View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5474_low_4 (Length: 603)

Name: NF5474_low_4
Description: NF5474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5474_low_4
NF5474_low_4
[»] chr2 (22 HSPs)
chr2 (84-593)||(23382487-23382998)
chr2 (20-86)||(37480073-37480140)
chr2 (20-85)||(39714991-39715057)
chr2 (20-84)||(42327406-42327471)
chr2 (21-83)||(16918590-16918653)
chr2 (20-85)||(7799046-7799112)
chr2 (20-85)||(29503270-29503336)
chr2 (20-85)||(34041599-34041665)
chr2 (32-85)||(42602553-42602607)
chr2 (31-84)||(42922414-42922468)
chr2 (20-84)||(19016031-19016096)
chr2 (20-83)||(37755982-37756046)
chr2 (20-82)||(6760889-6760952)
chr2 (20-85)||(14500276-14500342)
chr2 (21-85)||(1729815-1729880)
chr2 (20-84)||(11062360-11062425)
chr2 (20-84)||(23052534-23052599)
chr2 (20-84)||(26545840-26545905)
chr2 (31-87)||(29197398-29197455)
chr2 (50-83)||(31245484-31245517)
chr2 (20-84)||(42860348-42860413)
chr2 (18-85)||(19322767-19322835)
[»] chr6 (15 HSPs)
chr6 (20-85)||(31623002-31623068)
chr6 (20-85)||(33549103-33549169)
chr6 (20-84)||(30127400-30127465)
chr6 (20-80)||(6776618-6776679)
chr6 (20-83)||(6758433-6758497)
chr6 (31-86)||(12188325-12188381)
chr6 (23-84)||(24641204-24641266)
chr6 (20-84)||(12633009-12633074)
chr6 (20-84)||(13227169-13227234)
chr6 (32-82)||(32613163-32613214)
chr6 (20-85)||(3172779-3172845)
chr6 (20-85)||(10338185-10338251)
chr6 (31-84)||(21418470-21418524)
chr6 (25-84)||(9433606-9433666)
chr6 (34-81)||(13441053-13441101)
[»] chr1 (30 HSPs)
chr1 (20-85)||(40257398-40257464)
chr1 (20-82)||(33700784-33700847)
chr1 (20-85)||(41508830-41508896)
chr1 (20-84)||(19528338-19528403)
chr1 (21-85)||(36371469-36371534)
chr1 (31-84)||(9165217-9165271)
chr1 (20-85)||(51814493-51814559)
chr1 (20-84)||(16893394-16893459)
chr1 (21-85)||(25297771-25297836)
chr1 (22-81)||(24730387-24730447)
chr1 (21-84)||(31794276-31794340)
chr1 (96-144)||(39305824-39305872)
chr1 (34-85)||(42412705-42412756)
chr1 (20-83)||(44126396-44126460)
chr1 (31-85)||(4566547-4566602)
chr1 (31-85)||(8177204-8177259)
chr1 (30-84)||(21694446-21694501)
chr1 (20-85)||(11687635-11687701)
chr1 (31-84)||(15581163-15581217)
chr1 (20-81)||(15786331-15786393)
chr1 (32-81)||(26232409-26232459)
chr1 (20-84)||(50901581-50901647)
chr1 (31-84)||(51703779-51703833)
chr1 (31-84)||(52116803-52116857)
chr1 (20-84)||(2799862-2799927)
chr1 (20-84)||(9117119-9117184)
chr1 (20-84)||(10526823-10526888)
chr1 (20-80)||(17745267-17745328)
chr1 (40-84)||(37310007-37310052)
chr1 (33-85)||(46146291-46146344)
[»] chr3 (34 HSPs)
chr3 (21-85)||(31520617-31520682)
chr3 (23-85)||(36720380-36720443)
chr3 (20-77)||(2667869-2667927)
chr3 (20-85)||(10499120-10499186)
chr3 (31-85)||(26988995-26989049)
chr3 (20-85)||(27093372-27093438)
chr3 (23-84)||(31788984-31789046)
chr3 (31-85)||(5499429-5499484)
chr3 (50-85)||(9832496-9832531)
chr3 (31-85)||(46518627-46518682)
chr3 (31-84)||(4222141-4222195)
chr3 (20-77)||(4844522-4844580)
chr3 (20-77)||(4870218-4870276)
chr3 (20-85)||(8051213-8051279)
chr3 (20-85)||(30311305-30311371)
chr3 (34-84)||(51766896-51766946)
chr3 (20-84)||(2597231-2597296)
chr3 (20-84)||(16991542-16991607)
chr3 (20-84)||(28703415-28703480)
chr3 (20-84)||(37788476-37788541)
chr3 (20-84)||(51903889-51903954)
chr3 (20-83)||(47454628-47454692)
chr3 (20-84)||(10445150-10445216)
chr3 (31-84)||(14339610-14339664)
chr3 (31-84)||(16354914-16354968)
chr3 (50-84)||(24459990-24460024)
chr3 (31-84)||(47810766-47810820)
chr3 (21-85)||(7975417-7975482)
chr3 (20-84)||(21960551-21960616)
chr3 (20-87)||(9557317-9557385)
chr3 (96-148)||(14026533-14026585)
chr3 (20-84)||(14186648-14186712)
chr3 (34-85)||(34062575-34062627)
chr3 (31-82)||(42799769-42799821)
[»] chr7 (31 HSPs)
chr7 (21-84)||(19553454-19553517)
chr7 (20-84)||(25590611-25590676)
chr7 (20-84)||(48771938-48772003)
chr7 (20-84)||(26459421-26459486)
chr7 (21-84)||(30442488-30442552)
chr7 (20-86)||(30579333-30579400)
chr7 (31-84)||(25021357-25021411)
chr7 (20-85)||(45709719-45709785)
chr7 (20-84)||(7801180-7801245)
chr7 (20-84)||(18363696-18363761)
chr7 (20-84)||(22760863-22760928)
chr7 (20-84)||(23301613-23301678)
chr7 (20-84)||(31835192-31835257)
chr7 (31-82)||(21854550-21854602)
chr7 (30-85)||(41487361-41487417)
chr7 (31-81)||(15905695-15905746)
chr7 (34-84)||(42836026-42836077)
chr7 (31-81)||(45976945-45976996)
chr7 (20-85)||(2446307-2446373)
chr7 (20-85)||(17041023-17041089)
chr7 (20-85)||(23552117-23552183)
chr7 (20-85)||(43215183-43215249)
chr7 (31-84)||(43590907-43590961)
chr7 (20-84)||(5579245-5579310)
chr7 (20-84)||(15137553-15137618)
chr7 (20-84)||(20335842-20335907)
chr7 (20-84)||(24513797-24513862)
chr7 (20-84)||(39631844-39631909)
chr7 (32-84)||(48039670-48039723)
chr7 (21-84)||(5273602-5273666)
chr7 (49-85)||(35328915-35328951)
[»] chr8 (27 HSPs)
chr8 (20-85)||(16852339-16852405)
chr8 (20-84)||(968362-968427)
chr8 (20-85)||(5264543-5264609)
chr8 (20-85)||(28783059-28783125)
chr8 (31-84)||(30483906-30483960)
chr8 (20-92)||(35641912-35641985)
chr8 (20-83)||(29858060-29858124)
chr8 (20-82)||(2203494-2203557)
chr8 (20-82)||(3624582-3624645)
chr8 (20-85)||(4830486-4830552)
chr8 (20-85)||(8484998-8485064)
chr8 (20-85)||(19703498-19703564)
chr8 (20-84)||(23361660-23361725)
chr8 (20-84)||(26688865-26688930)
chr8 (31-81)||(36042984-36043035)
chr8 (30-84)||(40591732-40591787)
chr8 (31-84)||(6530807-6530861)
chr8 (31-84)||(6569793-6569847)
chr8 (31-84)||(20994480-20994534)
chr8 (34-87)||(22268958-22269012)
chr8 (31-84)||(29431011-29431065)
chr8 (20-85)||(44780125-44780191)
chr8 (33-85)||(5801046-5801099)
chr8 (21-81)||(11492085-11492146)
chr8 (20-84)||(18540298-18540363)
chr8 (20-84)||(23874393-23874458)
chr8 (20-87)||(36205192-36205260)
[»] scaffold0258 (1 HSPs)
scaffold0258 (20-84)||(15334-15399)
[»] chr4 (27 HSPs)
chr4 (20-84)||(19238588-19238653)
chr4 (33-85)||(51250546-51250599)
chr4 (21-84)||(9241037-9241101)
chr4 (20-84)||(37109362-37109427)
chr4 (20-84)||(55427211-55427276)
chr4 (36-86)||(27965537-27965588)
chr4 (20-85)||(21660155-21660221)
chr4 (20-85)||(21668919-21668985)
chr4 (20-85)||(24827824-24827890)
chr4 (20-84)||(17618281-17618346)
chr4 (20-84)||(39509070-39509135)
chr4 (20-84)||(47044717-47044782)
chr4 (21-84)||(28635696-28635760)
chr4 (22-85)||(37720227-37720291)
chr4 (23-85)||(12798683-12798746)
chr4 (31-85)||(29195094-29195149)
chr4 (37-84)||(52054014-52054061)
chr4 (31-84)||(37443702-37443756)
chr4 (20-81)||(41346974-41347036)
chr4 (31-84)||(46545711-46545765)
chr4 (20-77)||(49576905-49576963)
chr4 (20-64)||(38869788-38869833)
chr4 (20-84)||(51948480-51948545)
chr4 (21-84)||(8325391-8325455)
chr4 (20-84)||(19229219-19229283)
chr4 (21-84)||(33619206-33619270)
chr4 (21-84)||(40285623-40285687)
[»] scaffold0299 (1 HSPs)
scaffold0299 (20-78)||(11534-11593)
[»] chr5 (19 HSPs)
chr5 (20-85)||(30109319-30109385)
chr5 (20-84)||(14495816-14495881)
chr5 (20-84)||(25627057-25627122)
chr5 (20-84)||(29075781-29075846)
chr5 (21-84)||(6844729-6844793)
chr5 (21-87)||(34984803-34984870)
chr5 (20-85)||(87434-87500)
chr5 (20-85)||(14285160-14285226)
chr5 (31-84)||(21549159-21549213)
chr5 (20-85)||(30883209-30883275)
chr5 (20-85)||(16436617-16436682)
chr5 (20-84)||(16457810-16457875)
chr5 (20-84)||(16773807-16773872)
chr5 (20-84)||(21589288-21589353)
chr5 (30-85)||(26598523-26598579)
chr5 (31-86)||(29692408-29692464)
chr5 (20-77)||(1410670-1410728)
chr5 (20-84)||(8278286-8278351)
chr5 (21-84)||(7918481-7918545)
[»] scaffold0291 (1 HSPs)
scaffold0291 (20-84)||(2481-2546)
[»] scaffold0118 (1 HSPs)
scaffold0118 (20-84)||(41644-41709)
[»] scaffold0032 (1 HSPs)
scaffold0032 (21-84)||(112282-112346)
[»] scaffold0002 (1 HSPs)
scaffold0002 (20-81)||(94982-95044)
[»] scaffold0194 (1 HSPs)
scaffold0194 (20-80)||(13057-13118)
[»] scaffold0021 (1 HSPs)
scaffold0021 (22-77)||(157000-157056)
[»] scaffold1367 (1 HSPs)
scaffold1367 (20-78)||(851-910)
[»] scaffold0172 (2 HSPs)
scaffold0172 (31-85)||(32791-32846)
scaffold0172 (20-87)||(15788-15856)
[»] scaffold0417 (1 HSPs)
scaffold0417 (39-87)||(10216-10265)
[»] scaffold0063 (1 HSPs)
scaffold0063 (21-84)||(35401-35465)


Alignment Details
Target: chr2 (Bit Score: 453; Significance: 0; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 84 - 593
Target Start/End: Complemental strand, 23382998 - 23382487
Alignment:
Q  84 ttgggatacggagaaattattattaataagaatgacactaatgacagttttacaattgtctccgaggagatttgaaatttatcggttaagacttcaaagt 183  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23382998 ttgggaaacggagaaattattattaataagaatgacgctaatgacatgtttacaattgtctccgaggagatttgaaatttatcggtttagacttcaaagt 23382899  T
Q  184 caactctcacctcggcgctgacataaaataactcgtttcattatattacataaaaggaaatatgaaatattgtagaaatacatttttattttctttgctt 283  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23382898 caactctcacctcggcgctgacagaaaataactcgtttcattatattacataaaaagaaatatgaaatattgtagaaatacatttttattttctttgctt 23382799  T
Q  284 ctcatgtatcagatatggctgtggagtgcacaattatgctagcagaggcgaatgcttcaagtgcaaaacacccaaaagttttggtatgtgatgtttatcc 383  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  23382798 ctcatgtatcagatatggctgtggagtgcacaattatgctagcagaggcgaatgcttcaagtgcaaaacacccaaaagttttggtatgaaatgtttatcc 23382699  T
Q  384 ttcattacttaaagtatatgctattcaacctcattagacccataatgcttatataa--aatttctatttcaggtggttcagattgaaagaagaatttcag 481  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  23382698 ttcattacttaaagtatatgctattcaacctcattagatccatgatgcttatataattaatttctatttcaggtggttcagattgaaagaagaatttcag 23382599  T
Q  482 ctgtcaccggcttcgttcacagctttcttctgcgattaacattcgatcttgctctccaaagtgttgagtgatcatggacaaaggtcctttgttagcatca 581  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23382598 ctgtcaccggcttcgttcacagccttcttctgcgattaacattcgatcttgctctccaaagtgttgagtgatcatggacaaaggtcctttgttagcatca 23382499  T
Q  582 tcacagcctttg 593  Q
    ||||||||||||    
T  23382498 tcacagcctttg 23382487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 37480140 - 37480073
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtttg 86  Q
    ||||||| || ||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||    
T  37480140 gagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtttg 37480073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 39715057 - 39714991
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| ||||||||||||||||| ||| ||| ||||||||||  ||||||||||||||||||    
T  39715057 gagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 42327406 - 42327471
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||    
T  42327406 gagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 16918590 - 16918653
Alignment:
Q  21 agacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggt 83  Q
    |||||| || ||||||||||||||||||| |||| ||||||||||  |||||||||||||||||    
T  16918590 agaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 7799046 - 7799112
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||| ||||| ||||||||||||||||  ||| |||||||||||||| || ||||||||||||||||    
T  7799046 gagatctcgaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggttt 7799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 29503336 - 29503270
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || ||||||||||||||||| ||| || ||||||||||  |||||||||||||||||||    
T  29503336 gagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 34041599 - 34041665
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || ||||||||||||| ||||||| ||| |||||||||  |||||||||||||||||||    
T  34041599 gagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggttt 34041665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 42602607 - 42602553
Alignment:
Q  32 aggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||||||||| ||| |||||||||||||  |||||||||||||||||||    
T  42602607 aggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 42602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 42922468 - 42922414
Alignment:
Q  31 gaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||| | |||||||||||||||  ||||||||||||||||||    
T  42922468 gaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 19016096 - 19016031
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||||||  || ||||||||||||| | | ||||||||||||||||    
T  19016096 gagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 37755982 - 37756046
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggt 83  Q
    ||||||||||  ||||||||| |||||| ||| ||||||||||||||  ||||||||||||||||    
T  37755982 gagacctcgagtaggagcacattcccaggtcccaagccaataccaccaagccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 6760952 - 6760889
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtggg 82  Q
    |||| |||||||||||||| |||||||||| |||| ||||||| ||| | ||||||||||||||    
T  6760952 gagatctcgatgaggagcatactcccagatcccaaaccaatactaccagaccaacccaagtggg 6760889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 14500342 - 14500276
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || |||||||||||||||||||| |||||  |||||||  |||||| ||||||||||||    
T  14500342 gagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggttt 14500276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 1729880 - 1729815
Alignment:
Q  21 agacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||| || ||||||||||||||||  ||| |||||||||||||  | |||||||||||||||||    
T  1729880 agacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggttt 1729815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 11062425 - 11062360
Alignment:
Q  20 gagacctcgatgaggagcacactccca-gatccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || ||| |||||||||||| | |||||||||||| |||  ||||||||||||||||||    
T  11062425 gagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggtt 11062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 23052534 - 23052599
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || ||| ||||||||||||  ||| |||||||||||||| |||||||| |||||||||    
T  23052534 gagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 26545905 - 26545840
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||  ||||||||||| |||||| |||||| |||||||||   ||||||||||||||||    
T  26545905 gagacctcgagaaggagcacacttccagatcccaagctaataccaccaaaccaacccaagtgggtt 26545840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 29197398 - 29197455
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtttgg 87  Q
    ||||||||||||||||  ||| ||| ||||||||||  ||||||||||||||||||||    
T  29197398 gaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggtttgg 29197455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 31245517 - 31245484
Alignment:
Q  50 ccaagccaataccaccgggccaacccaagtgggt 83  Q
    ||||||||| ||||||||||||||||||||||||    
T  31245517 ccaagccaacaccaccgggccaacccaagtgggt 31245484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 42860413 - 42860348
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||||||| || |||| ||||| |||| ||||||| ||||| ||||    
T  42860413 gagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccaggccaactcaagtaggtt 42860348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 19322835 - 19322767
Alignment:
Q  18 cagagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||| || ||||||||||||||||| | |||| ||||||||||  |  ||||||||||||||||    
T  19322835 cagagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggttt 19322767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 31623002 - 31623068
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  31623002 gagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggttt 31623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 33549169 - 33549103
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||| | |||||||||||||||||    
T  33549169 gagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggttt 33549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 30127465 - 30127400
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| |||||||||||||||||| || |||||||||||||| | ||||||||||||||||    
T  30127465 gagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 6776618 - 6776679
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtg 80  Q
    ||||| |||| ||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  6776618 gagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 6758433 - 6758497
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggt 83  Q
    |||||||||| | |||||||||||||| |||| |||||||||||||| ||||||| |||||||||    
T  6758433 gagacctcgaggtggagcacactcccaaatcctaagccaataccaccaggccaacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 12188325 - 12188381
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtttg 86  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||    
T  12188325 gaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtttg 12188381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 24641204 - 24641266
Alignment:
Q  23 acctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||  |||||||||| ||||||    
T  24641204 acctcgaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 12633074 - 12633009
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||| ||||| |||||||||||||||| |||| ||| ||||| ||||||| |||||||||||||||    
T  12633074 gagatctcgaagaggagcacactcccaaatcccaagtcaatatcaccgggacaacccaagtgggtt 12633009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 13227169 - 13227234
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||| |||| |||||||||||||||||||| ||  ||||||||||  ||||||||||||||||||    
T  13227169 gagacttcgaggaggagcacactcccagatctcataccaataccacatggccaacccaagtgggtt 13227234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 32613163 - 32613214
Alignment:
Q  32 aggagcacactcccagatcc-aagccaataccaccgggccaacccaagtggg 82  Q
    ||||||||||||||||| || ||| |||||||||| ||||||||||||||||    
T  32613163 aggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 3172779 - 3172845
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||||||||||||| |||||||| | ||||| ||||| || ||||| ||| |||||||||||    
T  3172779 gagacctcgatgaggagcatactcccaggtcccaagtcaatatcatcgggctaactcaagtgggttt 3172845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 10338185 - 10338251
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || |||||||||||||| || ||| ||||||||||||||  ||||||||||||| ||||    
T  10338185 gagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtgagttt 10338251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 21418524 - 21418470
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||||||| ||||||    
T  21418524 gaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 9433606 - 9433666
Alignment:
Q  25 ctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||| || |||||||||||||||| ||||| ||||||||| ||| ||| |||||||||||    
T  9433606 ctcgaggaagagcacactcccagatcccaagtcaataccacagggtcaatccaagtgggtt 9433666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 13441101 - 13441053
Alignment:
Q  34 gagcacactcccagatcc-aagccaataccaccgggccaacccaagtgg 81  Q
    |||||||||||||| ||| |||||||||||||| | |||||||||||||    
T  13441101 gagcacactcccaggtcccaagccaataccacccgaccaacccaagtgg 13441053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 40257464 - 40257398
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| ||||||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  40257464 gagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 40257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 33700784 - 33700847
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtggg 82  Q
    ||||||| || ||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  33700784 gagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 41508896 - 41508830
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || ||||||||||||||||||||| || ||| ||||||| |||||||||||||||||||    
T  41508896 gagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggttt 41508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 19528338 - 19528403
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||||||||  |||||| |||||||||||||| ||||||||||||||||||    
T  19528338 gagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 36371534 - 36371469
Alignment:
Q  21 agacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||| || ||||||||||||||||| | |||||||||||||||  |||||||||||||||||||    
T  36371534 agaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 9165217 - 9165271
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||    
T  9165217 gaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 51814559 - 51814493
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || ||||||||||||| |||||| |||| |||||||| | |||||||||||||||||||    
T  51814559 gagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggttt 51814493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 16893459 - 16893394
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||| | || |||||||||||||||    
T  16893459 gagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggtcaacccaagtgggtt 16893394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 25297836 - 25297771
Alignment:
Q  21 agacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||  | |||||||||||||||||    
T  25297836 agacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggttt 25297771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 24730447 - 24730387
Alignment:
Q  22 gacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgg 81  Q
    ||||| || |||||||||||||||||||| |||| |||||||||  |||||||||||||||    
T  24730447 gaccttgaagaggagcacactcccagatctcaagacaataccactaggccaacccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 31794276 - 31794340
Alignment:
Q  21 agacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||| || ||||||||||||||||  ||| |||||||||||||  ||||||||||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 39305872 - 39305824
Alignment:
Q  96 gaaattattattaataagaatgacactaatgacagttttacaattgtct 144  Q
    ||||||||||||||||| ||||||||||||||   ||||||||||||||    
T  39305872 gaaattattattaataacaatgacactaatgatcattttacaattgtct 39305824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 42412705 - 42412756
Alignment:
Q  34 gagcacactcccagatc-caagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  42412705 gagcacactcccagatctcaagcca-taccaccgggccaacccaagttggttt 42412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 44126460 - 44126396
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatccaagc-caataccaccgggccaacccaagtgggt 83  Q
    |||||||||  ||||||||||||||||| ||| ||  |||||||||| |||||||||||||||||    
T  44126460 gagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 4566602 - 4566547
Alignment:
Q  31 gaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||||||||||| | ||||||||||| |||  |||||||||||||||||||    
T  4566602 gaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggttt 4566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 8177204 - 8177259
Alignment:
Q  31 gaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||||||||||||| |||||||||||||||  ||||||| ||| |||||||    
T  8177204 gaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggttt 8177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 21694501 - 21694446
Alignment:
Q  30 tgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||||||||||  || ||||||||||||||| || |||||||||||||||    
T  21694501 tgaggagcacactcccaagtctcaagccaataccaccaggtcaacccaagtgggtt 21694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 11687635 - 11687701
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||||  ||||||||||| |||||| ||||| |||| |||| || |||||||||||||||||    
T  11687635 gagacctcgaaaaggagcacacttccagatcccaagtcaatgccactggaccaacccaagtgggttt 11687701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 15581163 - 15581217
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||||||| || ||| ||||||| |||||| ||||||||||||||||||    
T  15581163 gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 15581217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 15786331 - 15786393
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgg 81  Q
    ||||||| || ||||||||||||||||||| |||||||||||| ||  | |||||||||||||    
T  15786331 gagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 26232409 - 26232459
Alignment:
Q  32 aggagcacactcccagatc-caagccaataccaccgggccaacccaagtgg 81  Q
    ||||||||||||||||||| ||||||||||||||  | |||||||||||||    
T  26232409 aggagcacactcccagatctcaagccaataccactagaccaacccaagtgg 26232459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 50901647 - 50901581
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaa-taccaccgggccaacccaagtgggtt 84  Q
    |||||||||| |||||||||||| |||| | ||||||||| ||||||  ||||||||||||||||||    
T  50901647 gagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgggtt 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 51703833 - 51703779
Alignment:
Q  31 gaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||||| |||||||||||||||  | ||||||||| ||||||    
T  51703833 gaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 52116803 - 52116857
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||||||| ||||||    
T  52116803 gaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 2799927 - 2799862
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||||||||||||||| |||||| |||||||  |||||| | |||||||||    
T  2799927 gagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 9117184 - 9117119
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||| | |||||||||||| |||||| ||||||| |||||| | ||||||||||| ||||||    
T  9117184 gagacctcaaggaggagcacacttccagatcccaagcccataccaaccggccaacccaaatgggtt 9117119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 10526888 - 10526823
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||| |||||||| ||| ||||||||||||| || ||||||||| ||||||    
T  10526888 gagaccttgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaaatgggtt 10526823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 17745267 - 17745328
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtg 80  Q
    |||||||||| ||||||||||| | ||| ||| |||||||||||||  ||||||||||||||    
T  17745267 gagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 37310007 - 37310052
Alignment:
Q  40 actcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||||    
T  37310007 actcccagatccgaagctaataccaccaggccaacccaagtgggtt 37310052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 46146291 - 46146344
Alignment:
Q  33 ggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||| |||||||||| |||| ||||||| ||| |||||||||||||||||    
T  46146291 ggagcacattcccagatcccaagctaataccatcggaccaacccaagtgggttt 46146344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 6e-17; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 31520617 - 31520682
Alignment:
Q  21 agacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  31520617 agacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggttt 31520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 36720443 - 36720380
Alignment:
Q  23 acctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| |||||||||||||||| |||| |||||||||||||| | |||||||||||||||||    
T  36720443 acctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggttt 36720380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 2667927 - 2667869
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaa 77  Q
    |||||||||| || |||||||||||||||||| |||||||||||||| |||||||||||    
T  2667927 gagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 10499120 - 10499186
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||| | || ||||| |||||||||||| |||||||||||||| |||||||||||||||||||    
T  10499120 gagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggttt 10499186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 26989049 - 26988995
Alignment:
Q  31 gaggagcacactcccagatccaagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||| |||| ||||||||||||||||||||  |||||||||||||||||||    
T  26989049 gaggagcaaactctcagatccaagccaataccactaggccaacccaagtgggttt 26988995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 27093372 - 27093438
Alignment:
Q  20 gagacctcgatgaggagcacactccca-gatccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || |||||||||||||||| | ||||||||||||||||  |||||||||||||||||||    
T  27093372 gagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggttt 27093438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 31788984 - 31789046
Alignment:
Q  23 acctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||    
T  31788984 acctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 5499429 - 5499484
Alignment:
Q  31 gaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||||||| |||||| |||| |||||||||| |||||||||||||||||||    
T  5499429 gaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggttt 5499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 85
Target Start/End: Complemental strand, 9832531 - 9832496
Alignment:
Q  50 ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||||||||||||||||||||||||||||||    
T  9832531 ccaagccaataccaccgggccaacccaagtgggttt 9832496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 46518682 - 46518627
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||||||||||||||| |||||||||||||   ||||||||||||||||||    
T  46518682 gaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 4222195 - 4222141
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||||||| |||||||||||||   |||||||||||||||||    
T  4222195 gaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 4844522 - 4844580
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaa 77  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||| | |||||||||    
T  4844522 gagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 4870218 - 4870276
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaa 77  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||| | |||||||||    
T  4870218 gagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 8051279 - 8051213
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| ||| |||| ||| |||| ||| |||||||||||||| |||||||||||||||||||    
T  8051279 gagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggttt 8051213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 30311371 - 30311305
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||||  |||||||||| ||||||||    
T  30311371 gagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggttt 30311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 51766946 - 51766896
Alignment:
Q  34 gagcacactcccagatccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||||||| |||||||| ||| | ||||||||||||||    
T  51766946 gagcacactcccagatccaagtcaataccatcggactaacccaagtgggtt 51766896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 2597231 - 2597296
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||| | |||||||||||||| | |||| |||||||||||||| | ||||||||||||||||    
T  2597231 gagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 16991607 - 16991542
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||| | || ||| |||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  16991607 gagacctcaaagaagagtacactcccagatcccaagccaataccaccaggccaacccaaatgggtt 16991542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 28703415 - 28703480
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || ||||||||||||||||||| |||||| |||| ||| || ||||||||||||||||    
T  28703415 gagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 37788476 - 37788541
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||||||||| || | ||||| ||||||||| |||||||||||||||||||    
T  37788476 gagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 51903889 - 51903954
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||| | || ||||||| |||||||    
T  51903889 gagaccacgaggaggagcacactcccagatcccaagccaataccaacaggtcaacccaggtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 47454628 - 47454692
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggt 83  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||  |  ||||||||||||||    
T  47454628 gagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 10445150 - 10445216
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaa-taccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||||||| | ||||||||| | ||||  ||||||||||||||||||    
T  10445150 gagacctcgaggaggagcacactcccaggtcccaagccaattgccactaggccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 14339664 - 14339610
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||||||||| |||| |||||||||||||| |||||| |||| ||||||    
T  14339664 gaggagcacactcccaaatcccaagccaataccaccaggccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 16354914 - 16354968
Alignment:
Q  31 gaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||| ||| | |||||||||||||||  ||||||||||||||||||    
T  16354914 gaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 24460024 - 24459990
Alignment:
Q  50 ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||||||||| ||||||||||||||||||    
T  24460024 ccaagccaataccaccaggccaacccaagtgggtt 24459990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 47810766 - 47810820
Alignment:
Q  31 gaggagcacactccca-gatccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||||||||| || | |||||||||||||| | ||||||||||||||||    
T  47810766 gaggagcacactcccaagaccaaagccaataccaccagaccaacccaagtgggtt 47810820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 7975482 - 7975417
Alignment:
Q  21 agacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||| || ||||||||||||||||||| ||||||| |||||||  |||||||| || |||||||    
T  7975482 agaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggttt 7975417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 21960616 - 21960551
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||| ||| | |||||||||||||||| |  |||||||| ||||||    
T  21960616 gagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 9557385 - 9557317
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtttgg 87  Q
    |||| ||||| ||||||||||||| ||||| |||||||||||| | | ||||| | |||||||||||||    
T  9557385 gagatctcgaggaggagcacactctcagatcccaagccaatactatcaggccagctcaagtgggtttgg 9557317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 14026585 - 14026533
Alignment:
Q  96 gaaattattattaataagaatgacactaatgacagttttacaattgtctccga 148  Q
    ||||||||||||||| | ||| | ||||||||||||||||| |||||| ||||    
T  14026585 gaaattattattaattaaaataaaactaatgacagttttactattgtccccga 14026533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 14186712 - 14186648
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || ||||||||||||||  |  ||||| |||||||||  ||||||||||||||||||    
T  14186712 gagaccttgaggaggagcacactccaggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 34062575 - 34062627
Alignment:
Q  34 gagcacactcccagatc-caagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||||||| ||  |||||||||| ||| ||||||||||||||||||||    
T  34062575 gagcacactcccaaatttcaagccaatatcactgggccaacccaagtgggttt 34062627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 42799769 - 42799821
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtggg 82  Q
    |||||||||||||| || ||| ||||||| |||||| ||||||||||||||||    
T  42799769 gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtggg 42799821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 9e-16; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 19553517 - 19553454
Alignment:
Q  21 agacctcgatgaggagcacactcccagatccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||| || ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  19553517 agaccttgaggaggagcacactcccaggtccaagccaataccaccaggccaacccaagcgggtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 25590676 - 25590611
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| | || |||||||||||||||    
T  25590676 gagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 48772003 - 48771938
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  48772003 gagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 26459421 - 26459486
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||    
T  26459421 gagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 30442552 - 30442488
Alignment:
Q  21 agacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||| || |||||||| |||||||| ||| ||||||||||||| |||||||||||||||||||    
T  30442552 agaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 30579400 - 30579333
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtttg 86  Q
    ||||||| || |||| | |||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  30579400 gagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggtttg 30579333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 25021357 - 25021411
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||    
T  25021357 gaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 45709719 - 45709785
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| ||||||||||||| ||||| |||||| ||||||||  ||||||||||| |||||||    
T  45709719 gagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 7801245 - 7801180
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || ||||||||||||||||| ||| ||| |||||||||| |||||| |||||||||||    
T  7801245 gagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 18363761 - 18363696
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||||||||||| ||| |||||| |||||||  ||||||||||||||||||    
T  18363761 gagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 22760928 - 22760863
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || ||||||||||||||||| ||| ||| |||||||||| | ||||||||||||||||    
T  22760928 gagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 23301613 - 23301678
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||| | ||||||||||||||||  ||| ||| |||||||||| ||||||||||||||||||    
T  23301613 gagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 31835257 - 31835192
Alignment:
Q  20 gagacctcgatgaggagcacactcccag-atccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||||||||| || | ||||||||| |||||| ||||||||||||||||||    
T  31835257 gagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 21854602 - 21854550
Alignment:
Q  31 gaggagcacactcccagatcca-agccaataccaccgggccaacccaagtggg 82  Q
    |||||||||||||||||||||  ||||||||||| | ||||||||||||||||    
T  21854602 gaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 41487417 - 41487361
Alignment:
Q  30 tgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| |||||||||  ||| |||||||||||||| |||||||||||||||||||    
T  41487417 tgaggagaacactcccaagtcccaagccaataccaccaggccaacccaagtgggttt 41487361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 15905695 - 15905746
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgg 81  Q
    ||||||||||||||||| ||| ||||||||||| || |||||||||||||||    
T  15905695 gaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 42836026 - 42836077
Alignment:
Q  34 gagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||||||| ||| |||||||||||||  ||||||||||||||||||    
T  42836026 gagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 45976945 - 45976996
Alignment:
Q  31 gaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgg 81  Q
    ||||||||||||||||| || ||||||||||||||  |||||||||||||||    
T  45976945 gaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 2446373 - 2446307
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||| ||||| ||||||||||||||||  ||| |||||||||||| | | |||||||||||||||||    
T  2446373 gagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggttt 2446307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 17041023 - 17041089
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || |||||||||||| |||||| |||||||||| ||||  | |||||||||||||||||    
T  17041023 gagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggttt 17041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 23552183 - 23552117
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || ||||||||||||||||| ||| ||| ||||| |||  |||||||||||||||||||    
T  23552183 gagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggttt 23552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 43215249 - 43215183
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || |||||||||||||| || ||| |||||||||||||  | |||||||||||||||||    
T  43215249 gagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggttt 43215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 43590961 - 43590907
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||||||| ||||||    
T  43590961 gaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 5579245 - 5579310
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||||||||| || ||| ||||||| |||||| || |||||||||||||||    
T  5579245 gagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 15137618 - 15137553
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||||||||| | |||| ||| || ||||||| ||||||||||||||||||    
T  15137618 gagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 20335842 - 20335907
Alignment:
Q  20 gagacctcgatgaggagcacactccc-agatccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||||| ||  ||||||||||||| |  | ||||||||||||||||    
T  20335842 gagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 24513862 - 24513797
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||| | ||| || ||||||||| ||| ||||||||||||||  ||||||||||||||||||    
T  24513862 gagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 39631909 - 39631844
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||  |||||||| ||| |||||||||||||  ||||||||||||||||||    
T  39631909 gagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 48039670 - 48039723
Alignment:
Q  32 aggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| ||||| ||||| |||||||| |||||| ||||||||||||||||||    
T  48039670 aggagcatactccaagatcgcaagccaacaccaccaggccaacccaagtgggtt 48039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 5273602 - 5273666
Alignment:
Q  21 agacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||| || |||||||||||||  || ||| ||||||| |||||| ||||||||||||||||||    
T  5273602 agaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 35328915 - 35328951
Alignment:
Q  49 tccaagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| |||||| |||||||||||||||||||    
T  35328915 tccaagccaacaccaccaggccaacccaagtgggttt 35328951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 16852405 - 16852339
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||  |||||||||||||||||||    
T  16852405 gagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 16852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 968427 - 968362
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||| ||||||||||    
T  968427 gagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 5264609 - 5264543
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| |||||||||| |||||| | |||||||||||||||  |||||||||||||||||||    
T  5264609 gagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggttt 5264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 28783125 - 28783059
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || ||||||||||||||||| || |||||||||||||||  ||||||||||||||||||    
T  28783125 gagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 30483906 - 30483960
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  30483906 gaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 35641912 - 35641985
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtttgggatac 92  Q
    ||||| |||| |||||||||||||||| ||| |||||| |||||||| | ||||||||||||||||| ||||||    
T  35641912 gagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggtttaggatac 35641985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 29858060 - 29858124
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggt 83  Q
    |||||||||| ||||||||||||||| | ||| |||||||||||||| |||||| ||||||||||    
T  29858060 gagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 2203557 - 2203494
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtggg 82  Q
    ||||||| || ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||    
T  2203557 gagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 3624645 - 3624582
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtggg 82  Q
    ||||||| || ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||    
T  3624645 gagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 4830552 - 4830486
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| ||||| ||||||| ||||||| || | ||||||||| |||||||||||||||||||    
T  4830552 gagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 8485064 - 8484998
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||| | ||||||||||||| ||| ||| |||| ||||||||| |||||||||||||||||||    
T  8485064 gagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtgggttt 8484998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 19703498 - 19703564
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || ||||||||||||| ||| ||| |||||||||||||  |||||||||||||||||||    
T  19703498 gagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 23361660 - 23361725
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||||||||||| |||| ||| |||||||||| || |||||||||||||||    
T  23361660 gagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 26688930 - 26688865
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||||||||| || ||| ||||||| |||||| ||||||||||||||||||    
T  26688930 gagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 36043035 - 36042984
Alignment:
Q  31 gaggagcacactccca-gatccaagccaataccaccgggccaacccaagtgg 81  Q
    ||||| |||||||||| ||||||||||||||||||| | |||||||||||||    
T  36043035 gaggaacacactcccaagatccaagccaataccaccagcccaacccaagtgg 36042984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 40591787 - 40591732
Alignment:
Q  30 tgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||||||||||  ||| |||||||||||||| ||||||| ||||||||||    
T  40591787 tgaggagcacactcccaagtccgaagccaataccaccaggccaacacaagtgggtt 40591732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 6530861 - 6530807
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||||||| || ||| ||||||| |||||| ||||||||||||||||||    
T  6530861 gaggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgggtt 6530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 6569793 - 6569847
Alignment:
Q  31 gaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||||| ||||||||||| |||  |||||||| |||||||||    
T  6569793 gaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 20994480 - 20994534
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||| ||| ||| |||||||||  ||||||||||||||||||    
T  20994480 gaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 22268958 - 22269012
Alignment:
Q  34 gagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtttgg 87  Q
    ||||||||||| || ||| ||||||| |||||| |||||||||||||||||||||    
T  22268958 gagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtttgg 22269012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 29431065 - 29431011
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||  ||| ||||||||||| || ||||||||||||||||||    
T  29431065 gaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 44780125 - 44780191
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || ||||||||||||||||  ||| |||||||| ||||  |||||||||||||||||||    
T  44780125 gagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggttt 44780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 5801099 - 5801046
Alignment:
Q  33 ggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||||| |||||| |||| ||||||||| || ||||||||||||||||    
T  5801099 ggagcacactcctagatcccaagctaataccaccaggtcaacccaagtgggttt 5801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 11492085 - 11492146
Alignment:
Q  21 agacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgg 81  Q
    |||||||||  ||||||||||||||||||| ||||||||||||  |  ||||||||||||||    
T  11492085 agacctcgagaaggagcacactcccagatctcaagccaataccgacatgccaacccaagtgg 11492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 18540363 - 18540298
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || ||| || |||||||||| ||| |||||||||||||  ||||||||||||||||||    
T  18540363 gagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 23874393 - 23874458
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| |||| ||| | |||||| ||| |||||||||||||  ||||||||||||||||||    
T  23874393 gagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 36205260 - 36205192
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtttgg 87  Q
    ||||||| || |||||||||||||||||||| ||| |||||| || | | ||||||||||||| |||||    
T  36205260 gagaccttgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtggatttgg 36205192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 15334 - 15399
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||| | ||||||||||||||||    
T  15334 gagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 19238588 - 19238653
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||||||  ||| |||||||||||||| ||||||||||||||||||    
T  19238588 gagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 51250546 - 51250599
Alignment:
Q  33 ggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  51250546 ggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 9241037 - 9241101
Alignment:
Q  21 agacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  9241037 agacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 37109362 - 37109427
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||    
T  37109362 gagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 55427211 - 55427276
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||  ||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||    
T  55427211 gagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 27965537 - 27965588
Alignment:
Q  36 gcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtttg 86  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggtttg 27965588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 21660155 - 21660221
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| || ||||||||||||||||| |||| |||||||||| | ||||||||||| |||||    
T  21660155 gagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttt 21660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 21668919 - 21668985
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| || ||||||||||||||||| |||| |||||||||| | ||||||||||| |||||    
T  21668919 gagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttt 21668985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 24827890 - 24827824
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||| ||||||| ||||||||| ||| ||| |||||||||||| |||||| ||||||||||    
T  24827890 gagacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggaccaaccaaagtgggttt 24827824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 17618346 - 17618281
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||  |||  ||||||||||||    
T  17618346 gagacctcgaggaggagcacactcccaggtctcaagccaataccaccaagccggcccaagtgggtt 17618281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 39509135 - 39509070
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||   | ||||||||||||||||    
T  39509135 gagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 47044782 - 47044717
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| |||||||| |||| ||||||| ||| |||||||||| |||||| |||||||||||    
T  47044782 gagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 28635760 - 28635696
Alignment:
Q  21 agacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| | ||||||||||||||||||| ||||| || ||||||| || |||||||||||||||    
T  28635760 agacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 37720227 - 37720291
Alignment:
Q  22 gacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||| || |||| |||||||||||| ||| ||||||||| |||| |||||||||||||||||||    
T  37720227 gaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggttt 37720291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 12798746 - 12798683
Alignment:
Q  23 acctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| ||| |||||||||||||||| ||| ||||||||||  || ||||||||||||||||    
T  12798746 acctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggttt 12798683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 29195149 - 29195094
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||||||| || ||| ||||||| |||||| |||||||||||||||||||    
T  29195149 gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggttt 29195094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 52054061 - 52054014
Alignment:
Q  37 cacactcccagatccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||||||||||| ||||| |||||  ||||||||||||||||    
T  52054061 cacactcccagatccaagtcaatatcaccgtaccaacccaagtgggtt 52054014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 37443756 - 37443702
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||| |||||||||||||| |||||||||||||  || |||||||||||||||    
T  37443756 gaggagtacactcccagatcccaagccaataccactaggtcaacccaagtgggtt 37443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 41346974 - 41347036
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgg 81  Q
    ||||| |||| |||||||| ||||||||||| ||| ||||||||| | |||||||||||||||    
T  41346974 gagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 46545765 - 46545711
Alignment:
Q  31 gaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||| ||| || ||||||||||||||  ||||||||||||||||||    
T  46545765 gaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 49576905 - 49576963
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatccaa-gccaataccaccgggccaacccaa 77  Q
    ||||||| || ||||||||||||||||  ||||| |||||||||||| |||||||||||    
T  49576905 gagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 38869833 - 38869788
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccac 64  Q
    ||||||| || ||||||||||||||||||| |||||||||||||||    
T  38869833 gagaccttgaggaggagcacactcccagatcccaagccaataccac 38869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 51948545 - 51948480
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| |||| ||||||||| |||||| ||| |||||| ||| || |||||||||||||||    
T  51948545 gagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 8325391 - 8325455
Alignment:
Q  21 agacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||| || || ||||||||||| || || |||||||| |||||||| ||||||||||||||||    
T  8325391 agaccttgaggatgagcacactccaaggtctcaagccaacaccaccggcccaacccaagtgggtt 8325455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 19229219 - 19229283
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| |||||||||| ||  ||  ||| |||||||||||| ||||||||||| ||||||    
T  19229219 gagacctcgaggaggagcacattctaagtcccaggccaataccaccaggccaacccaaatgggtt 19229283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 33619270 - 33619206
Alignment:
Q  21 agacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| | ||||| ||| ||||||||||| ||||||||||||||  | |||||||||||||||    
T  33619270 agacctcaaggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgggtt 33619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 40285687 - 40285623
Alignment:
Q  21 agacctcgatgaggagcacactcccaga-tccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| | |||||||||||||||||| |||||  ||||||||||  |||||| ||||||||||    
T  40285687 agacctcaaagaggagcacactcccagattccaaatcaataccaccatgccaactcaagtgggtt 40285623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 11593 - 11534
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaag 78  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  11593 gagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 30109319 - 30109385
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||| | ||||||||||||||||| || |||||||||||||||  ||||||||||||||||||    
T  30109319 gagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggttt 30109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 14495816 - 14495881
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||| | ||||||||| ||||||    
T  14495816 gagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 25627122 - 25627057
Alignment:
Q  20 gagacctcgatgaggagcacactccca-gatccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||||||||||| | ||||||||||||||||  ||||||||||||||||||    
T  25627122 gagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 29075846 - 29075781
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||| ||||| ||||||||||||||||||| |||||||||||||||  ||| ||||||||||||||    
T  29075846 gagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 6844793 - 6844729
Alignment:
Q  21 agacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||| ||||| |||||||||| || ||||| |||||||||| ||||||||||||||||||    
T  6844793 agacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaacccaagtgggtt 6844729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 34984870 - 34984803
Alignment:
Q  21 agacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtttgg 87  Q
    |||||| || ||||||||||||||||| | |||||||||||||||  | |||||||||||||||||||    
T  34984870 agaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtttgg 34984803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 87434 - 87500
Alignment:
Q  20 gagacctcgatgaggagcacactcccaga-tccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || |||||||||||||||||| |||||| |||||||||  |||||||| ||||||||||    
T  87434 gagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggttt 87500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 14285226 - 14285160
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || ||||||||||||||||| | |||||||||| ||||  |||||||||||||||||||    
T  14285226 gagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggttt 14285160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 21549159 - 21549213
Alignment:
Q  31 gaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||    
T  21549159 gaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 30883209 - 30883275
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || ||||||||||||||||| ||| |||||||||||||  | |||||||||||||||||    
T  30883209 gagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggttt 30883275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 16436682 - 16436617
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatccaagccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| || |||||||||||||| ||  |||||||||||||||  |||||||||||||| ||||    
T  16436682 gagaccttgaggaggagcacactccaagtcccaagccaataccactaggccaacccaagtgagttt 16436617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 16457875 - 16457810
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || |||||||||||||| || ||| |||||||||||||| |||||||| |||||||||    
T  16457875 gagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 16773872 - 16773807
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| ||||||||||||||||| | ||||| |||||||||| | ||||| ||||||||||    
T  16773872 gagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 21589353 - 21589288
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||| |||| ||| |||| |||||||| ||| |||||||||||||| ||||||||||||||||||    
T  21589353 gagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 26598579 - 26598523
Alignment:
Q  30 tgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggttt 85  Q
    |||||||||||||| ||||||| |||||||||||||  |||||| ||||||||||||    
T  26598579 tgaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggttt 26598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 29692408 - 29692464
Alignment:
Q  31 gaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtttg 86  Q
    ||||||||||||||||||| |||| ||||||||||| | ||||||||| ||||||||    
T  29692408 gaggagcacactcccagatcccaatccaataccaccagaccaacccaaatgggtttg 29692464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 1410670 - 1410728
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaa 77  Q
    |||||||||| |||||||||||||||| || ||||| |||||||||| | |||||||||    
T  1410670 gagacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 8278286 - 8278351
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    |||| ||||| ||||||||||||||||  ||| |||||||||||| | | ||||||||||||||||    
T  8278286 gagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 7918481 - 7918545
Alignment:
Q  21 agacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||| || ||||||  ||||||||| | |||||||||||||||  ||||||||||||||||||    
T  7918481 agaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 2481 - 2546
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| || ||||||||||||||||||||| || ||||||||||||| ||||||||| ||||||    
T  2481 gagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaaatgggtt 2546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 41644 - 41709
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||||||| |||||||| |||| |||||| ||||||||||||||  ||||||||||||||||||    
T  41644 gagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 112346 - 112282
Alignment:
Q  21 agacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    ||||||| | ||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  112346 agacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaacccaagtgggtt 112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 94982 - 95044
Alignment:
Q  20 gagacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgg 81  Q
    ||||||| || ||||||||||||||||| | |||||||||||||||  |||||||||||||||    
T  94982 gagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 13057 - 13118
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaagtg 80  Q
    ||||||| || |||||||||||||||||||| |||||||||||||||  ||||||| |||||    
T  13057 gagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 157000 - 157056
Alignment:
Q  22 gacctcgatgaggagcacactcccagatc-caagccaataccaccgggccaacccaa 77  Q
    |||||||| |||||||||||||||||||| ||||||||||||| | || ||||||||    
T  157000 gacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaa 157056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 851 - 910
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaag 78  Q
    ||||| |||| |||||||||| |||||||||| |||||||||||||| ||||| ||||||    
T  851 gagacttcgaggaggagcacattcccagatcccaagccaataccaccaggccaccccaag 910  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 32791 - 32846
Alignment:
Q  31 gaggagcacactcccagatcca-agccaataccaccgggccaacccaagtgggttt 85  Q
    ||||||| ||| |||||||||  ||||||||||||| |||||||||||||||||||    
T  32791 gaggagcgcacccccagatcctcagccaataccaccaggccaacccaagtgggttt 32846  T

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Target: scaffold0172; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 15788 - 15856
Alignment:
Q  20 gagacctcgatgaggagcacactcccagatcc-aagccaataccaccgggccaacccaagtgggtttgg 87  Q
    ||||||| || |||||||| ||||| | |||| |||||||||||||| |||||||  ||||||||||||    
T  15788 gagaccttgaggaggagcatactccaaaatcccaagccaataccaccaggccaacttaagtgggtttgg 15856  T

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Target: scaffold0417 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 10265 - 10216
Alignment:
Q  39 cactcccagatcc-aagccaataccaccgggccaacccaagtgggtttgg 87  Q
    ||||||||||||| ||||||||| || | |||||||||||||||||||||    
T  10265 cactcccagatcccaagccaatatcatcaggccaacccaagtgggtttgg 10216  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 35401 - 35465
Alignment:
Q  21 agacctcgatgaggagcacactcccagat-ccaagccaataccaccgggccaacccaagtgggtt 84  Q
    |||||| || |||||||| ||||| |||| ||||||||||||||| |||| |||| |||||||||    
T  35401 agaccttgaggaggagcatactcctagattccaagccaataccactgggcaaaccgaagtgggtt 35465  T

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