View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5472-Insertion-7 (Length: 422)
Name: NF5472-Insertion-7
Description: NF5472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5472-Insertion-7 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 408; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 7 - 422
Target Start/End: Original strand, 688265 - 688680
Alignment:
| Q |
7 |
aagtagttgttgaggtaaaatttataacaccacctaaataatcaccgagtaaatccggaacttctgtaacatctacataaacattcaaaattgtgcttat |
106 |
Q |
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| T |
688265 |
aagtagttgttgaggtaaaatttataacaccacctaaataatcaccaagtaaatccggaacttctgtaacatctacataaacattcaaaattgtgcttat |
688364 |
T |
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| Q |
107 |
gttatgtgatttaagagctggaattgtgtcttcatgtaatggagctgtagccaaaagattaccacggtaattaagataagcactgctgttttggtatgta |
206 |
Q |
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| T |
688365 |
gttatgtgatttaagagctggaattgtgtcttcatgtaatggagctgtagccaaaagattaccacggtaattaagataagcactgctgttttggtatgta |
688464 |
T |
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| Q |
207 |
aagcttccatgattaggattatcaaccgtgaccaatatagctaatgataaatttagatccaaaattgggagaatatcaagatgaaaccttccaaacttaa |
306 |
Q |
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| T |
688465 |
aagcttccatgattaggattatcaaccgtgaccaatatagctaatgataaatttagatccaaaattgggagaatatcaagatgaaaccttccaaacttaa |
688564 |
T |
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| Q |
307 |
ctgattgtaatgtaattgtggggtctttttgcttgaaatcagtgaggaataagattaatagtatcactaatactacaattagaaaaatggttgtgacacc |
406 |
Q |
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| T |
688565 |
ctgattgtaatgtaattgtggggtccttttgcttgaaatcagtgaggaataagattaatagtatcactaatactacaattagaaaaatggttgtgacacc |
688664 |
T |
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| Q |
407 |
acaacagatttttagc |
422 |
Q |
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| T |
688665 |
acaacagatttttagc |
688680 |
T |
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