View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5477_high_3 (Length: 367)

Name: NF5477_high_3
Description: NF5477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5477_high_3
NF5477_high_3
[»] chr7 (58 HSPs)
chr7 (1-353)||(21202898-21203252)
chr7 (19-252)||(41469482-41469717)
chr7 (27-250)||(34012697-34012917)
chr7 (19-173)||(47541036-47541197)
chr7 (19-143)||(37544869-37544992)
chr7 (19-173)||(40863120-40863281)
chr7 (19-173)||(20493436-20493597)
chr7 (19-151)||(40304860-40304999)
chr7 (19-173)||(29042629-29042790)
chr7 (19-173)||(242247-242408)
chr7 (19-173)||(42435696-42435857)
chr7 (19-85)||(12846722-12846788)
chr7 (19-85)||(47011152-47011218)
chr7 (19-173)||(7883160-7883321)
chr7 (19-70)||(30172899-30172950)
chr7 (19-70)||(45869554-45869605)
chr7 (19-151)||(48613593-48613732)
chr7 (19-173)||(43777030-43777191)
chr7 (29-151)||(19474941-19475070)
chr7 (34-173)||(10594747-10594893)
chr7 (19-173)||(25226180-25226340)
chr7 (22-83)||(39597016-39597077)
chr7 (19-174)||(19020537-19020695)
chr7 (51-131)||(40524822-40524902)
chr7 (19-70)||(25236121-25236172)
chr7 (25-150)||(36688003-36688136)
chr7 (90-174)||(45236499-45236583)
chr7 (22-185)||(25066039-25066197)
chr7 (89-131)||(22114118-22114160)
chr7 (89-131)||(40525281-40525323)
chr7 (42-173)||(24981590-24981728)
chr7 (19-62)||(21278346-21278389)
chr7 (19-62)||(25877503-25877546)
chr7 (19-62)||(38283009-38283052)
chr7 (34-85)||(43501497-43501548)
chr7 (19-62)||(47778848-47778891)
chr7 (19-60)||(7791579-7791620)
chr7 (19-60)||(7901166-7901207)
chr7 (19-60)||(8215007-8215048)
chr7 (19-60)||(10533341-10533382)
chr7 (19-60)||(19699720-19699761)
chr7 (19-60)||(26015180-26015221)
chr7 (19-60)||(27325565-27325606)
chr7 (19-60)||(32541474-32541515)
chr7 (19-60)||(35924830-35924871)
chr7 (19-60)||(38875440-38875481)
chr7 (19-60)||(39073734-39073775)
chr7 (19-60)||(40704800-40704841)
chr7 (19-60)||(40995888-40995929)
chr7 (19-60)||(42094844-42094885)
chr7 (19-60)||(43246321-43246362)
chr7 (19-60)||(46321402-46321443)
chr7 (19-60)||(46924603-46924644)
chr7 (19-60)||(47065230-47065271)
chr7 (19-59)||(21873839-21873879)
chr7 (17-85)||(25765642-25765710)
chr7 (19-59)||(40994194-40994234)
chr7 (22-70)||(48873720-48873768)
[»] chr4 (57 HSPs)
chr4 (19-260)||(15506342-15506584)
chr4 (19-174)||(1536814-1536967)
chr4 (19-257)||(7818225-7818456)
chr4 (20-173)||(1523543-1523703)
chr4 (19-173)||(37829615-37829776)
chr4 (19-85)||(3025561-3025627)
chr4 (22-173)||(36852415-36852573)
chr4 (19-173)||(32933370-32933531)
chr4 (19-173)||(43457550-43457711)
chr4 (21-151)||(47428986-47429123)
chr4 (19-151)||(50469767-50469905)
chr4 (19-173)||(51323235-51323396)
chr4 (19-151)||(43620901-43621040)
chr4 (19-173)||(13961629-13961790)
chr4 (19-173)||(35338886-35339047)
chr4 (19-173)||(47466704-47466865)
chr4 (25-120)||(1488415-1488509)
chr4 (19-173)||(10480572-10480733)
chr4 (19-85)||(3027287-3027353)
chr4 (19-85)||(30215052-30215118)
chr4 (19-97)||(32136179-32136257)
chr4 (19-173)||(11691574-11691735)
chr4 (22-158)||(7795189-7795316)
chr4 (22-151)||(34160097-34160233)
chr4 (19-70)||(8713950-8714001)
chr4 (19-85)||(48594-48660)
chr4 (19-85)||(24035305-24035371)
chr4 (42-188)||(42130970-42131116)
chr4 (19-173)||(20292570-20292731)
chr4 (19-151)||(37682553-37682692)
chr4 (197-257)||(7794922-7794982)
chr4 (34-85)||(7318973-7319024)
chr4 (42-173)||(22847695-22847833)
chr4 (19-70)||(24897643-24897694)
chr4 (19-70)||(51320654-51320705)
chr4 (19-173)||(40430988-40431150)
chr4 (42-173)||(41201626-41201764)
chr4 (19-62)||(1356399-1356442)
chr4 (19-62)||(10541462-10541505)
chr4 (19-57)||(56017795-56017833)
chr4 (19-60)||(614530-614571)
chr4 (19-60)||(5098729-5098770)
chr4 (19-60)||(19873434-19873475)
chr4 (19-60)||(20434812-20434853)
chr4 (19-60)||(20738447-20738488)
chr4 (19-60)||(23894542-23894583)
chr4 (19-60)||(37233519-37233560)
chr4 (19-60)||(38291239-38291280)
chr4 (19-60)||(39539814-39539855)
chr4 (19-60)||(42349400-42349441)
chr4 (19-60)||(43829601-43829642)
chr4 (19-60)||(46563830-46563871)
chr4 (41-70)||(48991237-48991266)
chr4 (19-60)||(52839069-52839110)
chr4 (19-60)||(52912507-52912548)
chr4 (19-60)||(53874391-53874432)
chr4 (19-60)||(56363403-56363444)
[»] chr3 (44 HSPs)
chr3 (23-243)||(31608167-31608387)
chr3 (19-188)||(23483160-23483329)
chr3 (19-173)||(35232916-35233077)
chr3 (19-173)||(48585370-48585531)
chr3 (19-173)||(49779046-49779207)
chr3 (22-151)||(50507717-50507845)
chr3 (22-173)||(36231836-36231994)
chr3 (19-173)||(38144423-38144584)
chr3 (19-173)||(52343519-52343680)
chr3 (19-173)||(19942324-19942485)
chr3 (19-71)||(4595730-4595782)
chr3 (19-173)||(24200194-24200355)
chr3 (19-151)||(41589447-41589586)
chr3 (19-70)||(52813783-52813834)
chr3 (19-85)||(2612504-2612570)
chr3 (90-261)||(24989776-24989943)
chr3 (34-173)||(44353585-44353731)
chr3 (19-151)||(18167890-18168024)
chr3 (19-173)||(28411992-28412153)
chr3 (34-173)||(30419427-30419573)
chr3 (103-188)||(47097656-47097741)
chr3 (104-188)||(8947233-8947317)
chr3 (19-71)||(33393246-33393298)
chr3 (19-62)||(8947146-8947189)
chr3 (34-173)||(7680419-7680565)
chr3 (22-173)||(35154963-35155120)
chr3 (19-173)||(14279596-14279757)
chr3 (19-97)||(54556913-54556988)
chr3 (17-60)||(4515349-4515392)
chr3 (19-62)||(20049007-20049050)
chr3 (19-58)||(26091048-26091087)
chr3 (19-62)||(40585469-40585512)
chr3 (19-60)||(6267649-6267690)
chr3 (19-60)||(7149313-7149354)
chr3 (19-60)||(10840740-10840781)
chr3 (19-60)||(20834857-20834898)
chr3 (19-60)||(22781155-22781196)
chr3 (19-60)||(25711628-25711669)
chr3 (19-60)||(33967619-33967660)
chr3 (19-60)||(36431016-36431057)
chr3 (19-60)||(37971019-37971060)
chr3 (19-60)||(38871825-38871866)
chr3 (19-60)||(41070584-41070625)
chr3 (19-60)||(53974972-53975013)
[»] scaffold0570 (1 HSPs)
scaffold0570 (19-188)||(3785-3954)
[»] chr6 (27 HSPs)
chr6 (19-173)||(6675173-6675330)
chr6 (32-188)||(17314892-17315048)
chr6 (19-173)||(29622654-29622815)
chr6 (19-151)||(5715547-5715685)
chr6 (19-173)||(11368113-11368274)
chr6 (19-173)||(31090525-31090686)
chr6 (32-184)||(26947151-26947302)
chr6 (19-188)||(18024760-18024935)
chr6 (69-247)||(14253130-14253305)
chr6 (19-97)||(32172977-32173055)
chr6 (19-173)||(8525891-8526052)
chr6 (19-188)||(7082125-7082292)
chr6 (23-188)||(8810068-8810231)
chr6 (19-70)||(29880705-29880756)
chr6 (19-173)||(6926488-6926649)
chr6 (77-185)||(24418794-24418902)
chr6 (19-84)||(34085037-34085102)
chr6 (17-151)||(13444510-13444651)
chr6 (19-67)||(34084782-34084830)
chr6 (22-149)||(26181062-26181191)
chr6 (19-60)||(6626033-6626074)
chr6 (19-62)||(29629843-29629886)
chr6 (200-261)||(6675358-6675417)
chr6 (17-62)||(3095245-3095290)
chr6 (19-60)||(25331652-25331693)
chr6 (19-60)||(25332231-25332272)
chr6 (19-60)||(29121709-29121750)
[»] chr2 (32 HSPs)
chr2 (36-174)||(35006306-35006444)
chr2 (19-174)||(31639786-31639949)
chr2 (19-173)||(38628320-38628481)
chr2 (19-173)||(4330785-4330946)
chr2 (19-173)||(13479721-13479882)
chr2 (19-173)||(10522291-10522451)
chr2 (19-85)||(16312876-16312942)
chr2 (19-173)||(44456097-44456258)
chr2 (19-173)||(8034016-8034177)
chr2 (19-151)||(4072645-4072784)
chr2 (19-85)||(10554221-10554287)
chr2 (19-173)||(7721793-7721950)
chr2 (19-85)||(44799417-44799483)
chr2 (19-85)||(45442912-45442978)
chr2 (19-60)||(37094763-37094804)
chr2 (19-70)||(932126-932177)
chr2 (19-62)||(10639434-10639477)
chr2 (19-60)||(927698-927739)
chr2 (19-60)||(1482566-1482607)
chr2 (19-60)||(3178940-3178981)
chr2 (19-60)||(13195532-13195573)
chr2 (19-60)||(15012492-15012533)
chr2 (19-60)||(25852731-25852772)
chr2 (19-60)||(32550956-32550997)
chr2 (19-60)||(34203004-34203045)
chr2 (19-60)||(35896455-35896496)
chr2 (19-60)||(43577632-43577673)
chr2 (19-60)||(44144109-44144150)
chr2 (111-151)||(31569041-31569081)
chr2 (19-59)||(39697157-39697197)
chr2 (103-151)||(40658643-40658691)
chr2 (54-186)||(43653012-43653144)
[»] chr8 (55 HSPs)
chr8 (19-188)||(35979349-35979518)
chr8 (19-248)||(1848320-1848551)
chr8 (19-250)||(32910951-32911184)
chr8 (19-173)||(38459289-38459450)
chr8 (19-173)||(42687132-42687293)
chr8 (19-173)||(38946484-38946645)
chr8 (19-173)||(44026278-44026439)
chr8 (19-85)||(31792988-31793054)
chr8 (19-85)||(44025484-44025550)
chr8 (19-188)||(44696233-44696408)
chr8 (19-173)||(4006453-4006614)
chr8 (19-173)||(44703984-44704145)
chr8 (22-151)||(38167764-38167900)
chr8 (19-85)||(6363-6429)
chr8 (19-151)||(35329021-35329160)
chr8 (19-151)||(39713293-39713432)
chr8 (19-97)||(28152155-28152233)
chr8 (19-85)||(33772069-33772135)
chr8 (34-173)||(12723116-12723260)
chr8 (19-97)||(40184678-40184756)
chr8 (19-58)||(43576105-43576144)
chr8 (87-260)||(44953582-44953757)
chr8 (107-188)||(7988119-7988200)
chr8 (19-173)||(41941314-41941475)
chr8 (42-173)||(4230075-4230213)
chr8 (34-151)||(36056917-36057041)
chr8 (79-174)||(26991901-26991996)
chr8 (19-85)||(5346827-5346893)
chr8 (34-151)||(38235144-38235268)
chr8 (103-176)||(7969383-7969456)
chr8 (29-151)||(11266836-11266965)
chr8 (19-60)||(23356634-23356675)
chr8 (19-60)||(35606040-35606081)
chr8 (115-260)||(16636053-16636189)
chr8 (78-166)||(43576177-43576264)
chr8 (19-62)||(3136575-3136618)
chr8 (19-62)||(12713470-12713513)
chr8 (19-62)||(26294491-26294534)
chr8 (19-62)||(26307748-26307791)
chr8 (19-56)||(2827604-2827641)
chr8 (19-60)||(5599225-5599266)
chr8 (19-60)||(5636009-5636050)
chr8 (19-60)||(8376920-8376961)
chr8 (19-60)||(11588801-11588842)
chr8 (19-60)||(15840494-15840535)
chr8 (19-60)||(17602348-17602389)
chr8 (19-60)||(26290111-26290152)
chr8 (19-60)||(26303368-26303409)
chr8 (19-60)||(26315362-26315403)
chr8 (19-60)||(34564396-34564437)
chr8 (19-60)||(34918137-34918178)
chr8 (19-60)||(39365983-39366024)
chr8 (50-186)||(16584500-16584635)
chr8 (19-59)||(24822066-24822106)
chr8 (19-59)||(43663683-43663723)
[»] chr1 (47 HSPs)
chr1 (32-174)||(45926095-45926238)
chr1 (19-141)||(9263494-9263616)
chr1 (19-173)||(6015849-6016010)
chr1 (19-85)||(32562198-32562264)
chr1 (19-173)||(17475063-17475224)
chr1 (19-173)||(48933966-48934127)
chr1 (19-173)||(51001267-51001428)
chr1 (19-173)||(8113108-8113269)
chr1 (19-151)||(32117308-32117447)
chr1 (19-85)||(9639981-9640047)
chr1 (19-85)||(13073885-13073951)
chr1 (19-97)||(24526994-24527074)
chr1 (19-173)||(26308254-26308415)
chr1 (19-85)||(3486458-3486524)
chr1 (19-97)||(7009723-7009801)
chr1 (19-150)||(45942139-45942277)
chr1 (19-151)||(5673571-5673710)
chr1 (19-173)||(23443532-23443693)
chr1 (19-151)||(17702699-17702838)
chr1 (19-70)||(24663574-24663625)
chr1 (22-173)||(29921125-29921283)
chr1 (103-188)||(1441980-1442065)
chr1 (19-173)||(40499220-40499381)
chr1 (42-151)||(1702508-1702624)
chr1 (34-173)||(19247150-19247296)
chr1 (45-131)||(51547053-51547139)
chr1 (19-185)||(19513452-19513625)
chr1 (42-173)||(32087164-32087302)
chr1 (19-151)||(46290958-46291096)
chr1 (42-173)||(41713518-41713656)
chr1 (22-97)||(1701390-1701462)
chr1 (19-62)||(40400723-40400766)
chr1 (19-60)||(2137713-2137754)
chr1 (19-60)||(2482004-2482045)
chr1 (19-60)||(6653809-6653850)
chr1 (19-60)||(11172697-11172738)
chr1 (19-60)||(13234673-13234714)
chr1 (19-60)||(15941543-15941584)
chr1 (19-60)||(18909874-18909915)
chr1 (19-60)||(24317879-24317920)
chr1 (19-60)||(26163873-26163914)
chr1 (19-60)||(34270115-34270156)
chr1 (19-60)||(34276350-34276391)
chr1 (19-60)||(39568729-39568770)
chr1 (19-60)||(39983070-39983111)
chr1 (19-60)||(40536000-40536041)
chr1 (19-71)||(12602696-12602748)
[»] chr5 (35 HSPs)
chr5 (29-128)||(6733389-6733487)
chr5 (19-173)||(7339532-7339693)
chr5 (19-173)||(24478141-24478302)
chr5 (19-173)||(37106737-37106898)
chr5 (19-173)||(10665367-10665528)
chr5 (22-173)||(18865288-18865446)
chr5 (22-173)||(40739881-40740039)
chr5 (19-173)||(6245972-6246133)
chr5 (19-85)||(13210251-13210317)
chr5 (19-85)||(41881084-41881150)
chr5 (19-173)||(4621905-4622066)
chr5 (19-173)||(10552907-10553068)
chr5 (19-83)||(36294684-36294748)
chr5 (19-97)||(27309724-27309802)
chr5 (19-85)||(37274003-37274069)
chr5 (19-173)||(15271909-15272070)
chr5 (19-91)||(3123501-3123573)
chr5 (19-70)||(18522833-18522884)
chr5 (34-173)||(42436551-42436697)
chr5 (42-97)||(43547819-43547874)
chr5 (45-151)||(8233313-8233426)
chr5 (21-70)||(31485478-31485526)
chr5 (19-64)||(31499649-31499694)
chr5 (34-173)||(18979186-18979332)
chr5 (34-151)||(37341576-37341700)
chr5 (19-173)||(38769011-38769175)
chr5 (19-62)||(43517636-43517679)
chr5 (34-68)||(8048053-8048087)
chr5 (19-60)||(4155488-4155529)
chr5 (19-60)||(6469047-6469088)
chr5 (19-52)||(15021205-15021238)
chr5 (19-60)||(33281552-33281593)
chr5 (19-60)||(38759738-38759779)
chr5 (19-60)||(43293027-43293068)
chr5 (42-70)||(12188600-12188628)
[»] scaffold0672 (1 HSPs)
scaffold0672 (19-151)||(6869-7008)
[»] scaffold0847 (1 HSPs)
scaffold0847 (19-173)||(149-310)
[»] scaffold0855 (1 HSPs)
scaffold0855 (19-151)||(6-145)
[»] scaffold0007 (2 HSPs)
scaffold0007 (19-84)||(200668-200733)
scaffold0007 (19-60)||(156438-156479)
[»] scaffold0003 (1 HSPs)
scaffold0003 (19-151)||(365137-365274)
[»] scaffold0578 (1 HSPs)
scaffold0578 (19-85)||(9420-9486)
[»] scaffold0438 (1 HSPs)
scaffold0438 (19-60)||(1448-1489)
[»] scaffold0391 (1 HSPs)
scaffold0391 (19-60)||(4712-4753)
[»] scaffold0062 (1 HSPs)
scaffold0062 (19-60)||(41227-41268)


Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 21202898 - 21203252
Alignment:
Q  1 caaaagtgcaattaagcctttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatgg 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||   | |||||||||| ||||| ||||||| ||||||||||||||    
T  21202898 caaaagtgcaattaaacctttatataaattttcttaaaaccttaatttcattcatttaaattctaaaatttcacactatttcacccacaaacaatcatgg 21202997  T
Q  101 acgttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctta-nnnnnnncaa 199  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||        |||    
T  21202998 acgttcaatcaatctctatagaatattaaataataaatcaaaacatctttcatctatactctattgcatataagtaattgaatttcttattctttttcaa 21203097  T
Q  200 tgatgctagagtttctattttattcttgttgttcaatgttgatatgttatgcagtttacaataggatagagatgtatattaaagttg-aannnnnnnaac 298  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||       |||    
T  21203098 tgatgcaagagtttctattttattcttgttgttcaacgttgatatgttatgcactttacaataggatagagatgtatattaaagttgaaatttttttaac 21203197  T
Q  299 tatattattaaaatcagttgatccaaatatatattaaaatagagatgtaaccact 353  Q
    ||| || |||||||||||| |||||||||||||||||||||||||||||||||||    
T  21203198 tattttcttaaaatcagttaatccaaatatatattaaaatagagatgtaaccact 21203252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 41469482 - 41469717
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctcta 118  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||  ||||||||| ||| | ||||||||||||||||    
T  41469482 tttatataaattttcttaaaactttgatttcattcattgttactctaaaattttaccctctttcacatacaaacaattatgaatgttcaatcaatctcta 41469581  T
Q  119 tagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttct--tannnnnnncaatgatgctagagtttcta 216  Q
    ||||| |||||||  | |||||||||||||||| || |||  |  ||||||||||  || |||||||||  |         ||||||||||||||||| |    
T  41469582 tagaagattaaagggtgaatcaaaacatctttcatccatattcggttgcatataaataagtgaatttcttcttctttttcaaatgatgctagagtttcca 41469681  T
Q  217 ttttattcttgttgttcaatgttgatatgttatgca 252  Q
    | || || ||||||||||| ||||||||| ||||||    
T  41469682 tattttttttgttgttcaacgttgatatgctatgca 41469717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 34012697 - 34012917
Alignment:
Q  27 aattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatat 126  Q
    |||||| ||| ||||||||| ||||||||| | | |||||||||| |  | ||| |||| |||||||||||| || |||||||||||||||||| || ||    
T  34012697 aatttttttataaccttgatctcattcattattattctaaaatttcatccgcttacacccacaaacaatcatagatgttcaatcaatctctataaaagat 34012796  T
Q  127 taaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttcttannnnnnncaatgatgctagagtttctattttattctt 226  Q
    |||||| | |||||||||||||| | || |||  |||||||||||||| |  |   ||||||        |||||||| ||||||||||||||| |||||    
T  34012797 taaagagtgaatcaaaacatcttccatccatattctattgcatataagtacgtttttttctt---tctttcaatgatgttagagtttctatttttttctt 34012893  T
Q  227 gttgttcaatgttgatatgttatg 250  Q
    ||||||||| ||||||||||||||    
T  34012894 gttgttcaacgttgatatgttatg 34012917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 47541197 - 47541036
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||        | ||||||||| | || |||||||     
T  47541197 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 47541099  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| |||||||||||||||||| |  |||| | |||||||||||    
T  47541098 aatctctatggaagattaaagagtaaatcaaaacatctttcattcatactcgattgcatataa 47541036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 37544992 - 37544869
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctcta 118  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||||||| || |||||||||| | ||||||| ||||| |||||||||||| |||    
T  37544992 tttatataaattttcttcaaac-ttgatttcattcattgttactctaaaatttcaccctctttcacccataaacaattatggatgttcaatcaatcacta 37544894  T
Q  119 tagaatattaaagaataaatcaaaa 143  Q
    || || |||||||| | ||||||||    
T  37544893 taaaagattaaagagtgaatcaaaa 37544869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 40863281 - 40863120
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||        | ||||||||| | || |||||||     
T  40863281 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcacactctttcacccaccaacgatcaaacaatcct-gatgttcaatt 40863183  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||  | |||||||||||||||| |  |||| | |||||||||||    
T  40863182 aatctctatggaagattaaagcgtgaatcaaaacatctttcattcatactcgattgcatataa 40863120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 20493597 - 20493436
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || ||||||||||        | ||||||||| | || |||||||     
T  20493597 tttatataaattttcttaaaatcttaatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 20493499  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  20493498 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 20493436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 40304860 - 40304999
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || |||||||||| || ||| ||||       | || ||||||| |    
T  40304860 tttatataaattttcttaaaatcttgatttcattcatggtcactctaaaatttcactctctttcacccaccaacgatcaaacaattttgatgttcaatta 40304959  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    |||||||| ||| |||||||| | ||||||||||||||||    
T  40304960 atctctatggaagattaaagagtgaatcaaaacatctttc 40304999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 29042790 - 29042629
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||  || |||||||||| || ||||||||         || ||||||| |    
T  29042790 tttatataaattatcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacaatcaaacaatcctgatgttcaatta 29042691  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  29042690 atctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 29042629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 242408 - 242247
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  242408 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 242310  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||| ||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  242309 aatctttatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 242247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 42435696 - 42435857
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||||| || ||||||||||        | ||||||||||| ||  ||||||     
T  42435696 tttatataaatttttttaaaatcttaatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcat-gatattcaatt 42435794  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  42435795 aatctctatcgaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 42435857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 12846722 - 12846788
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  12846722 tttatataaatttttttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacc 12846788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 47011218 - 47011152
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || || |||||||    
T  47011218 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctttttcacc 47011152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 7883160 - 7883321
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  7883160 tttatataaattttcttaagatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 7883258  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||| ||||||| |  |||| | |||||||||||    
T  7883259 aatctctatggaagattaaagagtgaatcaaaaaatctttcattgatactcgattgcatataa 7883321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 30172899 - 30172950
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30172899 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatt 30172950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 45869554 - 45869605
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45869554 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatt 45869605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 48613732 - 48613593
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaac--------aaacaatcatggacgttcaatc 110  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||| || || ||||||| ||        |||||||||| || |||||||     
T  48613732 tttatataaattttcataaaatcttgatttgattcattgtcactctaaaatttcactctttttcacccaccaacgattaaacaatcat-gatgttcaatt 48613634  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||||||| ||| |||||||| | |||||||| |||||||    
T  48613633 aatctctatggaagattaaagagtgaatcaaaatatctttc 48613593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 43777191 - 43777030
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttc--------accaacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||  || |||||||        || | ||||||||| | || |||||||     
T  43777191 tttatataaatttttttaaaatcttgatttcattcattttcactctaaaattccactctctttctcccatcaacgatcaaacaatcct-gatgttcaatt 43777093  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||||||| |||||||| | ||||||||||| |||| |  |||| | |||||||||||    
T  43777092 aatctctatagaagattaaagagtgaatcaaaacatttttcattcatactcgattgcatataa 43777030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 19475070 - 19474941
Alignment:
Q  29 ttttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatcaatctctatag 121  Q
    |||| |||||| ||| ||||||||||||||||||||||||||  |  |||||||||| |||||| || |       | || ||||||||||||||||| |    
T  19475070 tttttttaaaatctttatttcattcattgtcactctaaaattccaatctctttcacccacaaacgataaaagaatcttgatgttcaatcaatctctatgg 19474971  T
Q  122 aatattaaagaataaatcaaaacatctttc 151  Q
    || |||||||||| ||||||||||||||||    
T  19474970 aagattaaagaatgaatcaaaacatctttc 19474941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 10594893 - 10594747
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaatctctatagaata 125  Q
    |||||| ||||||||||||||||||||| ||||||||| || ||||||||||        | ||||||||| | || ||||||| ||||||||| ||| |    
T  10594893 ttaaaatcttgatttcattcattgtcacactaaaatttcactctctttcacccaccaacgatcaaacaatcct-gatgttcaattaatctctatggaaga 10594795  T
Q  126 ttaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  10594794 ttaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 10594747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 25226340 - 25226180
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||| ||||| ||||||||||  |  ||||||||||        | ||||||||| | || |||||||     
T  25226340 tttatataaattttcttaaaatcttgatttcattccttgtcgctctaaaattcca-tctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 25226243  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  25226242 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 25226180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 39597016 - 39597077
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttca 83  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||||| || ||||||||    
T  39597016 atataaattttcttaaaatcttgattttattcattatcactctaaaatttcactctctttca 39597077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 19020537 - 19020695
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca------tggacgttcaatcaa 112  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||   | ||| ||  ||||||||| |||| | ||||        || ||||||||||    
T  19020537 tttatataaattttcttaaaacattgattttattcattgtcactc---agtttcaccatctttcacccacaagcgatcaaacaatctgatgttcaatcaa 19020633  T
Q  113 tctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataag 174  Q
    | ||||| ||| |||||||| | |||||||||||||||| || |||| | ||||||||||||    
T  19020634 tttctatggaagattaaagagtgaatcaaaacatctttcatccatactcgattgcatataag 19020695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 40524902 - 40524822
Alignment:
Q  51 ttcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaag 131  Q
    |||||| || ||||||||||| ||  | ||||||| ||||||||||||||| ||||||||||||||| ||||| |||||||    
T  40524902 ttcattatcgctctaaaatttcaccatttttcacccacaaacaatcatggatgttcaatcaatctctgtagaagattaaag 40524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 25236172 - 25236121
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    ||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  25236172 tttatataaattttcttaaaatcttgatttcattccttgtcgctctaaaatt 25236121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 36688003 - 36688136
Alignment:
Q  25 taaattttcttaaaacctt-gatttcattcattgtcactctaaaattttacactcttt----caccaa----caaacaatcatggacgttcaatcaatct 115  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||| ||| ||||||    ||||||    |||||||||   || ||||||| |||||    
T  36688003 taaattttcttaaaatctttgatttcattcattctcactctaaaattctactctctttcatccaccaacgatcaaacaatc-ccgatgttcaattaatct 36688101  T
Q  116 ctatagaatattaaagaataaatcaaaacatcttt 150  Q
    |||| ||| |||||||| | |||||||||||||||    
T  36688102 ctatggaagattaaagagtgaatcaaaacatcttt 36688136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 45236499 - 45236583
Alignment:
Q  90 aacaatcatggacgttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataag 174  Q
    |||||||||||| ||||||||| |||| |||||| | || ||| | |||||||||||||||| || |||| | ||||||||||||    
T  45236499 aacaatcatggatgttcaatcactctccatagaagaatagagagtgaatcaaaacatctttcatccatactcaattgcatataag 45236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 25066039 - 25066197
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatag 121  Q
    ||||||||||| |||||||||||||||     ||||| |||||||| | | ||  |||||||||||||||||||||| ||  ||||||||||  | ||      
T  25066039 atataaatttttttaaaaccttgattt-----attgttactctaaattatcaccatctttcaccaacaaacaatcatagatattcaatcaattccaatga 25066133  T
Q  122 aatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaattt 185  Q
    || |||||||| | ||||||||| |||||  || |||  |||||||||||| | || |||||||    
T  25066134 aagattaaagagtgaatcaaaacgtcttttatccatagtctattgcatataggtaagtgaattt 25066197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 22114160 - 22114118
Alignment:
Q  89 aaacaatcatggacgttcaatcaatctctatagaatattaaag 131  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  22114160 aaacaatcatggatgttcaatcaatctctatagaagattaaag 22114118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 40525281 - 40525323
Alignment:
Q  89 aaacaatcatggacgttcaatcaatctctatagaatattaaag 131  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  40525281 aaacaatcatggatgttcaatcaatctctatagaagattaaag 40525323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 24981728 - 24981590
Alignment:
Q  42 ttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatcaatctctatagaatattaaagaat 134  Q
    |||||||||||||||||||||||||||||     |||||||||| || ||| ||||       | || ||||||| ||||||||| ||| |||||||| |    
T  24981728 ttgatttcattcattgtcactctaaaattcccttctctttcacccaccaacgatcaaacaatcttgatgttcaattaatctctatggaagattaaagagt 24981629  T
Q  135 aaatcaaaacatctttcctctatacactattgcatataa 173  Q
     |||||||||||||||| |  |||| | |||||||||||    
T  24981628 gaatcaaaacatctttcattcatactcgattgcatataa 24981590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 21278346 - 21278389
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  21278346 tttatataaattttcttaaaaccctaattttattcattgtcact 21278389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 25877546 - 25877503
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  25877546 tttatataaattttcttaaaaccctaattttattcattgtcact 25877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 38283009 - 38283052
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  38283009 tttatataaattttcttaaaaccctaattttattcattgtcact 38283052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 43501497 - 43501548
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||| |||||||||||||||||||  |||||||||| || ||||||||||    
T  43501497 ttaaaatcttgatttcattcattgtcggtctaaaatttcactctctttcacc 43501548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 47778848 - 47778891
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  47778848 tttatataaattttcttaaaaccctaattttattcattgtcact 47778891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 7791620 - 7791579
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  7791620 tttatataaattttcttaaaaccctaattttattcattgtca 7791579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 7901207 - 7901166
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  7901207 tttatataaattttcttaaaaccctaattttattcattgtca 7901166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 8215007 - 8215048
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||||| |||| || ||||||||    
T  8215007 tttatataaattttcttaaaaccttaattttatacattgtca 8215048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 10533382 - 10533341
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  10533382 tttatataaattttcttaaaaccctaattttattcattgtca 10533341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 19699761 - 19699720
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  19699761 tttatataaattttcttaaaaccctaattttattcattgtca 19699720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 26015180 - 26015221
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  26015180 tttatataaattttcttaaaaccctaattttattcattgtca 26015221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 27325606 - 27325565
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  27325606 tttatataaattttcttaaaaccataattttattcattgtca 27325565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 32541474 - 32541515
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  32541474 tttatataaattttcttaaaaccctaattttattcattgtca 32541515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 35924871 - 35924830
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  35924871 tttatataaattttcttaaaaccctaattttattcattgtca 35924830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 38875440 - 38875481
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  38875440 tttatataaattttcttaaaaccctaattttattcattgtca 38875481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 39073734 - 39073775
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  39073734 tttatataaattttcttaaaaccctaattttattcattgtca 39073775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 40704800 - 40704841
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  40704800 tttatataaattttcttaaaaccctaattttattcattgtca 40704841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 40995929 - 40995888
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  40995929 tttatataaattttcttaaaaccctaattttattcattgtca 40995888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 42094844 - 42094885
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  42094844 tttatataaattttcttaaaaccctaattttattcattgtca 42094885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 43246321 - 43246362
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  43246321 tttatataaattttcttaaaaccctaattttattcattgtca 43246362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 46321402 - 46321443
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  46321402 tttatataaattttcttaaaaccctaattttattcattgtca 46321443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 46924644 - 46924603
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  46924644 tttatataaattttcttaaaaccctaattttattcattgtca 46924603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 47065230 - 47065271
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  47065230 tttatataaattttcttaaaaccctaattttattcattgtca 47065271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 21873839 - 21873879
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtc 59  Q
    ||||||||||||||||||||||| | |||| ||||||||||    
T  21873839 tttatataaattttcttaaaaccctaattttattcattgtc 21873879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 25765710 - 25765642
Alignment:
Q  17 cctttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||| |||||  ||||||||||  |||||| ||||| |||||| | |||||||| |||||||||||||    
T  25765710 cctttttataatatttcttaaaaggttgattccattcgttgtcattttaaaatttcacactctttcacc 25765642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 40994194 - 40994234
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtc 59  Q
    ||||||||||||||||||||||| | |||| ||||||||||    
T  40994194 tttatataaattttcttaaaaccctaattttattcattgtc 40994234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 48873720 - 48873768
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    ||||||||||| ||||||  |||||||||||| |||||||| |||||||    
T  48873720 atataaatttttttaaaatgttgatttcattcgttgtcactttaaaatt 48873768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 6e-53; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 15506584 - 15506342
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctcta 118  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| || |  ||||||| ||||||||||||  | ||||  ||||||| ||    
T  15506584 tttatataaattttcttaaaacattgatttcattcattgtcactctaaaatttcactccttttcacccacaaacaatcattaatgttcggtcaatcttta 15506485  T
Q  119 tagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt-annnnnnncaatgatgctagagtttctat 217  Q
    ||||| |||||||| | |||||||||||||||| |  |||| |||||||||||||| |||||||||||||         |||||||||||||||||||||    
T  15506484 tagaagattaaagagtgaatcaaaacatctttcattcatactctattgcatataagtaattgaatttcttcttctttttcaatgatgctagagtttctat 15506385  T
Q  218 tttattcttgttgttcaatgttgatatgttatgcagtttacaa 260  Q
    ||  ||||||||||| || ||||||||| |||||| |||||||    
T  15506384 ttctttcttgttgtttaacgttgatatgctatgcactttacaa 15506342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 1536967 - 1536814
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctcta 118  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||| || || || ||||||| ||||| ||||||||| |||||||||||||| |    
T  1536967 tttatataaattttcttaaaaccttaatttcattcattgtcgctctaaaacttcaccctatttcacccacaaa-aatcatggatgttcaatcaatctc-a 1536870  T
Q  119 tagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataag 174  Q
    ||||| |||||||| | ||| |||||||||||| || |||| ||||||||||||||    
T  1536869 tagaagattaaagagtgaattaaaacatctttcatccatactctattgcatataag 1536814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 257
Target Start/End: Complemental strand, 7818456 - 7818225
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctcta 118  Q
    ||||||||||||||||||||||| ||||||||||  |||| |||||||||||||         |||| ||||||||||||| | ||||| ||||| ||||    
T  7818456 tttatataaattttcttaaaaccctgatttcatttgttgttactctaaaatttt---------cacccacaaacaatcatgaatgttcagtcaatttcta 7818366  T
Q  119 tagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttct-tannnnnnncaatgatgctagagtttcta- 216  Q
    || || |||||||| | |||| ||||||||||| ||||||| ||| |||||||||| ||||||||||||          ||||||||||||||||||||     
T  7818365 taaaagattaaagagtgaatcgaaacatctttcatctatactctaatgcatataagtaattgaatttctccttctttttcaatgatgctagagtttctat 7818266  T
Q  217 ttttattcttgttgttcaatgttgatatgttatgcagttta 257  Q
    |||| ||| ||||| |||||||| |||||||||||| ||||    
T  7818265 tttttttcatgttgctcaatgtttatatgttatgcacttta 7818225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 1523703 - 1523543
Alignment:
Q  20 ttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatca 111  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||        | ||||||||||| || ||||||| |    
T  1523703 ttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcat-gatgttcaatta 1523605  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  1523604 atctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 1523543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 37829776 - 37829615
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatc-------atggacgttcaatca 111  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||||||| || |||||||||| || |||||||       |  || ||||||| |    
T  37829776 tttatataaattttcttaaaattttgatttcattcattatcactctaaaatttcactctctttcacccaccaacaatcaaacaataaagatgttcaatta 37829677  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  37829676 atctctatggaagattaaagagtgaatcaaaacatctttcattcatactcaattgcatataa 37829615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 3025561 - 3025627
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  3025561 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacc 3025627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 36852573 - 36852415
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaat 113  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||||        | ||||||||| | || ||||||| |||    
T  36852573 atataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcct-gatgttcaattaat 36852475  T
Q  114 ctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  36852474 ctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 36852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 32933531 - 32933370
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  32933531 tttatataaattttcttaaaatcttgatttcattcattgtaactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 32933433  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  32933432 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 32933370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 43457550 - 43457711
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||| || ||||||||||        | ||||||||| | || |||||||     
T  43457550 tttatataaattttcttaaaatcttattttcattcattgtcactctaaaatttcactctctttcacccatcaacgatcaaacaatcct-gatgttcaatt 43457648  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  43457649 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 43457711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 47428986 - 47429123
Alignment:
Q  21 tatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaac--------aaacaatcatggacgttcaatcaa 112  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||| ||        |||||||| |  ||||| ||| ||    
T  47428986 tatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgattaaacaatcct-aacgtttaattaa 47429084  T
Q  113 tctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||||| ||| |||||||| | ||||||||||||||||    
T  47429085 tctctatggaagattaaagagtgaatcaaaacatctttc 47429123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 50469905 - 50469767
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc-------aacaaacaatcatggacgttcaatca 111  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||| || ||||||||||       | ||||||||| | || ||||||| |    
T  50469905 tttacataaattttcttaaaatcttgatttcattcattgtcacactaaaatttaactctctttcacccacaacaatcaaacaatcct-gatgttcaatta 50469807  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    |||||||| ||| |||||||| | ||||||||||||||||    
T  50469806 atctctatggaagattaaagagtgaatcaaaacatctttc 50469767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 51323396 - 51323235
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactcttt----caccaa----caaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |  ||||||    ||||||    ||||||||| | || |||||||     
T  51323396 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccattctctttcatccaccaacgatcaaacaatcct-gatgttcaatt 51323298  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  51323297 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 51323235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 43620901 - 43621040
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  43620901 tttatataaattttcttaaaatcttgatttcattcattatcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 43620999  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||||||| ||| |||||||| | ||||||||||||||||    
T  43621000 aatctctatggaagattaaagagtgaatcaaaacatctttc 43621040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 13961629 - 13961790
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||||||| || |||||||||||| |||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  13961629 tttatataaattttcttacaatcttgatttcatttattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 13961727  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  13961728 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 13961790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 35338886 - 35339047
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  35338886 tttatataaattttcttaaaatcttaatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 35338984  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | ||||||||||| |||| |  |||| | |||||||||||    
T  35338985 aatctctatggaagattaaagagtgaatcaaaacatgtttcattcatacccgattgcatataa 35339047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 47466704 - 47466865
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||  |||||||||        | ||||||||| | ||  ||||||     
T  47466704 tttatataaattttcttaaaatcttgatttcatttattgtcactctaaaattctactatctttcacccaccaacgatcaaacaatcct-gatattcaatt 47466802  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||| ||| ||| |||||||| |||||||||||||||||| |  |||| | |||||||||||    
T  47466803 aatctttatggaagattaaagagtaaatcaaaacatctttcattcatactcgattgcatataa 47466865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 1488509 - 1488415
Alignment:
Q  25 taaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctata 120  Q
    ||||| ||||||||||||| ||||||||||||||| |||||||| || || |  ||||||| ||||| ||||||||| ||||||||||||||||||    
T  1488509 taaatattcttaaaaccttcatttcattcattgtcgctctaaaacttcaccccatttcacccacaaa-aatcatggatgttcaatcaatctctata 1488415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 10480572 - 10480733
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||  || ||||| |||| || ||| ||||         || ||||||| |    
T  10480572 tttatataaattttcttaaaatcttgatttcattccttgtcactctaaaattccactctcttgcacccaccaacgatcaaaaaatcctgatgttcaatta 10480671  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  10480672 atctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 10480733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 3027353 - 3027287
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||  || ||||||||||    
T  3027353 tttatataaatttttttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacc 3027287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 30215052 - 30215118
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||  |||||||||    
T  30215052 tttatataaattttcttaaaatcttgatttcattcattgtcactttaaaatttcactatctttcacc 30215118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 32136257 - 32136179
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca 97  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||  |  |||||||||| |||||| ||||    
T  32136257 tttatataaattttcttaaaatctttatttcattcattgtcactctaaaattccaatctctttcacccacaaacgatca 32136179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 11691735 - 11691574
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  11691735 tttatataaattttcttaaaattttgatttcattcattttcactctaaaattccactctctttcacccatcaacgatcaaacaatcct-gatgttcaatt 11691637  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||||||| |||||||| | ||| ||||||| |||| |  |||| | |||||||||||    
T  11691636 aatctctatagaagattaaagagtgaataaaaacatatttcattcatactcgattgcatataa 11691574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 158
Target Start/End: Complemental strand, 7795316 - 7795189
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatag 121  Q
    |||||||||||||||||||| | ||||||||| |||||||||||||||         ||||||| ||||||||||||| | ||||| ||||| ||||||     
T  7795316 atataaattttcttaaaaccctaatttcattcgttgtcactctaaaat---------tttcacccacaaacaatcatgaatgttcagtcaatttctataa 7795226  T
Q  122 aatattaaagaataaatcaaaacatctttcctctata 158  Q
    || | |||||| | |||| ||||||||||| ||||||    
T  7795225 aagaataaagagtgaatcgaaacatctttcatctata 7795189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 34160233 - 34160097
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaat 113  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || ||||| | |||    
T  34160233 atataaattttcttaaaatgttgatttcattcattgtcactctaaaattccactctctttcacccatcaacgatcaaacaatc-ttgatgttcagttaat 34160135  T
Q  114 ctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    |||||| ||| |||||||| | ||||||||||||||||    
T  34160134 ctctatggaagattaaagagtgaatcaaaacatctttc 34160097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 8714001 - 8713950
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  8714001 tttatataaattttcttaaaatctttatttcattcattgtcactctaaaatt 8713950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 48594 - 48660
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||||||||||| |||||| |||||||||||||||||||| | ||||||||||| ||||| ||||    
T  48594 tttatataaatttttttaaaatcttgatttcattcattgtcattataaaattttactctcttgcacc 48660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 24035371 - 24035305
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||  || ||||||||||    
T  24035371 tttatataaattttcttaaaatcttgatttcattcatcgtcgctctaaaattccactctctttcacc 24035305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 188
Target Start/End: Original strand, 42130970 - 42131116
Alignment:
Q  42 ttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaagaataaatcaa 141  Q
    |||||||||||| |||| |||||||||||| |   ||||||||| ||||||||||| | | |||| ||| || ||||||  | ||| |||| ||||||||    
T  42130970 ttgatttcattcgttgttactctaaaatttcatcatctttcacctacaaacaatcacgaatgttctatcgatttctataagagatttaagagtaaatcaa 42131069  T
Q  142 aacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    |||||||||| |  ||||  ||||  ||||||| |||||||||||||    
T  42131070 aacatctttcattcatactatattatatataagtaattgaatttctt 42131116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 20292570 - 20292731
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||||||||||||||| ||||| |||||||  |  ||||||||||        | ||||||||| | ||  ||||||     
T  20292570 tttatataaattttcttaaaatcttgatttcattcattatcactataaaattccatcctctttcacccaccaaggatcaaacaatcct-gatattcaatt 20292668  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  20292669 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 20292731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 37682553 - 37682692
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    |||||||||||||||||||||  || |||||||| ||||| |||||||||||| |  |||||||||| |||||| ||||         || |||||||||    
T  37682553 tttatataaattttcttaaaatttttatttcatttattgttactctaaaatttcaatctctttcacccacaaacgatcaaacaattctgatgttcaatca 37682652  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    |||||||| ||| |||||||| | ||| ||||||||||||    
T  37682653 atctctatggaagattaaagagtgaattaaaacatctttc 37682692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 7794982 - 7794922
Alignment:
Q  197 caatgatgctagagtttctattttattcttgttgttcaatgttgatatgttatgcagttta 257  Q
    |||||| ||||||||||||||||| ||| |||||||||||||| |||||||||||| ||||    
T  7794982 caatgacgctagagtttctatttttttcatgttgttcaatgtttatatgttatgcacttta 7794922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 7319024 - 7318973
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  7319024 ttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacc 7318973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 22847833 - 22847695
Alignment:
Q  42 ttgatttcattcattgtcactctaaaattttacactctttcaccaa--------caaacaatcatggacgttcaatcaatctctatagaatattaaagaa 133  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||        ||||||||| | || ||||||| ||||||||||||| ||||||||     
T  22847833 ttgatttcattcattgtcacactaaaatttcactctctttcaccaaccaacgatcaaacaatcct-gatgttcaattaatctctatagaagattaaagag 22847735  T
Q  134 taaatcaaaacatctttcctctatacactattgcatataa 173  Q
    | |||||||| || |||| |  |||| | |||||||||||    
T  22847734 tgaatcaaaatatatttcattcatactcgattgcatataa 22847695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 24897694 - 24897643
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    |||||||||||| |||||| | |||||||||||||||||||||| |||||||    
T  24897694 tttatataaattatcttaatatcttgatttcattcattgtcactataaaatt 24897643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 51320654 - 51320705
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    ||||||||||||||||||||| || ||||||||| ||||||| |||||||||    
T  51320654 tttatataaattttcttaaaatctagatttcattaattgtcattctaaaatt 51320705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 40431150 - 40430988
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaa--------caaacaatcatggacgtt-caat 109  Q
    ||||||||||  || |||||| |||||||||||||||| |||||||||||||  || ||||||| || |        ||||||||| || | ||| ||||    
T  40431150 tttatataaaaatttttaaaatcttgatttcattcattttcactctaaaattccactctctttcccccatcaacgatcaaacaatcctg-atgttgcaat 40431052  T
Q  110 caatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
     ||||||||||||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  40431051 taatctctatagaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 40430988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 173
Target Start/End: Original strand, 41201626 - 41201764
Alignment:
Q  42 ttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatcaatctctatagaatattaaagaat 134  Q
    |||||||||||||||||||| ||||||||| || |||||||||| || ||| ||||         || ||||||| ||||||||| ||| |||||| | |    
T  41201626 ttgatttcattcattgtcacactaaaatttcactctctttcacccaccaacgatcaaacaattctgatgttcaattaatctctatggaagattaaaaagt 41201725  T
Q  135 aaatcaaaacatctttcctctatacactattgcatataa 173  Q
     |||||||||||||||| |  |||| | |||||||||||    
T  41201726 gaatcaaaacatctttcattcatactcgattgcatataa 41201764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 1356399 - 1356442
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  1356399 tttatataaattttcttaaaaccctaattttattcattgtcact 1356442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 10541462 - 10541505
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  10541462 tttatataaattttcttaaaaccctaattttattcattgtcact 10541505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 56017795 - 56017833
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattg 57  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  56017795 tttatataaattttcttaaaaccttaattttattcattg 56017833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 614571 - 614530
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  614571 tttatataaattttcttaaaaccctaattttattcattgtca 614530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 5098770 - 5098729
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  5098770 tttatataaattttcttaaaaccctaattttattcattgtca 5098729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 19873434 - 19873475
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  19873434 tttatataaattttcttaaaaccctaattttattcattgtca 19873475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 20434853 - 20434812
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  20434853 tttatataaattttcttaaaaccctaattttattcattgtca 20434812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 20738488 - 20738447
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  20738488 tttatataaattttcttaaaaccctaattttattcattgtca 20738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 23894542 - 23894583
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    |||||||||||||| |||||||||| |||| |||||||||||    
T  23894542 tttatataaattttattaaaaccttaattttattcattgtca 23894583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 37233519 - 37233560
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  37233519 tttatataaattttcttaaaaccctaattttattcattgtca 37233560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 38291239 - 38291280
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  38291239 tttatataaattttcttaaaaccctaattttattcattgtca 38291280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 39539814 - 39539855
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  39539814 tttatataaattttcttaaaaccctaattttattcattgtca 39539855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 42349441 - 42349400
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  42349441 tttatataaattttcttaaaaccctaattttattcattgtca 42349400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 43829601 - 43829642
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  43829601 tttatataaattttcttaaaaccctaattttattcattgtca 43829642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 46563830 - 46563871
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  46563830 tttatataaattttcttaaaaccctaattttattcattgtca 46563871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 70
Target Start/End: Complemental strand, 48991266 - 48991237
Alignment:
Q  41 cttgatttcattcattgtcactctaaaatt 70  Q
    ||||||||||||||||||||||||||||||    
T  48991266 cttgatttcattcattgtcactctaaaatt 48991237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 52839069 - 52839110
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  52839069 tttatataaattttcttaaaaccctaattttattcattgtca 52839110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 52912507 - 52912548
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  52912507 tttatataaattttcttaaaaccctaattttattcattgtca 52912548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 53874391 - 53874432
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    |||||||||||||||||||||| || |||| |||||||||||    
T  53874391 tttatataaattttcttaaaactttaattttattcattgtca 53874432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 56363444 - 56363403
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  56363444 tttatataaattttcttaaaaccctaattttattcattgtca 56363403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 243
Target Start/End: Complemental strand, 31608387 - 31608167
Alignment:
Q  23 tataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctataga 122  Q
    ||||||| |||||||||||||||||||||||||| || ||||||||||| ||  ||||||||| |  |||||||||||| ||||||||||||||||||||    
T  31608387 tataaatattcttaaaaccttgatttcattcattatcgctctaaaatttcactatctttcacccaggaacaatcatggatgttcaatcaatctctataga 31608288  T
Q  123 atattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt-annnnnnncaatgatgctagagtttctatttta 221  Q
    | |||||||||||||||||| |||||||| || ||||  ||||||||||||| || ||||||||||         ||||||||||||||||||||||||     
T  31608287 agattaaagaataaatcaaagcatctttcatccatactttattgcatataagtaagtgaatttcttcttcttttccaatgatgctagagtttctatttt- 31608189  T
Q  222 ttcttgttgttcaatgttgata 243  Q
    |||||||||||||| |||||||    
T  31608188 ttcttgttgttcaacgttgata 31608167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 23483329 - 23483160
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctcta 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| || ||||||||| ||||| | ||||||||||| ||    
T  23483329 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatttcacccgctttcccccacaaacaattatggatggtcaatcaatctata 23483230  T
Q  119 tagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    ||||| |||||||| | |||||||||||||||| || |||| |||||||||||||  |||||||||||||    
T  23483229 tagaagattaaagagtgaatcaaaacatctttcgtccatactctattgcatataaataattgaatttctt 23483160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 35232916 - 35233077
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||        | ||||||||||| || |||||||     
T  35232916 tttatatcaattttcttaaaatcttgatttcattcattgtcgctctaaaatttcactctctttcacccaccaacaatcaaacaatcat-gatgttcaatt 35233014  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | ||||||||||| |||| |  |||| | |||||||||||    
T  35233015 aatctctatggaagattaaagagtgaatcaaaacatttttcattcatactcgattgcatataa 35233077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 48585531 - 48585370
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  48585531 tttatataaattttcttaaaattttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 48585433  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||| || ||| |||||||| | |||||||||||||||| || |||| | |||||||||||    
T  48585432 aatctcaatggaagattaaagagtgaatcaaaacatctttcatccatactcgattgcatataa 48585370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 49779046 - 49779207
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  49779046 tttatataaattttcttaaaatcttgatttcatttaatgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 49779144  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| |||||||||||||||||| |  |||| | |||||||||||    
T  49779145 aatctctatggaagattaaagagtaaatcaaaacatctttcattcatactcgattgcatataa 49779207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 50507717 - 50507845
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatag 121  Q
    |||||| |||| ||||||| ||||||||||| ||| |||||||||||||| |  |||||||||| ||||||||||||| | ||||||||||||| | |||    
T  50507717 atataattttttttaaaactttgatttcattaattatcactctaaaatttcatcctctttcacccacaaacaatcatgaatgttcaatcaatctttgtag 50507816  T
Q  122 aatattaaagaataaatcaaaacatctttc 151  Q
    || |||||| | | ||||| ||||||||||    
T  50507817 aagattaaa-agtgaatcataacatctttc 50507845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 36231836 - 36231994
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatcaatc 114  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||||| || ||| ||||         || ||||||| ||||    
T  36231836 atataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcccgatgttcaattaatc 36231935  T
Q  115 tctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  36231936 tctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 36231994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 38144423 - 38144584
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactcttt----caccaa----caaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||    ||||||    ||||||||| | || |||||||     
T  38144423 tttatataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcactctctttcacacaccaacgatcaaacaatcct-gatgttcaatt 38144521  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | ||| |||||||||||| |  |||| | |||||||||||    
T  38144522 aatctctatggaagattaaagagtgaattaaaacatctttcattcatactcgattgcatataa 38144584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 52343680 - 52343519
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatg-------gacgttcaatca 111  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||  | ||| |||| |       || ||||||| |    
T  52343680 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccgccaacgatcaagcaatcctgatgttcaatta 52343581  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||  || |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  52343580 atctctatgaaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 52343519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 19942485 - 19942324
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  19942485 tttatataaatttttgtaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 19942387  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  19942386 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 19942324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 4595730 - 4595782
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattt 71  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4595730 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattt 4595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 24200355 - 24200194
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||| |||||||  || |||||||||| || ||| ||||       | || ||||||| |    
T  24200355 tttatataaattttcttaaaatcttaatttcattcattatcactttaaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaatta 24200256  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||| ||| |||||||| | |||||||| ||||||| | ||||| | |||||||||||    
T  24200255 atctctatcgaagattaaagagtgaatcaaaatatctttcatttatactcaattgcatataa 24200194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 41589586 - 41589447
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    |||||||||||||| || ||| ||| ||||||||||||||||||||||||||  |  |||||||||| |||||| ||||         || |||||||||    
T  41589586 tttatataaattttttttaaatctttatttcattcattgtcactctaaaattccaatctctttcacccacaaacgatcaaacaatcctgatgttcaatca 41589487  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    |||||||| ||| |||||||| | ||||||||||||||||    
T  41589486 atctctatggaagattaaagagtgaatcaaaacatctttc 41589447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 52813834 - 52813783
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  52813834 tttatataaattttcttaaaatcttgatttcattcatcgtcactctaaaatt 52813783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 2612504 - 2612570
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||||||||  || ||||||||||    
T  2612504 tttaaataaattttcttaaaatcttgatttcattcattctcactctaaaattccactctctttcacc 2612570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 261
Target Start/End: Original strand, 24989776 - 24989943
Alignment:
Q  90 aacaatcatggacgttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt- 188  Q
    ||||||||| || ||||||||||||||||||||| |||||||| | ||||||| ||||||||  | ||||    ||||||||| | || | ||||||||     
T  24989776 aacaatcatagatgttcaatcaatctctatagaagattaaagagttaatcaaagcatctttcaacgatac----ttgcatatatgtaagtaaatttcttc 24989871  T
Q  189 annnnnnncaatgatgctagagtttctattttattcttgttgttcaatgttgatatgttatgcagtttacaat 261  Q
            |||||||||| |||||| |||||| ||||||||||||||||| ||||||||||||| | ||||||    
T  24989872 ttctttttcaatgatgctggagtttttatttt-ttcttgttgttcaatgtcgatatgttatgcactctacaat 24989943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 44353585 - 44353731
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaatctctatagaata 125  Q
    |||||| ||||||||||||||||||||| ||||||||| || ||||||||||        | ||||||||| | || ||||||| ||||||||| ||| |    
T  44353585 ttaaaatcttgatttcattcattgtcacactaaaatttcactctctttcacccacctacgatcaaacaatcct-gatgttcaattaatctctatggaaga 44353683  T
Q  126 ttaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  44353684 ttaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 44353731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 18167890 - 18168024
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtc---actctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatct 115  Q
    |||||||||| |||| |||||| || |||||||||||  ||   |||||||||||| || |||||||||| ||||| ||||||||| ||||||||||| |    
T  18167890 tttatataaaatttcataaaacttttatttcattcatcatcgttactctaaaatttcaccctctttcacccacaaagaatcatggatgttcaatcaattt 18167989  T
Q  116 ctatagaatattaaagaataaatcaaaacatctttc 151  Q
     |||| || |||||| | | ||||||| ||||||||    
T  18167990 atataaaagattaaa-agtgaatcaaagcatctttc 18168024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 28412153 - 28411992
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||| |||||| |||| |||||||| |||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  28412153 tttatataacttttctgaaaatcttgatttaattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 28412055  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||| ||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  28412054 aatctttatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 28411992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 30419573 - 30419427
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaatctctatagaata 125  Q
    |||||| ||||||||||||||||||||| ||||||||| || ||||||||||        | ||||||||| | || ||||||| ||||||||| ||| |    
T  30419573 ttaaaatcttgatttcattcattgtcacactaaaatttcactctctttcacccacctacgatcaaacaatcct-gatgttcaattaatctctatggaaga 30419475  T
Q  126 ttaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||| | | |||||||||||||||| |  |||| | |||||||||||    
T  30419474 ttaaaaagtgaatcaaaacatctttcattcatactcgattgcatataa 30419427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 47097656 - 47097741
Alignment:
Q  103 gttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    ||||||||||||| ||| ||| |||||||||| |||||||||| ||||| || ||||   |||||||||||| || ||||||||||    
T  47097656 gttcaatcaatctttatggaagattaaagaatgaatcaaaacacctttcatccatacttgattgcatataagtaaatgaatttctt 47097741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 8947233 - 8947317
Alignment:
Q  104 ttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    |||||||||| ||||| ||| |||||||| | |||||||||||||||| || |||| | || ||||||||| || ||||||||||    
T  8947233 ttcaatcaatttctatggaagattaaagagtgaatcaaaacatctttcatccatactcgatagcatataagtaagtgaatttctt 8947317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 33393298 - 33393246
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattt 71  Q
    |||||||||||| | |||| | |||||||||||||||||||||||||||||||    
T  33393298 tttatataaattattttaatatcttgatttcattcattgtcactctaaaattt 33393246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 8947146 - 8947189
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  8947146 tttatataaatttttttaaaaccttgattttattcattgtcact 8947189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 7680419 - 7680565
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaac--------aaacaatcatggacgttcaatcaatctctatagaata 125  Q
    |||||| ||||||||||||||| ||| ||||||||||  || |||||||||| ||        |||||||| || | ||||||| ||||||||| ||| |    
T  7680419 ttaaaatcttgatttcattcatcgtcgctctaaaattccactctctttcacccaccaacgatcaaacaatcctg-atgttcaattaatctctatggaaga 7680517  T
Q  126 ttaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  7680518 ttaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 7680565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 35154963 - 35155120
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaat 113  Q
    ||||||||||| ||||| | |||||||||||||||||| ||||||||||  || ||||||||||        | |||| |||||| || ||||||| |||    
T  35154963 atataaatttttttaaatc-ttgatttcattcattgtcgctctaaaattccactctctttcacccaccaacgatcaaataatcat-gatgttcaattaat 35155060  T
Q  114 ctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||| ||| |||||||| | ||||||||||| |||| |  |||| | |||||||||||    
T  35155061 ctctatggaagattaaagagtgaatcaaaacatttttcattcatactcgattgcatataa 35155120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 14279757 - 14279596
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||| | |||| ||||||||| ||| ||||||||||||||||  ||  |||||||||        | ||||||||||| || |||||||     
T  14279757 tttatataaattttttgaaaatcttgatttctttcgttgtcactctaaaattccactatctttcacccaccaacgatcaaacaatcat-gatgttcaatt 14279659  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||| |||||  || |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  14279658 aatttctatgaaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 14279596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 54556988 - 54556913
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca 97  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||    | |||||| |||||||||| |||||| ||||    
T  54556988 tttatataaattttcttaaaatcttgattttatttattgtcact---gagttttaccctctttcacccacaaacgatca 54556913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 4515349 - 4515392
Alignment:
Q  17 cctttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||||| | |||| |||||||||||    
T  4515349 cctttatataaattttcttaaaaccctaattttattcattgtca 4515392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 20049050 - 20049007
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  20049050 tttatataaattttcttaaaaccctaattttattcattgtcact 20049007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 26091087 - 26091048
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgt 58  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  26091087 tttatataaattttcttaaaaccttaattttattcattgt 26091048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 40585469 - 40585512
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  40585469 tttatataaattttcttaaaaccctaattttattcattgtcact 40585512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 6267649 - 6267690
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  6267649 tttatataaattttcttaaaaccctaattttattcattgtca 6267690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 7149313 - 7149354
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  7149313 tttatataaattttcttaaaaccctaattttattcattgtca 7149354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 10840740 - 10840781
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  10840740 tttatataaattttcttaaaaccctaattttattcattgtca 10840781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 20834857 - 20834898
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  20834857 tttatataaattttcttaaaaccctaattttattcattgtca 20834898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 22781155 - 22781196
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  22781155 tttatataaattttcttaaaaccctaattttattcattgtca 22781196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 25711669 - 25711628
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  25711669 tttatataaattttcttaaaaccctaattttattcattgtca 25711628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 33967660 - 33967619
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  33967660 tttatataaattttcttaaaaccctaattttattcattgtca 33967619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 36431057 - 36431016
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  36431057 tttatataaattttcttaaaaccctaattttattcattgtca 36431016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 37971019 - 37971060
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  37971019 tttatataaattttcttaaaaccctaattttattcattgtca 37971060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 38871866 - 38871825
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  38871866 tttatataaattttcttaaaaccctaattttattcattgtca 38871825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 41070625 - 41070584
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  41070625 tttatataaattttcttaaaaccctaattttattcattgtca 41070584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 53975013 - 53974972
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  53975013 tttatataaattttcttaaaaccctaattttattcattgtca 53974972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 3785 - 3954
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctcta 118  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||| || | |||||| |  |||||||| ||||| | ||||||||||||||    
T  3785 tttatataaaattttttaaaaccttgatttcattcattgtcactctaaaatttcacccgctttcatccgcaaacaattatggatggtcaatcaatctcta 3884  T
Q  119 tagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    ||||| |||||| | | |||||||| ||||||| || |||| |||||||||||||  |||||||||||||    
T  3885 tagaagattaaaaagtgaatcaaaatatctttcgtccatactctattgcatataaataattgaatttctt 3954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 5e-38; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 6675173 - 6675330
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcatt-----cattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaat 113  Q
    |||||||||||| |||||||| ||||||||||||     |||| |||||||||||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  6675173 tttatataaattatcttaaaatcttgatttcatttaaaacattttcactctaaaattttac--tctttcaccaacaaataatcatggatgttcaatcaat 6675270  T
Q  114 ctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||||| |||||||| | |||||||||||||||| || |||| | |||||||||||    
T  6675271 ctctatagaagattaaagagtgaatcaaaacatctttcatccatactcgattgcatataa 6675330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 17315048 - 17314892
Alignment:
Q  32 tcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaag 131  Q
    |||||||| ||| |||||||| ||||| |||||||||||| || |||||||| | ||||||||||||| | ||||||||||||| |||| |  |||||||    
T  17315048 tcttaaaatcttaatttcatttattgttactctaaaatttcactctctttcagccacaaacaatcatgaatgttcaatcaatctttataaaggattaaag 17314949  T
Q  132 aataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    | | ||||||||||| |||| || |||| |||||||||||||| || ||||||||||    
T  17314948 agtgaatcaaaacatatttcatccatactctattgcatataagtaactgaatttctt 17314892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 29622654 - 29622815
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || |||||||||| || ||| ||||       | || ||||||| |    
T  29622654 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaatta 29622753  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||| ||| |||||||| | |||||||||||||||| | ||||| | |||||||||||    
T  29622754 atctctatggaagattaaagagtgaatcaaaacatctttcatttatactcgattgcatataa 29622815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 5715685 - 5715547
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcac-------caacaaacaatcatggacgttcaatca 111  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||       || ||||||||| | || ||||||| |    
T  5715685 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacatcaaacaatcct-gatgttcaatta 5715587  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    |||||||| ||| |||||||| | | ||||||||||||||    
T  5715586 atctctatggaagattaaagagtgactcaaaacatctttc 5715547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 11368113 - 11368274
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  11368113 tttatataaattttcttaaaatcttgatttcattcattttcactctaaaattccactctctttcacccatcaatgatcaaacaatcct-gaagttcaatt 11368211  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||||||| |||||||| ||| |||||||||||||| |  |||| | |||||||||||    
T  11368212 aatctctatagaagattaaagagtaagtcaaaacatctttcattcatactcgattgcatataa 11368274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 31090525 - 31090686
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  31090525 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaactatcaaacaatcct-gatgttcaatt 31090623  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  31090624 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 31090686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 26947151 - 26947302
Alignment:
Q  32 tcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaag 131  Q
    |||||||||||| |||| |||  |||||  |||||||||| || |||||||||| |||||||||||||||  |||||||||||||||||||| ||| |||    
T  26947151 tcttaaaaccttaattttatttcttgtccttctaaaatttcactctctttcacccacaaacaatcatgga-tttcaatcaatctctatagaagattgaag 26947249  T
Q  132 aataaatcaaaacatctttcctctatacactattgcatataagcaattgaatt 184  Q
    | | |||||||||||||||| |  || | | |||||||||||| || ||||||    
T  26947250 agtgaatcaaaacatctttcattcattctcaattgcatataagtaagtgaatt 26947302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 18024935 - 18024760
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttc-------accaacaaacaatcatggacgttcaatca 111  Q
    ||||||||| |||| |||||| |||||||||||||| |||||||||||||||| || |||||||       || | ||||||||| | || |||||||||    
T  18024935 tttatataagtttttttaaaatcttgatttcattcactgtcactctaaaatttcactctctttcatcacaaacgatcaaacaatcct-gatgttcaatca 18024837  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    |||||||| ||| ||||| || | |||||||| ||||||| || |||| | |||||||||||| || ||||||||||    
T  18024836 atctctatggaagattaaggagtgaatcaaaaaatctttcatccatactcgattgcatataagtaactgaatttctt 18024760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 247
Target Start/End: Original strand, 14253130 - 14253305
Alignment:
Q  69 ttttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgca 168  Q
    |||||| |||||||||| ||||||||||||||| |||||||||||||||||| || |||||||| | |||||||| || |||| ||  ||| ||||||      
T  14253130 ttttaccctctttcacccacaaacaatcatggatgttcaatcaatctctataaaagattaaagagtgaatcaaaatatttttcatcattactctattgtg 14253229  T
Q  169 tataagcaattgaatttcttannnnnnncaatgatgctagagtttctattttattcttgttgttcaatgttgatatgtt 247  Q
    |||||| || | |  |||||        |||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  14253230 tataagtaagtaatcttctt--tttgtacaatgatgctagagtttctatttt-ttcttgttgttgaaggttgatatgtt 14253305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 32172977 - 32173055
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca 97  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||||||||| || |||||||||| | |||||||||    
T  32172977 tttatataaattatcttaatatcttgatttcattcattgtcactctaaaatttcactctctttcacccagaaacaatca 32173055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 8526052 - 8525891
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||||||| || ||||||||||        | ||||||||| | || |||||||     
T  8526052 tttatataaattttcttaaaatattaatttcattcattgtcactctaaaatttcactctctttcacccatcaacgatcaaacaatcct-gatgttcaatt 8525954  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||| ||||||| |  |||| | |||||||||||    
T  8525953 aatctctatggaagattaaagagtgaatcaaaatatctttcattcatactcgattgcatataa 8525891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 7082292 - 7082125
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctcta 118  Q
    |||||||||||||||||||| ||||||||||||||| || |||||||||||||  ||| |    || | |||||||||||  | |||||||||||||  |    
T  7082292 tttatataaattttcttaaagccttgatttcattcaatgccactctaaaattt--cacccacaaacgatcaaacaatcatccatgttcaatcaatctaca 7082195  T
Q  119 tagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    | ||| |||||||| | |||||||| |||| || || | || | |||||||||||| || ||||||||||    
T  7082194 tggaagattaaagagtgaatcaaaatatctctcatccaaactcgattgcatataagtaagtgaatttctt 7082125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 8810068 - 8810231
Alignment:
Q  23 tataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctataga 122  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||  ||| |    || |  |||||||||| || ||||||||||||   || ||    
T  8810068 tataaattttcttaaagccttgatttcattcaatgtcactctaaaattt--cacccacaaacgatgaaacaatcatcgatgttcaatcaatcaacatgga 8810165  T
Q  123 atattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    | |||||||| | ||||||||||||| || || | || | |||||||||||| || ||||||||||    
T  8810166 agattaaagagtgaatcaaaacatctctcatccaaactcaattgcatataagtaagtgaatttctt 8810231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 29880705 - 29880756
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  29880705 tttatataaattttcttaaaatcttgatttcattaattgtcactctaaaatt 29880756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 6926649 - 6926488
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||| ||||| ||| |||||| ||||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  6926649 tttagataaaattttttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacctaccaacgatcaaacaatcct-gatgttcaatt 6926551  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | ||| |||||||||||| |  |||| | |||||||||||    
T  6926550 aatctctatggaagattaaagagtgaattaaaacatctttcattcatactcgattgcatataa 6926488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 24418794 - 24418902
Alignment:
Q  77 tctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagca 176  Q
    ||||||||| | ||||||||||||| ||||| |||||||| ||| || |||||||| | ||| ||||| |||||| || ||||  ||||||||||| | |    
T  24418794 tctttcacccaaaaacaatcatggatgttcagtcaatctcaataaaagattaaagagttaataaaaacgtctttcatccatactatattgcatataggta 24418893  T
Q  177 attgaattt 185  Q
    |||||||||    
T  24418894 attgaattt 24418902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 34085037 - 34085102
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcac 84  Q
    ||||||||| |||| |||||| |||||||||||||||| |||||||||||||  || |||||||||    
T  34085037 tttatataattttttttaaaatcttgatttcattcattctcactctaaaattccactctctttcac 34085102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 13444510 - 13444651
Alignment:
Q  17 cctttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactcttt----caccaa----caaacaatcatggacgttcaa 108  Q
    |||||||||||||||  |||||| |||||||||  ||||||||| |||||||||| || ||||||    ||||||    ||||||||| | || ||||||    
T  13444510 cctttatataaatttatttaaaatcttgatttcggtcattgtcaatctaaaatttcactctctttcatccaccaaggatcaaacaatcct-gatgttcaa 13444608  T
Q  109 tcaatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    | ||||| ||| ||| |||||||| | ||||||||||||||||    
T  13444609 ttaatctatatggaagattaaagagtgaatcaaaacatctttc 13444651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 34084782 - 34084830
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaa 67  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  34084782 tttatataaatttttttaaaatcttgatttcattcattctcactctaaa 34084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 26181062 - 26181191
Alignment:
Q  22 atataaattttcttaaaaccttgatttcatt--cattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctat 119  Q
    |||||||||||||||||||  |||||| |||  |  | || ||||||| ||| || |||||||||| ||||||||||||| | |||||||||||||  ||    
T  26181062 atataaattttcttaaaactctgattttattatcgctctcgctctaaactttcactctctttcacccacaaacaatcatgaatgttcaatcaatctaaat 26181161  T
Q  120 agaatattaaagaataaatcaaaacatctt 149  Q
      || ||||| || ||||||||||| ||||    
T  26181162 gaaagattaaggagtaaatcaaaacgtctt 26181191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 6626074 - 6626033
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  6626074 tttatataaattttcttaaaaccttaattttattcattgtca 6626033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 29629843 - 29629886
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  29629843 tttatataaattttcttaaaaccctaattttattcattgtcact 29629886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 6675358 - 6675417
Alignment:
Q  200 tgatgctagagtttctattttattcttgttgttcaatgttgatatgttatgcagtttacaat 261  Q
    ||||||||||||||| | |||  ||||||||||||| |||||||||||||||| | ||||||    
T  6675358 tgatgctagagtttccacttt--tcttgttgttcaaagttgatatgttatgcactgtacaat 6675417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 3095290 - 3095245
Alignment:
Q  17 cctttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | | |||| |||||||||||||    
T  3095290 cctttatataaattttcttaaaatcctaattttattcattgtcact 3095245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 25331693 - 25331652
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  25331693 tttatataaattttcttaaaaccctaattttattcattgtca 25331652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 25332231 - 25332272
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  25332231 tttatataaattttcttaaaaccctaattttattcattgtca 25332272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 29121709 - 29121750
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  29121709 tttatataaattttcttaaaaccctaattttattcattgtca 29121750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 7e-37; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 36 - 174
Target Start/End: Complemental strand, 35006444 - 35006306
Alignment:
Q  36 aaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaagaata 135  Q
    |||||||| ||||||||||||||||||||||||||| ||  ||||||| | ||||||||||||||| ||||||||||||||||||||| ||| |||| |     
T  35006444 aaaaccttaatttcattcattgtcactctaaaatttcaccatctttcatccacaaacaatcatggatgttcaatcaatctctatagaagattgaagagtg 35006345  T
Q  136 aatcaaaacatctttcctctatacactattgcatataag 174  Q
    |||||||||||||||| ||||||  | ||||||||||||    
T  35006344 aatcaaaacatctttcatctatattcgattgcatataag 35006306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 31639786 - 31639949
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc---------aacaaacaatcatggacgttcaat 109  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| |         | ||||||||| | || |||||||    
T  31639786 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcatccacaaaatgatcaaacaatcct-gatgttcaat 31639884  T
Q  110 caatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataag 174  Q
    |||||||||| ||| |||||||| | |||||||||||||||| || |||| | ||||||||||||    
T  31639885 caatctctatggaagattaaagagtgaatcaaaacatctttcatccatactcgattgcatataag 31639949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 38628320 - 38628481
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||||        | ||||||||| | ||  ||||||     
T  38628320 tttatataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcactctctttcacccatcaatgatcaaacaatcct-gattttcaatt 38628418  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| |||||||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  38628419 aatctctatggaatattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 38628481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 4330785 - 4330946
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||||        | ||||||||| | || |||||||     
T  4330785 tttatataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcactctctttcacccaccaatgatcaaacaatcct-gatgttcaatt 4330883  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||| ||||||| |  |||| | |||||||||||    
T  4330884 aatctctatggaagattaaagagtgaatcaaaatatctttcattcatactcgattgcatataa 4330946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 13479721 - 13479882
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctt----tcaccaac----aaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || |||||    ||||||||    |||||||| | || |||||||     
T  13479721 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcactcaccaacgattaaacaatcct-gatgttcaatt 13479819  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||| ||||||||||| |  |||| | |||||||||||    
T  13479820 aatctctatggaagattaaagagtgaatccaaacatctttcattcatactcgattgcatataa 13479882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 10522451 - 10522291
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttca----ccaac---aaacaatcatggacgttcaatca 111  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||    |||||    ||||||| | || ||||||| |    
T  10522451 tttaaataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccgccaacgatcaacaatcct-gatgttcaatta 10522353  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  10522352 atctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 10522291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 16312876 - 16312942
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  ||||||||||    
T  16312876 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcattctctttcacc 16312942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 44456097 - 44456258
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  44456097 tttatataaattttcttaaaatcttgattgcattcattatcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 44456195  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  44456196 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 44456258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 8034016 - 8034177
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactcttt----caccaa----caaacaatcatggacgttcaatc 110  Q
    |||||| |||||||||||||| |||||||||||||| |||||||||||||||  || ||||||    ||||||    ||||||||| | || |||||||     
T  8034016 tttatagaaattttcttaaaatcttgatttcattcactgtcactctaaaattccactctctttcatccaccaacgatcaaacaatcct-gatgttcaatt 8034114  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  8034115 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 8034177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 4072645 - 4072784
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  4072645 tttatataaattttcttaaaatcttgatttcactcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 4072743  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||||||| ||| |||||||| | |||||||| |||||||    
T  4072744 aatctctatggaagattaaagagtgaatcaaaatatctttc 4072784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 10554221 - 10554287
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||||||||| || ||||||||||    
T  10554221 tttatataaattatcttaatatcttgatttcattcattgtcactctaaaatttcaccctctttcacc 10554287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 7721793 - 7721950
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    ||||||||||||||||||||| ||||||    ||||||||||||||||||||  || |||||||||| || ||| ||||       | || ||||||| |    
T  7721793 tttatataaattttcttaaaatcttgat----ttcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaatta 7721888  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||| ||| |||||||| | ||||||| |||||||| |  |||| | |||||||||||    
T  7721889 atctctatggaagattaaagagtgaatcaaaccatctttcattcatactcgattgcatataa 7721950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 44799483 - 44799417
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||||||||| |||||| | |||||||||||||||||||||| |||||||  || ||||||||||    
T  44799483 tttatataaattatcttaatatcttgatttcattcattgtcactataaaattccactctctttcacc 44799417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 45442912 - 45442978
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||| |  || ||||||||||    
T  45442912 tttatataaattatcttaatatcttgatttcattcattgtcactctaaaactccactctctttcacc 45442978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 37094804 - 37094763
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  37094804 tttatataaattttcttaaaaccttaattttattcattgtca 37094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 932126 - 932177
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    |||||||||||||| || |||||||||||||| |||||  ||||||||||||    
T  932126 tttatataaatttttttgaaaccttgatttcactcattcccactctaaaatt 932177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 10639477 - 10639434
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  10639477 tttatataaattttcttaaaaccctaattttattcattgtcact 10639434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 927739 - 927698
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  927739 tttatataaattttcttaaaaccctaattttattcattgtca 927698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 1482607 - 1482566
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  1482607 tttatataaattttcttaaaaccctaattttattcattgtca 1482566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 3178981 - 3178940
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  3178981 tttatataaattttcttaaaaccctaattttattcattgtca 3178940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 13195532 - 13195573
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  13195532 tttatataaattttcttaaaaccctaattttattcattgtca 13195573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 15012533 - 15012492
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  15012533 tttatataaattttcttaaaaccctaattttattcattgtca 15012492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 25852731 - 25852772
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  25852731 tttatataaattttcttaaaaccctaattttattcattgtca 25852772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 32550956 - 32550997
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  32550956 tttatataaattttcttaaaaccctaattttattcattgtca 32550997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 34203045 - 34203004
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  34203045 tttatataaattttcttaaaaccctaattttattcattgtca 34203004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 35896496 - 35896455
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  35896496 tttatataaattttcttaaaaccctaattttattcattgtca 35896455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 43577673 - 43577632
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  43577673 tttatataaattttcttaaaaccctaattttattcattgtca 43577632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 44144150 - 44144109
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  44144150 tttatataaattttcttaaaaccctaattttattcattgtca 44144109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 31569041 - 31569081
Alignment:
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||||||||||| |||||||| | ||||||||||||||||    
T  31569041 aatctctatagaagattaaagagtgaatcaaaacatctttc 31569081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 39697157 - 39697197
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtc 59  Q
    ||||||||||||||||||||||| | |||| ||||||||||    
T  39697157 tttatataaattttcttaaaaccctaattttattcattgtc 39697197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 40658643 - 40658691
Alignment:
Q  103 gttcaatcaatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||||||||||||||| ||| |||||||| | |||||||| |||||||    
T  40658643 gttcaatcaatctctatggaagattaaagagtgaatcaaaatatctttc 40658691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 186
Target Start/End: Original strand, 43653012 - 43653144
Alignment:
Q  54 attgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcct 153  Q
    ||||| ||| |||| |||||| |||||||| | | ||| |||||||||  ||||||||||||| ||  || |||||||| | ||| ||||| |||||| |    
T  43653012 attgttactttaaatttttaccctctttcatctataaataatcatggatattcaatcaatctcaatgaaagattaaagagtgaattaaaacgtctttcat 43653111  T
Q  154 ctatacactattgcatataagcaattgaatttc 186  Q
    | |||  |||||||| ||| | || ||||||||    
T  43653112 ccatagtctattgcaaataggtaagtgaatttc 43653144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 35979349 - 35979518
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctcta 118  Q
    |||||||||||||| |||||||||||||||||||||||||  ||||||||||| || || || |||| ||||| ||||||||| ||||||||||||||||    
T  35979349 tttatataaatttttttaaaaccttgatttcattcattgttgctctaaaatttcacccttttacacccacaaataatcatggatgttcaatcaatctcta 35979448  T
Q  119 tagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
     | || |||||||| | |||||||| ||||||| || ||||  | ||||||||||| || ||||||||||    
T  35979449 aaaaagattaaagactgaatcaaaatatctttcatccatactatgttgcatataagtaagtgaatttctt 35979518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 1848320 - 1848551
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattg-tcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctct 117  Q
    |||||||||||||||||||||| || ||||||||||||  ||||| ||||| || || |||||||| |  || ||||||||||| ||||||||||| | |    
T  1848320 tttatataaattttcttaaaactttaatttcattcatttatcactttaaaacttcaccctctttcatccgcagacaatcatggatgttcaatcaatattt 1848419  T
Q  118 atagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt-annnnnnncaatgatgctagagtttcta 216  Q
    |||||| |||||||| |  |||||||||| |||| || ||||   |||||||||||| || ||| ||||||         ||||||||||||||||||      
T  1848420 atagaagattaaagagtggatcaaaacatatttcatccatacttgattgcatataagtaaatgagtttcttcttctttttcaatgatgctagagtttcat 1848519  T
Q  217 ttttattcttgttgttcaatgttgatatgtta 248  Q
    ||||  ||||||||||||| ||||||||||||    
T  1848520 tttttatcttgttgttcaacgttgatatgtta 1848551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 250
Target Start/End: Complemental strand, 32911184 - 32910951
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctcta 118  Q
    ||||||||||||||||||||   ||||||| ||||||||| |  ||||||||| |  |||||||| | | |||||||||| || |||||||||||||| |    
T  32911184 tttatataaattttcttaaacatttgattttattcattgttatgctaaaatttcattctctttcatccaaaaacaatcatcgatgttcaatcaatctcga 32911085  T
Q  119 tagaatatt--aaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt-annnnnnncaatgatgctagagtttct 215  Q
     | || |||  ||| ||| |||||||||||||||| |  |||| |||||||||||||| || ||||||||||         |||||||| | ||||||||    
T  32911084 caaaaaattaaaaaaaatgaatcaaaacatctttcattcatactctattgcatataagtaagtgaatttcttctttatattcaatgatgtttgagtttct 32910985  T
Q  216 attttattcttgttgttcaatgttgatatgttatg 250  Q
    ||||| ||||||||||||||  |||||||||||||    
T  32910984 atttt-ttcttgttgttcaacattgatatgttatg 32910951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 38459289 - 38459450
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  38459289 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 38459387  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  38459388 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 38459450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 42687132 - 42687293
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactcttt----caccaa----caaacaatcatggacgttcaatc 110  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| ||||||||| || ||||||    ||||||    ||||||||| | || |||||||     
T  42687132 tttacataaattttattaaaatcttgatttcattcattgtcacactaaaatttaactctctttcatccaccaacaatcaaacaatcct-gatgttcaatt 42687230  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||||||||||||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  42687231 aatctctatagaatattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 42687293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 38946645 - 38946484
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||  ||||||||| || ||| ||||       | || ||||||| |    
T  38946645 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactttctttcacccactaacgatcaaacaatcttgatgttcaatta 38946546  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  38946545 atctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 38946484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 44026439 - 44026278
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || |||||||||| || ||| ||||       | || ||||||| |    
T  44026439 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaatta 44026340  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||| ||| ||||| || | |||||||||||||||| |  |||| | |||||||||||    
T  44026339 atctctatggaagattaaggagtgaatcaaaacatctttcattcatactcgattgcatataa 44026278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 31792988 - 31793054
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  31792988 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacc 31793054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 44025550 - 44025484
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  44025550 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacc 44025484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 44696408 - 44696233
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||  | ||||||| |||||| ||||         || |||||||||    
T  44696408 tttatataaattttcttaaaac-ttgatttcattcattgtcattctaaaatttcaccatttttcacccacaaacgatcaaacaattctgatgttcaatca 44696310  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    |||||||| ||| |||||||| | ||||||||||||||||  | |||| | | |||||||||| || ||||||||||    
T  44696309 atctctatggaagattaaagagtgaatcaaaacatctttcaccgatactcaagtgcatataagtaaatgaatttctt 44696233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 4006614 - 4006453
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||||| |||| |||||||||||| |||||||||||||||||| || ||||||||||        | ||||||||||| || |||||||     
T  4006614 tttatataaattttctgaaaatcttgatttcattaattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcat-gatgttcaatt 4006516  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||| || ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  4006515 aatctcaatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 4006453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 44703984 - 44704145
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||| || ||||||||||        | ||||||||| | || |||||||     
T  44703984 tttatataaattttcttaaaatcttgatttcattcattatcactctaaaatttcactctctttcacccaccaacgaccaaacaatcct-gatgttcaatt 44704082  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| ||||||||   |||||||||||||||| |  |||| | |||||||||||    
T  44704083 aatctctatggaagattaaagagcgaatcaaaacatctttcattcatacccgattgcatataa 44704145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 38167764 - 38167900
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaat 113  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||        | ||||||||| | || ||||||| |||    
T  38167764 atataaattttcttaaaaatttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcct-gatgttcaattaat 38167862  T
Q  114 ctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    |||||| ||| |||||||| | ||||||||||||||||    
T  38167863 ctctatggaagattaaagagtcaatcaaaacatctttc 38167900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 6429 - 6363
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||| || ||||||||||    
T  6429 tttatataaattttcttaaaatctggatttcattcattgtcactctaaaatttcactctctttcacc 6363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 35329021 - 35329160
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||  |||||||||        | ||||||||| | || |||||||     
T  35329021 tttatataaattttcttaaaattttgatttcattcattgtcactctaaaatttcactttctttcacccaccaacgatcaaacaatcct-gatgttcaatt 35329119  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||||| | ||| |||||||| | ||||||||||||||||    
T  35329120 aatctctttggaagattaaagagtgaatcaaaacatctttc 35329160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 39713432 - 39713293
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||||||||| |  ||||||||||        | ||||||||||| || ||||||||    
T  39713432 tttatataaattttcttaaaatctttatttcattaattgtcactctaaaatttcaatctctttcacccacaaacgatcaaacaatcat-gatgttcaatc 39713334  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    |||  |||| ||| |||||||| | ||||||||||||||||    
T  39713333 aattcctatggaagattaaagagtgaatcaaaacatctttc 39713293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 28152233 - 28152155
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca 97  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||||||  || |||||||||| || ||||||||    
T  28152233 tttatataaattttcttaaaattttgatttcattcattgttactctaaaattccactctctttcacccaccaacaatca 28152155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 33772135 - 33772069
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||  || ||||||||||    
T  33772135 tttatataaattttcttaaaatcttgacttcattcattgtcactctaaaattccactctctttcacc 33772069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 12723260 - 12723116
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatc-----atggacgttcaatcaatctctatagaatatta 128  Q
    |||||| ||||||||||||||||||||||||||||||  || |||||||||| || ||| |||     ||  | ||||||| ||||||||| ||| ||||    
T  12723260 ttaaaatcttgatttcattcattgtcactctaaaattccactctctttcaccgaccaacgatcaaacaatccatgttcaattaatctctatggaagatta 12723161  T
Q  129 aagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||| | |||||||||||||||| |  |||| | |||||||||||    
T  12723160 aagagtgaatcaaaacatctttcattcatactcgattgcatataa 12723116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 40184756 - 40184678
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca 97  Q
    |||||||||||| |||||||||||| ||||||||||||| |||| |||||||  || |||||||||| || ||||||||    
T  40184756 tttatataaattatcttaaaacctttatttcattcattgacactttaaaattccaccctctttcacccactaacaatca 40184678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 43576105 - 43576144
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43576105 tttatataaattttcttaaaaccttgatttcattcattgt 43576144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 260
Target Start/End: Complemental strand, 44953757 - 44953582
Alignment:
Q  87 acaaacaatcatggacgttcaatcaatctctatagaatattaaagaataaatcaaaacatctttc-ctctatacactattgcatataagcaattgaattt 185  Q
    |||||||||||| || |||||||||||||||||| || |||||||| ||||||||| ||  |||| ||| |||| |||||| ||||||| || |||||||    
T  44953757 acaaacaatcatagatgttcaatcaatctctataaaagattaaagagtaaatcaaatcacttttcactc-atactctattggatataagtaagtgaattt 44953659  T
Q  186 ctt-annnnnnncaatgatgctagagtttcta-ttttattcttgttgttcaatgttgatatgttatgcagtttacaa 260  Q
    |||          ||||||||||||||||| | |||| ||| ||||| |||| |||||||||||||| | |||||||    
T  44953658 cttctttttgttaaatgatgctagagtttccattttttttcctgttgctcaacgttgatatgttatgaactttacaa 44953582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 188
Target Start/End: Original strand, 7988119 - 7988200
Alignment:
Q  107 aatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    ||||||||||||| ||| |||||||| | ||||||||| |||||| || ||||  |||||||||||||||| || |||||||    
T  7988119 aatcaatctctatggaagattaaagagtgaatcaaaacttctttcatccatactttattgcatataagcaagtgtatttctt 7988200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 41941314 - 41941475
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||| | |||| ||||||||| ||| ||||||||||||||||  || ||||||||||        | ||||||||||| || |||||||     
T  41941314 tttatataaattttttgaaaatcttgatttctttcgttgtcactctaaaattccactctctttcacccatcaacgatcaaacaatcat-gatgttcaatt 41941412  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||| |||||  || |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  41941413 aatttctatgaaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 41941475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 4230213 - 4230075
Alignment:
Q  42 ttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatcaatctctatagaatattaaagaat 134  Q
    |||||||||||||||||||| ||||||||| || |||||||||| || ||| ||||         || ||||||| ||||||||| ||| |||||||| |    
T  4230213 ttgatttcattcattgtcacactaaaatttcactctctttcacccaccaacgatcaaacaattctgatgttcaattaatctctatggaagattaaagagt 4230114  T
Q  135 aaatcaaaacatctttcctctatacactattgcatataa 173  Q
     |||||||||||||||| |  |||| | |||||||||||    
T  4230113 gaatcaaaacatctttcattcatactcgattgcatataa 4230075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 36056917 - 36057041
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaatctctatagaata 125  Q
    |||||| |||||||||||||||||||||  |||||||| || ||||||||||        | ||||||||| | || ||||||| ||||||||| ||| |    
T  36056917 ttaaaatcttgatttcattcattgtcacattaaaatttcactctctttcacccaccaacgatcaaacaatcct-gatgttcaattaatctctatggaaga 36057015  T
Q  126 ttaaagaataaatcaaaacatctttc 151  Q
    ||||||| | ||||||||||||||||    
T  36057016 ttaaagagtgaatcaaaacatctttc 36057041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 26991901 - 26991996
Alignment:
Q  79 tttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataag 174  Q
    ||||||| ||||| ||||||||    ||||||||||||||||||| ||| |||| | |||||||||||||||| |  |||| | ||||||||||||    
T  26991901 tttcacccacaaataatcatgggtaatcaatcaatctctatagaagattgaagagtgaatcaaaacatctttcgttcatactcaattgcatataag 26991996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 5346827 - 5346893
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||||||||| |||||| | |||||||||||||| ||||||| |||||||  || ||||||||||    
T  5346827 tttatataaattatcttaatatcttgatttcattcactgtcactataaaattccactctctttcacc 5346893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 38235268 - 38235144
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatcaatctctatagaatat 126  Q
    |||||| ||||||||||||||||||| ||||||||||  || |||||||||| || ||| ||||       | || ||||||| ||||||||| ||| ||    
T  38235268 ttaaaatcttgatttcattcattgtcgctctaaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaattaatctctatggaagat 38235169  T
Q  127 taaagaataaatcaaaacatctttc 151  Q
    |||||| | |||||||| |||||||    
T  38235168 taaagagtgaatcaaaatatctttc 38235144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 7969383 - 7969456
Alignment:
Q  103 gttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagca 176  Q
    ||||||||||||||||| ||| |||||||| | ||||||||| |||||| || ||||   ||||||||||||||    
T  7969383 gttcaatcaatctctatggaagattaaagagtgaatcaaaacttctttcatccatacttgattgcatataagca 7969456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 11266965 - 11266836
Alignment:
Q  29 ttttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaatctctata 120  Q
    |||| |||||| ||| ||||||||||||||||||||||||||  || ||| ||||||        | ||||||||| | || ||||||| |||||||||     
T  11266965 tttttttaaaatcttaatttcattcattgtcactctaaaattccactctcattcacccaccaacgatcaaacaatcct-gatgttcaattaatctctatc 11266867  T
Q  121 gaatattaaagaataaatcaaaacatctttc 151  Q
    ||| |||||||| | ||||||||||||||||    
T  11266866 gaagattaaagagtgaatcaaaacatctttc 11266836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 23356634 - 23356675
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  23356634 tttatataaattttcttaaaaccttaattttattcattgtca 23356675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 35606081 - 35606040
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  35606081 tttatataaattttcttaaaaccttaattttattcattgtca 35606040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 260
Target Start/End: Complemental strand, 16636189 - 16636053
Alignment:
Q  115 tctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttcttannnnnnncaatgatgctagagtttc 214  Q
    ||||||||| |||| ||| | ||||||||||| |||  || |||| |||||||||||||| |||||||||||||        |||||||||||||||||     
T  16636189 tctatagaagattatagagtgaatcaaaacatattta-tcaatactctattgcatataagtaattgaatttctt--ttttttcaatgatgctagagttt- 16636094  T
Q  215 tattttattcttgttgttcaatgttgatatgttatgcagtttacaa 260  Q
      |||| |||   |||||||| |||||||||||||||| |||||||    
T  16636093 --tttttttc---ttgttcaacgttgatatgttatgcactttacaa 16636053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 43576177 - 43576264
Alignment:
Q  78 ctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattg 166  Q
    |||||| | ||||||||||||||| |||||| ||||||| ||| |||| |||| | | |||||||||||||||| || |||| ||||||    
T  43576177 ctttcatccacaaacaatcatggatgttcaaccaatctccataaaataataaa-agtgaatcaaaacatctttcatccatactctattg 43576264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 3136575 - 3136618
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  3136575 tttatataaattttcttaaaaccctaattttattcattgtcact 3136618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 12713470 - 12713513
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  12713470 tttatataaattttcttaaaaccctaattttattcattgtcact 12713513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 26294491 - 26294534
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  26294491 tttatataaattttcttaaaaccctaattttattcattgtcact 26294534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 26307748 - 26307791
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  26307748 tttatataaattttcttaaaaccctaattttattcattgtcact 26307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 2827604 - 2827641
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcatt 56  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  2827604 tttatataaattctcttaaaatcttgatttcattcatt 2827641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 5599225 - 5599266
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  5599225 tttatataaattttcttaaaaccctaattttattcattgtca 5599266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 5636050 - 5636009
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  5636050 tttatataaattttcttaaaaccctaattttattcattgtca 5636009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 8376961 - 8376920
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  8376961 tttatataaattttcttaaaaccctaattttattcattgtca 8376920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 11588842 - 11588801
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  11588842 tttatataaattttcttaaaaccctaattttattcattgtca 11588801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 15840535 - 15840494
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  15840535 tttatataaattttcttaaaaccctaattttattcattgtca 15840494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 17602389 - 17602348
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  17602389 tttatataaattttcttaaaaccctaattttattcattgtca 17602348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 26290111 - 26290152
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  26290111 tttatataaattttcttaaaaccctaattttattcattgtca 26290152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 26303368 - 26303409
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  26303368 tttatataaattttcttaaaaccctaattttattcattgtca 26303409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 26315362 - 26315403
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  26315362 tttatataaattttcttaaaaccctaattttattcattgtca 26315403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 34564396 - 34564437
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  34564396 tttatataaattttcttaaaaccctaattttattcattgtca 34564437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 34918178 - 34918137
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  34918178 tttatataaattttcttaaaaccctaattttattcattgtca 34918137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 39366024 - 39365983
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  39366024 tttatataaattttcttaaaaccctaattttattcattgtca 39365983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 186
Target Start/End: Original strand, 16584500 - 16584635
Alignment:
Q  50 attcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaagaataaatcaaaacatctt 149  Q
    ||||||||| | |||||| ||| ||  ||||||||  ||||||| | |||||  |||||||||| || ||| |||||||||||||  |||||||| |||     
T  16584500 attcattgtaagtctaaactttcaccatctttcacatacaaacatt-atggatattcaatcaatttcaataaaatattaaagaatggatcaaaacgtcta 16584598  T
Q  150 tcctctatacactattgcatataagcaattgaatttc 186  Q
    || || |||  |||||||||||| | || ||||||||    
T  16584599 tcatccataatctattgcatataggtaagtgaatttc 16584635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 24822066 - 24822106
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtc 59  Q
    ||||||||||||||||||||||| | |||| ||||||||||    
T  24822066 tttatataaattttcttaaaaccctaattttattcattgtc 24822106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 43663683 - 43663723
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtc 59  Q
    ||||||||||||||||||||||| | |||| ||||||||||    
T  43663683 tttatataaattttcttaaaaccctaattttattcattgtc 43663723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 45926238 - 45926095
Alignment:
Q  32 tcttaaaaccttgatttcatt-cattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaa 130  Q
    |||||||||||| |||||||| |||||||||||| |||||  || ||||||||||  |||||||||||| | ||||||||||||||||||||| ||| ||    
T  45926238 tcttaaaaccttaatttcatttcattgtcactctcaaattgcaccctctttcacccgcaaacaatcatgtatgttcaatcaatctctatagaagattgaa 45926139  T
Q  131 gaataaatcaaaacatctttcctctatacactattgcatataag 174  Q
    || | |||||||||||||||| || |||| | ||||||||||||    
T  45926138 gagtgaatcaaaacatctttcatccatactcgattgcatataag 45926095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 9263616 - 9263494
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctcta 118  Q
    |||||||||||||||||||||| ||||||||| || ||| ||||||||||||| |   ||||||| | ||||||||||||| | ||||||||||||||||    
T  9263616 tttatataaattttcttaaaactttgatttcactccttgccactctaaaatttcatcatctttcatccacaaacaatcatgaatgttcaatcaatctcta 9263517  T
Q  119 tagaatattaaagaataaatcaa 141  Q
    |||||||||||||| | ||||||    
T  9263516 tagaatattaaagagtgaatcaa 9263494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 6015849 - 6016010
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaac--------aaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||  || |||||||||| ||        |||||||||| || |||||||     
T  6015849 tttatataaattttcttaaaatcttgatttcattcattttcactctaaaattccactctctttcacccaccaacgattaaacaatcat-gatgttcaatt 6015947  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||||||| |||||||| | |||||||||||||||| |  |||| |||||||||||||    
T  6015948 aatctctatagaagattaaagagtcaatcaaaacatctttcattcatactctattgcatataa 6016010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 32562264 - 32562198
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  32562264 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacc 32562198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 17475224 - 17475063
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  17475224 tttatataaattttcttaaaatcttgatttcattcattttcactctaaaattccactctctttcacccattaacgatcaaacaatcct-gatgttcaatt 17475126  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||||||| |||||||| | ||| |||||||||||| |  |||| | |||||||||||    
T  17475125 aatctctatagaagattaaagagtgaataaaaacatctttcattcatactcgattgcatataa 17475063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 48934127 - 48933966
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  48934127 tttatataaatttacttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 48934029  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  48934028 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 48933966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 51001267 - 51001428
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactcttt----caccaa----caaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  ||||||    ||||||    ||||||||| | || |||||||     
T  51001267 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcattctctttcatccaccaacgatcaaacaatcct-gatgttcaatt 51001365  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||  | |||||||||||||||| |  |||| | |||||||||||    
T  51001366 aatctctatggaagattaaagcgtgaatcaaaacatctttcattcatactcgattgcatataa 51001428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 8113108 - 8113269
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||  || |||||||||| || ||| ||||       | || ||||||| |    
T  8113108 tttatataaattttcttaaaatcttgatttcattcattgtcactcaaaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaatta 8113207  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    || ||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  8113208 atgtctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 8113269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 32117308 - 32117447
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  32117308 tttatataaattttcttaaaattttgatttcattcattgtcactctaaaattccactctctttcacctatcaacgatcaaacaatcct-gatgttcaatt 32117406  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||||||| ||| |||||||| | ||||||||||||||||    
T  32117407 aatctctatggaagattaaagagtgaatcaaaacatctttc 32117447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 9639981 - 9640047
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||    
T  9639981 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacc 9640047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 13073951 - 13073885
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| || ||||||||||    
T  13073951 tttatataaattttcttaaaatcttgatttcatttattgtcactctaaaatttcactctctttcacc 13073885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 24526994 - 24527074
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttac--actctttcaccaacaaacaatca 97  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||    |||||||||||||||||||||    
T  24526994 tttatataaattttcttaaaatctttatttcattcattgtcactctaaaatttcactatatctttcaccaacaaacaatca 24527074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 26308415 - 26308254
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||  ||  |||||||||        | ||||||||| | || |||||||     
T  26308415 tttatataaattttcttaaaatcttgatttcattcattgtcactttaaaattccactttctttcacccaccaacgatcaaacaatcct-gatgttcaatt 26308317  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  26308316 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 26308254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 3486524 - 3486458
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||||||||  |||||||||||||    
T  3486524 tttatataaattatcttaatatcttgatttcattcattgtcactctaaaattccacactctttcacc 3486458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 7009801 - 7009723
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca 97  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||  |  |||||||||| |||||| ||||    
T  7009801 tttatataaattttcttaaaatctttatttcattcattgtcactctaaaattccaatctctttcacccacaaacgatca 7009723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 45942277 - 45942139
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||  ||  |||||||||        | ||||||||| | || |||||||     
T  45942277 tttatattaattttcttaaaatcttgatttcattcattgtcactctaaaattccactatctttcacccatcaacgatcaaacaatcct-gatgttcaatt 45942179  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatcttt 150  Q
    ||||| ||||||| |||||||| | |||||||||||||||    
T  45942178 aatctatatagaagattaaagagtgaatcaaaacatcttt 45942139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 5673710 - 5673571
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    |||| |||| ||||||||||| |||||||| |||||||||||| ||||||||| || |||||||||| || ||||||||         || ||||||| |    
T  5673710 tttacataatttttcttaaaatcttgattttattcattgtcacactaaaatttcactctctttcacccaccaacaatcaaacaatcctgatgttcaatta 5673611  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    |||||||| ||| |||||||| | ||||||||||||||||    
T  5673610 atctctatggaagattaaagagtgaatcaaaacatctttc 5673571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 23443532 - 23443693
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactcttt----caccaa----caaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||||||||||  |  ||||||    ||||||    ||||||||| | || |||||||     
T  23443532 tttatataaattttcttaaaatcttaatttcattcattatcactctaaaattacaatctctttcaaccaccaacgatcaaacaatcct-gatgttcaatt 23443630  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  23443631 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 23443693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 17702838 - 17702699
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaac--------aaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||||||||  || |||||||||| ||        |||||||  | || |||||||     
T  17702838 tttatataaattttcttaaaatcttaatttcattaattgtcactctaaaattccactctctttcacccaccaacgattaaacaattct-gatgttcaatt 17702740  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||||||| ||| |||||||| | ||||||||||||||||    
T  17702739 aatctctatcgaagattaaagagtgaatcaaaacatctttc 17702699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 24663574 - 24663625
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  24663574 tttatataaattttcttaaaatcttgatttcattcattgtcactttaaaatt 24663625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 29921125 - 29921283
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaat 113  Q
    |||||||||||||||||| ||| |||||||  |||||||||||||||||| || ||||||||||        | ||||||||| | || ||||||| |||    
T  29921125 atataaattttcttaaaatcttaatttcatctattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcct-gatgttcaattaat 29921223  T
Q  114 ctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||| ||| ||| |||| | |||||||||||||||| |  |||| | |||||||||||    
T  29921224 ctctatggaagattgaagagtgaatcaaaacatctttcattcatactcgattgcatataa 29921283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 1442065 - 1441980
Alignment:
Q  103 gttcaatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaatttctt 188  Q
    |||||||||||||||||  || |||||||||| ||||||||||| |||| || |||| | |||||||||||| || ||||||||||    
T  1442065 gttcaatcaatctctatgaaagattaaagaatgaatcaaaacatatttcatccatactcgattgcatataagtaaatgaatttctt 1441980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 40499381 - 40499220
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||| ||| |||| |||||||||| ||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  40499381 tttatataaattttctttaaatcttgctttcattcatcgtcactctaaaattccactctctttcacccactaacgatcaaacaatcct-gatgttcaatt 40499283  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||||  || |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  40499282 aatctctatgaaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 40499220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 151
Target Start/End: Complemental strand, 1702624 - 1702508
Alignment:
Q  42 ttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatcaatctctatagaatattaaagaat 134  Q
    ||||||||||| |||||||||||||||||| || |||||||||| || ||||||||       | || ||||||| ||| ||||| ||| ||||||||||    
T  1702624 ttgatttcatttattgtcactctaaaatttcactctctttcacccaccaacaatcaaacaatcttgatgttcaattaatttctatggaagattaaagaat 1702525  T
Q  135 aaatcaaaacatctttc 151  Q
     |||||||||| |||||    
T  1702524 gaatcaaaacacctttc 1702508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 19247150 - 19247296
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaatctctatagaata 125  Q
    |||||| ||||||||||||| ||||||||||||||||  || ||||||||||        | ||||||||||| || ||||||| ||||||||| ||| |    
T  19247150 ttaaaatcttgatttcattcgttgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcat-gatgttcaattaatctctatggaaga 19247248  T
Q  126 ttaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||| | | |||||||||||||||| |  |||| | |||||||||||    
T  19247249 ttaaatagtgaatcaaaacatctttcattcatactcgattgcatataa 19247296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 51547053 - 51547139
Alignment:
Q  45 atttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatattaaag 131  Q
    |||||||||||| ||  | |||||||| || |||||||||| ||||||||| ||||| |||||||||| || ||||||| |||||||    
T  51547053 atttcattcattatcgttttaaaatttcaccctctttcacccacaaacaattatggatgttcaatcaagctatatagaagattaaag 51547139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 19513452 - 19513625
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||| | |||| ||||||||||| |||||||||| |||||||  || ||||||||||        | ||||||||| | || |||||||     
T  19513452 tttatataaattttatgaaaatcttgatttcatgcattgtcactttaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 19513550  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataagcaattgaattt 185  Q
    ||||| |||  || |||||||| | |||||||||||||||| |  |||| | ||||||||||| ||| |||||||    
T  19513551 aatctttatgtaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataaacaagtgaattt 19513625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 32087302 - 32087164
Alignment:
Q  42 ttgatttcattcattgtcactctaaaattttacactctttca----ccaac----aaacaatcatggacgttcaatcaatctctatagaatattaaagaa 133  Q
    |||||||||||||||||||| ||||||||| || ||||||||    |||||    |||||||| || | ||||||| ||||||||| ||| ||||||||     
T  32087302 ttgatttcattcattgtcacactaaaatttcactctctttcatccaccaacgatcaaacaatcctg-atgttcaattaatctctatggaagattaaagag 32087204  T
Q  134 taaatcaaaacatctttcctctatacactattgcatataa 173  Q
    | |||||||||||||||| |  |||| | |||||||||||    
T  32087203 tgaatcaaaacatctttcattcatactcgattgcatataa 32087164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 46290958 - 46291096
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||| ||||||  ||||||||||| |||||||||||||||||  |  ||||||||||        | ||||||||| | || |||||||     
T  46290958 tttatataaatttt-ttaaaattttgatttcatttattgtcactctaaaattacaatctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 46291055  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||||||| ||| |||||||| | ||||||||||||||||    
T  46291056 aatctctatggaagattaaagagtgaatcaaaacatctttc 46291096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 41713656 - 41713518
Alignment:
Q  42 ttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaatctctatagaatattaaagaa 133  Q
    |||||||||||||||||||| ||||||||| || ||||||||||        | ||||||||| | || ||||||| ||||| ||| ||| ||||||||     
T  41713656 ttgatttcattcattgtcacactaaaatttcactctctttcacccaccaacgatcaaacaatcct-gatgttcaattaatctatatggaagattaaagag 41713558  T
Q  134 taaatcaaaacatctttcctctatacactattgcatataa 173  Q
    | |||||||||||||||| |  |||| | |||||||||||    
T  41713557 tgaatcaaaacatctttcattcatactcgattgcatataa 41713518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 1701390 - 1701462
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca 97  Q
    ||||||||||||||||||||||||||| ||||||| |||||   || ||| || |||||||||| |||||| ||||    
T  1701390 atataaattttcttaaaaccttgattttattcattatcact---aagtttcaccctctttcacccacaaacgatca 1701462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 40400766 - 40400723
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  40400766 tttatataaattttcttaaaaccctaattttattcattgtcact 40400723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 2137713 - 2137754
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  2137713 tttatataaattttcttaaaaccctaattttattcattgtca 2137754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 2482004 - 2482045
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  2482004 tttatataaattttcttaaaaccctaattttattcattgtca 2482045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 6653850 - 6653809
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  6653850 tttatataaattttcttaaaaccctaattttattcattgtca 6653809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 11172697 - 11172738
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  11172697 tttatataaattttcttaaaaccctaattttattcattgtca 11172738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 13234673 - 13234714
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  13234673 tttatataaattttcttaaaaccctaattttattcattgtca 13234714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 15941584 - 15941543
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  15941584 tttatataaattttcttaaaaccctaattttattcattgtca 15941543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 18909915 - 18909874
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||| ||| |||| |||||||||||    
T  18909915 tttatataaattttcttaaaatcttaattttattcattgtca 18909874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 24317920 - 24317879
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  24317920 tttatataaattttcttaaaaccctaattttattcattgtca 24317879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 26163873 - 26163914
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  26163873 tttatataaattttcttaaaaccctaattttattcattgtca 26163914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 34270115 - 34270156
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  34270115 tttatataaattttcttaaaaccctaattttattcattgtca 34270156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 34276350 - 34276391
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  34276350 tttatataaattttcttaaaaccctaattttattcattgtca 34276391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 39568729 - 39568770
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  39568729 tttatataaattttcttaaaaccctaattttattcattgtca 39568770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 39983111 - 39983070
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  39983111 tttatataaattttcttaaaaccctaattttattcattgtca 39983070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 40536000 - 40536041
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  40536000 tttatataaattttcttaaaaccctaattttattcattgtca 40536041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 12602748 - 12602696
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattt 71  Q
    |||||||||||||| | ||||  ||||||||||| ||||||||| ||||||||    
T  12602748 tttatataaattttttgaaaattttgatttcatttattgtcactataaaattt 12602696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 6733487 - 6733389
Alignment:
Q  29 ttttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatggacgttcaatcaatctctatagaatatta 128  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||| ||| ||| | ||||||||||||||||||||| ||||    
T  6733487 ttttcttaaaaccttgatttcattcattgtcactctaaaatttcaca-tctttcacccacaaataattatgaatgttcaatcaatctctatagaagatta 6733389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 7339693 - 7339532
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||        | ||||||||||| || |||||||     
T  7339693 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcat-gatgttcaatt 7339595  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||  ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  7339594 aatctctaaggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 7339532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 24478302 - 24478141
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaa--------caaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||        ||||||||| | || |||||||     
T  24478302 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcaccaaccaacgatcaaacaatcct-gatgttcaatt 24478204  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||| | | |||||||||||||||| |  |||| | |||||||||||    
T  24478203 aatctctatggaagattaaatagtgaatcaaaacatctttcattcatactcgattgcatataa 24478141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 37106898 - 37106737
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| || |||||||||| || ||| ||||       | || ||||||| |    
T  37106898 tttatataaattttcttaaaatcttgatttcatttattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcttgatgttcaatta 37106799  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  37106798 atctctatggaagattaaagagtgaatcaaaacatctttcattcatactcaattgcatataa 37106737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 10665367 - 10665528
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||        | ||||||||| | || |||||||     
T  10665367 tttatataaattttcttaaaatcttattttcattcattgtcactctaaaattttactctctttcacccatcaacgatcaaacaatcct-gatgttcaatt 10665465  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  10665466 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 10665528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 18865446 - 18865288
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaat 113  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||||        | ||||||||| | || ||||||| |||    
T  18865446 atataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcct-gatgttcaattaat 18865348  T
Q  114 ctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  18865347 ctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 18865288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 40740039 - 40739881
Alignment:
Q  22 atataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaat 113  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||||        | ||||||||| | || ||||||| |||    
T  40740039 atataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcct-gatgttcaattaat 40739941  T
Q  114 ctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  40739940 ctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 40739881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 6246133 - 6245972
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |  ||||||||||        | ||||||||| | || |||||||     
T  6246133 tttatataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcattctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 6246035  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  6246034 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatacccgattgcatataa 6245972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 13210251 - 13210317
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||    
T  13210251 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacc 13210317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 41881084 - 41881150
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||    
T  41881084 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacc 41881150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 4622066 - 4621905
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |  ||||||||||        | ||||||||| | || |||||||     
T  4622066 tttatataaatttttttaaaatcttgatttcatccattgtcactctaaaatttcattctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 4621968  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  4621967 aatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 4621905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 10553068 - 10552907
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||| || ||| ||||||        | ||||||||| | || |||||||     
T  10553068 tttatataaatttttttaaaatcttgatttcattcattgtcactctaaaatttcactctcattcacccaccaacgatcaaacaatcgt-gatgttcaatt 10552970  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| |  ||||||||||||||| |  |||| | |||||||||||    
T  10552969 aatctctatggaagattaaagagtggatcaaaacatctttcattcatactcgattgcatataa 10552907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 36294748 - 36294684
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttca 83  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||| || ||||||||    
T  36294748 tttatataaattttcttaaaatcttgatttcattcattttcactctaaaatttcactctctttca 36294684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 27309802 - 27309724
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca 97  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||||||||  || |||||||||| | |||||||||    
T  27309802 tttatataaattatcttaatatcttgatttcattcattgtcactctaaaattccactctctttcacccagaaacaatca 27309724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 37274003 - 37274069
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||  || ||||||||||    
T  37274003 tttatataaattttcttataatcttgatttcattcattgtcactctaaaattccactctctttcacc 37274069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 15271909 - 15272070
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  15271909 tttatataaaattttttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 15272007  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||||| ||| |||||||| | ||||||||||| |||| |  |||| | |||||||||||    
T  15272008 aatctctatggaagattaaagagtgaatcaaaacatttttcattcatactcgattgcatataa 15272070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 3123573 - 3123501
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaa 91  Q
    ||||||||| || |||||||||||||||||||||||| |||| |||||||||| || |||||||||| |||||    
T  3123573 tttatataatttctcttaaaaccttgatttcattcatcgtcattctaaaatttcactctctttcacccacaaa 3123501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 18522884 - 18522833
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  18522884 tttatatatattttcttaaaatcttgatttcattcattgtcactctaaaatt 18522833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 42436551 - 42436697
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaa--------caaacaatcatggacgttcaatcaatctctatagaata 125  Q
    |||||| ||| ||||||||||||||||| ||||||||| || |||||||||| |        |||||||||||| | ||||||| ||||||||| ||| |    
T  42436551 ttaaaatcttaatttcattcattgtcacactaaaatttcactctctttcacccatcaacgatcaaacaatcatg-atgttcaattaatctctatggaaga 42436649  T
Q  126 ttaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  42436650 ttaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 42436697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 43547819 - 43547874
Alignment:
Q  42 ttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca 97  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||| ||| ||||    
T  43547819 ttgatttcattcattgtcacactaaaatttcactctctttcaccaaccaacgatca 43547874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 8233426 - 8233313
Alignment:
Q  45 atttcattcattgtcactctaaaattttacactctttcaccaac--------aaacaatcatggacgttcaatcaatctctatagaatattaaagaataa 136  Q
    ||||||||||||||||||||||||||| || || || |||| ||        ||||||||||| | ||||||| ||||||||| ||| |||||||| | |    
T  8233426 atttcattcattgtcactctaaaatttcactcttttacacccaccaacgatcaaacaatcatg-atgttcaattaatctctatggaagattaaagagtga 8233328  T
Q  137 atcaaaacatctttc 151  Q
    |||||||||||||||    
T  8233327 atcaaaacatctttc 8233313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 31485526 - 31485478
Alignment:
Q  21 tatataaattttcttaaaaccttgatttcattcattgtcactctaaaatt 70  Q
    |||||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  31485526 tatatatatttt-ttaaaatcttgatttcattcattgtcactctaaaatt 31485478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 31499694 - 31499649
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactct 64  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||||    
T  31499694 tttatataaattttcttaaaaacttgatttcatttattttcactct 31499649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 18979332 - 18979186
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatcatg-------gacgttcaatcaatctctatagaatat 126  Q
    |||||| |||||||| |||||||||||| |||||| || || |||||||||| || ||| ||||         || ||||||| ||||||||| ||| ||    
T  18979332 ttaaaatcttgattttattcattgtcacactaaaacttcactctctttcacccaccaacgatcaaacaattctgatgttcaattaatctctatggaagat 18979233  T
Q  127 taaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    |||||| | |||||||||||||||| |  |||| | |||||||||||    
T  18979232 taaagagtgaatcaaaacatctttcattcatactcgattgcatataa 18979186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 37341700 - 37341576
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatcaatctctatagaata 125  Q
    |||||| |||||||||||||||||||||  |||||||| || ||||||||||        | ||||||||| | || ||||||| |||||||||  || |    
T  37341700 ttaaaatcttgatttcattcattgtcacattaaaatttcactctctttcacccaccaacgatcaaacaatcct-gatgttcaattaatctctatgaaaga 37341602  T
Q  126 ttaaagaataaatcaaaacatctttc 151  Q
    ||||||| | ||||||||||||||||    
T  37341601 ttaaagagtgaatcaaaacatctttc 37341576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 38769175 - 38769011
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcat----tgtcactctaaaattttacactcttt----caccaa----caaacaatcatggacgttc 106  Q
    ||||||||||||||||||||| ||| |||||||||||    ||||||| |||||||| || ||||||    ||||||    ||||||||| | || ||||    
T  38769175 tttatataaattttcttaaaatctt-atttcattcattgtctgtcactttaaaatttcactctcttttacccaccaacgatcaaacaatcct-gatgttc 38769078  T
Q  107 aatcaatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||| ||||||||| ||| |||||||  | |||||||||||||||| |  |||| | |||||||||||    
T  38769077 aattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatactcgattgcatataa 38769011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 43517636 - 43517679
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcact 62  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  43517636 tttatataaattttcttaaaaccctaattttattcattgtcact 43517679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 8048053 - 8048087
Alignment:
Q  34 ttaaaaccttgatttcattcattgtcactctaaaa 68  Q
    |||||| ||||||||||||||||||||||||||||    
T  8048053 ttaaaatcttgatttcattcattgtcactctaaaa 8048087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 4155488 - 4155529
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  4155488 tttatataaattttcttaaaaccctaattttattcattgtca 4155529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 6469047 - 6469088
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  6469047 tttatataaattttcttaaaaccctaattttattcattgtca 6469088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 15021238 - 15021205
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcatt 52  Q
    ||||||||||||||||||||| ||||||||||||    
T  15021238 tttatataaattttcttaaaatcttgatttcatt 15021205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 33281593 - 33281552
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  33281593 tttatataaattttcttaaaaccctaattttattcattgtca 33281552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 38759738 - 38759779
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  38759738 tttatataaattttcttaaaaccctaattttattcattgtca 38759779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 43293027 - 43293068
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  43293027 tttatataaattttcttaaaaccctaattttattcattgtca 43293068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 70
Target Start/End: Original strand, 12188600 - 12188628
Alignment:
Q  42 ttgatttcattcattgtcactctaaaatt 70  Q
    |||||||||||||||||||||||||||||    
T  12188600 ttgatttcattcattgtcactctaaaatt 12188628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 6869 - 7008
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactcttt----caccaa----caaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||    ||||||    ||||||||| | || |||||||     
T  6869 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattacacactctttaaaccaccaacgatcaaacaatcct-gatgttcaatt 6967  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||||||| ||| |||||||| | ||||||||||||||||    
T  6968 aatctctatggaagattaaagagtgaatcaaaacatctttc 7008  T

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Target: scaffold0847 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 310 - 149
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  310 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattacactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 212  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttcctctatacactattgcatataa 173  Q
    ||||| ||| ||| |||||||| | |||||||||||||||| |  |||| | |||||||||||    
T  211 aatctatatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataa 149  T

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Target: scaffold0855 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 145 - 6
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc--------aacaaacaatcatggacgttcaatc 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||        | ||||||||| | || |||||||     
T  145 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattacactctctttcacccaccaacgatcaaacaatcct-gatgttcaatt 47  T
Q  111 aatctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    ||||| ||| ||| |||||||| | ||||||||||||||||    
T  46 aatctatatggaagattaaagagtgaatcaaaacatctttc 6  T

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Target: scaffold0007 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 200733 - 200668
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcac 84  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||||||||| || |||||||||    
T  200733 tttatataaattttcttaaaattttgattttattcattgtcactctaaaatttcactctctttcac 200668  T

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Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 156438 - 156479
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  156438 tttatataaattttcttaaaaccctaattttattcattgtca 156479  T

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Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 365137 - 365274
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcaccaacaaacaatca-------tggacgttcaatca 111  Q
    |||||||||||||| | ||||  |||||||||||||| |||||||||||||||  |||||||||||| || ||| ||||       | || ||||||| |    
T  365137 tttatataaattttttaaaaattttgatttcattcatcgtcactctaaaattt--cactctttcacccaccaacgatcaaacaatttcgatgttcaatta 365234  T
Q  112 atctctatagaatattaaagaataaatcaaaacatctttc 151  Q
    |||||||| ||| |||||||| | ||||||||||||||||    
T  365235 atctctatggaagattaaagagtgaatcaaaacatctttc 365274  T

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Target: scaffold0578 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 9486 - 9420
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtcactctaaaattttacactctttcacc 85  Q
    |||||||||||||| | |||| ||||||||||| |||||||||| |||||||  || ||||||||||    
T  9486 tttatataaattttatgaaaatcttgatttcatgcattgtcactttaaaattccactctctttcacc 9420  T

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Target: scaffold0438 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 1448 - 1489
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  1448 tttatataaattttcttaaaaccctaattttattcattgtca 1489  T

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Target: scaffold0391 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 4753 - 4712
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  4753 tttatataaattttcttaaaaccctaattttattcattgtca 4712  T

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Target: scaffold0062 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 41268 - 41227
Alignment:
Q  19 tttatataaattttcttaaaaccttgatttcattcattgtca 60  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  41268 tttatataaattttcttaaaaccctaattttattcattgtca 41227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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