View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5474_high_24 (Length: 351)
Name: NF5474_high_24
Description: NF5474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5474_high_24 |
 | |
|
| [»] scaffold0044 (1 HSPs) |
| | |
|
| [»] scaffold0057 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 34525511 - 34525844
Alignment:
| Q |
1 |
cttggtaaggatatctgccacttggtattgtgcaagaatgtgagaaacaatcaagtccttgctgatgaccttttctctgacaaagaaaatgtcaagctcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34525511 |
cttggtaaggatatctgccacttggtattgtgcaggaatgtgagagacaatcaagtccttgctgatgaccttttctctgacaaagaaaatgtcaagctcc |
34525610 |
T |
|
| Q |
101 |
atgtgctttgttcttgaatgaagaataggattatgagccagtgatacagtgctcaaattgtcacaaaatatctgaggaatagctgttggaactttcagtt |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34525611 |
atgtgctttgttcttgaatgaagaacaggattatgagccagtgatacagtgctcaaattgtcacaaaatatctgaggaatagcagttggaactttcagtt |
34525710 |
T |
|
| Q |
201 |
ctttaagaagagattgtatccataaaacttcagcagaggcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgtttctt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34525711 |
ctttaagaagagattgtatccataaaacttcagcagaagcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgtttctt |
34525810 |
T |
|
| Q |
301 |
tgcccaccaagatatgagatttggccccagaagt |
334 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
34525811 |
tgcccaccaagatatgagatttggccccagaagt |
34525844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 45570585 - 45570918
Alignment:
| Q |
1 |
cttggtaaggatatctgccacttggtattgtgcaagaatgtgagaaacaatcaagtccttgctgatgaccttttctctgacaaagaaaatgtcaagctcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45570585 |
cttggtaaggatatctgccacttggtattgtgcaggaatgtgagagacaatcaagtccttgctgatgaccttttctctgacaaagaaaatgtcaagctcc |
45570684 |
T |
|
| Q |
101 |
atgtgctttgttcttgaatgaagaataggattatgagccagtgatacagtgctcaaattgtcacaaaatatctgaggaatagctgttggaactttcagtt |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
45570685 |
atgtgctttgttcttgaatgaagaacaggattatgagccagtgatacagtgctcaaattgtcacaaaatatctgaggaatagcagttggaactttcagtt |
45570784 |
T |
|
| Q |
201 |
ctttaagaagagattgtatccataaaacttcagcagaggcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgtttctt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45570785 |
ctttaagaagagattgtatccataaaacttcagcagaagcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgtttctt |
45570884 |
T |
|
| Q |
301 |
tgcccaccaagatatgagatttggccccagaagt |
334 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
45570885 |
tgcccaccaagatatgagatttggccccagaagt |
45570918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 17994679 - 17994346
Alignment:
| Q |
1 |
cttggtaaggatatctgccacttggtattgtgcaagaatgtgagaaacaatcaagtccttgctgatgaccttttctctgacaaagaaaatgtcaagctcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17994679 |
cttggtaaggatatctgccacttggtattgtgcaggtatgtgagaaacaatcaagtccttgctgatgaccttttctctgacaaagaaaatgtcaagctcc |
17994580 |
T |
|
| Q |
101 |
atgtgctttgttcttgaatgaagaataggattatgagccagtgatacagtgctcaaattgtcacaaaatatctgaggaatagctgttggaactttcagtt |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
17994579 |
atgtgctttgttcttgaatgaagaacaggattatgagccagtgatacagtgctcaaattgtcacaaaatatctgaggaatagcagttggaactttcagtt |
17994480 |
T |
|
| Q |
201 |
ctttaagaagagattgtatccataaaacttcagcagaggcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgtttctt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17994479 |
ctttaagaagagattgtatccataaaacttaagcagaagcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgtttctt |
17994380 |
T |
|
| Q |
301 |
tgcccaccaagatatgagatttggccccagaagt |
334 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
17994379 |
tgcccaccaagatatgagatttggccccaaaagt |
17994346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 71 - 312
Target Start/End: Complemental strand, 48430943 - 48430702
Alignment:
| Q |
71 |
ttttctctgacaaagaaaatgtcaagctccatgtgctttgttcttgaatgaagaataggattatgagccagtgatacagtgctcaaattgtcacaaaata |
170 |
Q |
| |
|
||||| || |||||||| ||||| | ||||||||| || ||||| ||||| |||| |||||| ||||| || || |||| ||||| ||||||||| | | |
|
|
| T |
48430943 |
ttttccctcacaaagaagatgtctaactccatgtgtttggttctagaatgtagaacaggattgtgagctagagaaacagcactcaagttgtcacaataaa |
48430844 |
T |
|
| Q |
171 |
tctgaggaatagctgttggaactttcagttctttaagaagagattgtatccataaaacttcagcagaggcttgagccagacttctgtattcagcttcagc |
270 |
Q |
| |
|
|| |||||| || ||||| |||| |||| ||||||||| |||||||| | || ||| |||| |||||||||| |||||||||||||| ||||| |
|
|
| T |
48430843 |
tccgaggaactctggtaggaaccttcaactcttgaagaagagactgtatccagagaatttctgcagcagcttgagccaagcttctgtattcagcctcagc |
48430744 |
T |
|
| Q |
271 |
actggaccttgcaaccagtgtttgtttctttgcccaccaaga |
312 |
Q |
| |
|
||| || || ||||| ||||| || ||||| ||||||||||| |
|
|
| T |
48430743 |
acttgatctggcaacaagtgtctgcttcttagcccaccaaga |
48430702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 309
Target Start/End: Original strand, 25227698 - 25227935
Alignment:
| Q |
72 |
tttctctgacaaagaaaatgtcaagctccatgtgctttgttcttgaatgaagaataggattatgagccagtgatacagtgctcaaattgtcacaaaatat |
171 |
Q |
| |
|
||||||||||||||||||| || | ||||||||||| || || |||||||||| ||| || ||||| ||||| |||| ||||||||||||||| | || |
|
|
| T |
25227698 |
tttctctgacaaagaaaatatctaattccatgtgcttggtcctggaatgaagaacagggttgtgagcaagtgagacagcactcaaattgtcacaataaat |
25227797 |
T |
|
| Q |
172 |
ctgaggaatagctgttggaactttcagttctttaagaagagattgtatccataaaacttcagcagaggcttgagccagacttctgtattcagcttcagca |
271 |
Q |
| |
|
|||||| | ||||| | | || |||| ||||||||| |||| ||| | || || ||||| |||||||| | |||||| || || || |||||| |
|
|
| T |
25227798 |
ttgaggagtcttggttgggatgtgaagctcttgaagaagagactgtaaccaaagaatctctgcagatgcttgagctaaacttctatactctgcctcagca |
25227897 |
T |
|
| Q |
272 |
ctggaccttgcaaccagtgtttgtttctttgcccacca |
309 |
Q |
| |
|
|| || || ||||| || ||||| |||||||||||||| |
|
|
| T |
25227898 |
cttgatctggcaacaagagtttgcttctttgcccacca |
25227935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 309
Target Start/End: Original strand, 25237530 - 25237767
Alignment:
| Q |
72 |
tttctctgacaaagaaaatgtcaagctccatgtgctttgttcttgaatgaagaataggattatgagccagtgatacagtgctcaaattgtcacaaaatat |
171 |
Q |
| |
|
||||||||||||||||||| || | ||||||||||| || || |||||||||| ||| || ||||| ||||| |||| ||||||||||||||| | || |
|
|
| T |
25237530 |
tttctctgacaaagaaaatatctaattccatgtgcttggtcctggaatgaagaacagggttgtgagcaagtgagacagcactcaaattgtcacaataaat |
25237629 |
T |
|
| Q |
172 |
ctgaggaatagctgttggaactttcagttctttaagaagagattgtatccataaaacttcagcagaggcttgagccagacttctgtattcagcttcagca |
271 |
Q |
| |
|
|||||| | ||||| | | || |||| ||||||||| |||| ||| | || || ||||| |||||||| | |||||| || || || |||||| |
|
|
| T |
25237630 |
ttgaggagtcttggttgggatgtgaagctcttgaagaagagactgtaaccaaagaatctctgcagatgcttgagctaaacttctatactctgcctcagca |
25237729 |
T |
|
| Q |
272 |
ctggaccttgcaaccagtgtttgtttctttgcccacca |
309 |
Q |
| |
|
|| || || ||||| || ||||| |||||||||||||| |
|
|
| T |
25237730 |
cttgatctggcaacaagagtttgcttctttgcccacca |
25237767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 35024717 - 35025050
Alignment:
| Q |
1 |
cttggtaaggatatctgccacttggtattgtgcaagaatgtgagaaacaatcaagtccttgctgatgaccttttctctgacaaagaaaatgtcaagctcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35024717 |
cttggtaaggatatctgccacttggtattgtgcaggaatgtgagagacaatcaagtccttgctgatgaccttttctctgacaaagaaaatgtcaagctcc |
35024816 |
T |
|
| Q |
101 |
atgtgctttgttcttgaatgaagaataggattatgagccagtgatacagtgctcaaattgtcacaaaatatctgaggaatagctgttggaactttcagtt |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
35024817 |
atgtgctttgttcttgaatgaagaacaggattatgagccagtgatacagtgctcaaattgtcacaaaatatctgaggaatagcagttggaactttcagtt |
35024916 |
T |
|
| Q |
201 |
ctttaagaagagattgtatccataaaacttcagcagaggcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgtttctt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35024917 |
ctttaagaagagattgtatccataaaacttcagcagaagcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgtttctt |
35025016 |
T |
|
| Q |
301 |
tgcccaccaagatatgagatttggccccagaagt |
334 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
35025017 |
tgcccaccaagatatgagatttggccccagaagt |
35025050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 71 - 312
Target Start/End: Complemental strand, 79707 - 79466
Alignment:
| Q |
71 |
ttttctctgacaaagaaaatgtcaagctccatgtgctttgttcttgaatgaagaataggattatgagccagtgatacagtgctcaaattgtcacaaaata |
170 |
Q |
| |
|
||||| || |||||||| ||||| | |||||||| || ||||| ||||| |||| |||||| ||||| || || |||| ||||| ||||||||| | | |
|
|
| T |
79707 |
ttttccctcacaaagaagatgtctaactccatgtctttagttctagaatgtagaacaggattgtgagctagagagacagcactcaagttgtcacaataaa |
79608 |
T |
|
| Q |
171 |
tctgaggaatagctgttggaactttcagttctttaagaagagattgtatccataaaacttcagcagaggcttgagccagacttctgtattcagcttcagc |
270 |
Q |
| |
|
||||||||| || ||||| |||| |||| ||||||||| |||||||| | || ||| |||| |||||||||| |||||||||||||| ||||| |
|
|
| T |
79607 |
tctgaggaaccctagtaggaaccttcaactcttgaagaagagactgtatccagagaatttctgcagcagcttgagccaagcttctgtattcagcctcagc |
79508 |
T |
|
| Q |
271 |
actggaccttgcaaccagtgtttgtttctttgcccaccaaga |
312 |
Q |
| |
|
|||||| || ||||| ||||| | ||||| ||||||||||| |
|
|
| T |
79507 |
actggatctggcaacaagtgtcggcttcttagcccaccaaga |
79466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 309
Target Start/End: Original strand, 53641 - 53892
Alignment:
| Q |
58 |
cttgctgatgaccttttctctgacaaagaaaatgtcaagctccatgtgctttgttcttgaatgaagaataggattatgagccagtgatacagtgctcaaa |
157 |
Q |
| |
|
|||||||| ||| ||||||||||||| |||||||| | ||||||||||| || || || ||||||| |||||| ||||| ||||| ||||| |||||| |
|
|
| T |
53641 |
cttgctgaggactctttctctgacaaacaaaatgtctaattccatgtgcttggtcctggagtgaagaacaggattgtgagcaagtgagacagtactcaaa |
53740 |
T |
|
| Q |
158 |
ttgtcacaaaatatctgaggaatagctgttggaactttcagttctttaagaagagattgtatccataaaacttcagcagaggcttgagccagacttctgt |
257 |
Q |
| |
|
|| |||||| | |||||||||| |||| | | || |||| |||||||||||||||||| | || || |||| || |||| ||||||||||| |
|
|
| T |
53741 |
ttatcacaataaatctgaggaaccttgcttgggatctgaagctcttgaagaagagattgtatccaaagaatctctgcagctgcctgagtcagacttctgt |
53840 |
T |
|
| Q |
258 |
attcagcttcagcactggaccttgcaaccagtgtttgtttctttgcccacca |
309 |
Q |
| |
|
|||| || ||| |||| ||||| |||| || |||||||||| |||||||| |
|
|
| T |
53841 |
attctgcctcaacacttgacctgacaacaaggatttgtttcttagcccacca |
53892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 321
Target Start/End: Original strand, 26348554 - 26348777
Alignment:
| Q |
98 |
tccatgtgctttgttcttgaatgaagaataggattatgagccagtgatacagtgctcaaattgtcacaaaatatctgaggaatagctgttggaactttca |
197 |
Q |
| |
|
||||| ||||| || || |||||||| | ||||||||||||||| || ||||||||||| |||||||| |||| ||||| | | || ||||| | |
|
|
| T |
26348554 |
tccatatgcttagtcctggaatgaagcacaggattatgagccagagacacagtgctcaagttgtcacagtatatgtgaggcactttaataggtactttta |
26348653 |
T |
|
| Q |
198 |
gttctttaagaagagattgtatccataaaacttcagcagaggcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgttt |
297 |
Q |
| |
|
|||||| || || ||||||| ||| | || ||||||||||||||| || ||||| |||||||| ||||| |||||||| || ||||| || | ||||| |
|
|
| T |
26348654 |
gttcttgtaggagcgattgtagccacagaatttcagcagaggcttgtgcaagactcctgtattctgcttctgcactggatctagcaacaagaggctgttt |
26348753 |
T |
|
| Q |
298 |
ctttgcccaccaagatatgagatt |
321 |
Q |
| |
|
||| |||||||| || |||||||| |
|
|
| T |
26348754 |
cttagcccaccaggaaatgagatt |
26348777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 312
Target Start/End: Original strand, 7734007 - 7734108
Alignment:
| Q |
211 |
agattgtatccataaaacttcagcagaggcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgtttctttgcccaccaa |
310 |
Q |
| |
|
|||||||||||| | | ||||||||||||||| || || ||||||||||| || || ||| |||||| || ||||||||||||||| ||||||||||| |
|
|
| T |
7734007 |
agattgtatccagatgatttcagcagaggcttgtgcaaggcttctgtattctgcctctgcattggaccgggccaccagtgtttgtttccttgcccaccaa |
7734106 |
T |
|
| Q |
311 |
ga |
312 |
Q |
| |
|
|| |
|
|
| T |
7734107 |
ga |
7734108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 32457009 - 32457082
Alignment:
| Q |
67 |
gaccttttctctgacaaagaaaatgtcaagctccatgtgctttgttcttgaatgaagaataggattatgagcca |
140 |
Q |
| |
|
|||||||||||| |||||||||| ||||| ||||||||| ||||||||||| || | ||||||||| ||||||| |
|
|
| T |
32457009 |
gaccttttctctaacaaagaaaaggtcaacctccatgtgttttgttcttgagtgtaaaataggattgtgagcca |
32457082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 35294357 - 35294268
Alignment:
| Q |
229 |
ttcagcagaggcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgtttctttgcccaccaagatatgag |
318 |
Q |
| |
|
||||||||| |||| ||| ||||||||||| ||||| || ||||| ||||| ||||| || ||||||||||| ||||||||||| ||||| |
|
|
| T |
35294357 |
ttcagcagaagcttaagctagacttctgtactcagcctctgcacttgacctagcaacaagagtttgtttcttagcccaccaagagatgag |
35294268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 7733859 - 7733934
Alignment:
| Q |
63 |
tgatgaccttttctctgacaaagaaaatgtcaagctccatgtgctttgttcttgaatgaagaataggattatgagc |
138 |
Q |
| |
|
||||||| ||||||||||||||||| || || | |||||||| |||||||| |||||||||| ||| || ||||| |
|
|
| T |
7733859 |
tgatgactttttctctgacaaagaatatatccaattccatgtgttttgttctagaatgaagaacagggttgtgagc |
7733934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 321
Target Start/End: Complemental strand, 24530579 - 24530356
Alignment:
| Q |
98 |
tccatgtgctttgttcttgaatgaagaataggattatgagccagtgatacagtgctcaaattgtcacaaaatatctgaggaatagctgttggaactttca |
197 |
Q |
| |
|
||||| ||||| || || |||||||| | ||||||||||||||| || ||||||||||| |||||||| |||| ||||| | | || ||||| | |
|
|
| T |
24530579 |
tccatatgcttggtcctggaatgaagcacaggattatgagccagagacacagtgctcaagttgtcacagtatatgtgaggcaccttaataggtactttta |
24530480 |
T |
|
| Q |
198 |
gttctttaagaagagattgtatccataaaacttcagcagaggcttgagccagacttctgtattcagcttcagcactggaccttgcaaccagtgtttgttt |
297 |
Q |
| |
|
|||| | || ||| | |||| ||| |||| ||||||||||||||| || ||||| ||||||| |||| |||||||| || ||||| || | ||||| |
|
|
| T |
24530479 |
gttcctgtaggagaaactgtagccacaaaatttcagcagaggcttgtgcaagactcatgtattctacttctgcactggatctagcaacaagaggctgttt |
24530380 |
T |
|
| Q |
298 |
ctttgcccaccaagatatgagatt |
321 |
Q |
| |
|
||| |||||||| || |||||||| |
|
|
| T |
24530379 |
cttagcccaccaggaaatgagatt |
24530356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 20030919 - 20030846
Alignment:
| Q |
67 |
gaccttttctctgacaaagaaaatgtcaagctccatgtgctttgttcttgaatgaagaataggattatgagcca |
140 |
Q |
| |
|
|||||||||||| ||||||||| ||||| ||||||||| ||||| ||||| || | ||||||||| ||||||| |
|
|
| T |
20030919 |
gaccttttctctaacaaagaaagggtcaatctccatgtgttttgtccttgagtgtaaaataggattgtgagcca |
20030846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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