View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5472_high_10 (Length: 313)

Name: NF5472_high_10
Description: NF5472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5472_high_10
NF5472_high_10
[»] chr1 (22 HSPs)
chr1 (20-198)||(26554601-26554793)
chr1 (197-313)||(48119626-48119742)
chr1 (193-313)||(35003288-35003408)
chr1 (197-313)||(38335916-38336032)
chr1 (194-310)||(44112672-44112788)
chr1 (199-313)||(38113181-38113295)
chr1 (199-313)||(46168383-46168497)
chr1 (199-313)||(45427731-45427845)
chr1 (199-313)||(45639718-45639832)
chr1 (199-313)||(45705825-45705939)
chr1 (199-308)||(41065153-41065262)
chr1 (199-313)||(26585462-26585576)
chr1 (195-313)||(35000099-35000217)
chr1 (199-256)||(14427347-14427404)
chr1 (198-298)||(43571087-43571187)
chr1 (199-298)||(37814778-37814877)
chr1 (199-298)||(5489776-5489875)
chr1 (201-285)||(2497576-2497660)
chr1 (199-298)||(23989524-23989624)
chr1 (199-298)||(48498963-48499062)
chr1 (201-298)||(7447828-7447924)
chr1 (199-298)||(750306-750405)
[»] chr4 (35 HSPs)
chr4 (191-313)||(17619138-17619260)
chr4 (198-313)||(55272362-55272477)
chr4 (199-313)||(32728357-32728471)
chr4 (199-309)||(711960-712070)
chr4 (199-313)||(46827692-46827806)
chr4 (201-313)||(38851515-38851627)
chr4 (199-313)||(48435565-48435679)
chr4 (201-313)||(35037007-35037119)
chr4 (194-313)||(960856-960975)
chr4 (201-304)||(3756242-3756344)
chr4 (199-279)||(49229684-49229764)
chr4 (199-298)||(28988473-28988572)
chr4 (232-313)||(19879987-19880068)
chr4 (199-298)||(41847971-41848070)
chr4 (241-313)||(36004102-36004174)
chr4 (199-298)||(23035980-23036079)
chr4 (199-298)||(33703141-33703240)
chr4 (199-285)||(1771280-1771366)
chr4 (199-285)||(27864564-27864650)
chr4 (199-285)||(28982836-28982922)
chr4 (199-285)||(55966360-55966446)
chr4 (201-298)||(27893843-27893940)
chr4 (201-298)||(41327544-41327641)
chr4 (196-298)||(27316714-27316816)
chr4 (200-298)||(41878407-41878505)
chr4 (199-284)||(25051693-25051778)
chr4 (199-298)||(27550309-27550408)
chr4 (196-298)||(35017730-35017831)
chr4 (199-293)||(48463456-48463550)
chr4 (197-298)||(45490314-45490415)
chr4 (195-235)||(36004168-36004208)
chr4 (201-285)||(43514700-43514784)
chr4 (198-284)||(12496955-12497041)
chr4 (201-298)||(43949802-43949900)
chr4 (85-114)||(1933743-1933772)
[»] chr8 (28 HSPs)
chr8 (199-310)||(34304788-34304899)
chr8 (199-310)||(35181516-35181627)
chr8 (199-313)||(16603612-16603726)
chr8 (201-313)||(33629979-33630091)
chr8 (200-313)||(16358819-16358933)
chr8 (199-311)||(18066706-18066818)
chr8 (199-313)||(19386551-19386670)
chr8 (241-313)||(10678138-10678210)
chr8 (198-298)||(1375541-1375641)
chr8 (195-298)||(11582762-11582865)
chr8 (197-298)||(29705360-29705461)
chr8 (199-298)||(36743484-36743583)
chr8 (201-298)||(29800951-29801048)
chr8 (201-298)||(42295197-42295294)
chr8 (201-298)||(26125637-26125734)
chr8 (201-285)||(20148762-20148846)
chr8 (201-285)||(30912576-30912660)
chr8 (201-285)||(42699259-42699343)
chr8 (199-298)||(5754903-5755002)
chr8 (199-298)||(30660743-30660842)
chr8 (207-298)||(31384672-31384763)
chr8 (199-298)||(42197436-42197535)
chr8 (200-285)||(45397317-45397402)
chr8 (199-298)||(40528635-40528735)
chr8 (199-298)||(2165964-2166063)
chr8 (199-298)||(2546996-2547095)
chr8 (198-238)||(9241563-9241603)
chr8 (199-235)||(10678204-10678240)
[»] chr2 (28 HSPs)
chr2 (199-313)||(966820-966934)
chr2 (199-313)||(43114557-43114671)
chr2 (195-313)||(12415446-12415564)
chr2 (195-313)||(12427506-12427624)
chr2 (201-313)||(11825640-11825752)
chr2 (199-313)||(18491705-18491819)
chr2 (201-310)||(41281963-41282072)
chr2 (199-305)||(16803968-16804074)
chr2 (199-305)||(16843250-16843356)
chr2 (201-313)||(4299406-4299518)
chr2 (199-313)||(34895727-34895841)
chr2 (215-313)||(4451936-4452034)
chr2 (219-313)||(12531649-12531742)
chr2 (201-284)||(6518484-6518566)
chr2 (199-313)||(14285676-14285790)
chr2 (200-298)||(34817777-34817875)
chr2 (197-298)||(1750412-1750513)
chr2 (199-298)||(4764727-4764826)
chr2 (199-298)||(30838632-30838731)
chr2 (199-298)||(43335764-43335863)
chr2 (197-298)||(13780736-13780837)
chr2 (197-298)||(16096745-16096846)
chr2 (199-298)||(12302254-12302353)
chr2 (200-298)||(19047158-19047256)
chr2 (199-295)||(42026767-42026865)
chr2 (201-298)||(43490402-43490499)
chr2 (201-284)||(8896598-8896681)
chr2 (196-285)||(7070413-7070502)
[»] chr7 (27 HSPs)
chr7 (198-313)||(31513286-31513401)
chr7 (200-313)||(31408619-31408732)
chr7 (199-310)||(40236919-40237030)
chr7 (199-311)||(27535219-27535331)
chr7 (199-313)||(33384870-33384985)
chr7 (201-298)||(10573751-10573848)
chr7 (196-298)||(24001013-24001115)
chr7 (201-298)||(4638200-4638297)
chr7 (201-298)||(43343625-43343722)
chr7 (201-298)||(44416935-44417032)
chr7 (198-298)||(42538432-42538532)
chr7 (199-298)||(24280597-24280696)
chr7 (199-285)||(42972852-42972938)
chr7 (199-284)||(5194246-5194331)
chr7 (199-298)||(35069721-35069820)
chr7 (199-285)||(9216302-9216387)
chr7 (198-256)||(39998407-39998465)
chr7 (193-298)||(5810925-5811030)
chr7 (199-284)||(43317443-43317528)
chr7 (201-285)||(44326180-44326264)
chr7 (199-298)||(5015395-5015494)
chr7 (202-285)||(26898416-26898499)
chr7 (229-298)||(32029818-32029887)
chr7 (199-256)||(41861674-41861731)
chr7 (215-298)||(38160580-38160663)
chr7 (197-284)||(45326018-45326105)
chr7 (201-298)||(16180358-16180454)
[»] chr5 (12 HSPs)
chr5 (199-313)||(17208074-17208188)
chr5 (199-310)||(30622708-30622818)
chr5 (198-313)||(32473380-32473495)
chr5 (199-298)||(7617133-7617232)
chr5 (196-298)||(2614650-2614752)
chr5 (194-284)||(38470574-38470664)
chr5 (197-298)||(22512303-22512404)
chr5 (199-298)||(33801469-33801568)
chr5 (199-298)||(41334664-41334763)
chr5 (201-298)||(5256997-5257094)
chr5 (194-298)||(18033977-18034081)
chr5 (199-271)||(33855071-33855143)
[»] chr3 (23 HSPs)
chr3 (199-313)||(10457878-10457992)
chr3 (199-310)||(9434124-9434235)
chr3 (199-313)||(25996268-25996382)
chr3 (193-309)||(51757587-51757703)
chr3 (197-313)||(34791827-34791943)
chr3 (199-313)||(4190251-4190365)
chr3 (199-313)||(52627963-52628077)
chr3 (196-285)||(42100685-42100774)
chr3 (197-285)||(45126942-45127030)
chr3 (194-298)||(40808860-40808964)
chr3 (199-298)||(46941053-46941152)
chr3 (193-299)||(53273684-53273790)
chr3 (200-298)||(54237097-54237195)
chr3 (198-298)||(36150129-36150229)
chr3 (199-298)||(24688403-24688502)
chr3 (199-298)||(25413681-25413780)
chr3 (199-298)||(54246149-54246248)
chr3 (200-298)||(40480750-40480848)
chr3 (200-298)||(42394420-42394518)
chr3 (201-298)||(27748565-27748662)
chr3 (241-298)||(51249350-51249407)
chr3 (201-298)||(53581859-53581956)
chr3 (199-298)||(47191027-47191125)
[»] chr6 (21 HSPs)
chr6 (199-313)||(33242403-33242517)
chr6 (201-313)||(27441544-27441656)
chr6 (196-313)||(33253910-33254028)
chr6 (199-313)||(31109208-31109322)
chr6 (199-298)||(3213400-3213499)
chr6 (197-298)||(13743222-13743323)
chr6 (197-298)||(13748722-13748823)
chr6 (199-284)||(7273350-7273435)
chr6 (201-285)||(24204001-24204085)
chr6 (199-298)||(9698334-9698433)
chr6 (199-298)||(26670010-26670109)
chr6 (199-285)||(7367549-7367635)
chr6 (198-298)||(30014342-30014442)
chr6 (199-298)||(21293678-21293777)
chr6 (199-298)||(26466799-26466898)
chr6 (199-298)||(7292747-7292846)
chr6 (199-298)||(21279929-21280028)
chr6 (201-284)||(30735984-30736067)
chr6 (85-114)||(12839252-12839281)
chr6 (85-114)||(25552812-25552841)
chr6 (85-114)||(25993978-25994007)
[»] scaffold0003 (1 HSPs)
scaffold0003 (201-313)||(45705-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (198-313)||(35442-35557)
[»] scaffold0385 (1 HSPs)
scaffold0385 (199-298)||(11251-11350)
[»] scaffold0119 (1 HSPs)
scaffold0119 (199-298)||(685-784)
[»] scaffold0038 (1 HSPs)
scaffold0038 (200-298)||(112656-112754)
[»] scaffold0187 (2 HSPs)
scaffold0187 (199-298)||(14189-14288)
scaffold0187 (199-298)||(24517-24616)
[»] scaffold0157 (1 HSPs)
scaffold0157 (198-284)||(23436-23522)
[»] scaffold0006 (1 HSPs)
scaffold0006 (85-114)||(188215-188244)


Alignment Details
Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 26554601 - 26554793
Alignment:
Q  20 ttgctaatgcaagtgtttataatgttggtcataatgtgttcatcctaatgtgtcagtaa-------------gattttgggagcac--ccaaggactgtt 104  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||             ||||||||||||||  ||||||||||||    
T  26554601 ttgctaatgcgagtgtttataatattggtcataatgtgttcatcctaatgtgtcggtaatgttgatccgtaagattttgggagcacacccaaggactgtt 26554700  T
Q  105 tgtgtgtgctcaaacggttttttagtttactattatgggatgtgaatgggttcaaggtgtccagtgtttttaggcacctttgtatctcttttat 198  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26554701 tgtgtgtgctcaagcggttttttagtttactattatgggatgtgaatgggttcaaggtgtcc-gtgtttttaggcacctttgtatctcttttat 26554793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 48119626 - 48119742
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 296  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  48119626 atggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctc 48119725  T
Q  297 tttcatctcctctccct 313  Q
    |||||||||||||||||    
T  48119726 tttcatctcctctccct 48119742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 193 - 313
Target Start/End: Original strand, 35003288 - 35003408
Alignment:
Q  193 ttttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactt 292  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| ||||||    
T  35003288 ttttttggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatactt 35003387  T
Q  293 tctctttcatctcctctccct 313  Q
    |||||||||||||||||||||    
T  35003388 tctctttcatctcctctccct 35003408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 38335916 - 38336032
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 296  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  38335916 atggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctc 38336015  T
Q  297 tttcatctcctctccct 313  Q
    |||||||||||||||||    
T  38336016 tttcatctcctctccct 38336032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 44112672 - 44112788
Alignment:
Q  194 tttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatacttt 293  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| |||||||    
T  44112672 tttaaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatacttt 44112771  T
Q  294 ctctttcatctcctctc 310  Q
    |||||||||||||||||    
T  44112772 ctctttcatctcctctc 44112788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 38113295 - 38113181
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||| |||||    
T  38113295 ggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccatacttactctt 38113196  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  38113195 tcatctcctctccct 38113181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 46168383 - 46168497
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||||||||| | |||||||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 46168482  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  46168483 tcatctcctctccct 46168497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 45427845 - 45427731
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  45427845 ggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 45427746  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  45427745 tcatctcctctccct 45427731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 45639832 - 45639718
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||  ||||||||||||    
T  45639832 ggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctctt 45639733  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  45639732 tcatctcctctccct 45639718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 45705825 - 45705939
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||| ||||||| ||||||||||||||  ||||||||||| |||||||||| |||| ||||| ||||||||||||||||| ||||||||||||    
T  45705825 ggaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctt 45705924  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  45705925 tcatctcctctccct 45705939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 41065153 - 41065262
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || | ||||||||| ||||||||||||| ||||||||||||    
T  41065153 ggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctctt 41065252  T
Q  299 tcatctcctc 308  Q
    || |||||||    
T  41065253 tcctctcctc 41065262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 26585462 - 26585576
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||||  |||| ||||||||||||| |||  ||||||||||||    
T  26585462 ggaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctcgcaatcatactttctctt 26585561  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  26585562 tcatctcctctccct 26585576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 195 - 313
Target Start/End: Complemental strand, 35000217 - 35000099
Alignment:
Q  195 ttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttc 294  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||| ||  |||| |||| |||| ||||| |||||| |||||||||| ||||||||    
T  35000217 ttatggaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcacaaccatactttc 35000118  T
Q  295 tctttcatctcctctccct 313  Q
    |||||||||||||||||||    
T  35000117 tctttcatctcctctccct 35000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 14427347 - 14427404
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcatta 256  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  14427347 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 298
Target Start/End: Complemental strand, 43571187 - 43571087
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    |||||||||||||||||||| |||||| || ||||||  ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| |||    
T  43571187 tggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 43571088  T
Q  298 t 298  Q
    |    
T  43571087 t 43571087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 37814778 - 37814877
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||| |||| |||||| ||||||| |  ||||||||||||||| ||||||||  ||||||||||||||| ||||||| | ||||| ||||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 37814877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 5489776 - 5489875
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  5489776 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5489875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 2497660 - 2497576
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    |||||||||||| |||| | |||| |||||||  | ||||||||||||||  ||||||||  ||||||||| |||||||||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaac 2497576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 23989624 - 23989524
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaat-catacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    ||||||||||||||||||| ||||| || ||||||| | |||||| |||| ||| |||| |||  |||||||||||| |||||||||| | ||||| |||    
T  23989624 ggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcacaaccacactttatct 23989525  T
Q  298 t 298  Q
    |    
T  23989524 t 23989524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 48499062 - 48498963
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||||  ||||| |  ||||| | |||||||||| |||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  48499062 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 48498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 7447828 - 7447924
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||||||||| || |||| || |||||||| |||||| ||||  ||  ||||| ||| ||||||||||||| | ||||| ||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtaca-cccatgtattacagatattttgataagttcatctcacaaccacactttatctt 7447924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 750405 - 750306
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||| |||||| ||||   || ||||||| ||||||||||||||| || | |||  ||||| ||||||||||||| ||| | ||||| ||||    
T  750405 ggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctcaaaaccacactttatctt 750306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 191 - 313
Target Start/End: Complemental strand, 17619260 - 17619138
Alignment:
Q  191 tcttttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatac 290  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  17619260 tcttttatggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatac 17619161  T
Q  291 tttctctttcatctcctctccct 313  Q
    |||||||||||||||||||||||    
T  17619160 tttctctttcatctcctctccct 17619138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 55272477 - 55272362
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  55272477 tggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctct 55272378  T
Q  298 ttcatctcctctccct 313  Q
    ||||||||||||||||    
T  55272377 ttcatctcctctccct 55272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 32728357 - 32728471
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||  ||||||||||||    
T  32728357 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcatactttctctt 32728456  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  32728457 tcatctcctctccct 32728471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 199 - 309
Target Start/End: Original strand, 711960 - 712070
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||  ||||||||||||    
T  711960 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctctt 712059  T
Q  299 tcatctcctct 309  Q
    |||||||||||    
T  712060 tcatctcctct 712070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 46827806 - 46827692
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| |||||||||  ||| ||||||||    
T  46827806 ggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctcacaaacatattttctctt 46827707  T
Q  299 tcatctcctctccct 313  Q
    |||||||| ||||||    
T  46827706 tcatctcccctccct 46827692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 38851515 - 38851627
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 300  Q
    ||||||||||||||| |||||||||||||||| | || ||||||| |||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||    
T  38851515 aaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctttc 38851614  T
Q  301 atctcctctccct 313  Q
    |||||||||||||    
T  38851615 atctcctctccct 38851627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 48435679 - 48435565
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||  ||||||| ||||    
T  48435679 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 48435580  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  48435579 tcatctcctctccct 48435565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 35037007 - 35037119
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 300  Q
    |||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||| ||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatattttttctttc 35037106  T
Q  301 atctcctctccct 313  Q
     ||||||||||||    
T  35037107 ttctcctctccct 35037119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 313
Target Start/End: Complemental strand, 960975 - 960856
Alignment:
Q  194 tttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatacttt 293  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||| || ||||| |||| ||||||||||||||||| | ||   ||||||    
T  960975 tttaaggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatcttataatcgtacttt 960876  T
Q  294 ctctttcatctcctctccct 313  Q
    |||||||||||||| |||||    
T  960875 ctctttcatctcctatccct 960856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 3756344 - 3756242
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 300  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||  ||||||| ||||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcacaatcatacttt-tctttc 3756246  T
Q  301 atct 304  Q
    ||||    
T  3756245 atct 3756242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 49229764 - 49229684
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatct 279  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||  || ||||||||||||||    
T  49229764 ggaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 28988473 - 28988572
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |||||||||  ||||||||||||||||| || |||| ||||| ||||||||||||| ||| | ||||||||||    
T  28988473 ggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttctctt 28988572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 19879987 - 19880068
Alignment:
Q  232 accctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttcatctcctctccct 313  Q
    |||||||||||||||||||  |||| |||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  19879987 accctattgtacaccccatatattatggacattttggtaaattcatctcacaatcatactttctctttcatctcctttccct 19880068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 41847971 - 41848070
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||| |||||||||||  ||| |||||  ||||||||||||||||||||  ||| |||||| ||||||||| |||||| | ||||||||||    
T  41847971 ggaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctctt 41848070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 36004174 - 36004102
Alignment:
Q  241 tacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttcatctcctctccct 313  Q
    ||||||||||  |||| |||| ||||| |||||| |||||||||| |||||||||||||||||||||||||||    
T  36004174 tacaccccatatattagggacattttgataaatttatctcacaaccatactttctctttcatctcctctccct 36004102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 23035980 - 23036079
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||| ||  |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  23035980 ggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatctt 23036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 33703141 - 33703240
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |  |||| | |||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  33703141 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 33703240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 1771366 - 1771280
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    ||||||||||||||||||| |||||| || ||||||| ||||||||||||||| ||||  ||  ||||| ||| |||||||||||||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaac 1771280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 27864564 - 27864650
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    |||||||||||||| |||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| |||||||||||||    
T  27864564 ggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaac 27864650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 28982922 - 28982836
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    ||||||||||||||||||| |||||| |  |||||||||||||||| |||||  |||| |||  ||||||||| |||||||||||||    
T  28982922 ggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaac 28982836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 55966446 - 55966360
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    |||||||||||||| |||| |||||| ||||||| || |||||||| |||||| |||| |||  ||||||||| |||||||||||||    
T  55966446 ggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaac 55966360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 27893940 - 27893843
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||| |||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 27893843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 41327641 - 41327544
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||  ||| |||||| ||| |||||| ||||||||||  ||||| || |||| ||||||||||||||||||||| | | ||||||||||    
T  41327641 aaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcacatccacactttctctt 41327544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 298
Target Start/End: Complemental strand, 27316816 - 27316714
Alignment:
Q  196 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 295  Q
    |||||||||||||| | ||||| |||||| || ||||||  ||| ||||||||||| ||||||||  ||||||||| ||||||||| ||| | ||||| |    
T  27316816 tatggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttat 27316717  T
Q  296 ctt 298  Q
    |||    
T  27316716 ctt 27316714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 298
Target Start/End: Original strand, 41878407 - 41878505
Alignment:
Q  200 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||  ||||| |||||||||  ||||||||||| || ||||| |||  ||||| ||| ||||||||||||| | || |||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcacaaccaaaccttctctt 41878505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 25051693 - 25051778
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 284  Q
    ||||||||| |||||||||  ||||| || ||||||| ||||||||||| ||| |||| |||  ||||||||| ||||||||||||    
T  25051693 ggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcacaa 25051778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 27550309 - 27550408
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |  ||||| | |||||||||| |||| |||| |||  ||||||||| ||||||| ||||| | ||||| ||||    
T  27550309 ggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaaccacactttatctt 27550408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 298
Target Start/End: Original strand, 35017730 - 35017831
Alignment:
Q  196 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 295  Q
    |||||||||||||||||||||| |||||| || || | |  ||||||||||||||| | || |||  ||||||||| ||||||||||||| | ||||| |    
T  35017730 tatggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctcacaaccacactttat 35017828  T
Q  296 ctt 298  Q
    |||    
T  35017829 ctt 35017831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 48463550 - 48463456
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatacttt 293  Q
    |||||||||||||| |||| | |||| |||||||    |||||||| |||||| |||| |||  ||||||||| ||||||||||||| |||||||    
T  48463550 ggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatacttt 48463456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 298
Target Start/End: Complemental strand, 45490415 - 45490314
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 296  Q
    |||||||||||||||||||||   |||| | ||||| || |||||||||| |||| |||| |||   ||| |||||||||||||||||| | ||||| ||    
T  45490415 atggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatc 45490316  T
Q  297 tt 298  Q
    ||    
T  45490315 tt 45490314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 36004208 - 36004168
Alignment:
Q  195 ttatggaaaatgttacatgaacatcctttaatcatacaccc 235  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  36004208 ttatggaaaatgttacatgaataccctttaatcatacaccc 36004168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 43514784 - 43514700
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    ||||||||||||||||| |||||| || ||||| | |||||||||  |||| |||| ||   ||||||||| |||||||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaac 43514700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 284
Target Start/End: Original strand, 12496955 - 12497041
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 284  Q
    |||||||||||| ||||||| |||||| || ||||| | |||||||| |||||| ||||  ||  ||||||||| ||||||| ||||    
T  12496955 tggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaa 12497041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 43949900 - 43949802
Alignment:
Q  201 aaaatgttacatgaacatcctttaat-catacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||| |||||||||| ||||| || | | ||||  ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 43949802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 1933772 - 1933743
Alignment:
Q  85 gggagcacccaaggactgtttgtgtgtgct 114  Q
    ||||||||||||||||||||||||||||||    
T  1933772 gggagcacccaaggactgtttgtgtgtgct 1933743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 4e-47; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 34304788 - 34304899
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  34304788 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 34304887  T
Q  299 tcatctcctctc 310  Q
    ||||||||||||    
T  34304888 tcatctcctctc 34304899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 35181516 - 35181627
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  35181516 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 35181615  T
Q  299 tcatctcctctc 310  Q
    ||||||||||||    
T  35181616 tcatctcctctc 35181627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 16603726 - 16603612
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||| |||||| |||||    
T  16603726 ggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcacaaccatacttactctt 16603627  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  16603626 tcatctcctctccct 16603612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 201 - 313
Target Start/End: Complemental strand, 33630091 - 33629979
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 300  Q
    ||||||||||| ||||| ||||||||||||||||  ||||||||||| |||||||| |||| |||| |||| ||||||||||||||||||||||||||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcacaactatactttctctttc 33629992  T
Q  301 atctcctctccct 313  Q
    |||||||||||||    
T  33629991 atctcctctccct 33629979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 16358933 - 16358819
Alignment:
Q  200 gaaaatgttacat-gaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||| |  ||||| ||||||||||||||||| ||||||||| ||    
T  16358933 gaaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcacaaccatactttctttt 16358834  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  16358833 tcatctcctctccct 16358819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 199 - 311
Target Start/End: Complemental strand, 18066818 - 18066706
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||| |||||| |||| |||  |||| |||| ||||||||||||| ||||||||||||    
T  18066818 ggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctctt 18066719  T
Q  299 tcatctcctctcc 311  Q
    |||||||||||||    
T  18066718 tcatctcctctcc 18066706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 19386670 - 19386551
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccc-----catgcattaaggacgttttggtaaattcatctcacaactatacttt 293  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||   |     ||||||||||| | |||||| |||||||||||||||||||||||||    
T  19386670 ggaaaatgttacatgaacaccctttaatcatacaccctattatactttctctttcatgcattaagaatgttttgataaattcatctcacaactatacttt 19386571  T
Q  294 ctctttcatctcctctccct 313  Q
    ||||||||||||||||||||    
T  19386570 ctctttcatctcctctccct 19386551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 10678210 - 10678138
Alignment:
Q  241 tacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttcatctcctctccct 313  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10678210 tacaccccatatattaaggacattttggtaaattcatctcacaaccatactttctctttcatctcctctccct 10678138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 298
Target Start/End: Original strand, 1375541 - 1375641
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    |||||||| ||||||||||| | |||| |||||||||| ||||||||||||||  |||| |||  |||||||||||| |||||||||||| ||||| |||    
T  1375541 tggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaactacactttatct 1375640  T
Q  298 t 298  Q
    |    
T  1375641 t 1375641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 11582762 - 11582865
Alignment:
Q  195 ttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttc 294  Q
    ||||||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | |||||     
T  11582762 ttatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacacttta 11582861  T
Q  295 tctt 298  Q
    ||||    
T  11582862 tctt 11582865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 29705360 - 29705461
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 296  Q
    ||||||||||||||||||||| |||||| |  ||||||| ||||||||||||||| |||| |||  ||||| ||| ||||||||||||| | ||||| ||    
T  29705360 atggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatc 29705459  T
Q  297 tt 298  Q
    ||    
T  29705460 tt 29705461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 36743583 - 36743484
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  36743583 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 36743484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 29801048 - 29800951
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||| |||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 29800951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 42295197 - 42295294
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||| |||||| || ||||||  ||||||||| ||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42295294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 26125637 - 26125734
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||| |||| |||||| |||||||  | ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26125734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 20148762 - 20148846
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    |||||||||||| |||| |||||| ||||||| || |||||||||| |||  |||| |||  ||||||||| |||||||||||||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaac 20148846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 30912660 - 30912576
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    ||||||||||||||||| |||||| || ||||||| |||||||||  |||| |||| ||   ||||||||| |||||||||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaac 30912576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 42699259 - 42699343
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    ||||||||||||||||| |||||| || ||||||| ||||||||||  ||| |||| |||  |||| |||| |||||||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaac 42699343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 5754903 - 5755002
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| | |||| || |||| || |||||||| |||||  |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  5754903 ggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaaccacactttatctt 5755002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 30660842 - 30660743
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |  |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||| ||||| | ||||| ||||    
T  30660842 ggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatcttacaaccacactttatctt 30660743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 298
Target Start/End: Original strand, 31384672 - 31384763
Alignment:
Q  207 ttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||| |||||| || ||||  ||||||||||||||||| |||| | |  ||||||||| ||||||||||||| | ||||| ||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaaccacactttatctt 31384763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 42197535 - 42197436
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| | |||| || ||||||| |||| |||| | ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  42197535 ggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42197436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 45397317 - 45397402
Alignment:
Q  200 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    ||||||||||| |||||| |||||| || ||||||| ||| ||||||| ||| |||| |||  |||| |||| |||||||||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcacaac 45397402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 40528735 - 40528635
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaat-catacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    |||||||  |||||||||| ||||| || || | |||| ||||||||||||||  |||| |||| ||||| |||||| |||||||||| | |||||||||    
T  40528735 ggaaaataatacatgaacacccttttattcacaaaccccattgtacaccccatatattagggacattttgataaatttatctcacaaccacactttctct 40528636  T
Q  298 t 298  Q
    |    
T  40528635 t 40528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 2166063 - 2165964
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||| ||||||||||| | |||| || ||||||| |||||| |||||||| ||||  ||  ||||||||| ||||||||| ||| | ||||| ||||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataaccacactttatctt 2165964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 2546996 - 2547095
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||||  ||||| |  ||||| | |||||||||| |||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  2546996 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcacaaccacactttatctt 2547095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 9241563 - 9241603
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctat 238  Q
    ||||||||||||||||||| ||||||| || ||||||||||    
T  9241563 tggaaaatgttacatgaacctcctttattcctacaccctat 9241603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 10678240 - 10678204
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccc 235  Q
    ||||||||||||||||| | |||||||||||||||||    
T  10678240 ggaaaatgttacatgaataccctttaatcatacaccc 10678204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 966934 - 966820
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||    
T  966934 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatactttctctt 966835  T
Q  299 tcatctcctctccct 313  Q
    |||||||| ||||||    
T  966834 tcatctcccctccct 966820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 43114557 - 43114671
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  43114557 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 43114656  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  43114657 tcatctcctctccct 43114671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 195 - 313
Target Start/End: Complemental strand, 12415564 - 12415446
Alignment:
Q  195 ttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttc 294  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||| || |||||||||| ||||||||    
T  12415564 ttatggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttc 12415465  T
Q  295 tctttcatctcctctccct 313  Q
    |||||||||||||||||||    
T  12415464 tctttcatctcctctccct 12415446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 195 - 313
Target Start/End: Complemental strand, 12427624 - 12427506
Alignment:
Q  195 ttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttc 294  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||| || |||||||||| ||||||||    
T  12427624 ttatggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttc 12427525  T
Q  295 tctttcatctcctctccct 313  Q
    |||||||||||||||||||    
T  12427524 tctttcatctcctctccct 12427506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 201 - 313
Target Start/End: Complemental strand, 11825752 - 11825640
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 300  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||  ||||||||||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctctttc 11825653  T
Q  301 atctcctctccct 313  Q
    |||||||||||||    
T  11825652 atctcctctccct 11825640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 18491705 - 18491819
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||| |||||    
T  18491705 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatacttactctt 18491804  T
Q  299 tcatctcctctccct 313  Q
    ||||||||| |||||    
T  18491805 tcatctcctatccct 18491819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 201 - 310
Target Start/End: Complemental strand, 41282072 - 41281963
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 300  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||| ||||||||||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccatactttctctttc 41281973  T
Q  301 atctcctctc 310  Q
    ||||||||||    
T  41281972 atctcctctc 41281963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 199 - 305
Target Start/End: Original strand, 16803968 - 16804074
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||| ||| ||||||||||||| ||||||||||||    
T  16803968 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctt 16804067  T
Q  299 tcatctc 305  Q
    |||||||    
T  16804068 tcatctc 16804074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 199 - 305
Target Start/End: Original strand, 16843250 - 16843356
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||| ||| ||||||||||||| ||||||||||||    
T  16843250 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctt 16843349  T
Q  299 tcatctc 305  Q
    |||||||    
T  16843350 tcatctc 16843356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 201 - 313
Target Start/End: Complemental strand, 4299518 - 4299406
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 300  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||  |||||| ||||||     
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcacaatcatacttactcttta 4299419  T
Q  301 atctcctctccct 313  Q
    |||||||||||||    
T  4299418 atctcctctccct 4299406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 34895841 - 34895727
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||  ||||||| ||||    
T  34895841 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 34895742  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  34895741 tcatctcctctccct 34895727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 313
Target Start/End: Complemental strand, 4452034 - 4451936
Alignment:
Q  215 acatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttcatctcctctccct 313  Q
    ||||||| |||||||||| | |||||||||||  |||||||| |||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4452034 acatcctataatcatacatcttattgtacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctttcatctcctctccct 4451936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 12531742 - 12531649
Alignment:
Q  219 cctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttcatctcctctccct 313  Q
    ||||||||||||||||| |||||||||| || |||||| || | ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12531742 cctttaatcatacacccaattgtacacctcaagcattatgggc-ttttggtaaattcatctcacaaccatactttctctttcatctcctctccct 12531649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 6518566 - 6518484
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 284  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  6518566 aaaatgttacatgaaca-cctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaa 6518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 14285676 - 14285790
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||| |||||  |||| ||||||||||||||||||||||||||||| ||  ||||| ||  ||||||||||||||||||| |   ||||||||||||    
T  14285676 ggaaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctcagagtcatactttctctt 14285775  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  14285776 tcatctcctctccct 14285790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 298
Target Start/End: Complemental strand, 34817875 - 34817777
Alignment:
Q  200 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||| |||||| ||| |||||  ||||||||||||||||| || | || ||||||||||||||||||||||| | ||||||||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctctt 34817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 1750412 - 1750513
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 296  Q
    ||||||||||||||||||||| |||||| || ||||||| ||||||||||| ||| |||| |||  |||| |||| ||||||||||||| | ||||| ||    
T  1750412 atggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatc 1750511  T
Q  297 tt 298  Q
    ||    
T  1750512 tt 1750513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 4764826 - 4764727
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||| |||| | |||| || ||||||||||||||||||||||| ||||   |  ||||||||||||||||||||||| | ||||| ||||    
T  4764826 ggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaaccacactttatctt 4764727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 30838632 - 30838731
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |  |||| | |||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  30838632 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 30838731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 43335863 - 43335764
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||| ||||||||| |||| || ||||||  |||||||| |||||| |||| |||  ||||||||| ||||||||||||||| ||||| ||||    
T  43335863 ggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaactacactttatctt 43335764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 298
Target Start/End: Complemental strand, 13780837 - 13780736
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 296  Q
    |||||||||||||||| ||||   |||| ||| |||||  |||||||||||||| ||||| |||  ||||| ||||||||||||||||| | ||||||||    
T  13780837 atggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctc 13780738  T
Q  297 tt 298  Q
    ||    
T  13780737 tt 13780736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 16096745 - 16096846
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 296  Q
    ||||||||||||||||||||| |||||| || ||||||| ||| ||||||||||| |||| |||  ||||||| | || |||||||||| | ||||| ||    
T  16096745 atggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatc 16096844  T
Q  297 tt 298  Q
    ||    
T  16096845 tt 16096846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 12302353 - 12302254
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |  ||||||| ||||||||||| ||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  12302353 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 12302254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 298
Target Start/End: Original strand, 19047158 - 19047256
Alignment:
Q  200 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||| |||||| || ||||  | ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 19047256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 42026767 - 42026865
Alignment:
Q  199 ggaaaatgttacatgaacatcc--tttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 295  Q
    ||||||||||||||||||| ||  |||| |||||||  | |||||||| |||  |||||| |||  |||||| |||||||||||||||||| |||||||    
T  42026767 ggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcacaactacactttct 42026865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 43490499 - 43490402
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||| |||||| || |||| || ||||||||| | ||| |||| |||  ||||||||| ||||||||| ||| | ||||| ||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccacactttatctt 43490402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 8896681 - 8896598
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 284  Q
    ||||||||||||||||| |||||| ||| |||  | ||||||||||| || || || | |  ||||||||||||||||||||||    
T  8896681 aaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcacaa 8896598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 285
Target Start/End: Original strand, 7070413 - 7070502
Alignment:
Q  196 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    |||| ||||||||||||||||| |||||| ||||||| || ||||||  | ||||  |||  |||| ||||| ||||||||||| |||||    
T  7070413 tatgaaaaatgttacatgaacaccctttattcatacatcccattgtaacctccatttattggggacattttgataaattcatcttacaac 7070502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 31513286 - 31513401
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  31513286 tggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatactttctct 31513385  T
Q  298 ttcatctcctctccct 313  Q
    ||||||||||||||||    
T  31513386 ttcatctcctctccct 31513401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 31408732 - 31408619
Alignment:
Q  200 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctcttt 299  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||  ||||||||||||||| ||||||| |||||||||||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctcttt 31408633  T
Q  300 catctcctctccct 313  Q
    ||||||||||||||    
T  31408632 catctcctctccct 31408619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 40236919 - 40237030
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||| ||||||||    
T  40236919 ggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatattttctctt 40237018  T
Q  299 tcatctcctctc 310  Q
    ||||||||||||    
T  40237019 tcatctcctctc 40237030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 199 - 311
Target Start/End: Complemental strand, 27535331 - 27535219
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||  |||| ||| ||||||||| ||||||||||||||||||||||||||    
T  27535331 ggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcacaactatactttctctt 27535232  T
Q  299 tcatctcctctcc 311  Q
    |||||||||||||    
T  27535231 tcatctcctctcc 27535219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 33384870 - 33384985
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccc-tattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| || |||||||||| |||| ||||||||||||||||||||||  |||||||||||    
T  33384870 ggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatactttctct 33384969  T
Q  298 ttcatctcctctccct 313  Q
    ||||||||||||||||    
T  33384970 ttcatctcctctccct 33384985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 10573751 - 10573848
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||| |||| |||||| ||||||| |||||||||||||||||| |||| | |  ||||||||||||||||||||||| | ||||| ||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatctt 10573848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 298
Target Start/End: Complemental strand, 24001115 - 24001013
Alignment:
Q  196 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 295  Q
    |||||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| |    
T  24001115 tatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 24001016  T
Q  296 ctt 298  Q
    |||    
T  24001015 ctt 24001013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 4638297 - 4638200
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||| | |||| |||||||| | ||||||||||||||  |||| |||  ||||||||| ||||||||||||| ||||||| ||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatctt 4638200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 43343722 - 43343625
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||| |  ||||||||||||||||||||||| |||| |||  ||||| ||| ||||||||||||| | ||||| ||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 43343625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 44417032 - 44416935
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||| |  ||||||||||||||||||||||| |||| |||  ||||| ||| ||||||||||||| | ||||| ||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 44416935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 298
Target Start/End: Complemental strand, 42538532 - 42538432
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    |||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| |||    
T  42538532 tggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatct 42538433  T
Q  298 t 298  Q
    |    
T  42538432 t 42538432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 24280696 - 24280597
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||| |||||| |||||| |||||||||||||| |||| |||||||| ||   |  ||||||||||||||||||||||  | ||||||||||    
T  24280696 ggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactttctctt 24280597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 42972852 - 42972938
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    |||||||||||| ||||||||||||| || ||||| | |||||||||| |||| |||| |||  ||||||||| |||||||||||||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaac 42972938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 5194331 - 5194246
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 284  Q
    ||||||||||||||||||| | |||| |||||||||  ||||||||||| |||  |||||||  ||||| ||||||||||||||||    
T  5194331 ggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcacaa 5194246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 35069721 - 35069820
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||||  ||||| || ||||||  |||||||||| |||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  35069721 ggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 35069820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 9216302 - 9216387
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    ||||||||||||||||||| |||||| || || | ||||||||||| |||||||||||  ||  ||||||||| |||||||||||||    
T  9216302 ggaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatattttggtaagttcatctcacaac 9216387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 39998407 - 39998465
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcatta 256  Q
    ||||||||||||||||||||   |||||||||||| |||||||||||||||||| ||||    
T  39998407 tggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtatta 39998465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 5811030 - 5810925
Alignment:
Q  193 ttttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactt 292  Q
    |||| ||||||||||||||||| || |||||| || ||||||| ||||||||||| ||  |||| |||  ||||| ||| ||||||||||||| | ||||    
T  5811030 ttttttggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactt 5810931  T
Q  293 tctctt 298  Q
    | ||||    
T  5810930 tatctt 5810925  T

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Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 43317443 - 43317528
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 284  Q
    ||||||||||||||||||| | |||| |||||||||  |||||||| || |||| ||| |||  ||||| ||||||||||||||||    
T  43317443 ggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaa 43317528  T

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Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 44326180 - 44326264
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    |||||||||||| |||| |||||| ||||||| || |||||||||| |||  |||| |||  ||||||||| |||||||||||||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaac 44326264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 5015395 - 5015494
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||||  ||||| |  ||||| | |||||||||| |||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  5015395 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5015494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 26898499 - 26898416
Alignment:
Q  202 aaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    |||||||||||||||| | |||| |||||||||| ||||||||  ||||| |||| |||  ||||||||| ||||||| |||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaac 26898416  T

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Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 32029887 - 32029818
Alignment:
Q  229 tacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||| ||||||||||||||| |||| |||  ||||||||||||||||| ||||| | ||||| ||||    
T  32029887 tacaccccattgtacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatctt 32029818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 41861674 - 41861731
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcatta 256  Q
    ||||||||||||||||||| |||||| |||||||||| ||| ||||||| ||| ||||    
T  41861674 ggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtatta 41861731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 298
Target Start/End: Complemental strand, 38160663 - 38160580
Alignment:
Q  215 acatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||| ||| || ||||| | ||||||||||||||| |||| |||  |||| |||| ||||||||||||||| ||||| ||||    
T  38160663 acatcccttattcttacactccattgtacaccccatgtattagggatattttagtaacttcatctcacaactacactttatctt 38160580  T

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Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 45326018 - 45326105
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 284  Q
    ||||||| |||||||| |||| | |||| ||||||| |  ||||||||||||||  |||| |||  ||||||||| ||||||||||||    
T  45326018 atggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcacaa 45326105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 16180454 - 16180358
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||| |||| | |||| || ||||||| ||||||||||||| | ||||   |  ||||||||||||||||||||||| | ||||| ||||    
T  16180454 aaaatgttacatcaacaccatttattcctacaccc-attgtacaccccacgtattataaatattttggtaaattcatctcacaaccacactttatctt 16180358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 4e-44; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 17208074 - 17208188
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||| |||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  17208074 ggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttctctt 17208173  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  17208174 tcatctcctctccct 17208188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 30622818 - 30622708
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||| |||||||||| ||||||||||||    
T  30622818 ggaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctcacaaccatactttctctt 30622720  T
Q  299 tcatctcctctc 310  Q
    ||||||||||||    
T  30622719 tcatctcctctc 30622708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 32473495 - 32473380
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| |||  ||||||||| ||||||||||||| |||||||||||    
T  32473495 tggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatactttctct 32473396  T
Q  298 ttcatctcctctccct 313  Q
    ||||||||||||||||    
T  32473395 ttcatctcctctccct 32473380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 7617133 - 7617232
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |||||||| | ||| ||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  7617133 ggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7617232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 298
Target Start/End: Complemental strand, 2614752 - 2614650
Alignment:
Q  196 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 295  Q
    |||||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| |    
T  2614752 tatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 2614653  T
Q  296 ctt 298  Q
    |||    
T  2614652 ctt 2614650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 194 - 284
Target Start/End: Original strand, 38470574 - 38470664
Alignment:
Q  194 tttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 284  Q
    |||| |||||||||||||| |||| |||||| |||||||  | ||||||||||||||| ||||||||  ||||||||||||||| ||||||    
T  38470574 tttaaggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcacaa 38470664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 22512303 - 22512404
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 296  Q
    ||||||||||||||||||||| |||||| || ||||| | ||||||||| ||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||    
T  22512303 atggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatc 22512402  T
Q  297 tt 298  Q
    ||    
T  22512403 tt 22512404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 33801469 - 33801568
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||||| ||||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  33801469 ggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 33801568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 41334763 - 41334664
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |||||||||  ||| ||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 41334664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 5256997 - 5257094
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||| |||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 5257094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 298
Target Start/End: Original strand, 18033977 - 18034081
Alignment:
Q  194 tttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatacttt 293  Q
    |||| ||||||||||||||||||| |||||| || ||||| | ||||||||||| ||| |||| |||  |||| |||| ||||||||||||| | |||||    
T  18033977 tttaaggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacacttt 18034076  T
Q  294 ctctt 298  Q
     ||||    
T  18034077 atctt 18034081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 33855143 - 33855071
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaa 271  Q
    ||||||||||||||||||| |||||| || ||||||| ||||||||||||||| |||| | || |||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaa 33855071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 10457992 - 10457878
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||    
T  10457992 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctctt 10457893  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  10457892 tcatctcctctccct 10457878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 9434124 - 9434235
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  9434124 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 9434223  T
Q  299 tcatctcctctc 310  Q
    ||||||||||||    
T  9434224 tcatctcctctc 9434235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 25996268 - 25996382
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||||||||||| | |||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  25996268 ggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaaccatattttctctt 25996367  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  25996368 tcatctcctctccct 25996382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 51757587 - 51757703
Alignment:
Q  193 ttttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactt 292  Q
    ||||||||||||| |||||| |||| |||||||||||||||||||||||||||| ||||||||| |||| |||| |||| ||||||||||||| ||||||    
T  51757587 ttttatggaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcacaaccatactt 51757686  T
Q  293 tctctttcatctcctct 309  Q
    |||||||||||||||||    
T  51757687 tctctttcatctcctct 51757703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 34791827 - 34791943
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 296  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| ||| ||||||||| |||| ||||  ||| ||||||||||||| ||||||||||    
T  34791827 atggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatactttctc 34791926  T
Q  297 tttcatctcctctccct 313  Q
    |||||||||||||||||    
T  34791927 tttcatctcctctccct 34791943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 4190365 - 4190251
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||||  ||  ||||||||||||||||||||||| ||||||||||||    
T  4190365 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatactttctctt 4190266  T
Q  299 tcatctcctctccct 313  Q
    ||||||||| |||||    
T  4190265 tcatctcctttccct 4190251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 52628077 - 52627963
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||||||||  ||||||||||||    
T  52628077 ggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatactttctctt 52627978  T
Q  299 tcatctcctctccct 313  Q
    |||||| ||||||||    
T  52627977 tcatcttctctccct 52627963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 285
Target Start/End: Original strand, 42100685 - 42100774
Alignment:
Q  196 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    |||||||||||||||||||||| |||||| || ||||||  ||||||||||||||| |||| |||  ||||||||| |||||||||||||    
T  42100685 tatggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaac 42100774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 45127030 - 45126942
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    |||||||||||||||| |||| |||||| ||||||| || ||||||||||||||| |||| |||  ||||||||| |||||||||||||    
T  45127030 atggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaac 45126942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 298
Target Start/End: Original strand, 40808860 - 40808964
Alignment:
Q  194 tttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatacttt 293  Q
    |||| |||||||||||||| |||| | |||| || ||||||| ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | |||||    
T  40808860 tttaaggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 40808959  T
Q  294 ctctt 298  Q
     ||||    
T  40808960 atctt 40808964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 46941053 - 46941152
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  46941053 ggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 46941152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 299
Target Start/End: Complemental strand, 53273790 - 53273684
Alignment:
Q  193 ttttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactt 292  Q
    ||||| ||||||||||| ||||||||| |||| || || |||  |||||||| |||||| |||| |||  ||||||||| ||||||||||||| ||||||    
T  53273790 ttttaaggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactt 53273691  T
Q  293 tctcttt 299  Q
    | |||||    
T  53273690 tatcttt 53273684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 298
Target Start/End: Original strand, 54237097 - 54237195
Alignment:
Q  200 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 54237195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 298
Target Start/End: Original strand, 36150129 - 36150229
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    |||||||||||||||||| | |||||| |||||||||| ||| ||||||| ||| || | |||  ||||||||| ||||||||||||| | ||||| |||    
T  36150129 tggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatct 36150228  T
Q  298 t 298  Q
    |    
T  36150229 t 36150229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 24688502 - 24688403
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |  ||||| | ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  24688502 ggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24688403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 25413681 - 25413780
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| || ||||||| ||||||||||  ||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  25413681 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 25413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 54246248 - 54246149
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| || ||||||| ||||||||||| ||| ||||  ||  |||| |||| ||||||||||||| | ||||| ||||    
T  54246248 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttatctt 54246149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 298
Target Start/End: Original strand, 40480750 - 40480848
Alignment:
Q  200 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||| |||||| |||||  ||| |||||||| || ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 40480848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 298
Target Start/End: Complemental strand, 42394518 - 42394420
Alignment:
Q  200 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||| |||||| || ||||  | ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42394420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 27748565 - 27748662
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||| | |||| |||||||||  ||| ||||||  ||| |||| |||  ||||||||| ||||||||||||| ||||||| ||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatctt 27748662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 51249350 - 51249407
Alignment:
Q  241 tacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||| |||||||||||||  ||||||||||||||||||||||| | ||||||||||    
T  51249350 tacacctcatgcattaaggatattttggtaaattcatctcacaaccacactttctctt 51249407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 53581956 - 53581859
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||  ||||| |||||||| | |||||||| || ||| |||| |||  ||||| ||| ||||||||||||| | ||||| ||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaaccacactttatctt 53581859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 47191125 - 47191027
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| || ||||||  |||||||| |||||| ||||  ||  ||||| ||| ||||||||||||| | ||||| ||||    
T  47191125 ggaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagttcatctcacaaccacactttatctt 47191027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 33242403 - 33242517
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||    
T  33242403 ggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctctt 33242502  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  33242503 tcatctcctctccct 33242517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 27441544 - 27441656
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 300  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctttc 27441643  T
Q  301 atctcctctccct 313  Q
    |||||||||||||    
T  27441644 atctcctctccct 27441656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 313
Target Start/End: Original strand, 33253910 - 33254028
Alignment:
Q  196 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 295  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||  ||||||| |    
T  33253910 tatggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttat 33254009  T
Q  296 c-tttcatctcctctccct 313  Q
    | |||||||||||||||||    
T  33254010 cttttcatctcctctccct 33254028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 31109322 - 31109208
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||||||||||| || ||| ||||||||||||| || |||  ||||| |||||||| || || || | | ||||||||    
T  31109322 ggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattcaacttacgaccacattttctctt 31109223  T
Q  299 tcatctcctctccct 313  Q
    |||||||||||||||    
T  31109222 tcatctcctctccct 31109208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 3213400 - 3213499
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||| |||| |||||| ||||||| |  ||||||||||||||| ||||||||  ||||||||||||||| ||||||| ||||||| ||||    
T  3213400 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttatctt 3213499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 298
Target Start/End: Complemental strand, 13743323 - 13743222
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 296  Q
    ||||||||||||||||||||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||    
T  13743323 atggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 13743224  T
Q  297 tt 298  Q
    ||    
T  13743223 tt 13743222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 298
Target Start/End: Complemental strand, 13748823 - 13748722
Alignment:
Q  197 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 296  Q
    ||||||||||||||||||||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||    
T  13748823 atggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 13748724  T
Q  297 tt 298  Q
    ||    
T  13748723 tt 13748722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 7273435 - 7273350
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 284  Q
    ||||||||||||||||||| |||||| || |||||| |||||||||||||||| ||||  ||  ||||||||| ||||||||||||    
T  7273435 ggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaa 7273350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 24204085 - 24204001
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    ||||||||||||||||| | |||| || ||||||||||||||||| ||||| |||| |||  ||||||||| |||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaac 24204001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 9698433 - 9698334
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  9698433 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 9698334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 26670109 - 26670010
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| || ||||||  |||||||||| |||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  26670109 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26670010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 7367549 - 7367635
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 285  Q
    ||||||||||| ||||||||| |||| |||||||||  |||||||| |||||| |||| |||  ||||||||| |||||||||||||    
T  7367549 ggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaac 7367635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 298
Target Start/End: Original strand, 30014342 - 30014442
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    |||||||||||||||||||| |||||| || |||| || ||| |||| |||||| |||| | |  ||||||||| ||||||||||||| ||||||| |||    
T  30014342 tggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatct 30014441  T
Q  298 t 298  Q
    |    
T  30014442 t 30014442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 21293777 - 21293678
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||| |||| |||||| |||||||    | ||||||||||||| ||||||||  ||||||||||||||| ||||||| | ||||| ||||    
T  21293777 ggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 21293678  T

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Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 26466799 - 26466898
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||| |||| |||||| || ||||||| ||||||||| ||||| |||| ||   ||||||||| ||||||||||||| | ||||| ||||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttatctt 26466898  T

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Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 7292747 - 7292846
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||| ||||| | |||| |||||||||  ||| ||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  7292747 ggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7292846  T

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Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 21279929 - 21280028
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |  ||||  | |||| ||| |||||| |||| |||  ||||||||||||||||||||||| | ||||| ||||    
T  21279929 ggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcacaaccacactttatctt 21280028  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 30735984 - 30736067
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 284  Q
    |||||||||||||||||   |||| || ||||||| |||||||||| |||| ||||  ||  ||||||||| ||||||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaa 30736067  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 12839281 - 12839252
Alignment:
Q  85 gggagcacccaaggactgtttgtgtgtgct 114  Q
    ||||||||||||||||||||||||||||||    
T  12839281 gggagcacccaaggactgtttgtgtgtgct 12839252  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 25552841 - 25552812
Alignment:
Q  85 gggagcacccaaggactgtttgtgtgtgct 114  Q
    ||||||||||||||||||||||||||||||    
T  25552841 gggagcacccaaggactgtttgtgtgtgct 25552812  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 25994007 - 25993978
Alignment:
Q  85 gggagcacccaaggactgtttgtgtgtgct 114  Q
    ||||||||||||||||||||||||||||||    
T  25994007 gggagcacccaaggactgtttgtgtgtgct 25993978  T

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Target: scaffold0003 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 201 - 313
Target Start/End: Complemental strand, 45817 - 45705
Alignment:
Q  201 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 300  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctttc 45718  T
Q  301 atctcctctccct 313  Q
    |||||||||||||    
T  45717 atctcctctccct 45705  T

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Target: scaffold0100 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 35557 - 35442
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 297  Q
    ||||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||    
T  35557 tggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatactttctct 35458  T
Q  298 ttcatctcctctccct 313  Q
    ||||||||||||||||    
T  35457 ttcatctcctctccct 35442  T

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Target: scaffold0385 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 11251 - 11350
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||| |||||||||  ||||| |||||||||| ||||||||||||||  |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  11251 ggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaaccacactttatctt 11350  T

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Target: scaffold0119 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 685 - 784
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| || ||||||  |||||||||| |||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  685 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 784  T

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Target: scaffold0038 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 298
Target Start/End: Original strand, 112656 - 112754
Alignment:
Q  200 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    |||||||||||||||||| |||||| || ||||  | ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 112754  T

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Target: scaffold0187 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 14288 - 14189
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |  ||||||| |||||||| || ||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  14288 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 14189  T

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Target: scaffold0187; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 24616 - 24517
Alignment:
Q  199 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 298  Q
    ||||||||||||||||||| |||||| |  ||||||| |||||||| || ||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  24616 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 24517  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 23522 - 23436
Alignment:
Q  198 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 284  Q
    |||||||||||| ||||||| |||||| || ||||| | |||||||| |||||| ||||  ||  ||||||||| ||||||| ||||    
T  23522 tggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaa 23436  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 188244 - 188215
Alignment:
Q  85 gggagcacccaaggactgtttgtgtgtgct 114  Q
    ||||||||||||||||||||||||||||||    
T  188244 gggagcacccaaggactgtttgtgtgtgct 188215  T

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