View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5477-Insertion-7 (Length: 78)
Name: NF5477-Insertion-7
Description: NF5477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5477-Insertion-7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 70; Significance: 3e-32; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-32
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 35244893 - 35244966
Alignment:
| Q |
5 |
acaattttatcaggaacatttctccttcacaagacaaaagatatgggaaataaacaacccgaacaatctcctgc |
78 |
Q |
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| T |
35244893 |
acaattttatcaggaacatttctccttcacaagacaaaagatatgggaaataaaccacccgaacaatctcctgc |
35244966 |
T |
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Target: chr3 (Bit Score: 31; Significance: 0.000000006; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 37890163 - 37890109
Alignment:
| Q |
5 |
acaattttatcaggaacatttctccttcacaagacaaaagatatgggaaataaac |
59 |
Q |
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||||||||||| || ||||| ||||||||||| || || |||||||||||||||| |
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| T |
37890163 |
acaattttatctgggacattcctccttcacaaaactaaggatatgggaaataaac |
37890109 |
T |
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