 (402-448)||(27965537-27965583)
chr4 (402-455)||(46545714-46545767)
chr4 (402-451)||(51250546-51250595)
chr4 (403-471)||(13901746-13901814)
chr4 (402-453)||(37443705-37443756)
chr4 (414-461)||(38869783-38869830)
chr4 (402-452)||(9241048-9241098)
chr4 (406-456)||(29312271-29312321)
chr4 (285-383)||(43128045-43128143)
chr4 (402-455)||(7292818-7292871)
chr4 (402-455)||(19238597-19238650)
chr4 (402-470)||(37274464-37274533)
chr4 (399-463)||(13265120-13265184)
chr4 (402-470)||(31826612-31826680)
chr4 (402-453)||(1730511-1730562)
chr4 (402-461)||(7949468-7949527)
chr4 (402-461)||(31759672-31759731)
chr4 (402-461)||(37720228-37720287)
chr4 (296-383)||(47129246-47129333)
chr4 (402-452)||(55427223-55427273)
chr4 (402-455)||(12798687-12798740)
chr4 (402-455)||(28635699-28635752)
chr4 (402-455)||(39509073-39509126)
chr4 (402-455)||(41346983-41347036)
chr4 (402-455)||(2622415-2622472)
chr4 (402-470)||(8030209-8030277)
chr4 (402-470)||(19680793-19680861)
chr4 (401-461)||(49576908-49576968)
chr4 (402-461)||(4249180-4249239)
chr4 (404-455)||(9936981-9937032)
chr4 (404-455)||(21660164-21660215)
chr4 (404-455)||(21668928-21668979)
chr4 (402-453)||(29195098-29195149)
chr4 (397-455)||(17618279-17618337)
chr4 (402-452)||(41683752-41683802)
chr4 (399-463)||(5450090-5450157)
chr4 (403-456)||(43623463-43623516)
chr4 (406-455)||(43728402-43728451)
chr4 (408-452)||(2185055-2185099)
chr4 (417-461)||(23377974-23378018)
chr4 (402-470)||(33619209-33619277)
chr4 (401-453)||(39030135-39030187)
chr4 (399-463)||(52254416-52254480)
[»] chr1 (49 HSPs)
chr1 (402-461)||(33700787-33700846)
chr1 (399-461)||(26232400-26232462)
chr1 (410-463)||(8177194-8177247)
chr1 (402-455)||(9165215-9165268)
chr1 (396-461)||(31794278-31794343)
chr1 (410-459)||(52336790-52336839)
chr1 (401-453)||(24730386-24730438)
chr1 (402-461)||(15786334-15786393)
chr1 (402-461)||(36371473-36371532)
chr1 (402-455)||(40257402-40257455)
chr1 (402-461)||(2799865-2799924)
chr1 (402-461)||(19528341-19528400)
chr1 (402-461)||(41508834-41508893)
chr1 (401-455)||(17410233-17410287)
chr1 (417-463)||(44046160-44046206)
chr1 (402-455)||(4566551-4566604)
chr1 (406-455)||(51703786-51703835)
chr1 (402-470)||(8904417-8904485)
chr1 (403-455)||(17745276-17745328)
chr1 (403-470)||(19088213-19088280)
chr1 (404-455)||(21547500-21547551)
chr1 (402-461)||(51814497-51814556)
chr1 (409-455)||(6650605-6650651)
chr1 (404-470)||(37400279-37400345)
chr1 (402-455)||(50901584-50901638)
chr1 (402-463)||(16169990-16170051)
chr1 (402-455)||(25297775-25297828)
chr1 (406-455)||(52116801-52116850)
chr1 (398-442)||(2379424-2379468)
chr1 (295-375)||(9990643-9990723)
chr1 (402-461)||(18459245-18459305)
chr1 (402-454)||(44126398-44126450)
chr1 (406-461)||(6122801-6122856)
chr1 (406-461)||(10526830-10526885)
chr1 (402-453)||(15581163-15581214)
chr1 (402-453)||(21694449-21694500)
chr1 (403-470)||(24047107-24047174)
chr1 (402-453)||(39714800-39714851)
chr1 (406-461)||(42983388-42983443)
chr1 (285-375)||(25388367-25388457)
chr1 (402-455)||(8818143-8818196)
chr1 (402-455)||(12259263-12259316)
chr1 (402-455)||(16893397-16893450)
chr1 (402-455)||(21268013-21268066)
chr1 (402-455)||(30420313-30420366)
chr1 (419-456)||(31383817-31383854)
chr1 (399-455)||(9964438-9964494)
chr1 (402-450)||(39012294-39012342)
chr1 (291-383)||(39584601-39584693)
[»] scaffold0002 (1 HSPs)
scaffold0002 (402-461)||(94985-95044)
[»] scaffold0118 (1 HSPs)
scaffold0118 (402-455)||(41653-41706)
[»] scaffold0300 (1 HSPs)
scaffold0300 (407-470)||(4348-4411)
[»] scaffold0172 (1 HSPs)
scaffold0172 (402-469)||(32775-32842)
[»] scaffold0024 (1 HSPs)
scaffold0024 (296-383)||(87666-87753)
[»] scaffold0299 (1 HSPs)
scaffold0299 (405-455)||(11534-11584)
[»] scaffold0194 (1 HSPs)
scaffold0194 (403-461)||(13060-13118)
[»] scaffold0258 (1 HSPs)
scaffold0258 (402-455)||(15343-15396)
[»] scaffold1367 (1 HSPs)
scaffold1367 (405-455)||(860-910)
[»] scaffold0517 (1 HSPs)
scaffold0517 (404-470)||(7731-7797)
[»] scaffold0122 (1 HSPs)
scaffold0122 (406-455)||(6939-6988)
[»] scaffold0070 (2 HSPs)
scaffold0070 (406-455)||(42540-42589)
scaffold0070 (398-459)||(38918-38979)
[»] scaffold0021 (1 HSPs)
scaffold0021 (406-455)||(157007-157056)
[»] scaffold0238 (1 HSPs)
scaffold0238 (402-470)||(5196-5264)
[»] scaffold0086 (1 HSPs)
scaffold0086 (402-470)||(47385-47453)
[»] scaffold0063 (1 HSPs)
scaffold0063 (402-470)||(35394-35462)
[»] scaffold0337 (1 HSPs)
scaffold0337 (406-461)||(1760-1815)
[»] scaffold0180 (1 HSPs)
scaffold0180 (410-461)||(19976-20027)
[»] scaffold0065 (1 HSPs)
scaffold0065 (406-461)||(12196-12251)
[»] scaffold0032 (1 HSPs)
scaffold0032 (402-453)||(112285-112336)
[»] scaffold0009 (1 HSPs)
scaffold0009 (420-470)||(19852-19902)
[»] scaffold0056 (1 HSPs)
scaffold0056 (402-458)||(61665-61721)


Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 18 - 472
Target Start/End: Complemental strand, 45977384 - 45976926
Alignment:
Q  18 acattgtatccctgacatatctttcgcgatgagtagtttttccgttaatatatttccttactcaataaaatcgatgccataaagaactaaaatagagtct 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  45977384 acattgtatccctgacatatctttcgcgatgagtagtttttccgttaatatatttccttactcaataaaatcgatgctata--gaactaaaatagagtct 45977287  T
Q  118 tgtaagtgtcggtggccggtgggttgctagtttcatggacattggtatacannnnnnnnnnn--cgacaagcaaacatgtattatattaacactgctata 215  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||             ||||||||||| ||||||||||||||||||||||||    
T  45977286 tgtaagtgtcggtggccggtgggttgctggtttcatggacattggtatacatttttttttctttcgacaagcaaaaatgtattatattaacactgctata 45977187  T
Q  216 atagtcacctcagcataaggtttgccgnnnnnnnnnnnnnnnnnncaagcaccacaatcaaggtatcaaaagtggctatacaatgcctaaacacaataaa 315  Q
    |||||| |||||||| |||||||| ||                  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45977186 atagtctcctcagcacaaggtttgtcgaaaaaactactaaaaaaacaagcaccacaatcaaggtatcaaaagtggctatacaatgcctaaacacgataaa 45977087  T
Q  316 agactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccactacaaa----gatactttactttatggaatccacttgggt 411  Q
    ||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||     |||||||||||||||||||||||||||||    
T  45977086 agattcgaccaccaaaagtgttcaccaaatacaaagatagcctttttgactttcaaccaccacaaaaaataatactttactttatggaatccacttgggt 45976987  T
Q  412 tggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttcat 472  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45976986 tggcctagtggtattggcttgtgacctgggagtgtgctcctccttaaggttttaagttcat 45976926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 26459483 - 26459424
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||    
T  26459483 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 26459424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 25021408 - 25021355
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  25021408 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 25021355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 18363699 - 18363758
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||| |||||    
T  18363699 ccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggt 18363758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 48771941 - 48772000
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||| | |||||||||||||| ||||||||||||||||||||||| ||||    
T  48771941 ccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggt 48772000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 42836074 - 42836016
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaagg 460  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||    
T  42836074 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaagg 42836016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 401 - 457
Target Start/End: Complemental strand, 15905747 - 15905691
Alignment:
Q  401 tccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcctta 457  Q
    ||||||||||||||||| | |||||||||||| || |||||||||||||||||||||    
T  15905747 tccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcctta 15905691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 23552121 - 23552189
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||||||||||| ||||| | ||||||    
T  23552121 ccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttc 23552189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 461
Target Start/End: Complemental strand, 39499797 - 39499733
Alignment:
Q  397 ggaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||| ||||||||||||||||||||||||||||||| || ||| ||||||| ||||| |||||||    
T  39499797 ggaacccacttgggttggcctagtggtattggcttgggacctgtgagtgtgttcctctttaaggt 39499733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 17041085 - 17041026
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||| ||||||| ||||||||| ||||||| |||||||||||||| |||||    
T  17041085 ccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggt 17041026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 24513800 - 24513859
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| || |||||| ||||    
T  24513800 ccacttgggttggcctagtggtattggcttgagatttgggagtgtacttctccttgaggt 24513859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 30442491 - 30442550
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||| ||||||||||||||| || |||||||| |||||||||| |||||    
T  30442491 ccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggt 30442550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 470
Target Start/End: Complemental strand, 36803703 - 36803632
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||| ||||||||| |||||||||||| |||| || |||||||| |||||||||| || |||||||||||    
T  36803703 aatccatttgggttggtctagtggtattgacttgggacctgggagtatgctcctcctcaaagttttaagttc 36803632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 39631847 - 39631906
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||||||||||||| || ||||||||  ||||||||| |||||    
T  39631847 ccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggt 39631906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 43215187 - 43215246
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||| ||||||||||||||||| || || |||||||||||||||| |||||    
T  43215187 ccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggt 43215246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 405 - 471
Target Start/End: Original strand, 19553460 - 19553525
Alignment:
Q  405 cttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttca 471  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||| ||||| ||| |||||    
T  19553460 cttgggttggcctggtggtattggcttg-gacctgggagtgtgctcctcctcaaggtcttaggttca 19553525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 11721031 - 11720974
Alignment:
Q  404 acttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||| ||||||||| |||||||||||||| || |||||| ||||||||||||||||||    
T  11721031 acttcggttggcctggtggtattggcttgggacctgggaatgtgctcctccttaaggt 11720974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 21854551 - 21854604
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||  ||||||||||| | ||||||||||||||||||||||    
T  21854551 ccacttgggttggcctgatggtattggctagggatctgggagtgtgctcctcct 21854604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 25590614 - 25590667
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| |||  ||||||||||||| ||||||||||||||||||||||    
T  25590614 ccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcct 25590667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 41519335 - 41519278
Alignment:
Q  404 acttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||| |||| ||| | |||||||||||||||| |||||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggt 41519278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 45709777 - 45709728
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  45709777 ttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcct 45709728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 21877814 - 21877870
Alignment:
Q  405 cttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||| |||||||||||||||||| |||| || ||||||| |||||||||||||||||    
T  21877814 cttgagttggcctagtggtattgacttgggacctgggagggtgctcctccttaaggt 21877870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 22760866 - 22760925
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||| || ||||||||| |||| || ||||||||||||||||||| |||||    
T  22760866 ccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggt 22760925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 22927479 - 22927538
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||||  |||| ||||| |||||||||| ||||| |||||    
T  22927479 ccacttgggttggcctagtggtattaacttgggatctaggagtgtgcttctcctaaaggt 22927538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 23301675 - 23301616
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| ||||||||| |||| ||  ||||||||||||||||||| ||||    
T  23301675 ccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggt 23301616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 25956361 - 25956314
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    ||||||||||||||||||||||||||| || || ||||||||||||||    
T  25956361 ttgggttggcctagtggtattggcttgggaccttggagtgtgctcctc 25956314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 30579338 - 30579397
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| |||||||||||||| || |||||||||| | |||||| |||||    
T  30579338 ccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggt 30579397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 33869518 - 33869459
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||| ||||||||||| || |||| ||||||||||| || |||||    
T  33869518 ccacttgggttggcctagtagtattggcttgagacctggaagtgtgctccttctcaaggt 33869459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 37233645 - 37233586
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||| | | ||| |||||||||| ||| ||||||||||||||||||||||||    
T  37233645 ccacttgggttgacttggtgatattggcttgggatgtgggagtgtgctcctccttaaggt 37233586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 455
Target Start/End: Complemental strand, 20952227 - 20952169
Alignment:
Q  397 ggaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||| |||  ||||||||| ||| || |||||||||||||||||||    
T  20952227 ggaatccacttgggttgacctgatggtattggtttgggacctgggagtgtgctcctcct 20952169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 23595733 - 23595791
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||| || ||||||||| |||| ||||| |||||||||||||||| |||||    
T  23595733 cacttgggttggtctggtggtattgacttgagatctcggagtgtgctcctcctcaaggt 23595791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 20335904 - 20335851
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| |||| |||||||||||| ||  ||||||||||||||||||    
T  20335904 ccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcct 20335851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 43590914 - 43590963
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| |||||||||||||| ||  ||||||||||||||||||    
T  43590914 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcct 43590963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 45559203 - 45559251
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctc 450  Q
    |||||||||||||||||||||||||||||||  | || |||||||||||    
T  45559203 ccacttgggttggcctagtggtattggcttggaaccttggagtgtgctc 45559251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 5273663 - 5273604
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| ||||| |||||||| || ||  ||||||||||||||| |||||    
T  5273663 ccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggt 5273604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 5579307 - 5579248
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||| ||| ||||| |||||||| || || |||||||||||||||| |||||    
T  5579307 ccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggt 5579248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 7744185 - 7744126
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| ||||||||||||||||| |||||  ||||||||| | |||||||||| |||||    
T  7744185 ccacttaggttggcctagtggtataggcttaggatctgggactatgctcctcctcaaggt 7744126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 7801183 - 7801234
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||| ||||||| ||||||||| |||| || |||||||||||||||||    
T  7801183 ccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctc 7801234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 15137556 - 15137615
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| |||||| || |||| ||| | |||||||||||||||| |||||    
T  15137556 ccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggt 15137615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 31835195 - 31835254
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| ||||| |||||||| |  || |||||||||||||||| |||||    
T  31835195 ccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcctcaaggt 31835254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 41487365 - 41487416
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||||||||||| |||||||||||||| ||  ||||||||| ||||||    
T  41487365 ccacttgggttggcctggtggtattggcttgggacttgggagtgttctcctc 41487416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 463
Target Start/End: Original strand, 5934147 - 5934185
Alignment:
Q  425 ttggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  5934147 ttggcttgggatctgggagtgtgctcctccttgaggttt 5934185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 42711962 - 42712020
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||| |||||||||| |||||  |  |||||||||||||||||| |||||    
T  42711962 cacttgggttggcttagtggtattagcttggtacatgggagtgtgctcctcctcaaggt 42712020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 452
Target Start/End: Complemental strand, 48039720 - 48039670
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcct 452  Q
    |||||||||||||||| ||||| |||||||| ||||| ||||| |||||||    
T  48039720 ccacttgggttggcctggtggtgttggcttgcgatcttggagtatgctcct 48039670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 2446311 - 2446364
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| ||  ||||||||||||| ||  ||||||||||||||||||    
T  2446311 ccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcct 2446364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 25655301 - 25655240
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||| ||||||||  ||||||||||| |||| |||||| ||||||| ||||||| |||||||    
T  25655301 ccacctgggttggtttagtggtattgacttgggatctgtgagtgtgatcctcctcaaggttt 25655240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 35119390 - 35119439
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||||||||| |||| |||||||| || ||||| ||||    
T  35119390 ttgggttggcctagtggtattgacttgggatctgggtgtatgctcatcct 35119439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 35513473 - 35513522
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||| ||||| ||  || |||||||||||||||    
T  35513473 ttgggttggcctagtggtatttgcttgggacttgagagtgtgctcctcct 35513522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 37085618 - 37085569
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||| | |||||||||||||| ||| ||||||||||||| ||||    
T  37085618 ttgggttggcatggtggtattggcttgggatttgggagtgtgctcatcct 37085569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 4566504 - 4566476
Alignment:
Q  399 aatccacttgggttggcctagtggtattg 427  Q
    |||||||||||||||||||||||||||||    
T  4566504 aatccacttgggttggcctagtggtattg 4566476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 17113798 - 17113866
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||||| ||||||||| ||||||||||   | ||||||||||||| ||||| ||||| | ||||||    
T  17113798 ccacttggggtggcctagttgtattggcttagaacctgggagtgtgcttctcctcaaggtctcaagttc 17113866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 24046536 - 24046595
Alignment:
Q  402 ccacttgggttggcctagtggtattggc-ttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||| ||||| |||||||||| |||||| ||||||||||| ||||||| |||||    
T  24046536 ccacttgggttagcctactggtattggctttgtgacctgggagtgtg-tcctcctcaaggt 24046595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 38374672 - 38374604
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||||||||| | ||||| |||||||| || ||  ||||||||||||||| ||||| ||| ||||    
T  38374672 ccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttc 38374604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 48125247 - 48125195
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcc 454  Q
    ||||||||||||| || ||||| |||||||| || || |||||||||||||||    
T  48125247 ccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctcc 48125195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 383
Target Start/End: Original strand, 3550650 - 3550759
Alignment:
Q  274 caaggtatcaaaagtggctatacaatgcctaaacacaataaaagactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaacc 373  Q
    |||| ||| ||||||| |||| ||||| |||||||| | ||||||||||||||||| || ||||||| ||||| |||| |||||||||||||||||||||    
T  3550650 caagatataaaaagtgtctattcaatgtctaaacacgacaaaagactcgaccaccacaaatgttcaccaaatacaaagctagcctttttggctttcaacc 3550749  T
Q  374 actacaaaga 383  Q
    || |||||||    
T  3550750 accacaaaga 3550759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 12188376 - 12188308
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||| ||||||    
T  12188376 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttc 12188308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 455
Target Start/End: Complemental strand, 6776679 - 6776627
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  6776679 cacttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcct 6776627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 34293892 - 34293825
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaa 466  Q
    ||||||||||||||| |||||||||||||| |||  || |||||||||||||||||| || |||||||    
T  34293892 aatccacttgggttgacctagtggtattggtttggaatttgggagtgtgctcctcctcaaagttttaa 34293825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 33549107 - 33549160
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| || |||||||||||||| || |||||||||||||||||||    
T  33549107 ccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcct 33549160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 1056758 - 1056690
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||||||| ||||||||||||||| || ||  ||||||| ||||| |||| ||||||||||||||    
T  1056758 ccacttgggttgacctagtggtattggcctgggacttgggagtatgctcatcctcaaggttttaagttc 1056690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 30127403 - 30127454
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    ||||||||||||| || |||||||||||||| | ||||||||||||||||||    
T  30127403 ccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctc 30127454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 10338246 - 10338188
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||| | |||||||||||||| || || |||||||||||||||| |||||    
T  10338246 cacttgggttggcatggtggtattggcttgggacctaggagtgtgctcctcctcaaggt 10338188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 452
Target Start/End: Complemental strand, 32613213 - 32613163
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcct 452  Q
    |||||||||||||||| ||||||||| |||| | |||||||||||||||||    
T  32613213 ccacttgggttggcctggtggtattgacttggggtctgggagtgtgctcct 32613163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 13227231 - 13227178
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||  ||||||||||  || ||||||||||||||||||||||    
T  13227231 ccacttgggttggccatgtggtattggtatgagatctgggagtgtgctcctcct 13227178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 21418477 - 21418526
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| |||||||||||||| ||  ||||||||||||||||||    
T  21418477 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcct 21418526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 24641259 - 24641210
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||| | ||||||||| |||| ||||||||||||||||||||||    
T  24641259 ttgggttggcttggtggtattgacttgggatctgggagtgtgctcctcct 24641210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 31623064 - 31623011
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| |  |||||||||||||| || |||||||||||||||||||    
T  31623064 ccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcct 31623011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 3779342 - 3779401
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| ||||| |||||||||||||||||| ||  ||||||||||||||| || |||||    
T  3779342 ccacttaggttgacctagtggtattggcttgagacttgggagtgtgctccttctcaaggt 3779401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 450
Target Start/End: Original strand, 13441050 - 13441101
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctc 450  Q
    |||||||||||||||| |  |||||||||||||| || ||||||||||||||    
T  13441050 aatccacttgggttggtcgggtggtattggcttgggacctgggagtgtgctc 13441101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Complemental strand, 24507605 - 24507550
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||| |||||||| || || ||||| |||||||||| |||||    
T  24507605 ttgggttggcctagtggtgttggcttgggaccttggagtttgctcctcctcaaggt 24507550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 461
Target Start/End: Original strand, 28363948 - 28363999
Alignment:
Q  410 gttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| |||||||||||| ||| |||||| ||||||||||||||| |||||    
T  28363948 gttggcatagtggtattggtttgggatctgcgagtgtgctcctcctcaaggt 28363999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 381
Target Start/End: Complemental strand, 31746541 - 31746443
Alignment:
Q  283 aaaagtggctatacaatgcctaaacacaataaaagactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccactacaaa 381  Q
    ||||||||||   |||| ||||||||| | ||  |||||||||||||  | |||||| |||||| ||||||| |||||||  |||||||||| ||||||    
T  31746541 aaaagtggctggccaatacctaaacacgacaattgactcgaccaccacgaatgttcattaaatacaaagataacctttttatctttcaaccattacaaa 31746443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 6758495 - 6758446
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcc 451  Q
    ||||||| |||||||| |||||||||||||  ||| ||||||||||||||    
T  6758495 ccacttgtgttggcctggtggtattggcttaggatttgggagtgtgctcc 6758446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 12234580 - 12234531
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcc 451  Q
    |||||| ||||||||| ||||||||| |||| || |||||||||||||||    
T  12234580 ccacttaggttggcctggtggtattgacttgggacctgggagtgtgctcc 12234531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 14557965 - 14558018
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| || ||||| |||||||| || |||| ||||||||||||||    
T  14557965 ccacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcctcct 14558018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 22744 - 22696
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctc 450  Q
    ||||||||||||| |||||||| |||||||| || || |||||||||||    
T  22744 ccacttgggttgggctagtggttttggcttgggaccttggagtgtgctc 22696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 439
Target Start/End: Complemental strand, 6663185 - 6663149
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctg 439  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  6663185 cacttgggttggcatagtggtattggcttgagatctg 6663149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 8809828 - 8809764
Alignment:
Q  317 gactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccactacaaa 381  Q
    ||||||||||||| || ||||||| ||||| |||| |  ||||||| |||||||||||| |||||    
T  8809828 gactcgaccaccacaaatgttcaccaaatacaaagctttccttttttgctttcaaccaccacaaa 8809764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 463
Target Start/End: Complemental strand, 27989729 - 27989669
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    ||||||| |||||||||||||||| |||||  |  ||||||| ||||||| ||||||||||    
T  27989729 cacttggattggcctagtggtattagcttggaacttgggagtatgctccttcttaaggttt 27989669  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 470
Target Start/End: Complemental strand, 32201954 - 32201890
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||| | | |||||||||||||| |||||  |||||||||||||||| | |||| ||||||    
T  32201954 ttgggttgacttggtggtattggcttgggatctcagagtgtgctcctcctttaagtttcaagttc 32201890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 46518631 - 46518692
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  46518631 ccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggttt 46518692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 465
Target Start/End: Complemental strand, 31789043 - 31788980
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggtttta 465  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||    
T  31789043 ccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggtttta 31788980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 4222144 - 4222197
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  4222144 ccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcct 4222197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 455
Target Start/End: Complemental strand, 28928955 - 28928899
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||    
T  28928955 aatccacttggattggcctagtggtattggcttgggatctgagagtgtgctcctcct 28928899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 5499480 - 5499421
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| ||||||||| |||| |||||| |||||||||||||||||||||    
T  5499480 ccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggt 5499421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 30311309 - 30311368
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||||||||| |||||    
T  30311309 ccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggt 30311368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 53412948 - 53413007
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggt 53413007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 203093 - 203154
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||  ||||||||||||    
T  203093 ccacttgggttggcctagtggtattgacttgggatcagggagtgtgcttttccttaaggttt 203154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 31520678 - 31520625
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  31520678 ccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcct 31520625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 461
Target Start/End: Original strand, 7975428 - 7975480
Alignment:
Q  409 ggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||| |||||    
T  7975428 ggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggt 7975480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 10499182 - 10499123
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||| ||||    
T  10499182 ccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggt 10499123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 27093434 - 27093375
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||||||||||  |  |||||||||||||||||| |||||    
T  27093434 ccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggt 27093375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 2667869 - 2667918
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  2667869 ttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcct 2667918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 16354965 - 16354912
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||||||||||||||||||  | ||| |||||||||||||||    
T  16354965 ccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcct 16354912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 26988999 - 26989051
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||||||||||    
T  26988999 ccacttgggttggcctagtggtattggcttg-gatctgagagtttgctcctcct 26989051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 410 - 455
Target Start/End: Complemental strand, 32651503 - 32651458
Alignment:
Q  410 gttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||| || |||||||||||||||||||    
T  32651503 gttggcctagtggtattggcttgggacctgggagtgtgctcctcct 32651458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 36720384 - 36720437
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| || |||||||||||||| ||| ||||||||||||||||||    
T  36720384 ccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcct 36720437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 47454690 - 47454637
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||  ||||||||||||||||| ||||| ||||||||||||||||    
T  47454690 ccacttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcct 47454637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 40063622 - 40063690
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||||||| | |||| ||||||||||| |||||| |||| |||||||||||||||| | ||||||    
T  40063622 ccacttgggttgacttagtagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttc 40063690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 14186651 - 14186709
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||||| |||| || || |||||||||||||||| |||||    
T  14186651 ccacttgggttggcctagtggtattgtcttgggacct-ggagtgtgctcctcctcaaggt 14186709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 15048134 - 15048075
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||| || |||||| |||||| ||||||||| |||||||||||| |||||    
T  15048134 ccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggt 15048075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 10445213 - 10445159
Alignment:
Q  402 ccacttgggttggcctagtggta-ttggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||| | |||||||| || |||||||||||||||||||    
T  10445213 ccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcct 10445159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 461
Target Start/End: Original strand, 11612307 - 11612361
Alignment:
Q  407 tgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||| ||||||||  |||| || |||||||||||||||||||||||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctccttaaggt 11612361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 4844580 - 4844531
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||| || ||||||||| |||| ||||||||||||||||||||||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcct 4844531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 4870276 - 4870227
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||| || ||||||||| |||| ||||||||||||||||||||||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcct 4870227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 8075196 - 8075139
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||||||| ||||||||||| |||||| ||  |||||||||||||||||| |||||||    
T  8075196 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggttt 8075139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 14339617 - 14339666
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||| ||||||| |||||||||||||| ||| ||||||||||||||||||    
T  14339617 ttggattggcctggtggtattggcttgggatttgggagtgtgctcctcct 14339666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 51903951 - 51903898
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||| ||||||| |||  ||||||||||||| ||||||||||||||||||||||    
T  51903951 ccacctgggttgacctgttggtattggcttgggatctgggagtgtgctcctcct 51903898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 10969970 - 10969938
Alignment:
Q  399 aatccacttgggttggcctagtggtattggctt 431  Q
    |||||||||||||||||||||||||||||||||    
T  10969970 aatccacttgggttggcctagtggtattggctt 10969938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 446
Target Start/End: Original strand, 16991549 - 16991589
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgt 446  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  16991549 ttgggttggcctggtggtattggcttgggatctgggagtgt 16991589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 461
Target Start/End: Complemental strand, 47279458 - 47279418
Alignment:
Q  421 ggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  47279458 ggtatttgcttgggatctgggagtgtgctcctccttaaggt 47279418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 2597293 - 2597234
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||| || |||||||||||||  ||| | ||||||||||||||||| ||||    
T  2597293 ccacttgggttggtctggtggtattggcttcggatttaggagtgtgctcctccttgaggt 2597234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Original strand, 8170679 - 8170734
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||||||  |  ||||||||||||||| || |||||    
T  8170679 ttgggttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggt 8170734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Original strand, 19154638 - 19154693
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||| ||||||||||| |  ||| ||||||||||||||| |||||    
T  19154638 ttgggttggcctagttgtattggcttgaggcctgagagtgtgctcctcctaaaggt 19154693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 28703477 - 28703426
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    ||||||||||||| | |||| |||| ||||| ||||||||||||||||||||    
T  28703477 ccacttgggttggtccagtgatattagcttgggatctgggagtgtgctcctc 28703426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 37788538 - 37788479
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||| |||||||||| ||||  | || |||||||||||||||| |||||    
T  37788538 ccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggt 37788479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 42799820 - 42799769
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||||||||||| ||||| |||||||| || || ||||||||||||||    
T  42799820 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 42799769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 455
Target Start/End: Complemental strand, 27923121 - 27923063
Alignment:
Q  397 ggaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||| |||||| ||||||||| |||||||||||||| ||  ||| ||||||||||||||    
T  27923121 ggaacccacttaggttggcctggtggtattggcttgggacatggaagtgtgctcctcct 27923063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 8051217 - 8051270
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||| |||||||||||||| || |||| ||| |||| |||||    
T  8051217 ccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcct 8051270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 16213045 - 16212976
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttca 471  Q
    ||||||||||||| ||| || | ||| |||| ||  |||||||||||||||||||||||| | |||||||    
T  16213045 ccacttgggttggtctaatgatgttgccttgagacttgggagtgtgctcctccttaaggtctcaagttca 16212976  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 30232333 - 30232386
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| ||| |||||||||| ||| ||||||| | ||||||||||||    
T  30232333 ccacttgggttgccctggtggtattggtttgcgatctggaactgtgctcctcct 30232386  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 2709387 - 2709443
Alignment:
Q  409 ggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggtttta 465  Q
    |||||||||||||||||||  ||| ||||||| ||| ||||||||||  ||||||||    
T  2709387 ggttggcctagtggtattgtgttgggatctggaagtatgctcctcctcgaggtttta 2709443  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 455
Target Start/End: Complemental strand, 13808961 - 13808905
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||| || ||  ||||| |||| ||||||| ||||||||||||||    
T  13808961 aatccacttgggttggtctggtcttattgacttgggatctggcagtgtgctcctcct 13808905  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 26481930 - 26481998
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||||||| || | |||||| ||||||| || ||| ||||||||||||||| || |||||| ||||    
T  26481930 ccacttgggttagcttggtggtaatggcttgggacctgagagtgtgctcctcctcaaagttttaggttc 26481998  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 34062623 - 34062575
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctc 450  Q
    ||||||||||||||| |||| ||||||||||  || |||||||||||||    
T  34062623 ccacttgggttggcccagtgatattggcttgaaatttgggagtgtgctc 34062575  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 455
Target Start/End: Complemental strand, 49494218 - 49494166
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||| |||||||||||||| ||||  || ||||||||||||| ||||    
T  49494218 cacttgggttagcctagtggtattgacttgaaatttgggagtgtgctcttcct 49494166  T

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Target: chr5 (Bit Score: 49; Significance: 8e-19; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 402 - 458
Target Start/End: Complemental strand, 21549210 - 21549154
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaa 458  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  21549210 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaa 21549154  T

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Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 29075784 - 29075837
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  29075784 ccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcct 29075837  T

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Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 30883271 - 30883202
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttca 471  Q
    ||||||||||||| ||||||||||||||||| || ||||||||||||||||||| ||||| | |||||||    
T  30883271 ccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttca 30883202  T

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Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 30109381 - 30109322
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||||    
T  30109381 ccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggt 30109322  T

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Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 34984809 - 34984877
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||||||||| |||||||||||||||||  | ||||||||||||||||||| ||||| ||| ||||    
T  34984809 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttc 34984877  T

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Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 87496 - 87437
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| ||||||||||||||||||| ||||  ||||||||||||||||||||| |||||    
T  87496 ccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggt 87437  T

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Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 456
Target Start/End: Complemental strand, 22020932 - 22020881
Alignment:
Q  405 cttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcctt 456  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  22020932 cttgggttggcatagtggtattagcttgggatctgggagtgtgctcctcctt 22020881  T

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Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 25627060 - 25627119
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||||||||||  |  |||||||||||||||||| |||||    
T  25627060 ccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggt 25627119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 26598527 - 26598578
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  26598527 ccacttggattggcctagtggtattggcttgggatctgagagtgtgctcctc 26598578  T

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Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 16436622 - 16436679
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||||||||| || || |||||||||||||||| |||||    
T  16436622 cacttgggttggcctagtggtattggcttggga-cttggagtgtgctcctcctcaaggt 16436679  T

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Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 383
Target Start/End: Complemental strand, 28449334 - 28449225
Alignment:
Q  274 caaggtatcaaaagtggctatacaatgcctaaacacaataaaagactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaacc 373  Q
    |||||||  |||||||| ||  |||||||||||||| | ||  | ||||||||||| || | ||||| ||||| |||||||| |||||||||||||||||    
T  28449334 caaggtacaaaaagtggttagtcaatgcctaaacacgacaatgggctcgaccaccacaaatattcaccaaatacaaagatagtctttttggctttcaacc 28449235  T
Q  374 actacaaaga 383  Q
    |  |||||||    
T  28449234 atcacaaaga 28449225  T

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Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 7918542 - 7918474
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||||||||||||||||||||||||||  | |||||||||  |||||||| ||||| ||| ||||    
T  7918542 ccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttc 7918474  T

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Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 18596074 - 18596006
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||| |||  |||||||||||||||||||| |||||| |||||||||||| ||||| ||| ||||    
T  18596074 ccacttggattgatctagtggtattggcttgtgacctgggaatgtgctcctcctcaaggtcttaggttc 18596006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 459
Target Start/End: Complemental strand, 43230849 - 43230790
Alignment:
Q  402 ccacttgggttggcctagtggtat--tggcttgtgatctgggagtgtgctcctccttaag 459  Q
    ||||||||||||||||||||||||  ||||||| | |||| |||||||||||||||||||    
T  43230849 ccacttgggttggcctagtggtatattggcttgggttctgagagtgtgctcctccttaag 43230790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 14285164 - 14285223
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||| ||||| |||||||||  | ||||||||||||||||||| |||||    
T  14285164 ccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggt 14285223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 16457813 - 16457872
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| ||||||||| |||||||||||||| || || |||||||||||||||| |||||    
T  16457813 ccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggt 16457872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 461
Target Start/End: Original strand, 43442207 - 43442258
Alignment:
Q  410 gttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| |||||||||||| ||| |||||||||||||||||||||| |||||    
T  43442207 gttggcatagtggtattggtttgagatctgggagtgtgctcctcctcaaggt 43442258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 455
Target Start/End: Original strand, 21589286 - 21589344
Alignment:
Q  397 ggaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||| |||||||||||||||| |||||||||||||| || |||||||| |||| |||||    
T  21589286 ggaacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcct 21589344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 14495874 - 14495825
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||| || ||||||||| |||| ||||||||||||||||||||||    
T  14495874 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcct 14495825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 29692455 - 29692406
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||| || |||||||||| ||| ||||||||||||||||||||||    
T  29692455 ttgggttggtctggtggtattggattgggatctgggagtgtgctcctcct 29692406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 22737085 - 22737137
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcc 454  Q
    ||||||||||||| ||||||||||||||||| ||  ||| |||||||||||||    
T  22737085 ccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctcc 22737137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Complemental strand, 892543 - 892488
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||||||||| || ||  |||||| |||||||| |||||    
T  892543 ttgggttggcctagtggtattggcttgggacctcagagtgtactcctcctcaaggt 892488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 455
Target Start/End: Original strand, 16773804 - 16773863
Alignment:
Q  396 tggaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||| ||||||| ||||| || ||||||||| |||| || |||||||||||||||||||    
T  16773804 tggaacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcct 16773863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 17028337 - 17028278
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||| |||||| ||||||| ||| ||  |||||||||||||||||| |||||    
T  17028337 ccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggt 17028278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 37258429 - 37258378
Alignment:
Q  412 tggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||| |||||||||| ||||| ||||| |||||||||||||||| |||||||    
T  37258429 tggcttagtggtattagcttgggatctaggagtgtgctcctcctcaaggttt 37258378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 43241754 - 43241696
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||| |||||||||||| |||| ||||| ||||||||| | ||||| ||||    
T  43241754 cacttgggttggtctagtggtattgacttgggatcttggagtgtgcccttccttgaggt 43241696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 1410728 - 1410679
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||| || ||||||||| |||| ||| ||||||||||||||||||    
T  1410728 ttgggttggtctggtggtattgacttgggatatgggagtgtgctcctcct 1410679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 8278348 - 8278295
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| ||  ||||||||||||| ||  ||||||||||||||||||    
T  8278348 ccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcct 8278295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 452
Target Start/End: Complemental strand, 14804746 - 14804693
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcct 452  Q
    ||||||||||||||||||||||| |||||| ||| ||| || ||||||| ||||    
T  14804746 aatccacttgggttggcctagtgttattggtttgggatttgtgagtgtgttcct 14804693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 17761410 - 17761365
Alignment:
Q  420 tggtattggcttgtgatctgggagtgtgctcctccttaaggtttta 465  Q
    |||||| |||||| ||||||||||||||||||||||| | ||||||    
T  17761410 tggtatcggcttgggatctgggagtgtgctcctccttgaagtttta 17761365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 455
Target Start/End: Original strand, 18437084 - 18437141
Alignment:
Q  398 gaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||| ||||||||||||||||||  |||| ||  || |||||||||||||||    
T  18437084 gaatccacttaggttggcctagtggtattaacttgggacttgagagtgtgctcctcct 18437141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 30735143 - 30735090
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| |||||| |||||| ||||| | ||| |||||||||||||||    
T  30735143 ccacttgggttgacctagtcgtattgacttgtaacctgagagtgtgctcctcct 30735090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 84851 - 84895
Alignment:
Q  426 tggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||| |||||||||||||||||||||| ||||| | ||||||    
T  84851 tggcttgggatctgggagtgtgctcctcctcaaggtctcaagttc 84895  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 28449410 - 28449370
Alignment:
Q  196 attatattaacactgctataatagtcacctcagcataaggt 236  Q
    ||||||||||||||| ||||| |||| ||||||||||||||    
T  28449410 attatattaacactgatataacagtctcctcagcataaggt 28449370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 8e-19; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 461
Target Start/End: Complemental strand, 42327473 - 42327409
Alignment:
Q  397 ggaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||    
T  42327473 ggaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 42327409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 16918651 - 16918592
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||    
T  16918651 ccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggt 16918592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 455
Target Start/End: Original strand, 42922409 - 42922470
Alignment:
Q  394 tatggaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||| |||||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  42922409 tatggaacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcct 42922470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 29503274 - 29503333
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||||||||| |||||    
T  29503274 ccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggt 29503333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 42602557 - 42602616
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||| || |||||    
T  42602557 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggt 42602616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 3001383 - 3001436
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcctt 456  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  3001383 cacttgggttggcctagtggtattgacttgagatctaggagtgtgctcctcctt 3001436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 16381727 - 16381666
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||||||||||||||||||||||| |||||| |||||| |||||| |||||||| |||||||    
T  16381727 ccacttgggttggcctagtggtataggcttgggatctgagagtgttctcctcctcaaggttt 16381666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 34041661 - 34041602
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||||| |||||    
T  34041661 ccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggt 34041602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 37480078 - 37480137
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| |||||||||||||| || ||| ||||||||||||||| |||||    
T  37480078 ccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggt 37480137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 40416463 - 40416404
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||||| ||||  | |||||||| ||||||||||||||||    
T  40416463 ccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggt 40416404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 1729819 - 1729872
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| ||||||||||||||||| ||  ||||||||||||||||||    
T  1729819 ccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcct 1729872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 470
Target Start/End: Complemental strand, 12994446 - 12994381
Alignment:
Q  405 cttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||| ||||| |||||||||||| |||| || ||||||||||||||||||||||||| | ||||||    
T  12994446 cttgagttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttc 12994381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 14500280 - 14500333
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||| |||||||||||||||  ||||| ||||||||||||||||||||||    
T  14500280 ccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcctcct 14500333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 37532807 - 37532742
Alignment:
Q  318 actcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccactacaaaga 383  Q
    |||||||||||| || ||||||| ||||| |||||||| |||||||| |||||||||| |||||||    
T  37532807 actcgaccaccacaaatgttcaccaaatacaaagatagtctttttggttttcaaccaccacaaaga 37532742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 455
Target Start/End: Complemental strand, 33962860 - 33962804
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||||||| || |||||| ||| || |||||||||||||||||||    
T  33962860 aatccacttgggttggcctaatgatattggtttgggaactgggagtgtgctcctcct 33962804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 4439052 - 4438993
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||| |||||||  |||| |||||| ||||||||||||||| |||||    
T  4439052 ccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaaggt 4438993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 5147752 - 5147693
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||| |||||||||||| |||| ||||||||||| ||||||| || |||||    
T  5147752 ccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggt 5147693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 7799108 - 7799055
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| ||| |||||||||||||| ||  ||||||||||||||||||    
T  7799108 ccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcct 7799055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 39714995 - 39715048
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||| | ||||||||| |||| || |||||||||||||||||||    
T  39714995 ccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcct 39715048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 1435067 - 1435126
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||| |||||||| ||||||| ||| | |||||||||| ||||| |||||    
T  1435067 ccacttgggttggcatagtggtactggcttgggatttaggagtgtgcttctcctcaaggt 1435126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 11062363 - 11062422
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||| ||||||||||  |  |||||||||||| ||||| |||||    
T  11062363 ccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggt 11062422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 11251090 - 11251149
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| ||||||| |||||||||||||||| ||  ||| |||||||||||||| |||||    
T  11251090 ccacttaggttggcttagtggtattggcttgggacttggaagtgtgctcctcctcaaggt 11251149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 461
Target Start/End: Complemental strand, 12086194 - 12086143
Alignment:
Q  410 gttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||| |||||||||||||| || |||| |||||||||||||| |||||    
T  12086194 gttggcctggtggtattggcttgggacctggaagtgtgctcctcctcaaggt 12086143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 19322771 - 19322822
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    ||||||||||||  ||||||||||||| ||| || |||||||||||||||||    
T  19322771 ccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctc 19322822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 23052596 - 23052537
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| ||||||||| |||||||||||||| ||  |||||||||||| ||||| |||||    
T  23052596 ccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggt 23052537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 30359657 - 30359716
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||| | ||||| |||||||| || || |||||||||||||||| |||||    
T  30359657 ccacttgggttggcttggtggtgttggcttgggaccttggagtgtgctcctcctcaaggt 30359716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 6859380 - 6859334
Alignment:
Q  407 tgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    ||||||||| ||||| ||||| |||||||| ||||||||||||||||    
T  6859380 tgggttggcatagtgatattgacttgtgatatgggagtgtgctcctc 6859334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 405 - 455
Target Start/End: Complemental strand, 12982566 - 12982516
Alignment:
Q  405 cttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||||||||||| ||| || |||  ||||||||||||||    
T  12982566 cttgggttggcctagtggtattggattgagacctgcaagtgtgctcctcct 12982516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 461
Target Start/End: Original strand, 21213777 - 21213831
Alignment:
Q  407 tgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||| || |||||||||||||| || ||||||||||| |||||||| ||||    
T  21213777 tgggttggtctggtggtattggcttgggacctgggagtgtgttcctccttgaggt 21213831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 456
Target Start/End: Complemental strand, 29197449 - 29197395
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcctt 456  Q
    |||||||||||||| | ||||||||| |||| ||  |||||||||||||||||||    
T  29197449 ccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctcctt 29197395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 452
Target Start/End: Complemental strand, 37756044 - 37755994
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcct 452  Q
    |||||||||||||| | |||||||||||||| || |||||| |||||||||    
T  37756044 ccacttgggttggcttggtggtattggcttgggacctgggaatgtgctcct 37755994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 4060287 - 4060234
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||||||| |||  | ||| ||||||||| |||||    
T  4060287 ccacttgggttggcctagtggtattggtttgaaacctgagagtgtgcttctcct 4060234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 456
Target Start/End: Complemental strand, 7667545 - 7667488
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcctt 456  Q
    |||||||||||||||| |  ||| |||||||||| ||  |||||||||||||||||||    
T  7667545 aatccacttgggttggtcgggtgatattggcttgggacttgggagtgtgctcctcctt 7667488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 455
Target Start/End: Original strand, 18259741 - 18259786
Alignment:
Q  410 gttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||| |||||||||||||| ||| || |||||||||||||||    
T  18259741 gttggcctggtggtattggcttgagatttgagagtgtgctcctcct 18259786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 19016034 - 19016087
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| ||  ||||||||||||| ||  ||||||||||||||||||    
T  19016034 ccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcct 19016087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 24191842 - 24191895
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcctt 456  Q
    |||||| ||||||||  ||||||||||||| || ||| ||||||||||||||||    
T  24191842 cacttgagttggcctgatggtattggcttgggacctgagagtgtgctcctcctt 24191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 28846694 - 28846747
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||| |||||  |||||||||||| |||| || |||||||||||||||||||    
T  28846694 ccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcct 28846747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 342398 - 342442
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgt 446  Q
    |||||||||||||||| ||||| ||||||||||| || |||||||    
T  342398 ccacttgggttggcctggtggtgttggcttgtgaccttggagtgt 342442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 455
Target Start/End: Original strand, 2311721 - 2311777
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||| ||||| | |  ||||||||||||| ||||||||||||| ||||||||    
T  2311721 aatccacttaggttgacttgttggtattggcttgagatctgggagtgtactcctcct 2311777  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 7415995 - 7416059
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||||||||||||||  |||||||||||| ||||| |||||  |||||| |||| || |||||||    
T  7415995 aatccacttgggttgatctagtggtattgacttgtaatctgtaagtgtgttccttctcaaggttt 7416059  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 463
Target Start/End: Original strand, 10449046 - 10449086
Alignment:
Q  423 tattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    ||||| |||||||||| |||||||||||||||| |||||||    
T  10449046 tattgacttgtgatctaggagtgtgctcctcctcaaggttt 10449086  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 455
Target Start/End: Original strand, 12801293 - 12801345
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||| ||||||||||||||||| | ||| |||||||| || ||||||||||    
T  12801293 cacttgagttggcctagtggtattagtttgggatctgggggtatgctcctcct 12801345  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 470
Target Start/End: Complemental strand, 13519129 - 13519057
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatct-gggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||| ||||||||||||||||||||||| |||  || | ||| |||||||||||||| |||| | ||||||    
T  13519129 aatccatttgggttggcctagtggtattggtttggaatttggggggtgtgctcctccttgaggtctcaagttc 13519057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 461
Target Start/End: Complemental strand, 17737682 - 17737638
Alignment:
Q  417 tagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||| ||||||  |||||||||||||||||| |||||    
T  17737682 tagtggtattggtttgtgacttgggagtgtgctcctcctcaaggt 17737638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 19244112 - 19244164
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcc 454  Q
    ||||||||||||| ||| |||||||| |||| || ||| ||||||||||||||    
T  19244112 ccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 19244164  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 455
Target Start/End: Original strand, 29964815 - 29964871
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||| |||||||| ||||||||||||||||||  | |||||||  ||||||||||    
T  29964815 aatccatttgggttgacctagtggtattggcttgaaacctgggagcatgctcctcct 29964871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 41908711 - 41908643
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||||||||||| ||||| | || ||| || || |||||||||||||||| ||||| | ||||||    
T  41908711 ccacttgggttggcctggtggtgtcggtttgagaccttggagtgtgctcctcctcaaggtctcaagttc 41908643  T

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Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 375
Target Start/End: Complemental strand, 44029764 - 44029680
Alignment:
Q  291 ctatacaatgcctaaacacaataaaagactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccac 375  Q
    |||| ||||||||||| || | |||  ||| |||||||| | |||||||||||| | ||| ||| ||||||||||||||| ||||    
T  44029764 ctatccaatgcctaaatacgacaaattactagaccaccacatgtgttcactaaaaacaaacataacctttttggctttcagccac 44029680  T

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Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 2203495 - 2203554
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||    
T  2203495 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 2203554  T

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Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 6569844 - 6569783
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  6569844 ccacttaggttggcctagtgatattggcttgggatctgggagtgtgctcctcctttaggttt 6569783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 16852343 - 16852396
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  16852343 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 16852396  T

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Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 3624583 - 3624634
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  3624583 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 3624634  T

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Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 19703560 - 19703501
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||||||||| |||||    
T  19703560 ccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggt 19703501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 30483957 - 30483904
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  30483957 ccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcct 30483904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 20994531 - 20994479
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcc 454  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  20994531 ccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctcc 20994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 18540301 - 18540360
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||||||||||||| || |||||||||| || ||||| |||||    
T  18540301 ccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggt 18540360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 28783063 - 28783122
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||| | |||||||||||||| || ||||||||||||||||||| |||||    
T  28783063 ccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggt 28783122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 44780187 - 44780128
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||| ||||||||| ||  |||||||||||||||||| |||||    
T  44780187 ccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggt 44780128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 399 - 461
Target Start/End: Complemental strand, 35690140 - 35690078
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| ||| ||||||||||||||||||||||| |||||||| || |||||||||| |||||    
T  35690140 aatccatttgtgttggcctagtggtattggcttgggatctgggtgtttgctcctcctcaaggt 35690078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 968365 - 968418
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||| |||||||| |||||||||||||| || |||||||||||||||||||    
T  968365 ccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcct 968418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 5264547 - 5264600
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||||||||||||||||||  | |||||| ||||||||||||    
T  5264547 ccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcct 5264600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 12988431 - 12988492
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||||||| ||||||||||||||||||||||  | |||| |||||||||||||| |||||||    
T  12988431 ccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctcctcaaggttt 12988492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 35826318 - 35826375
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    ||||||||||||||||||| ||||||| || ||| |||||||||||||||||| ||||    
T  35826318 ttgggttggcctagtggtagtggcttgagacctgtgagtgtgctcctccttaaagttt 35826375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 3826850 - 3826798
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcc 454  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||||||    
T  3826850 ccacttgggttggcctagtggtattggcttgccatttgagagtgtgctcctcc 3826798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 458
Target Start/End: Original strand, 7286210 - 7286266
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaa 458  Q
    |||||| ||||| |||||||||||||| ||| |||||||||||||||||||| ||||    
T  7286210 ccacttaggttgacctagtggtattggtttgggatctgggagtgtgctcctctttaa 7286266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 23361722 - 23361663
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||| ||| ||||||||| |||| ||| |||||||||||||||||| |||||    
T  23361722 ccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggt 23361663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 26688868 - 26688927
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| ||||| |||||||| || || |||||||||||||||| |||||    
T  26688868 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggt 26688927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 452
Target Start/End: Original strand, 14254730 - 14254780
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcct 452  Q
    |||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  14254730 ccacttgggttgacctagttgtattggtttgagatctgggagtgtgctcct 14254780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 456
Target Start/End: Original strand, 29431014 - 29431068
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcctt 456  Q
    |||||||||||||||| | |||||||||||| ||  |||||||||||||||||||    
T  29431014 ccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctcctt 29431068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 461
Target Start/End: Original strand, 36205195 - 36205257
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| ||  || |||||| ||| |||||||||||||||||||||| |||||    
T  36205195 aatccacttgggttggtctgatgttattggtttgagatctgggagtgtgctcctcctcaaggt 36205257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 23874455 - 23874402
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||||||||||| || |||||| | ||| ||||||    
T  23874455 ccacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcct 23874402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 29858122 - 29858069
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||| ||||||| |||||||||||||| || | |||||||||||||||||    
T  29858122 ccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcct 29858069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 35641974 - 35641921
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| || ||||||| |||||| ||| ||||||||||||||||||    
T  35641974 ccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcct 35641921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 6530810 - 6530861
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||||||||||| ||||| |||||||| || || ||||||||||||||    
T  6530810 ccacttgggttggcctggtggtgttggcttgggacctaggagtgtgctcctc 6530861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 8485002 - 8485053
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||||||||||| |||||||| ||||| || ||| |||||||||||||    
T  8485002 ccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctc 8485053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 452
Target Start/End: Complemental strand, 11492147 - 11492096
Alignment:
Q  401 tccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcct 452  Q
    ||||||||||||||| |   |||||||||||| |||||||||||||||||||    
T  11492147 tccacttgggttggcatgtcggtattggcttgagatctgggagtgtgctcct 11492096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Original strand, 11819783 - 11819838
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||| ||||||||||| |||||| ||  |||||||||||||||||| |||||    
T  11819783 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggt 11819838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 18897169 - 18897228
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||| |||| ||| || ||  ||||||||||||||| |||||    
T  18897169 ccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggt 18897228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 35287719 - 35287778
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||| ||||| ||||| |||||||| ||| | |||||||||||||||| |||||    
T  35287719 ccacttgggtaggcctggtggtgttggcttgagattttggagtgtgctcctcctcaaggt 35287778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 4830490 - 4830543
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||| |||||||| | ||| |||||| ||||||| |||||||    
T  4830490 ccacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcct 4830543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 5801050 - 5801099
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcc 451  Q
    |||||||||||| ||| |||||||| ||||| ||||| ||||||||||||    
T  5801050 ccacttgggttgacctggtggtattagcttgggatctaggagtgtgctcc 5801099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 6436633 - 6436576
Alignment:
Q  397 ggaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcc 454  Q
    |||| |||||||||||| ||| |||||||||||||| ||  | |||||||||||||||    
T  6436633 ggaacccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctcc 6436576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 8794418 - 8794365
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||| ||||| ||||||||||||||||  | |||| ||||||||||||||    
T  8794418 ccacttggattggcatagtggtattggcttggaacctggaagtgtgctcctcct 8794365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 9445430 - 9445345
Alignment:
Q  296 caatgcctaaacacaataaaagactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccactacaaa 381  Q
    |||||||||||||| | ||  ||||||||||||| || ||||||| ||| | ||||| |  ||| ||||||||||||||| |||||    
T  9445430 caatgcctaaacacgacaatggactcgaccaccacaattgttcacaaaaaacaaagacaatcttattggctttcaaccaccacaaa 9445345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 6536538 - 6536582
Alignment:
Q  417 tagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| || || |||||||||||||||| |||||    
T  6536538 tagtggtattggcttgggacctaggagtgtgctcctcctcaaggt 6536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 7140729 - 7140765
Alignment:
Q  419 gtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||| |||||||| |||||||||||||    
T  7140729 gtggtattggcttgggatctgggtgtgtgctcctcct 7140765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 22269006 - 22268958
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctc 450  Q
    |||||||||||||||| ||||| |||||||| || || |||||||||||    
T  22269006 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctc 22268958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 37109424 - 37109365
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||    
T  37109424 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 37109365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 27965583 - 27965537
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgc 448  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  27965583 ccacttgggttggcctagtggtattggcttgggatctgggagtgtgc 27965537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 46545714 - 46545767
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||||||||||| || ||| |||||||||||||||    
T  46545714 ccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcct 46545767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 51250595 - 51250546
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcc 451  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  51250595 ccacttgggttggcctggtggtattggcttgggatctgggagtgtgctcc 51250546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 471
Target Start/End: Original strand, 13901746 - 13901814
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttca 471  Q
    |||||||||||| ||||||||||||||||| || ||||||||||| |||||||| |||| | |||||||    
T  13901746 cacttgggttggtctagtggtattggcttgagacctgggagtgtgttcctccttgaggtctcaagttca 13901814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 37443705 - 37443756
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  37443705 ccacttgggttgacctagtggtattggcttgggatctgggagtgtactcctc 37443756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 461
Target Start/End: Original strand, 38869783 - 38869830
Alignment:
Q  414 gcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  38869783 gcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggt 38869830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 402 - 452
Target Start/End: Complemental strand, 9241098 - 9241048
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcct 452  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  9241098 ccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcct 9241048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 406 - 456
Target Start/End: Complemental strand, 29312321 - 29312271
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcctt 456  Q
    ||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  29312321 ttgggttggcctagtggtattggcttgggatgtgggagtgttctcctcctt 29312271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 383
Target Start/End: Complemental strand, 43128143 - 43128045
Alignment:
Q  285 aagtggctatacaatgcctaaacacaataaaagactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccactacaaaga 383  Q
    |||||||||  ||||||||||| || | || |||||||||||||  |  ||||||| ||||| ||||| | |||||||||||||||||||| |||||||    
T  43128143 aagtggctagccaatgcctaaatacgacaatagactcgaccaccgcagatgttcaccaaatacaaagacatcctttttggctttcaaccaccacaaaga 43128045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 7292871 - 7292818
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| |||||||||||||||||  | |||||||||||||||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcct 7292818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 19238650 - 19238597
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||| |||||||||||||| ||  ||||||||||||||||||    
T  19238650 ccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcct 19238597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 37274533 - 37274464
Alignment:
Q  402 ccacttgggttggcctagtggta-ttggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||||||||||||||| ||| |||||||| || ||||||||||||||||||| ||||| ||| ||||    
T  37274533 ccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttc 37274464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 463
Target Start/End: Complemental strand, 13265184 - 13265120
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||| ||||| |||||||||| |||||||||||| || |||||| |||||||||||||| |||||    
T  13265184 aatctacttgagttggcctagaggtattggcttgggacctgggaatgtgctcctccttatggttt 13265120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 31826612 - 31826680
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||||||| ||||||||||| |||||| ||| || ||||||||||||||| ||||| | ||||||    
T  31826612 ccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttc 31826680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 1730562 - 1730511
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||||||| |||||||||||||||||| || ||| |||||||||||||    
T  1730562 ccacttgggttgacctagtggtattggcttgggacctgagagtgtgctcctc 1730511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 7949527 - 7949468
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||| |||||||| |||||||||||| || || |||||||||||||||| |||||    
T  7949527 ccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggt 7949468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 31759731 - 31759672
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||  ||||||||||||||||| ||  |||||||||||||||||| |||||    
T  31759731 ccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggt 31759672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 37720287 - 37720228
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| ||| |||||||||| || |||||||||||| |||||| |||||    
T  37720287 ccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggt 37720228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 383
Target Start/End: Original strand, 47129246 - 47129333
Alignment:
Q  296 caatgcctaaacacaataaaagactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccactacaaaga 383  Q
    |||||| ||||||| | | | |||| |||||||| | |||||||| ||| | ||| |||||||||||||||||||||||| |||||||    
T  47129246 caatgcttaaacacgacataggactagaccaccacatgtgttcaccaaaaacaaaaatagcctttttggctttcaaccaccacaaaga 47129333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 452
Target Start/End: Complemental strand, 55427273 - 55427223
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcct 452  Q
    |||||||||||||||| |||||||||||||| || |||||||| |||||||    
T  55427273 ccacttgggttggcctggtggtattggcttgggacctgggagtctgctcct 55427223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 12798687 - 12798740
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| || ||||||||||| ||| |||||||||||||||| |||||    
T  12798687 ccacttgggttgaccgagtggtattggtttgagatctgggagtgtgctgctcct 12798740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 28635699 - 28635752
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| ||| |||||| || |||| ||||||||||||||||||||||    
T  28635699 ccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcct 28635752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 39509073 - 39509126
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| ||  ||||| ||||||| ||||||||||||||||||||||    
T  39509073 ccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcct 39509126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 41347036 - 41346983
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||  ||||||||| ||| ||||||||||| ||||||||||    
T  41347036 ccacttgggttggcctgatggtattggtttgagatctgggagtatgctcctcct 41346983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 2622472 - 2622415
Alignment:
Q  402 ccacttgggttggcctagtggt----attggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||    ||||||||| || |||||||||||||||||||    
T  2622472 ccacttgggttggcctagtggtattaattggcttgggacctgggagtgtgctcctcct 2622415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 8030277 - 8030209
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||| ||| ||||||||||| |||||| ||  |||||||||||||||||| ||||| | ||||||    
T  8030277 ccacttggattgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttc 8030209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 19680861 - 19680793
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||| |||||||||||||||| ||||| ||  ||||||||||||| |||| ||||| ||| ||||    
T  19680861 ccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttc 19680793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 461
Target Start/End: Complemental strand, 49576968 - 49576908
Alignment:
Q  401 tccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||| |||||||||||| |||||||||||||  ||  |||||||||||||||||| |||||    
T  49576968 tccaattgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggt 49576908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 4249180 - 4249239
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| | ||||||||||||||| |||||| ||| | |||||||||||||||| |||||    
T  4249180 ccacttcgcttggcctagtggtataggcttgggattttggagtgtgctcctcctcaaggt 4249239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 455
Target Start/End: Complemental strand, 9937032 - 9936981
Alignment:
Q  404 acttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||||||||| | |||| ||  ||||||||||||||||||    
T  9937032 acttgggttggcctagtggtatcgacttgagacttgggagtgtgctcctcct 9936981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 455
Target Start/End: Complemental strand, 21660215 - 21660164
Alignment:
Q  404 acttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||| || ||||||||| |||| ||||||||||||||||| ||||    
T  21660215 acttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcct 21660164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 455
Target Start/End: Complemental strand, 21668979 - 21668928
Alignment:
Q  404 acttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||| || ||||||||| |||| ||||||||||||||||| ||||    
T  21668979 acttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcct 21668928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 29195098 - 29195149
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||||||||||| ||||| |||||||| || || ||||||||||||||    
T  29195098 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 29195149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 455
Target Start/End: Original strand, 17618279 - 17618337
Alignment:
Q  397 ggaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||| |||||||||  ||| | |||||||||||||| || |||||||||||||||||||    
T  17618279 ggaacccacttgggccggcttggtggtattggcttgagacctgggagtgtgctcctcct 17618337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 452
Target Start/End: Original strand, 41683752 - 41683802
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcct 452  Q
    |||||||||||| ||||||||||||||||||  | ||| ||||||||||||    
T  41683752 ccacttgggttgacctagtggtattggcttggaacctgagagtgtgctcct 41683802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 5450090 - 5450157
Alignment:
Q  399 aatccacttgggttggcctagtggtatt---ggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||||| || |||||| |||||||||||   ||||||  ||||||||||||||||||||| |||||||    
T  5450090 aatccatttaggttggactagtggtattattggcttggaatctgggagtgtgctcctcctcaaggttt 5450157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 43623516 - 43623463
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcctt 456  Q
    |||||||||| | |||||| ||||| |||| |||| ||||||||||||||||||    
T  43623516 cacttgggttagtctagtgatattgacttgagatcagggagtgtgctcctcctt 43623463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 43728402 - 43728451
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||  | ||||||||| ||| |||||||||||||||||||||||    
T  43728402 ttgggttggtatggtggtattgacttatgatctgggagtgtgctcctcct 43728451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 452
Target Start/End: Complemental strand, 2185099 - 2185055
Alignment:
Q  408 gggttggcctagtggtattggcttgtgatctgggagtgtgctcct 452  Q
    ||||||||||||||||| |||||||  | ||||||||||||||||    
T  2185099 gggttggcctagtggtaatggcttggaacctgggagtgtgctcct 2185055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 23377974 - 23378018
Alignment:
Q  417 tagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||| |||||||||| || ||||||||||||||||||| |||||    
T  23377974 tagtgttattggcttgggacctgggagtgtgctcctcctcaaggt 23378018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 33619209 - 33619277
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||||||| | | |||||||||||||  |||||||||| ||| |||||||| |||| ||| ||||    
T  33619209 ccacttgggttgccttggtggtattggcttaggatctgggagcgtggtcctccttgaggtcttaggttc 33619277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 453
Target Start/End: Complemental strand, 39030187 - 39030135
Alignment:
Q  401 tccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||| |||||||||| ||||| |||||||| || || ||||||||||||||    
T  39030187 tccactggggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 39030135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 463
Target Start/End: Complemental strand, 52254480 - 52254416
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||||||||| ||||| ||  |||||||| |||| ||| || |||||||||||||||| ||||||    
T  52254480 aatccacttgagttggtctgatggtattgacttgggatatgagagtgtgctcctccttgaggttt 52254416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 33700846 - 33700787
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  33700846 ccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggt 33700787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 461
Target Start/End: Complemental strand, 26232462 - 26232400
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  26232462 aatccacttgggttggtctagtggtattggcttgagatctgggagtgtgctcctgcttgaggt 26232400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 410 - 463
Target Start/End: Complemental strand, 8177247 - 8177194
Alignment:
Q  410 gttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  8177247 gttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggttt 8177194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 9165268 - 9165215
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  9165268 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 9165215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 396 - 461
Target Start/End: Complemental strand, 31794343 - 31794278
Alignment:
Q  396 tggaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||| ||||||||||||||||||||||||||||||| ||  |||||||||||||||||| |||||    
T  31794343 tggaacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggt 31794278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 410 - 459
Target Start/End: Complemental strand, 52336839 - 52336790
Alignment:
Q  410 gttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaag 459  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52336839 gttggcctagtggtattggcttgggatctgggagtgtgctcctccttaag 52336790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 24730386 - 24730438
Alignment:
Q  401 tccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  24730386 tccacttgggttggcctagtggtattgtcttgagatctgggagtgtgctcctc 24730438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 15786393 - 15786334
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| |||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggt 15786334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 36371473 - 36371532
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||    
T  36371473 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggt 36371532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 40257402 - 40257455
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  40257402 ccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcct 40257455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 2799865 - 2799924
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||| | ||||||||||||||| |||||| |||||||||||||||||||||| |||||    
T  2799865 ccacttcgcttggcctagtggtataggcttgagatctgggagtgtgctcctcctcaaggt 2799924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 19528400 - 19528341
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| |||||||||||||| |||||  ||||||||||||||| |||||    
T  19528400 ccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggt 19528341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 41508834 - 41508893
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||| |||||| ||| ||| |||||||||||||||||||||| |||||    
T  41508834 ccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggt 41508893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 455
Target Start/End: Original strand, 17410233 - 17410287
Alignment:
Q  401 tccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  17410233 tccaattgggttggcctagtggtattggtttgggatctgggagtgtggtcctcct 17410287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 417 - 463
Target Start/End: Complemental strand, 44046206 - 44046160
Alignment:
Q  417 tagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||    
T  44046206 tagtggtattggcttgggatctgggagtgtgctcctcctcaaggttt 44046160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 4566551 - 4566604
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  4566551 ccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcct 4566604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 51703786 - 51703835
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  51703786 ttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcct 51703835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 8904417 - 8904485
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||||||||||||||| |||||| |||| ||| || ||||||||||||||| ||||| | ||||||    
T  8904417 ccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttc 8904485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 455
Target Start/End: Complemental strand, 17745328 - 17745276
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||||||||||||||||| || ||| | |||||||||||||    
T  17745328 cacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcct 17745276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 403 - 470
Target Start/End: Original strand, 19088213 - 19088280
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||||||||||||||||||||||| || ||| || || ||| |||||||| ||||||||| ||||    
T  19088213 cacttgggttggcctagtggtattggcctgagatttgagattgtactcctcctcaaggttttaggttc 19088280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 404 - 455
Target Start/End: Complemental strand, 21547551 - 21547500
Alignment:
Q  404 acttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||||||||| ||  |||||| |||||||||||    
T  21547551 acttgggttggcctagtggtattggcttgggacatgggagggtgctcctcct 21547500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 51814497 - 51814556
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||||||  |||||||| |||| |||||| ||||||||||||||| |||||    
T  51814497 ccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggt 51814556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 455
Target Start/End: Original strand, 6650605 - 6650651
Alignment:
Q  409 ggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||    
T  6650605 ggttggcctagtggtattggcttgggatcggggagtatgctcctcct 6650651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 37400279 - 37400345
Alignment:
Q  404 acttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||||||| || |||||||||||||| || |||  |||||||||||||||||||| | ||||||    
T  37400279 acttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttc 37400345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 50901584 - 50901638
Alignment:
Q  402 ccacttgggttggcctagtggt-attggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||||||||| ||||||||| || |||| ||||||||||||||    
T  50901584 ccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcct 50901638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 16170051 - 16169990
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttt 463  Q
    ||||||||||| |||| ||||||||| |||| || ||||||||||| ||||||| |||||||    
T  16170051 ccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggttt 16169990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 25297775 - 25297828
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| |||||||||||| |||  |||||| |||||||||||||||    
T  25297775 ccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcct 25297828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 52116850 - 52116801
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| |||||||||||||| ||  ||||||||||||||||||    
T  52116850 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcct 52116801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 442
Target Start/End: Original strand, 2379424 - 2379468
Alignment:
Q  398 gaatccacttgggttggcctagtggtattggcttgtgatctggga 442  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||    
T  2379424 gaatccacttgggttgacctagtggtattggtttgggatctggga 2379468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 375
Target Start/End: Original strand, 9990643 - 9990723
Alignment:
Q  295 acaatgcctaaacacaataaaagactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccac 375  Q
    ||||||||||||||| | ||  ||||||| ||||| || ||||||| ||| | |||||||||||| || ||||||||||||    
T  9990643 acaatgcctaaacacgacaatggactcgatcaccacaattgttcaccaaaaacaaagatagccttatttgctttcaaccac 9990723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 18459305 - 18459245
Alignment:
Q  402 ccacttgggttggcctagtggta-ttggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||||||| ||||||||| |||||||| ||  ||||||||||||||||||| ||||    
T  18459305 ccacttgggttggtctagtggtaattggcttgggacttgggagtgtgctcctccttgaggt 18459245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 44126398 - 44126450
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcc 454  Q
    |||||||||||||||| ||||||||| | || || ||||||||||||||||||    
T  44126398 ccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctcc 44126450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Original strand, 6122801 - 6122856
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||| ||||||||||| |||||| ||  |||||||||||||||||| |||||    
T  6122801 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggt 6122856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Original strand, 10526830 - 10526885
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||||||| | ||||||||||||||| || |||||||| |||||||||| |||||    
T  10526830 ttgggttggtccagtggtattggcttgggacctgggagtttgctcctcctcaaggt 10526885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 15581214 - 15581163
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||||||||||| ||||| |||||||| || || ||||||||||||||    
T  15581214 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 15581163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 21694449 - 21694500
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||||||| ||| |||||||||||||| ||  ||||||||||||||||    
T  21694449 ccacttgggttgacctggtggtattggcttgagacttgggagtgtgctcctc 21694500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 470
Target Start/End: Complemental strand, 24047174 - 24047107
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||||||||| ||  ||||||||||||| ||  ||||||||||||||||||  |||||| ||||||    
T  24047174 cacttgggttggtctcatggtattggcttgagacttgggagtgtgctcctcctcgaggtttcaagttc 24047107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 39714851 - 39714800
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||||||||| ||||||  |||||||| ||||| ||||||||||||||    
T  39714851 ccacttgggttggcatagtggcgttggcttgggatcttggagtgtgctcctc 39714800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Complemental strand, 42983443 - 42983388
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||| | ||||||||| |||| |||||||||||||| |||||||| ||||    
T  42983443 ttgggttggcatggtggtattgacttgagatctgggagtgtggtcctccttgaggt 42983388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 375
Target Start/End: Original strand, 25388367 - 25388457
Alignment:
Q  285 aagtggctatacaatgcctaaacacaataaaagactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccac 375  Q
    |||||||||  ||||| |||||||| | ||| ||||||||||||| || | ||||| ||||| ||||| | |||||||  |||||||||||    
T  25388367 aagtggctagccaatgtctaaacacgacaaaggactcgaccaccacaaatattcaccaaatacaaagacaacctttttaactttcaaccac 25388457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 8818196 - 8818143
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| |||  |||||||| ||||||| ||||||||||||| |||||    
T  8818196 ccacttgggttgacctgatggtattgacttgtgacctgggagtgtgcttctcct 8818143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 12259263 - 12259316
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||| ||||| ||||  |||| ||| ||||||||||||||||||    
T  12259263 ccacttgggttggcatagtgatattaacttgggatttgggagtgtgctcctcct 12259316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 16893397 - 16893450
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||| |||  ||||||||||||| ||| ||||||||| ||||||||    
T  16893397 ccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcct 16893450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 21268066 - 21268013
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||| ||||| ||||| ||||||||||| ||  ||||||||||||||||||    
T  21268066 ccacttgagttgggctagtagtattggcttgggacttgggagtgtgctcctcct 21268013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 30420313 - 30420366
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||| |||||||| |||||| |||||||| ||| | ||||||||||||||||    
T  30420313 ccacttaggttggccaagtggttttggcttgggatataggagtgtgctcctcct 30420366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 456
Target Start/End: Complemental strand, 31383854 - 31383817
Alignment:
Q  419 gtggtattggcttgtgatctgggagtgtgctcctcctt 456  Q
    |||||||||||||| || ||||||||||||||||||||    
T  31383854 gtggtattggcttgggacctgggagtgtgctcctcctt 31383817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 455
Target Start/End: Original strand, 9964438 - 9964494
Alignment:
Q  399 aatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||| ||||  || ||||| |||| ||||||||||||||||| ||||    
T  9964438 aatccacttgggttagcctgatgttattgacttgggatctgggagtgtgctcttcct 9964494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 39012294 - 39012342
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctc 450  Q
    |||||| ||||||||||||||| |||||||| || || |||||||||||    
T  39012294 ccactttggttggcctagtggtgttggcttgggaccttggagtgtgctc 39012342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 39584601 - 39584693
Alignment:
Q  291 ctatacaatgcctaaacacaataaaagactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccactacaaaga 383  Q
    |||| |||||||||||||| | | | |||| |||||||| || || |||| ||| | |||   |||||||||||||||||||||| |||||||    
T  39584601 ctatccaatgcctaaacacgacataggactagaccaccacaaatgatcaccaaaaataaaacaagcctttttggctttcaaccaccacaaaga 39584693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 95044 - 94985
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggt 94985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 41706 - 41653
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||||||||||    
T  41706 ccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcct 41653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 470
Target Start/End: Original strand, 4348 - 4411
Alignment:
Q  407 tgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||| ||||||||||| |||||| ||| ||||||||||||||| |||||||||||| ||||    
T  4348 tgggttgccctagtggtataggcttgggatttgggagtgtgctccttcttaaggttttaggttc 4411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 32842 - 32775
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagtt 469  Q
    |||||||||||||||| ||||||||||||   |||||||| ||| ||||||||| |||||||||||||    
T  32842 ccacttgggttggcctggtggtattggctgaggatctgggggtgcgctcctcctcaaggttttaagtt 32775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 383
Target Start/End: Complemental strand, 87753 - 87666
Alignment:
Q  296 caatgcctaaacacaataaaagactcgaccaccaaaagtgttcactaaataaaaagatagcctttttggctttcaaccactacaaaga 383  Q
    |||||||||||||| | ||  ||||||||||||| || ||||||||||| | ||||| | |||| ||||||||||||||| |||||||    
T  87753 caatgcctaaacacgacaatggactcgaccaccacaattgttcactaaaaacaaagacaaccttattggctttcaaccaccacaaaga 87666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 405 - 455
Target Start/End: Original strand, 11534 - 11584
Alignment:
Q  405 cttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  11534 cttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcct 11584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 13118 - 13060
Alignment:
Q  403 cacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    ||||| ||||||| | |||||||||||||| |||||||||||||||||||||| |||||    
T  13118 cacttcggttggcttggtggtattggcttgagatctgggagtgtgctcctcctcaaggt 13060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 15396 - 15343
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||| || |||||||||||||| || |||||||||||||||||||    
T  15396 ccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcct 15343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 455
Target Start/End: Complemental strand, 910 - 860
Alignment:
Q  405 cttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||| |||||| |||||||||||||| ||||||||| ||||||||||||    
T  910 cttggggtggcctggtggtattggcttgggatctgggaatgtgctcctcct 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 7797 - 7731
Alignment:
Q  404 acttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||||||| || |||||||||||||| || |||  |||||||||||||||||||| | ||||||    
T  7797 acttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttc 7731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 6988 - 6939
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    ||||||||||||||||||||||||||| ||   |||||||||||||||||    
T  6988 ttgggttggcctagtggtattggcttgggactggggagtgtgctcctcct 6939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 42589 - 42540
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||||||||||||||||| ||||  |||||||||| ||||||||||    
T  42589 ttgggttggcctagtggtattgacttggaatctgggagtatgctcctcct 42540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 459
Target Start/End: Complemental strand, 38979 - 38918
Alignment:
Q  398 gaatccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaag 459  Q
    ||||||||||||||||| || |||||||||||||| || || ||||| ||||| || |||||    
T  38979 gaatccacttgggttggtctggtggtattggcttgggacctaggagtatgctcatctttaag 38918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 157056 - 157007
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctcct 455  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||||||||    
T  157056 ttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcct 157007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 5196 - 5264
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||| |||| |||||||  ||||||||| ||  ||||||||||||||||||||| |||||| ||||    
T  5196 ccacttgagttgtcctagtgtaattggcttgggacttgggagtgtgctcctccttaaagttttaggttc 5264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 47385 - 47453
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||||||| |||| |||||||||||||  ||||||||||| || ||||||| | ||||| ||||||    
T  47385 ccacttgggtttgccttgtggtattggcttaggatctgggagtatgttcctcctcatggtttcaagttc 47453  T

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Target: scaffold0063 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 35462 - 35394
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    |||||| |||| ||| |||||||||||||||  |||| ||||| |||||||||| ||||| ||||||||    
T  35462 ccacttcggtttgcccagtggtattggcttggaatctaggagtatgctcctcctcaaggtcttaagttc 35394  T

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Target: scaffold0337 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Original strand, 1760 - 1815
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||| |||||||| || || ||||| |||||||||| |||||    
T  1760 ttgggttggcctagtggtgttggcttgggaccttggagtttgctcctcctcaaggt 1815  T

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Target: scaffold0180 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 461
Target Start/End: Complemental strand, 20027 - 19976
Alignment:
Q  410 gttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||||||||  | |||||||| |||||||||| |||||    
T  20027 gttggcctagtggtattggcttggaacctgggagtatgctcctcctcaaggt 19976  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Original strand, 12196 - 12251
Alignment:
Q  406 ttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaaggt 461  Q
    |||||||||||||||||| |||||||| || || ||||| |||||||||| |||||    
T  12196 ttgggttggcctagtggtgttggcttgggaccttggagtttgctcctcctcaaggt 12251  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 112285 - 112336
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctc 453  Q
    |||||||||||||||| || |||||||||||  ||||||||||||| |||||    
T  112285 ccacttgggttggcctggttgtattggcttggaatctgggagtgtggtcctc 112336  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 420 - 470
Target Start/End: Complemental strand, 19902 - 19852
Alignment:
Q  420 tggtattggcttgtgatctgggagtgtgctcctccttaaggttttaagttc 470  Q
    ||||||||||||| ||||||||||| ||||||||||| |||| | ||||||    
T  19902 tggtattggcttgggatctgggagtctgctcctccttgaggtctcaagttc 19852  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 458
Target Start/End: Complemental strand, 61721 - 61665
Alignment:
Q  402 ccacttgggttggcctagtggtattggcttgtgatctgggagtgtgctcctccttaa 458  Q
    |||| |||||||  ||||||||||||||||| || |||||||| || ||||||||||    
T  61721 ccacatgggttgatctagtggtattggcttgggacctgggagtatggtcctccttaa 61665  T

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