View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5472_high_12 (Length: 279)
Name: NF5472_high_12
Description: NF5472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5472_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 36403016 - 36402754
Alignment:
| Q |
1 |
tgaggaggagcagagaagatgatcatatgatggaagaaaccaatcctttggcgattgtggtagataacagcccttttgatcctattccatctcctactag |
100 |
Q |
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| T |
36403016 |
tgaggaggattagagaagatgatcatatgatggaagaaaccaatcctttggcgattgtggtagataacagcccttttgatcctattccatctcctactag |
36402917 |
T |
|
| Q |
101 |
cagaagaaatatggctggtggaagtgcacgtgcaagtggtcaaggtggtagtgaagaacatgtgtcggtggatagggtgaagaaggaggaagttgatgca |
200 |
Q |
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|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36402916 |
cagaagaaatatggctagtggaagttcacgtgcaagtggtcaaggtggtagtgaagaacatgtgtcggtggatagggtgaagaaggaggaagttgatgca |
36402817 |
T |
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| Q |
201 |
aagatatcagcttggcagaatgctaaagttgctaagattaataacaggttcaagagagatgat |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36402816 |
aagatatcagcttggcagaatgctaaagttgctaagattaataacaggttcaagagagatgat |
36402754 |
T |
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