View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5478_high_22 (Length: 418)

Name: NF5478_high_22
Description: NF5478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5478_high_22
NF5478_high_22
[»] chr5 (69 HSPs)
chr5 (1-412)||(1649129-1649540)
chr5 (275-396)||(25456276-25456399)
chr5 (228-335)||(25456500-25456608)
chr5 (280-399)||(35813517-35813638)
chr5 (213-305)||(35461470-35461563)
chr5 (307-396)||(17400793-17400884)
chr5 (280-393)||(4943118-4943235)
chr5 (213-335)||(25456279-25456402)
chr5 (280-357)||(28559454-28559532)
chr5 (213-305)||(16327132-16327225)
chr5 (215-399)||(4943112-4943302)
chr5 (294-409)||(37032931-37033046)
chr5 (288-362)||(10827143-10827217)
chr5 (213-305)||(16327309-16327400)
chr5 (220-305)||(32361202-32361288)
chr5 (351-396)||(6588102-6588147)
chr5 (268-396)||(16327098-16327230)
chr5 (213-305)||(17400579-17400671)
chr5 (213-278)||(40980713-40980778)
chr5 (217-335)||(1996145-1996265)
chr5 (213-273)||(28559302-28559362)
chr5 (307-396)||(35461436-35461527)
chr5 (288-396)||(35461662-35461773)
chr5 (210-278)||(35461703-35461771)
chr5 (252-338)||(35813547-35813635)
chr5 (210-278)||(38680632-38680700)
chr5 (268-364)||(5746129-5746227)
chr5 (330-396)||(23661939-23662005)
chr5 (330-396)||(23796565-23796631)
chr5 (213-278)||(17400817-17400882)
chr5 (213-278)||(23661881-23661946)
chr5 (213-278)||(23796624-23796689)
chr5 (268-396)||(28559235-28559367)
chr5 (213-278)||(36759665-36759730)
chr5 (338-396)||(40980711-40980771)
chr5 (280-396)||(1996142-1996261)
chr5 (225-277)||(2377327-2377379)
chr5 (213-277)||(20928086-20928150)
chr5 (288-394)||(25456501-25456609)
chr5 (213-245)||(37643064-37643096)
chr5 (213-305)||(4943171-4943265)
chr5 (213-302)||(14604102-14604193)
chr5 (234-335)||(35461667-35461770)
chr5 (330-396)||(35813508-35813575)
chr5 (213-339)||(10827315-10827444)
chr5 (268-396)||(16327304-16327434)
chr5 (275-394)||(23661881-23662001)
chr5 (275-394)||(23796569-23796689)
chr5 (220-278)||(32361170-32361228)
chr5 (221-278)||(1996371-1996428)
chr5 (213-305)||(5746129-5746222)
chr5 (309-393)||(14604072-14604154)
chr5 (213-278)||(19550101-19550166)
chr5 (213-323)||(23661894-23662004)
chr5 (213-323)||(23796566-23796676)
chr5 (330-396)||(25456335-25456403)
chr5 (213-278)||(28559446-28559511)
chr5 (213-278)||(33491574-33491639)
chr5 (217-278)||(35461438-35461499)
chr5 (337-399)||(36760814-36760878)
chr5 (338-393)||(12712424-12712480)
chr5 (222-305)||(12713106-12713190)
chr5 (338-393)||(12773688-12773744)
chr5 (222-305)||(12774370-12774454)
chr5 (234-278)||(16327388-16327432)
chr5 (293-395)||(23662109-23662215)
chr5 (234-278)||(28559237-28559281)
chr5 (280-396)||(32361168-32361287)
chr5 (213-277)||(35813568-35813632)
[»] chr2 (35 HSPs)
chr2 (280-396)||(36217162-36217278)
chr2 (213-335)||(31630070-31630192)
chr2 (280-396)||(25895134-25895253)
chr2 (268-394)||(31630281-31630409)
chr2 (213-335)||(44556528-44556652)
chr2 (215-340)||(25895128-25895255)
chr2 (268-396)||(9500905-9501037)
chr2 (268-396)||(5009379-5009509)
chr2 (213-335)||(5009384-5009506)
chr2 (214-341)||(36217155-36217281)
chr2 (330-409)||(43699448-43699529)
chr2 (213-278)||(4188624-4188689)
chr2 (213-278)||(25895186-25895251)
chr2 (213-278)||(33847703-33847768)
chr2 (214-335)||(5009161-5009289)
chr2 (330-394)||(12612448-12612514)
chr2 (330-394)||(31630127-31630193)
chr2 (213-305)||(1316069-1316162)
chr2 (233-278)||(4511638-4511683)
chr2 (310-394)||(5009160-5009247)
chr2 (213-278)||(29379903-29379968)
chr2 (213-278)||(36694524-36694589)
chr2 (213-278)||(43699449-43699514)
chr2 (330-396)||(44556585-44556653)
chr2 (213-335)||(9500908-9501032)
chr2 (331-396)||(33847703-33847770)
chr2 (293-400)||(1316031-1316141)
chr2 (275-396)||(31630067-31630189)
chr2 (337-396)||(25895132-25895193)
chr2 (252-323)||(4511597-4511670)
chr2 (214-278)||(1316037-1316101)
chr2 (330-396)||(1316095-1316163)
chr2 (214-278)||(3876949-3877013)
chr2 (217-277)||(11791813-11791873)
chr2 (210-278)||(30265382-30265450)
[»] scaffold0002 (2 HSPs)
scaffold0002 (293-393)||(12277-12377)
scaffold0002 (268-401)||(12046-12180)
[»] chr6 (38 HSPs)
chr6 (268-396)||(24059667-24059797)
chr6 (213-335)||(21598448-21598572)
chr6 (213-395)||(35050736-35050917)
chr6 (213-305)||(17136878-17136971)
chr6 (252-409)||(10356248-10356409)
chr6 (295-409)||(35225385-35225502)
chr6 (268-396)||(21598651-21598783)
chr6 (213-277)||(9982673-9982737)
chr6 (213-335)||(21598656-21598780)
chr6 (213-335)||(35225401-35225525)
chr6 (309-393)||(9982673-9982759)
chr6 (268-402)||(9982875-9983013)
chr6 (307-395)||(35050712-35050802)
chr6 (275-364)||(17136878-17136968)
chr6 (213-278)||(9982940-9983005)
chr6 (213-278)||(10356263-10356328)
chr6 (268-396)||(10356467-10356599)
chr6 (213-278)||(21598716-21598781)
chr6 (293-409)||(21598432-21598551)
chr6 (268-399)||(363984-364117)
chr6 (338-397)||(35225457-35225518)
chr6 (213-305)||(10356295-10356388)
chr6 (213-278)||(10356532-10356597)
chr6 (213-305)||(17342651-17342744)
chr6 (330-396)||(21598505-21598573)
chr6 (213-278)||(24059727-24059792)
chr6 (268-394)||(17342646-17342776)
chr6 (330-393)||(17136907-17136972)
chr6 (213-278)||(9982732-9982797)
chr6 (213-305)||(9982880-9982973)
chr6 (213-278)||(17136846-17136911)
chr6 (213-278)||(21598447-21598512)
chr6 (213-278)||(35050598-35050663)
chr6 (252-335)||(35050715-35050800)
chr6 (213-278)||(35225400-35225465)
chr6 (330-366)||(2761493-2761529)
chr6 (213-245)||(2761496-2761528)
chr6 (213-323)||(10356472-10356584)
[»] chr3 (68 HSPs)
chr3 (275-396)||(18020035-18020159)
chr3 (213-339)||(46337501-46337629)
chr3 (280-396)||(47069528-47069647)
chr3 (215-278)||(47891392-47891455)
chr3 (213-365)||(25848508-25848662)
chr3 (275-401)||(47891333-47891462)
chr3 (288-409)||(40286473-40286597)
chr3 (213-335)||(252049-252173)
chr3 (310-398)||(25848285-25848375)
chr3 (282-396)||(25848518-25848635)
chr3 (213-335)||(25848568-25848693)
chr3 (213-274)||(40286244-40286305)
chr3 (288-393)||(46337505-46337613)
chr3 (268-398)||(40209880-40210010)
chr3 (268-394)||(252048-252178)
chr3 (288-396)||(26724238-26724347)
chr3 (215-278)||(39541441-39541504)
chr3 (219-335)||(39714575-39714693)
chr3 (268-361)||(40286275-40286370)
chr3 (228-305)||(25848321-25848399)
chr3 (268-365)||(40209709-40209806)
chr3 (309-396)||(47573695-47573784)
chr3 (233-325)||(47891122-47891216)
chr3 (256-335)||(3169716-3169797)
chr3 (213-278)||(14964892-14964956)
chr3 (213-278)||(26724280-26724345)
chr3 (215-334)||(30954957-30955078)
chr3 (215-334)||(30970769-30970890)
chr3 (330-396)||(36667289-36667357)
chr3 (213-278)||(36667290-36667355)
chr3 (330-396)||(40286298-40286366)
chr3 (213-278)||(47069530-47069595)
chr3 (213-278)||(47573697-47573762)
chr3 (330-393)||(7607695-7607759)
chr3 (213-335)||(18020032-18020156)
chr3 (213-277)||(27768369-27768433)
chr3 (280-392)||(30954963-30955078)
chr3 (280-392)||(30970775-30970890)
chr3 (315-396)||(32186462-32186545)
chr3 (351-396)||(32186703-32186750)
chr3 (216-338)||(28813838-28813961)
chr3 (223-278)||(39253793-39253848)
chr3 (233-279)||(13903094-13903140)
chr3 (219-309)||(40209706-40209796)
chr3 (213-302)||(40286275-40286365)
chr3 (213-306)||(43650017-43650111)
chr3 (219-277)||(47573911-47573969)
chr3 (293-383)||(47891122-47891215)
chr3 (330-394)||(14624256-14624321)
chr3 (275-364)||(14624260-14624348)
chr3 (330-396)||(18020031-18020099)
chr3 (213-278)||(18020092-18020157)
chr3 (213-278)||(25848289-25848354)
chr3 (213-278)||(26976506-26976571)
chr3 (213-278)||(27768308-27768373)
chr3 (213-278)||(28814068-28814133)
chr3 (330-396)||(36900083-36900151)
chr3 (213-278)||(40286517-40286582)
chr3 (213-305)||(47573729-47573822)
chr3 (330-396)||(47891329-47891397)
chr3 (213-305)||(47891330-47891423)
chr3 (234-306)||(50332664-50332737)
chr3 (213-278)||(50332703-50332768)
chr3 (268-383)||(36375008-36375124)
chr3 (213-335)||(36900084-36900208)
chr3 (343-394)||(39714642-39714694)
chr3 (234-278)||(45131441-45131485)
chr3 (215-325)||(47069541-47069653)
[»] chr8 (40 HSPs)
chr8 (213-328)||(15563855-15563971)
chr8 (280-396)||(27128093-27128212)
chr8 (280-396)||(41151405-41151524)
chr8 (213-323)||(27127892-27128001)
chr8 (213-335)||(6220393-6220517)
chr8 (293-364)||(24083263-24083334)
chr8 (280-414)||(9399798-9399935)
chr8 (215-277)||(41151679-41151741)
chr8 (268-396)||(24909609-24909741)
chr8 (293-394)||(27052625-27052729)
chr8 (222-335)||(27052613-27052728)
chr8 (213-336)||(41151616-41151742)
chr8 (268-396)||(20209465-20209597)
chr8 (213-305)||(20209470-20209563)
chr8 (268-396)||(20229173-20229305)
chr8 (213-305)||(20229178-20229271)
chr8 (275-396)||(24827357-24827481)
chr8 (213-305)||(24909614-24909707)
chr8 (213-278)||(24909674-24909739)
chr8 (252-363)||(27052443-27052556)
chr8 (213-278)||(41151407-41151472)
chr8 (280-396)||(6220401-6220520)
chr8 (213-304)||(27052443-27052535)
chr8 (213-308)||(36053057-36053153)
chr8 (214-305)||(41151439-41151531)
chr8 (343-398)||(9400109-9400166)
chr8 (306-393)||(27052471-27052560)
chr8 (268-396)||(27127878-27128006)
chr8 (307-394)||(27855559-27855648)
chr8 (330-397)||(22813116-22813176)
chr8 (345-393)||(24083256-24083305)
chr8 (228-314)||(24083257-24083344)
chr8 (275-402)||(6220177-6220307)
chr8 (338-396)||(27128092-27128153)
chr8 (213-278)||(24827359-24827424)
chr8 (213-278)||(27052664-27052729)
chr8 (268-394)||(36053052-36053181)
chr8 (330-393)||(15563848-15563912)
chr8 (343-396)||(27052616-27052671)
chr8 (293-393)||(38414597-38414699)
[»] chr7 (38 HSPs)
chr7 (221-340)||(6222078-6222198)
chr7 (213-335)||(11975451-11975574)
chr7 (213-278)||(29710322-29710387)
chr7 (213-305)||(30869610-30869703)
chr7 (213-325)||(46713224-46713337)
chr7 (280-396)||(6222080-6222198)
chr7 (213-340)||(27576541-27576670)
chr7 (252-396)||(29710320-29710467)
chr7 (216-305)||(27280822-27280912)
chr7 (216-278)||(41666357-41666419)
chr7 (330-396)||(6694739-6694807)
chr7 (213-278)||(6694740-6694805)
chr7 (330-396)||(11975507-11975575)
chr7 (213-305)||(27280648-27280741)
chr7 (268-396)||(27576536-27576668)
chr7 (268-396)||(29710525-29710657)
chr7 (268-396)||(44293977-44294109)
chr7 (213-305)||(44293982-44294075)
chr7 (213-312)||(4048423-4048523)
chr7 (270-365)||(30662188-30662284)
chr7 (307-396)||(42312759-42312850)
chr7 (280-409)||(11975659-11975791)
chr7 (213-278)||(27280879-27280944)
chr7 (213-340)||(29710530-29710659)
chr7 (213-278)||(30662157-30662222)
chr7 (213-278)||(31453052-31453117)
chr7 (213-277)||(4048205-4048269)
chr7 (213-335)||(6694534-6694657)
chr7 (215-317)||(11975653-11975757)
chr7 (280-396)||(27280827-27280946)
chr7 (293-396)||(30869631-30869737)
chr7 (330-393)||(40951853-40951918)
chr7 (362-396)||(41666204-41666238)
chr7 (213-278)||(42313061-42313127)
chr7 (237-274)||(3198219-3198256)
chr7 (213-278)||(42312761-42312826)
chr7 (213-277)||(40951854-40951918)
chr7 (219-306)||(42313007-42313095)
[»] chr1 (30 HSPs)
chr1 (213-335)||(26879611-26879735)
chr1 (213-305)||(7489933-7490026)
chr1 (294-396)||(40892532-40892636)
chr1 (268-335)||(1173075-1173142)
chr1 (228-393)||(7489902-7490071)
chr1 (215-277)||(52913034-52913096)
chr1 (213-278)||(18608640-18608705)
chr1 (213-335)||(18608789-18608913)
chr1 (292-395)||(6314295-6314397)
chr1 (293-396)||(26879632-26879738)
chr1 (268-396)||(33650398-33650531)
chr1 (268-364)||(52913173-52913272)
chr1 (249-335)||(6314297-6314382)
chr1 (309-396)||(7489959-7490048)
chr1 (213-305)||(52913173-52913267)
chr1 (338-398)||(18204930-18204991)
chr1 (330-396)||(18608638-18608706)
chr1 (213-278)||(26879671-26879736)
chr1 (213-278)||(33650671-33650736)
chr1 (213-278)||(34173320-34173385)
chr1 (213-278)||(40892569-40892634)
chr1 (293-393)||(18608810-18608913)
chr1 (333-396)||(40892512-40892576)
chr1 (288-399)||(50727597-50727712)
chr1 (280-394)||(18204931-18205045)
chr1 (213-278)||(2633366-2633431)
chr1 (213-278)||(33650400-33650465)
chr1 (213-335)||(33650401-33650526)
chr1 (280-396)||(33650619-33650738)
chr1 (213-305)||(52913065-52913160)
[»] chr4 (59 HSPs)
chr4 (213-305)||(41083088-41083181)
chr4 (213-335)||(45038386-45038510)
chr4 (330-393)||(2787950-2788013)
chr4 (268-409)||(41083041-41083186)
chr4 (268-364)||(53863351-53863449)
chr4 (268-396)||(41083259-41083391)
chr4 (268-398)||(45038381-45038515)
chr4 (270-394)||(2788102-2788229)
chr4 (233-396)||(7245992-7246159)
chr4 (222-325)||(12592193-12592297)
chr4 (268-398)||(7246229-7246363)
chr4 (213-305)||(53863528-53863622)
chr4 (272-365)||(44057273-44057367)
chr4 (213-278)||(7245994-7246059)
chr4 (213-305)||(7246026-7246119)
chr4 (213-305)||(12498830-12498923)
chr4 (213-278)||(12498890-12498955)
chr4 (213-278)||(17231990-17232055)
chr4 (213-335)||(41083264-41083388)
chr4 (268-362)||(2787923-2788017)
chr4 (312-396)||(12498871-12498957)
chr4 (307-396)||(11884615-11884707)
chr4 (234-303)||(46196349-46196419)
chr4 (275-396)||(2470121-2470245)
chr4 (213-278)||(9999291-9999356)
chr4 (213-305)||(40146986-40147078)
chr4 (213-340)||(40147172-40147301)
chr4 (343-396)||(50290183-50290236)
chr4 (213-305)||(53863351-53863444)
chr4 (213-325)||(12498632-12498747)
chr4 (213-335)||(12592400-12592524)
chr4 (307-396)||(21322016-21322107)
chr4 (330-394)||(24684257-24684321)
chr4 (219-328)||(2470124-2470235)
chr4 (281-396)||(9999289-9999407)
chr4 (252-306)||(11884649-11884704)
chr4 (280-396)||(24684266-24684382)
chr4 (213-278)||(11884617-11884683)
chr4 (330-393)||(12498683-12498748)
chr4 (213-271)||(40395309-40395367)
chr4 (228-278)||(41083339-41083389)
chr4 (307-390)||(45038252-45038337)
chr4 (213-267)||(51950543-51950597)
chr4 (213-278)||(2469901-2469966)
chr4 (213-278)||(2788164-2788229)
chr4 (213-278)||(7246294-7246359)
chr4 (281-365)||(12498653-12498738)
chr4 (213-278)||(21322040-21322105)
chr4 (213-278)||(24369274-24369339)
chr4 (330-396)||(26782502-26782570)
chr4 (330-396)||(40395159-40395227)
chr4 (213-278)||(40395161-40395226)
chr4 (213-278)||(41083056-41083121)
chr4 (213-305)||(9999500-9999591)
chr4 (213-277)||(25055884-25055948)
chr4 (258-340)||(25056151-25056235)
chr4 (320-393)||(25056155-25056230)
chr4 (269-396)||(45787023-45787154)
chr4 (320-393)||(50290397-50290472)
[»] scaffold0279 (2 HSPs)
scaffold0279 (213-340)||(1145-1274)
scaffold0279 (268-396)||(1140-1272)
[»] scaffold0018 (6 HSPs)
scaffold0018 (268-396)||(161404-161536)
scaffold0018 (213-278)||(161675-161740)
scaffold0018 (213-335)||(161407-161531)
scaffold0018 (213-278)||(161406-161471)
scaffold0018 (213-305)||(161615-161708)
scaffold0018 (268-396)||(161610-161742)
[»] scaffold0157 (6 HSPs)
scaffold0157 (213-278)||(21522-21587)
scaffold0157 (213-305)||(21554-21647)
scaffold0157 (312-396)||(21520-21606)
scaffold0157 (213-325)||(21730-21845)
scaffold0157 (330-393)||(21729-21794)
scaffold0157 (281-365)||(21739-21824)
[»] scaffold0578 (2 HSPs)
scaffold0578 (310-394)||(2430-2517)
scaffold0578 (249-335)||(2427-2516)


Alignment Details
Target: chr5 (Bit Score: 364; Significance: 0; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 1 - 412
Target Start/End: Original strand, 1649129 - 1649540
Alignment:
Q  1 tgatattttatactagtatcattatacattagttttattaattttcatgactccaaagatatgtccaatcttggagtttgtatctcagaaactcctttat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1649129 tgatattttatactagtatcattatacattagttttattgattttcatgactccaaagatatgtccaatcttggagtttgtatctcagaaactcctttat 1649228  T
Q  101 tgtatgtgcaaattgaaggcttatgtatgagattgaacatttgctacaaaatgaattgagactttcttaaaaactgtatgcgaagatttgatagtgaaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1649229 tgtatgtgcaaattgaaggcttatgtatgagattgaacatttgctacaaaatgaattgagactttcttaaaaactgtatgcgatgatttgatagtgaaat 1649328  T
Q  201 gtttaggctaaattaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataac 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||| |    
T  1649329 gtttaggctaaattaaaggacttatgagtgatcaaaataacttaatggatcaatctgttacaaacctcaaacttaaagacttatgtctgaccaaaatagc 1649428  T
Q  301 ttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaaggatcct 400  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1649429 ttaaaaaccaatatgttataaacctcaagctttaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaaggatctt 1649528  T
Q  401 tagtataatcta 412  Q
    |||| |||||||    
T  1649529 tagtgtaatcta 1649540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 396
Target Start/End: Complemental strand, 25456399 - 25456276
Alignment:
Q  275 aaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa-aatcaatat 372  Q
    |||| ||||| | |||| |||||||||||||  |||||||||||| |||||| || |||||| ||||| |||||||||||||||||||||  | ||||||    
T  25456399 aaagacttatttgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatgtgtgatcaaaataacttaaggaccaatat 25456300  T
Q  373 gttacaaaccttaaacttaaagga 396  Q
    ||||||||||| ||||||||||||    
T  25456299 gttacaaacctaaaacttaaagga 25456276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 25456500 - 25456608
Alignment:
Q  228 gtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtctt-atgtctgactaaaataacttaaaaaccaatctgttataaacctt 326  Q
    |||| ||||||||||||| |||  ||||| |||||||| ||||||||||||| || |||| |||||||||||||||||| |||||||||||| ||||||     
T  25456500 gtgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaagtatttatgtgtgactaaaataacttaaagaccaatctgttacaaacctc 25456599  T
Q  327 aagcttaaa 335  Q
    || ||||||    
T  25456600 aaacttaaa 25456608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 399
Target Start/End: Original strand, 35813517 - 35813638
Alignment:
Q  280 cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgttac 377  Q
    ||||||| |||  |||||||||||||||| ||||||||| |||||| |  |||||| ||||| ||||| | |||||||||||||  ||  ||| ||||||    
T  35813517 cttatgtatgagcaaaataacttaaaaacaaatctgttacaaacctcacacttaaaggacttatgtgtaaccaaaataacttaaataactaatctgttac 35813616  T
Q  378 aaaccttaaacttaaaggatcc 399  Q
    |||||||||||||||| |||||    
T  35813617 aaaccttaaacttaaatgatcc 35813638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 35461563 - 35461470
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactta-aagtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||  ||||||||||||| |||| |||  |||||||||||||||||||||||| | | ||||||| |||| |||||||||||||    
T  35461563 ttaaaggacttatttgtgatcaaaataatttaaaggaccaatctgttacaaacttcaaacttacaggacttatgtgtgaccaaaataacttaaa 35461470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 396
Target Start/End: Original strand, 17400793 - 17400884
Alignment:
Q  307 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||||||||| ||| || || |||||| ||||| ||||||||||||||||||||||  | |||||||||||||| || ||||||||||||    
T  17400793 accaatctgttacaaaactcaaacttaaaggacttatgtgtgatcaaaataacttaaatgaccaatatgttacaaatctcaaacttaaagga 17400884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 393
Target Start/End: Original strand, 4943118 - 4943235
Alignment:
Q  280 cttatgtctgactaaaataacttaaaa--accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtt 375  Q
    ||||||| |||| ||||||||||||||  | ||||||||||||||  | || |||||| ||||| |||||||||||||||| |||||  | |||||||||    
T  4943118 cttatgtgtgaccaaaataacttaaaaggatcaatctgttataaatttcaaacttaaaggacttatgtgtgatcaaaataatttaaagtaccaatatgtt 4943217  T
Q  376 acaaaccttaaacttaaa 393  Q
    ||||| || |||||||||    
T  4943218 acaaatctcaaacttaaa 4943235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 25456402 - 25456279
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaa 311  Q
    ||||| |||||||  |||| ||||||||||||| |||  |||||||||||||| ||||||||||| | ||||||| |||  ||||||||||||  |||||    
T  25456402 ttaaaagacttatttgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatgtgtgatcaaaataacttaaggaccaa 25456303  T
Q  312 tctgttataaaccttaagcttaaa 335  Q
    | ||||| |||||| || ||||||    
T  25456302 tatgttacaaacctaaaacttaaa 25456279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 357
Target Start/End: Original strand, 28559454 - 28559532
Alignment:
Q  280 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaata 357  Q
    ||||||| |||||||||||| |||||  ||||||||||||||||||| || |||||| ||||||||||||| |||||||    
T  28559454 cttatgtgtgactaaaataatttaaaggaccaatctgttataaacctcaaacttaaaggacttgtgtgtgaccaaaata 28559532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 16327225 - 16327132
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| || | |||||||||||||  ||  |||||||||||||| ||||||||||| | |||||||  |||||||||||||||||    
T  16327225 ttaaaggacttatgtgttaccaaaataacttaaacgaccaatctgttacaaacctcaaacttaaaggacttatgtgcgactaaaataacttaaa 16327132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 399
Target Start/End: Original strand, 4943112 - 4943302
Alignment:
Q  215 aaaggacttatgagtgatcaaaataacttaat-ggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaa 311  Q
    |||| ||||||| |||| |||||||||||||  |||| ||||||||| ||| |||||||||||| | ||||||| |||  ||||||| |||||  |||||    
T  4943112 aaagaacttatgtgtgaccaaaataacttaaaaggatcaatctgttataaatttcaaacttaaaggacttatgtgtgatcaaaataatttaaagtaccaa 4943211  T
Q  312 tctgttataaaccttaagcttaaatg-acttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatcc 399  Q
    | ||||| ||| || || |||||| | |||| ||||||| ||||||||||||||  | |||| | | |||||||| ||| |||||||||||    
T  4943212 tatgttacaaatctcaaacttaaaagaacttatgtgtgaccaaaataacttaaatgaccaatctatcacaaacctcaaatttaaaggatcc 4943302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 37032931 - 37033046
Alignment:
Q  294 aaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaa 393  Q
    ||||||||||||||||||| |||||||||  | || ||| || ||||| ||||||| |||||||||||||||  ||| ||| | ||| || |||||||||    
T  37032931 aaataacttaaaaaccaatatgttataaatatcaaacttgaaggacttatgtgtgaccaaaataacttaaaactaatctgtcataaatctcaaacttaaa 37033030  T
Q  394 ggatccttagtataat 409  Q
     |||||  ||||||||    
T  37033031 agatcccaagtataat 37033046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 362
Target Start/End: Complemental strand, 10827217 - 10827143
Alignment:
Q  288 tgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataactta 362  Q
    |||| ||||||||||||| |||||||||||| ||| || || |||||| ||||| ||||||| ||||||||||||    
T  10827217 tgaccaaaataacttaaagaccaatctgttacaaaactcaaacttaaaagacttatgtgtgaccaaaataactta 10827143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 16327309 - 16327400
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||| ||||||  |||| ||||||||||||| |||| |||||||||||||| ||||||||||| | ||||||  || |||||||||||||||    
T  16327309 ttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaaggacttatg--tgtctaaaataacttaaa 16327400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 32361288 - 32361202
Alignment:
Q  220 acttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||  ||| ||||||||||||| ||| |||| ||||||||||||||||||||||   ||||||| |||| |||||||||||||    
T  32361288 acttatgtatgaccaaaataacttaagggactaatttgttacaaacttcaaacttaaataacttatgtgtgaccaaaataacttaaa 32361202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 6588102 - 6588147
Alignment:
Q  351 caaaataacttaaaatcaatatgttacaaaccttaaacttaaagga 396  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||    
T  6588102 caaaataacttaaaatcaatatgttacaaacctcaaatttaaagga 6588147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 16327230 - 16327098
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| | || |||||||||||||  |||||||||||| |||||| || |||||| ||||| |||| ||  |||||||||||||     
T  16327230 caaacttaaaggacttatgtgttaccaaaataacttaaacgaccaatctgttacaaacctcaaacttaaaggacttatgtgcgactaaaataacttaaac 16327131  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     |||||| | ||||||||||  |||||||||||    
T  16327130 gatcaatctattacaaacctctaacttaaagga 16327098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 17400671 - 17400579
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| | |||||||| ||||||| |||  ||| ||||||||| ||||||||| |||| ||||||| |||| |||||||||||||    
T  17400671 ttaaaggacttatgtgagatcaaaagaacttaaaggaccaatttgttacaaatttcaaacttaaaagacttatgtgtgac-aaaataacttaaa 17400579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 40980778 - 40980713
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||| ||||||| ||||||||||||||||||  ||| ||||| |||||||| ||||||||||||    
T  40980778 ttaaagtacttatgtgtgatcaaaataacttaaatgatcaatctattacaaacctcaaacttaaag 40980713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 335
Target Start/End: Complemental strand, 1996265 - 1996145
Alignment:
Q  217 aggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-accaatct 314  Q
    |||||||||| |||| ||||||||||||| ||| |||||| ||||||||  |||||||||| |  |||| | |||| |||||||||||||| | ||||||    
T  1996265 aggacttatgtgtgaccaaaataacttaaaggactaatctattacaaaccccaaacttaaaggatttatatgtgaccaaaataacttaaaatatcaatct 1996166  T
Q  315 gttataaaccttaagcttaaa 335  Q
    |||| ||| || || ||||||    
T  1996165 gttacaaatctcaaacttaaa 1996145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 28559362 - 28559302
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaact 273  Q
    |||||||||||||| |||| ||||||||||||| |||  |||||||||||||| |||||||    
T  28559362 ttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaact 28559302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 396
Target Start/End: Complemental strand, 35461527 - 35461436
Alignment:
Q  307 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||||||||| |||| | || |||| | ||||| ||||||| ||||||||||||||  | |||||| |||||||||| ||||||||||||    
T  35461527 accaatctgttacaaacttcaaacttacaggacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaacttaaagga 35461436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 396
Target Start/End: Original strand, 35461662 - 35461773
Alignment:
Q  288 tgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaacctt 384  Q
    |||| |||||||||||||  | |||||||||| ||| || ||  ||||||||||| ||||||| ||||||||||||||  | |||| | ||||||||||     
T  35461662 tgacaaaaataacttaaatgatcaatctgttacaaatctcaaaattaaatgacttatgtgtgaccaaaataacttaaaggaccaatctattacaaacctc 35461761  T
Q  385 aaacttaaagga 396  Q
    ||||||||||||    
T  35461762 aaacttaaagga 35461773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 35461703 - 35461771
Alignment:
Q  210 aaattaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||| |||||||| |||| ||||||||||||| |||  ||||| |||||||| ||||||||||||    
T  35461703 aaattaaatgacttatgtgtgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaag 35461771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 338
Target Start/End: Original strand, 35813547 - 35813635
Alignment:
Q  252 aatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatga 338  Q
    |||||||||||||| ||| ||||||| | ||||||| | || ||||||||||||| ||| ||||||||| ||||||||| |||||||||    
T  35813547 aatctgttacaaacctcacacttaaaggacttatgtgtaaccaaaataacttaaataactaatctgttacaaaccttaaacttaaatga 35813635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 38680700 - 38680632
Alignment:
Q  210 aaattaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||| || ||||| |||| ||||||||||||| || | ||||| |||||||||||||||||||||    
T  38680700 aaattaaaagatttatgtgtgaccaaaataacttaaagggtcaatctattacaaacttcaaacttaaag 38680632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 5746227 - 5746129
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 364  Q
    |||||||||||  ||||||| | || |||||||||||||  ||||||||||||||||||| ||  |||||  |||| ||||||| ||||||||||||||    
T  5746227 caaacttaaaggacttatgttttaccaaaataacttaaatgaccaatctgttataaacctcaaatttaaagaacttatgtgtgaccaaaataacttaaa 5746129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 23662005 - 23661939
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| ||||||| |||||||||||||||||||| ||| |||||  | ||||||||||||    
T  23662005 cttaaaagacttatgtgtgaccaaaataacttaaaatcaatctgtcacaaatatcaaacttaaagga 23661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 23796565 - 23796631
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| ||||||| |||||||||||||||||||| ||| |||||  | ||||||||||||    
T  23796565 cttaaaagacttatgtgtgaccaaaataacttaaaatcaatctgtcacaaatatcaaacttaaagga 23796631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 17400817 - 17400882
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| ||||||||||||||||||  ||  ||| |||||||||  ||||||||||||    
T  17400817 ttaaaggacttatgtgtgatcaaaataacttaaatgaccaatatgttacaaatctcaaacttaaag 17400882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 23661946 - 23661881
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| || | |||||||||||||  ||| |||||||||||||| ||||| ||||||    
T  23661946 ttaaaggacttatgtgtaaccaaaataacttaaaagatcaatctgttacaaacgtcaaatttaaag 23661881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 23796624 - 23796689
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| || | |||||||||||||  ||| |||||||||||||| ||||| ||||||    
T  23796624 ttaaaggacttatgtgtaaccaaaataacttaaaagatcaatctgttacaaacgtcaaatttaaag 23796689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 28559367 - 28559235
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| |||| |||||||||||||  |||||||||||| |||||| || || || |||||| || || |  |||||||||||||     
T  28559367 caaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaactgaattgacttatgcgtaacaaaaataacttaaag 28559268  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     | |||| |||||||||| | ||||||||||||    
T  28559267 gaccaatctgttacaaacgtcaaacttaaagga 28559235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 36759730 - 36759665
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||||| ||||| |||||||| |||| | | | ||||||||||||| ||||||||||||    
T  36759730 ttaaaggacttataagtgaccaaaataatttaaagaacttatctgttacaaacatcaaacttaaag 36759665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 40980771 - 40980711
Alignment:
Q  338 acttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||| ||||||||||||||||||||||  |||||| | |||||||||| ||||||||||||    
T  40980771 acttatgtgtgatcaaaataacttaaatgatcaatctattacaaacctcaaacttaaagga 40980711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 396
Target Start/End: Complemental strand, 1996261 - 1996142
Alignment:
Q  280 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaat--caatatgtta 376  Q
    ||||||| |||| |||||||||||||  || ||||| ||| |||||  || |||||| || || | ||||| ||||||||||||||||  |||| |||||    
T  1996261 cttatgtgtgaccaaaataacttaaaggactaatctattacaaaccccaaacttaaaggatttatatgtgaccaaaataacttaaaatatcaatctgtta 1996162  T
Q  377 caaaccttaaacttaaagga 396  Q
    |||| || ||||||||||||    
T  1996161 caaatctcaaacttaaagga 1996142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 2377327 - 2377379
Alignment:
Q  225 tgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    |||||||| |||||||||||| | | |||||| ||||||||||||||||||||    
T  2377327 tgagtgataaaaataacttaaagaactaatcttttacaaacttcaaacttaaa 2377379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 20928086 - 20928150
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    |||||||||||||| |||| ||||||||||||| |||  ||||||||| |||| ||||| |||||    
T  20928086 ttaaaggacttatgtgtgaccaaaataacttaaaggacaaatctgttataaacctcaaagttaaa 20928150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 25456501 - 25456609
Alignment:
Q  288 tgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa-atcaatatgttacaaacctta 385  Q
    |||| |||||||||||||  |||||||| ||| |||||| || ||||||  | || |||||||  ||||||||||||| | |||| |||||||||||| |    
T  25456501 tgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaagtatttatgtgtgactaaaataacttaaagaccaatctgttacaaacctca 25456600  T
Q  386 aacttaaag 394  Q
    |||||||||    
T  25456601 aacttaaag 25456609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 37643064 - 37643096
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaa 245  Q
    |||||||||||||||||||||||||||||||||    
T  37643064 ttaaaggacttatgagtgatcaaaataacttaa 37643096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 4943171 - 4943265
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| ||||||||||||| |||| | |  ||| |||||||||  |||||||||||    ||||||| |||| |||||||||||||    
T  4943171 ttaaaggacttatgtgtgatcaaaataatttaaagtaccaatatgttacaaatctcaaacttaaaagaacttatgtgtgaccaaaataacttaaa 4943265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 14604193 - 14604102
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatg-gattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataactt 302  Q
    |||||||||||||  |||| ||||||||| |||   ||| |||||||||||||| ||||||||||| | ||||||| |||| ||||||||||    
T  14604193 ttaaaggacttatatgtgaccaaaataacataaaatgatcaatctgttacaaacctcaaacttaaaggacttatgtgtgaccaaaataactt 14604102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 35461667 - 35461770
Alignment:
Q  234 aaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagct 331  Q
    ||||||||||||  ||| |||||||||||||  ||||| ||||| | ||||||| |||| |||||||||||||  |||||||| ||| |||||| || ||    
T  35461667 aaaataacttaaatgatcaatctgttacaaatctcaaaattaaatgacttatgtgtgaccaaaataacttaaaggaccaatctattacaaacctcaaact 35461766  T
Q  332 taaa 335  Q
    ||||    
T  35461767 taaa 35461770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 35813508 - 35813575
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaatc-aatatgttacaaaccttaaacttaaagga 396  Q
    |||||||||||| ||| ||| ||||||||||||||| | ||| |||||||||||| | ||||||||||    
T  35813508 cttaaatgacttatgtatgagcaaaataacttaaaaacaaatctgttacaaacctcacacttaaagga 35813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 339
Target Start/End: Original strand, 10827315 - 10827444
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaa-aacc 309  Q
    ||||||||||| |  |||| |||||||| |||| |||| |||||||||||||  |||||||||||  | ||||||  |||| |||| ||||||||  |||    
T  10827315 ttaaaggacttgtttgtgaccaaaataatttaaaggatcaatctgttacaaaactcaaacttaaaaggacttatgagtgaccaaaacaacttaaaggacc 10827414  T
Q  310 aatctgttataaaccttaagcttaaatgac 339  Q
    ||| | ||| |||||| || ||||||||||    
T  10827415 aatttattacaaacctcaaacttaaatgac 10827444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 16327304 - 16327434
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||| ||||| | |||| |||||||||||||  | |||||||||| |||||| || |||||| ||||| |||||    |||||||||||||     
T  16327304 caaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaaggacttatgtgtct--aaaataacttaaat 16327401  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     || ||| | |||||||||| ||||||||||||    
T  16327402 gattaatctattacaaacctcaaacttaaagga 16327434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 23662001 - 23661881
Alignment:
Q  275 aaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatat 372  Q
    |||| ||||||| |||| |||||||||||||| | ||||||| | |||  | || |||||| ||||| ||||| | ||||||||||||||  |||||| |    
T  23662001 aaagacttatgtgtgaccaaaataacttaaaatc-aatctgtcacaaatatcaaacttaaaggacttatgtgtaaccaaaataacttaaaagatcaatct 23661903  T
Q  373 gttacaaaccttaaacttaaag 394  Q
    ||||||||| | ||| ||||||    
T  23661902 gttacaaacgtcaaatttaaag 23661881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 394
Target Start/End: Original strand, 23796569 - 23796689
Alignment:
Q  275 aaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatat 372  Q
    |||| ||||||| |||| |||||||||||||| | ||||||| | |||  | || |||||| ||||| ||||| | ||||||||||||||  |||||| |    
T  23796569 aaagacttatgtgtgaccaaaataacttaaaatc-aatctgtcacaaatatcaaacttaaaggacttatgtgtaaccaaaataacttaaaagatcaatct 23796667  T
Q  373 gttacaaaccttaaacttaaag 394  Q
    ||||||||| | ||| ||||||    
T  23796668 gttacaaacgtcaaatttaaag 23796689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 32361228 - 32361170
Alignment:
Q  220 acttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||| |||| |||||||||||||  ||| ||||| |||||||||||||| ||||||    
T  32361228 acttatgtgtgaccaaaataacttaaatgatcaatctattacaaacttcaaatttaaag 32361170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 1996371 - 1996428
Alignment:
Q  221 cttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||| |||||||| |||| |||  ||||| |||||||| ||||||||||||    
T  1996371 cttatgagtgaccaaaataatttaaaggaacaatctcttacaaacctcaaacttaaag 1996428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 5746222 - 5746129
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa 305  Q
    ||||||||||||||  | | |||||||||||||  ||  ||||||||| |||| ||||| ||||||  ||||||| |||| |||||||||||||    
T  5746222 ttaaaggacttatgttttaccaaaataacttaaatgaccaatctgttataaacctcaaatttaaagaacttatgtgtgaccaaaataacttaaa 5746129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 14604154 - 14604072
Alignment:
Q  309 caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaa 393  Q
    |||||||||| |||||| || |||||| ||||| ||||||| |||||||||||   |||||| | |||||||||| ||| |||||    
T  14604154 caatctgttacaaacctcaaacttaaaggacttatgtgtgaccaaaataactt--gatcaatctattacaaacctcaaatttaaa 14604072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 19550166 - 19550101
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| |||||||| || | ||||||||||||| | || ||||| |||||||| ||||||||||||    
T  19550166 ttaaaagacttatgtgtcaccaaaataacttaaagaatcaatctattacaaacctcaaacttaaag 19550101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 23662004 - 23661894
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-acca 310  Q
    ||||| |||||||| |||| |||||||||||||   || ||||||| |||||  ||||||||||| | ||||||| | || |||||||||||||| | ||    
T  23662004 ttaaaagacttatgtgtgaccaaaataacttaa--aatcaatctgtcacaaatatcaaacttaaaggacttatgtgtaaccaaaataacttaaaagatca 23661907  T
Q  311 atctgttataaac 323  Q
    |||||||| ||||    
T  23661906 atctgttacaaac 23661894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 323
Target Start/End: Original strand, 23796566 - 23796676
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-acca 310  Q
    ||||| |||||||| |||| |||||||||||||   || ||||||| |||||  ||||||||||| | ||||||| | || |||||||||||||| | ||    
T  23796566 ttaaaagacttatgtgtgaccaaaataacttaa--aatcaatctgtcacaaatatcaaacttaaaggacttatgtgtaaccaaaataacttaaaagatca 23796663  T
Q  311 atctgttataaac 323  Q
    |||||||| ||||    
T  23796664 atctgttacaaac 23796676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 25456403 - 25456335
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| | ||||| ||||||||||||||  | |||| |||||||||||| ||||||||||||    
T  25456403 cttaaaagacttatttgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagga 25456335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 28559446 - 28559511
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| ||||  ||||||| |||| |||  ||||||||| |||| ||||||||||||    
T  28559446 ttaaaggacttatgtgtgactaaaataatttaaaggaccaatctgttataaacctcaaacttaaag 28559511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 33491639 - 33491574
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||  |||||||||||||||||| ||| ||||   |||||||| | ||||||||||    
T  33491639 ttaaaggacttatctgtgatcaaaataacttaaaggactaattgattacaaaccttaaacttaaag 33491574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 35461499 - 35461438
Alignment:
Q  217 aggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||| |||| ||||||||||||| |||  ||| | |||||||| ||||||||||||    
T  35461499 aggacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaacttaaag 35461438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 36760814 - 36760878
Alignment:
Q  337 gacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatcc 399  Q
    ||||| ||||||| | ||||||||||||  ||| || |||||||||||| |||||||||||||||    
T  36760814 gacttatgtgtgaccgaaataacttaaattatctatctgttacaaacctcaaacttaaaggatcc 36760878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 12712480 - 12712424
Alignment:
Q  338 acttgtgtgtgatcaaaataactt-aaaatcaatatgttacaaaccttaaacttaaa 393  Q
    |||| ||||||||||||||||||| ||||||||| | |||||||| | |||||||||    
T  12712480 acttatgtgtgatcaaaataacttaaaaatcaatctattacaaacatcaaacttaaa 12712424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 12713106 - 12713190
Alignment:
Q  222 ttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    ||||| |||| |||||||||||||  ||| ||| ||||| |||  ||||||||||| | ||||||| |||| |||||||||||||    
T  12713106 ttatgcgtgaccaaaataacttaaaagatcaatatgttagaaatctcaaacttaaaggacttatgtgtgacaaaaataacttaaa 12713190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 12773744 - 12773688
Alignment:
Q  338 acttgtgtgtgatcaaaataactt-aaaatcaatatgttacaaaccttaaacttaaa 393  Q
    |||| ||||||||||||||||||| ||||||||| | |||||||| | |||||||||    
T  12773744 acttatgtgtgatcaaaataacttaaaaatcaatctattacaaacatcaaacttaaa 12773688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 12774370 - 12774454
Alignment:
Q  222 ttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    ||||| |||| |||||||||||||  ||| ||| ||||| |||  ||||||||||| | ||||||| |||| |||||||||||||    
T  12774370 ttatgcgtgaccaaaataacttaaaagatcaatatgttagaaatctcaaacttaaaggacttatgtgtgacaaaaataacttaaa 12774454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 16327388 - 16327432
Alignment:
Q  234 aaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||||  ||||||||| |||||||| ||||||||||||    
T  16327388 aaaataacttaaatgattaatctattacaaacctcaaacttaaag 16327432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 395
Target Start/End: Original strand, 23662109 - 23662215
Alignment:
Q  293 aaaataacttaaaa--accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaac 388  Q
    ||||||||||||||  |||||| ||||| ||| || || ||||||  |||| ||||| | ||||||||||||||  | |||| | |||||||||| ||||    
T  23662109 aaaataacttaaaagaaccaatttgttacaaatctcaaacttaaagaacttatgtgtaaccaaaataacttaaaggaccaatttattacaaacctcaaac 23662208  T
Q  389 ttaaagg 395  Q
    |||||||    
T  23662209 ttaaagg 23662215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 28559281 - 28559237
Alignment:
Q  234 aaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||| |||  |||||||||||||| ||||||||||||    
T  28559281 aaaataacttaaaggaccaatctgttacaaacgtcaaacttaaag 28559237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 396
Target Start/End: Complemental strand, 32361287 - 32361168
Alignment:
Q  280 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 376  Q
    ||||||| |||| ||||||||||||   || ||| ||||| |||| | || ||||||| |||| ||||||| ||||||||||||||  |||||| | |||    
T  32361287 cttatgtatgaccaaaataacttaagggactaatttgttacaaacttcaaacttaaataacttatgtgtgaccaaaataacttaaatgatcaatctatta 32361188  T
Q  377 caaaccttaaacttaaagga 396  Q
    ||||| | ||| ||||||||    
T  32361187 caaacttcaaatttaaagga 32361168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 35813568 - 35813632
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    |||||||||||||| || | |||||||||||||   | ||||||||||||||| | |||||||||    
T  35813568 ttaaaggacttatgtgtaaccaaaataacttaaataactaatctgttacaaaccttaaacttaaa 35813632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 280 - 396
Target Start/End: Original strand, 36217162 - 36217278
Alignment:
Q  280 cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaa 379  Q
    ||||||| |||| ||||||| ||||| | |||||||||| |||||| || |||||| ||||| ||||||| |||||||||||||||||||| ||||||||    
T  36217162 cttatgtgtgaccaaaataatttaaagatcaatctgttacaaacctcaaacttaaaagacttatgtgtgaccaaaataacttaaaatcaatttgttacaa 36217261  T
Q  380 accttaaacttaaagga 396  Q
    |||| ||||||||||||    
T  36217262 acctcaaacttaaagga 36217278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 31630192 - 31630070
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaaaaccaat 312  Q
    ||||| |||||||| |||| ||||||||||||| |||| |||||||||||||| |||||||||||| |||| || |||| ||||||| ||| |||| |||    
T  31630192 ttaaaagacttatgtgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaagacttaggtgtgaccaaaataatttataaacaaat 31630093  T
Q  313 ctgttataaaccttaagcttaaa 335  Q
    || ||| |||||| || ||||||    
T  31630092 ctattacaaacctcaaacttaaa 31630070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 280 - 396
Target Start/End: Original strand, 25895134 - 25895253
Alignment:
Q  280 cttatgtctgactaaaataacttaaaaac-caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 376  Q
    ||||||| ||||||||||||||||||    |||||||||| ||||||||| |||||| ||||| ||||||| ||||||||||||||  | |||| |||||    
T  25895134 cttatgtgtgactaaaataacttaaaggttcaatctgttacaaaccttaaacttaaaggacttttgtgtgaccaaaataacttaaaggaccaatctgtta 25895233  T
Q  377 caaaccttaaacttaaagga 396  Q
    ||||||| ||||||||||||    
T  25895234 caaacctcaaacttaaagga 25895253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 394
Target Start/End: Original strand, 31630281 - 31630409
Alignment:
Q  268 caaacttaaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--a 365  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||| |||  ||||| ||  ||||| ||||| ||||||| ||||||||||||||  |    
T  31630281 caaacttaaagacttatgtgtgaccaaaataacttaaaaaccaatctattactaacctcaaatttaaaggacttttgtgtgaccaaaataacttaaatga 31630380  T
Q  366 tcaatatgttacaaaccttaaacttaaag 394  Q
    ||||| |  || |||||| ||||||||||    
T  31630381 tcaatcttctataaacctcaaacttaaag 31630409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 44556652 - 44556528
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||| ||||||||||||| |||| |||| ||| | |||||||| ||||||||||| | ||||||| |||| |||| ||||||||  ||||    
T  44556652 ttaaaggacttatgtgtgatcaaaataagttaaaggatcaatttattacaaacctcaaacttaaaggacttatgtgtgacaaaaaaaacttaaatgacca 44556553  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    |||| ||| ||||||||| ||||||    
T  44556552 atctattacaaaccttaaacttaaa 44556528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 25895128 - 25895255
Alignment:
Q  215 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaat 312  Q
    |||||||||||| ||||  |||||||||||| || | |||||||||||||| | ||||||||| | ||| ||| |||| |||||||||||||  ||||||    
T  25895128 aaaggacttatgtgtgactaaaataacttaaaggttcaatctgttacaaaccttaaacttaaaggacttttgtgtgaccaaaataacttaaaggaccaat 25895227  T
Q  313 ctgttataaaccttaagcttaaatgact 340  Q
    |||||| |||||| || |||||| ||||    
T  25895228 ctgttacaaacctcaaacttaaaggact 25895255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 9501037 - 9500905
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| |||||||||||||||||| || | |||||||| |||||| || |||||  |||||  |||||| ||||||||||||||     
T  9501037 caaacttaaaggacttatgtgtgactaaaataacttaaagaagcgatctgttacaaacctcaaacttaagggacttaagtgtgaccaaaataacttaaag 9500938  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     | |||| ||||||| |||| ||||||||||||    
T  9500937 gaccaatctgttacagacctaaaacttaaagga 9500905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 5009379 - 5009509
Alignment:
Q  268 caaacttaaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaat 366  Q
    |||||||||||  |||||| |||| |||||||||||||  | |||| ||||| |||||| || ||||||  |||| ||||||| ||||| |||||||||     
T  5009379 caaacttaaaggattatgtgtgacaaaaataacttaaaggatcaatatgttacaaacctcaaacttaaagtacttatgtgtga-caaaaaaacttaaaag 5009477  T
Q  367 --caatatgttacaaaccttaaacttaaagga 396  Q
      ||||||||||||||||| ||||||||||||    
T  5009478 accaatatgttacaaacctcaaacttaaagga 5009509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 5009384 - 5009506
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaaa-acca 310  Q
    |||||||| ||||| ||||  |||||||||||| |||| ||| |||||||||| ||||||||||||| ||||||| |||| |||| ||||||||| ||||    
T  5009384 ttaaagga-ttatgtgtgacaaaaataacttaaaggatcaatatgttacaaacctcaaacttaaagtacttatgtgtgac-aaaaaaacttaaaagacca 5009481  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    || ||||| |||||| || ||||||    
T  5009482 atatgttacaaacctcaaacttaaa 5009506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 341
Target Start/End: Original strand, 36217155 - 36217281
Alignment:
Q  214 taaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaaaaccaat 312  Q
    |||| |||||||| |||| |||||||| |||| | || |||||||||||||| |||||||| |||| ||||||| |||| |||||||||| |||| ||||    
T  36217155 taaatgacttatgtgtgaccaaaataatttaaag-atcaatctgttacaaacctcaaacttaaaagacttatgtgtgaccaaaataactt-aaaatcaat 36217252  T
Q  313 ctgttataaaccttaagcttaaatgactt 341  Q
     ||||| |||||| || |||||| |||||    
T  36217253 ttgttacaaacctcaaacttaaaggactt 36217281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 43699448 - 43699529
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatccttagtataat 409  Q
    |||||| ||||| ||||||| |||||||| |||||  ||||||||||||||||||| |||||||||||| || | |||||||    
T  43699448 cttaaaagacttatgtgtgaccaaaataaattaaaggatcaatatgttacaaacctcaaacttaaaggacccattgtataat 43699529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 4188689 - 4188624
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||| || |||| ||||||||||||||||| | || |||||||||||||||| ||||||    
T  4188689 ttaaaggacttgtgtgtgaccaaaataacttaatggagttatttgttacaaacttcaaagttaaag 4188624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 25895186 - 25895251
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||| || |||| ||||||||||||| |||  |||||||||||||| ||||||||||||    
T  25895186 ttaaaggacttttgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaag 25895251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 33847703 - 33847768
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| ||||||||||||| |||  ||| |||||||||| ||||||||||||    
T  33847703 ttaaaggacttatgtgtgaccaaaataacttaaaggaacaatatgttacaaacatcaaacttaaag 33847768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 335
Target Start/End: Complemental strand, 5009289 - 5009161
Alignment:
Q  214 taaaggacttatgagtgatcaaaataacttaatgga----ttaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-- 306  Q
    |||| |||||||| ||||||||||||||||||  ||    ||||||||||||||||  |||||||||| | ||||||| |||  ||||||||||||||      
T  5009289 taaaagacttatgtgtgatcaaaataacttaaatgacaaattaatctgttacaaaccacaaacttaaatgacttatgtgtgaacaaaataacttaaaagg 5009190  T
Q  307 accaatctgttataaaccttaagcttaaa 335  Q
    |||||||| ||| |||||| || ||||||    
T  5009189 accaatctattacaaacctcaaacttaaa 5009161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 12612514 - 12612448
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaag 394  Q
    |||||||||||| |||||||||||||||| |||||  | |||| | |||||||||||||||||||||    
T  12612514 cttaaatgacttatgtgtgatcaaaataatttaaaagaccaatctattacaaaccttaaacttaaag 12612448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 31630193 - 31630127
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaag 394  Q
    |||||| ||||| ||||||| ||||||||||||||  |||||| |||||||||||| ||||||||||    
T  31630193 cttaaaagacttatgtgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaag 31630127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 1316162 - 1316069
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| | |||||||||||||||| | |   || |||||||||| |||||| |||| | ||||||| |||| |||||||||||||    
T  1316162 ttaaaggacttatgtgcgatcaaaataacttaaagaacatatatgttacaaacctcaaacataaaggacttatgtgtgaccaaaataacttaaa 1316069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 4511638 - 4511683
Alignment:
Q  233 caaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||||| | || |||||||||||||||||||||||||||    
T  4511638 caaaataacttaaagaatcaatctgttacaaacttcaaacttaaag 4511683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 394
Target Start/End: Complemental strand, 5009247 - 5009160
Alignment:
Q  310 aatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa---atcaatatgttacaaaccttaaacttaaag 394  Q
    ||||||||| |||||  || |||||||||||| ||||||| ||||||||||||||   | |||| | |||||||||| ||||||||||    
T  5009247 aatctgttacaaaccacaaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaag 5009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 29379903 - 29379968
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||| ||||||| |||| |||||||| |||| ||| |||| |||||||||| ||||||||||||    
T  29379903 ttaaagaacttatgtgtgaccaaaataatttaaaggactaatatgttacaaacgtcaaacttaaag 29379968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 36694524 - 36694589
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| |||||||| |||| |||  |||||||||||||| ||||| ||||||    
T  36694524 ttaaaggacttatgtgtgaccaaaataatttaaaggaccaatctgttacaaacctcaaaattaaag 36694589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 43699449 - 43699514
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| |||||||| |||| |||||||| |||| |||| ||| |||||||||| ||||||||||||    
T  43699449 ttaaaagacttatgtgtgaccaaaataaattaaaggatcaatatgttacaaacctcaaacttaaag 43699514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 44556653 - 44556585
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| |||||||||||||||| |||||  |||||| | |||||||||| ||||||||||||    
T  44556653 cttaaaggacttatgtgtgatcaaaataagttaaaggatcaatttattacaaacctcaaacttaaagga 44556585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 9501032 - 9500908
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaa-agtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||| ||||  |||||||||||| | |   ||||||||||||| ||||||||||  | |||| || |||| |||||||||||||  ||||    
T  9501032 ttaaaggacttatgtgtgactaaaataacttaaagaagcgatctgttacaaacctcaaacttaagggacttaagtgtgaccaaaataacttaaaggacca 9500933  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    |||||||| | |||| || ||||||    
T  9500932 atctgttacagacctaaaacttaaa 9500908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 396
Target Start/End: Original strand, 33847703 - 33847770
Alignment:
Q  331 ttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    ||||| ||||| ||||||| ||||||||||||||  | ||||||||||||||| | ||||||||||||    
T  33847703 ttaaaggacttatgtgtgaccaaaataacttaaaggaacaatatgttacaaacatcaaacttaaagga 33847770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 400
Target Start/End: Complemental strand, 1316141 - 1316031
Alignment:
Q  293 aaaataacttaaaaacca-atctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 389  Q
    ||||||||||||| | || || ||||| |||||| || | |||| ||||| ||||||| ||||||||||||||  ||| || | |||||||||| ||| |    
T  1316141 aaaataacttaaagaacatatatgttacaaacctcaaacataaaggacttatgtgtgaccaaaataacttaaacgatctatctattacaaacctcaaatt 1316042  T
Q  390 taaaggatcct 400  Q
    |||||||||||    
T  1316041 taaaggatcct 1316031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 396
Target Start/End: Complemental strand, 31630189 - 31630067
Alignment:
Q  275 aaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaa-tat 372  Q
    |||| ||||||| |||| |||||||||||||  | |||||||||| |||||| || |||||| |||||  |||||| |||||||| ||| || ||| | |    
T  31630189 aaagacttatgtgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaa-gacttaggtgtgaccaaaataatttataaacaaatct 31630091  T
Q  373 gttacaaaccttaaacttaaagga 396  Q
     |||||||||| ||||||||||||    
T  31630090 attacaaacctcaaacttaaagga 31630067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 396
Target Start/End: Original strand, 25895132 - 25895193
Alignment:
Q  337 gacttgtgtgtgatcaaaataacttaaaa--tcaatatgttacaaaccttaaacttaaagga 396  Q
    ||||| |||||||  |||||||||||||   ||||| |||||||||||||||||||||||||    
T  25895132 gacttatgtgtgactaaaataacttaaaggttcaatctgttacaaaccttaaacttaaagga 25895193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 323
Target Start/End: Original strand, 4511597 - 4511670
Alignment:
Q  252 aatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaa-aaccaatctgttataaac 323  Q
    ||||||||||||||| |||||||||| |  |||||||| || ||||||||||||| || |||||||||| ||||    
T  4511597 aatctgttacaaactccaaacttaaattatttatgtctaaccaaaataacttaaagaatcaatctgttacaaac 4511670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 1316101 - 1316037
Alignment:
Q  214 taaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||||| |||| |||||||||||||  |||  |||| |||||||| ||||| ||||||    
T  1316101 taaaggacttatgtgtgaccaaaataacttaaacgatctatctattacaaacctcaaatttaaag 1316037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 1316163 - 1316095
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa-atca-atatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| |||| ||||||||||||||||| | || ||||||||||||||| |||| |||||||    
T  1316163 cttaaaggacttatgtgcgatcaaaataacttaaagaacatatatgttacaaacctcaaacataaagga 1316095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 3876949 - 3877013
Alignment:
Q  214 taaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||||| |||| |||||||||||||  ||| ||| | |||||||| ||||| ||||||    
T  3876949 taaaggacttatgtgtgaccaaaataacttaaaagatcaatttattacaaacctcaaatttaaag 3877013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 277
Target Start/End: Original strand, 11791813 - 11791873
Alignment:
Q  217 aggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    |||||||||| |||| |||||||||||||  ||   |||| ||||||||||||||||||||    
T  11791813 aggacttatgtgtgaccaaaataacttaaatgacatatctattacaaacttcaaacttaaa 11791873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 30265450 - 30265382
Alignment:
Q  210 aaattaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||| ||| ||| |||| |||||||| ||||||||  ||| | |||||||| ||||||||||||    
T  30265450 aaattaaagaactgatgcgtgaccaaaataatttaatggaccaatttattacaaacctcaaacttaaag 30265382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 393
Target Start/End: Original strand, 12277 - 12377
Alignment:
Q  293 aaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaa 392  Q
    ||||||| ||||| |||||||||||| |||||| || ||||| |||||| | |||||||||||||||||||||||||| | |||||||||| ||||||||    
T  12277 aaaataagttaaagaccaatctgttacaaacctcaaacttaattgacttatatgtgatcaaaataacttaaaatcaatctattacaaacctcaaacttaa 12376  T
Q  393 a 393  Q
    |    
T  12377 a 12377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 401
Target Start/End: Complemental strand, 12180 - 12046
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaat 366  Q
    |||||||||||  ||| ||| |||| ||||||||||||  |||||| ||||| ||| || || |||||| |   | ||||||| ||||||||||| |||     
T  12180 caaacttaaaggacttgtgtgtgacaaaaataacttaaggaccaatttgttacaaatctcaaacttaaagggtatatgtgtgaccaaaataacttgaaac 12081  T
Q  367 caatatgttacaaaccttaaacttaaaggatcctt 401  Q
    |||| | |||||||||| |||||||||||| ||||    
T  12080 caatttattacaaacctcaaacttaaaggaccctt 12046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 24059797 - 24059667
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 365  Q
    |||||||||||  ||||||| |||| ||||||| |||||  | ||||||||||||||||| || |||||| ||||| |||| |  |||| ||||||||||    
T  24059797 caaacttaaaggacttatgtgtgaccaaaataatttaaatgatcaatctgttataaacctcaaacttaaaggacttatgtggggccaaagtaacttaaaa 24059698  T
Q  366 tcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||||||||||||||| ||||||||||||    
T  24059697 tcaatatgttacaaacctcaaacttaaagga 24059667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 21598572 - 21598448
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||| | |||||||||||||||| |||  |||||||||||||| ||||||||||| | |||||||   || |||||||||||||  ||||    
T  21598572 ttaaaggacttatgtgggatcaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatgtgcaaccaaaataacttaaaggacca 21598473  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    ||||||||||||||| || ||||||    
T  21598472 atctgttataaacctcaaacttaaa 21598448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 395
Target Start/End: Original strand, 35050736 - 35050917
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaaa-accaa 311  Q
    |||||| ||||||| |||||| ||||||||||| |||  |||||||||||||| | |||||||||| |    || | ||  ||||||||||||  |||||    
T  35050736 ttaaagaacttatgtgtgatcgaaataacttaaaggaccaatctgttacaaaccttaaacttaaaggc----gtgttacctaaataacttaaaggaccaa 35050831  T
Q  312 tctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagg 395  Q
    ||||||| |||| |||| |||||| ||||| || |||| | ||||||||||||  |||||| | |||||||||| |||||||||||    
T  35050832 tctgttacaaactttaaacttaaaggacttatgcgtgacctaaataacttaaaggatcaatttattacaaacctcaaacttaaagg 35050917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 17136971 - 17136878
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    ||||| |||||||| |||| ||||||||||||| | ||||||||||||||||| ||||||||||| | |||||||  ||| |||||||||||||    
T  17136971 ttaaaagacttatgtgtgaccaaaataacttaaagaattaatctgttacaaacctcaaacttaaatgacttatgtgagaccaaaataacttaaa 17136878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 409
Target Start/End: Complemental strand, 10356409 - 10356248
Alignment:
Q  252 aatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtga 349  Q
    ||||| |||||||  ||||||||||||  |||| || |||| ||||||||||||| ||||||||||||| |||  | || |||||| ||||| |||||||    
T  10356409 aatctattacaaatatcaaacttaaaggacttaagtgtgaccaaaataacttaaagaaccaatctgttacaaatatcaaacttaaaggacttatgtgtga 10356310  T
Q  350 tcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatccttagtataat 409  Q
     |||||||| |||||  |  ||| |||||||||||| |||||||||||| || |||| ||||    
T  10356309 ccaaaataatttaaaggactaatttgttacaaacctcaaacttaaaggacccctagtgtaat 10356248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 409
Target Start/End: Complemental strand, 35225502 - 35225385
Alignment:
Q  295 aataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaactta 391  Q
    |||||||||||  |||||||||||| ||||||||| |||||| || || ||| ||| ||||||||||||||  | |||| |||||||||||| |||||||    
T  35225502 aataacttaaaggaccaatctgttacaaaccttaaacttaaaggatttatgtatgaccaaaataacttaaaggaccaatttgttacaaacctcaaactta 35225403  T
Q  392 aaggatccttagtataat 409  Q
    ||||| || |||| ||||    
T  35225402 aaggacccctagtgtaat 35225385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 21598651 - 21598783
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| |||| |||||||||||||  |||||| ||||| |||||  || |||||| ||||| |||| || ||||||||||||||     
T  21598651 caaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaaccacaaacttaaaggacttatgtgagaacaaaataacttaaag 21598750  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     | |||| |||||||||||| ||||||||||||    
T  21598751 gaccaatctgttacaaacctcaaacttaaagga 21598783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 9982737 - 9982673
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    |||||||||||||| ||||||||||||| |||| |||| ||| |||||||||| |||||||||||    
T  9982737 ttaaaggacttatgtgtgatcaaaataatttaaaggatgaatatgttacaaacctcaaacttaaa 9982673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 21598656 - 21598780
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||| |||| ||||||||||||| |||  ||| ||||||||||  |||||||||| | |||||||  ||  |||||||||||||  ||||    
T  21598656 ttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaaccacaaacttaaaggacttatgtgagaacaaaataacttaaaggacca 21598755  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    |||||||| |||||| || ||||||    
T  21598756 atctgttacaaacctcaaacttaaa 21598780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 35225525 - 35225401
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||| ||||||| ||||||| |||||||||| |||  |||||||||||||| | ||||||||| |  |||||| |||| |||||||||||||  ||||    
T  35225525 ttaaagaacttatgtgtgatcagaataacttaaaggaccaatctgttacaaaccttaaacttaaaggatttatgtatgaccaaaataacttaaaggacca 35225426  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    || ||||| |||||| || ||||||    
T  35225425 atttgttacaaacctcaaacttaaa 35225401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 9982759 - 9982673
Alignment:
Q  309 caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 393  Q
    |||||||||| ||| || || |||||| ||||| |||||||||||||||| |||||  || |||||||||||||||| |||||||||    
T  9982759 caatctgttacaaaactcaaacttaaaggacttatgtgtgatcaaaataatttaaaggatgaatatgttacaaacctcaaacttaaa 9982673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 402
Target Start/End: Original strand, 9982875 - 9983013
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  |||||||  ||| |||| ||||||||  |||||| ||||| ||||  ||| |||||| ||||| ||||||| ||||||||||||||     
T  9982875 caaacttaaaggacttatgtgagacaaaaagaacttaaaggaccaatatgttacaaactctaaacttaaaggacttatgtgtgaccaaaataacttaaag 9982974  T
Q  365 -atcaatatgttacaaaccttaaacttaaaggatcctta 402  Q
     |||||| |||||||| ||| |||||||||||| |||||    
T  9982975 gatcaatttgttacaatcctcaaacttaaaggaccctta 9983013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 395
Target Start/End: Original strand, 35050712 - 35050802
Alignment:
Q  307 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagg 395  Q
    |||||||||||| ||| || || ||||||  |||| ||||||||| ||||||||||||  | |||| ||||||||||||||||||||||||    
T  35050712 accaatctgttacaaatctcaaacttaaagaacttatgtgtgatcgaaataacttaaaggaccaatctgttacaaaccttaaacttaaagg 35050802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 364
Target Start/End: Complemental strand, 17136968 - 17136878
Alignment:
Q  275 aaagtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 364  Q
    |||| ||||||| |||| ||||||||||||| ||  ||||||||| |||||| || |||||||||||| |||| || ||||||||||||||    
T  17136968 aaagacttatgtgtgaccaaaataacttaaagaattaatctgttacaaacctcaaacttaaatgacttatgtgagaccaaaataacttaaa 17136878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 9982940 - 9983005
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| ||||||||||||| |||| ||| |||||||| | ||||||||||||    
T  9982940 ttaaaggacttatgtgtgaccaaaataacttaaaggatcaatttgttacaatcctcaaacttaaag 9983005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 10356328 - 10356263
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| |||||||| |||| ||| |||| |||||||||| ||||||||||||    
T  10356328 ttaaaggacttatgtgtgaccaaaataatttaaaggactaatttgttacaaacctcaaacttaaag 10356263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 10356467 - 10356599
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| || | |||||||||||||| |||||||||||| ||| || || |||||| ||||| ||||| | ||||||||| ||||     
T  10356467 caaacttaaaggacttatgtgtggcaaaaataacttaaaagaccaatctgttacaaatctcaaacttaaaggacttatgtgttaccaaaataacctaaag 10356566  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     | |||| |||||||||| | ||||||||||||    
T  10356567 gaccaatctgttacaaacgtcaaacttaaagga 10356599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 21598716 - 21598781
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| | || ||||||||||||| |||  |||||||||||||| ||||||||||||    
T  21598716 ttaaaggacttatgtgagaacaaaataacttaaaggaccaatctgttacaaacctcaaacttaaag 21598781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 409
Target Start/End: Complemental strand, 21598551 - 21598432
Alignment:
Q  293 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 389  Q
    |||||||||||||  |||||||||||| |||||| || |||||| ||||| ||||  | ||||||||||||||  | |||| ||||| |||||| |||||    
T  21598551 aaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatgtgcaaccaaaataacttaaaggaccaatctgttataaacctcaaact 21598452  T
Q  390 taaaggatccttagtataat 409  Q
    ||||||| ||| ||| ||||    
T  21598451 taaaggaccctgagtgtaat 21598432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 399
Target Start/End: Complemental strand, 364117 - 363984
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa-- 364  Q
    |||||||||||  ||||| | |||| |||| |||||||||| |||||||||| ||||||||| |||||| ||||| ||| | | |||||||| |||||      
T  364117 caaacttaaagaacttatttgtgaccaaaacaacttaaaaatcaatctgttacaaaccttaaacttaaaggacttctgtttaaccaaaataatttaaaga 364018  T
Q  365 atcaatatgttacaaaccttaaacttaaaggatcc 399  Q
    |||| | | |||||||| | |||||||||||||||    
T  364017 atca-tctattacaaacttaaaacttaaaggatcc 363984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 35225518 - 35225457
Alignment:
Q  338 acttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggat 397  Q
    |||| |||||||||| |||||||||||  | |||| ||||||||||||||||||||||||||    
T  35225518 acttatgtgtgatcagaataacttaaaggaccaatctgttacaaaccttaaacttaaaggat 35225457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 10356388 - 10356295
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||| | |||| ||||||||||||| | |  |||||||||||||  ||||||||||| | ||||||| |||| ||||||| |||||    
T  10356388 ttaaaggacttaagtgtgaccaaaataacttaaagaaccaatctgttacaaatatcaaacttaaaggacttatgtgtgaccaaaataatttaaa 10356295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 10356532 - 10356597
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| || | ||||||||| ||| |||  |||||||||||||| ||||||||||||    
T  10356532 ttaaaggacttatgtgttaccaaaataacctaaaggaccaatctgttacaaacgtcaaacttaaag 10356597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 17342651 - 17342744
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| |||| | ||||||||||| |||  ||  |||||||||| |||||||| |||| ||||||| | || |||||||||||||    
T  17342651 ttaaaggacttatgtgtgaccgaaataacttaaaggaccaacatgttacaaacctcaaacttaaaagacttatgtattaccaaaataacttaaa 17342744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 21598573 - 21598505
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| |||| |||||||||||||||||  | |||| |||||||||||| ||||||||||||    
T  21598573 cttaaaggacttatgtgggatcaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagga 21598505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 24059792 - 24059727
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| |||||||| ||||  ||| ||||||||| |||| ||||||||||||    
T  24059792 ttaaaggacttatgtgtgaccaaaataatttaaatgatcaatctgttataaacctcaaacttaaag 24059727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 394
Target Start/End: Original strand, 17342646 - 17342776
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| ||||  ||||||||||||  |||||  ||||| |||||| || |||||| ||||| ||| | | ||||||||||||||     
T  17342646 caaacttaaaggacttatgtgtgaccgaaataacttaaaggaccaacatgttacaaacctcaaacttaaaagacttatgtattaccaaaataacttaaag 17342745  T
Q  365 -atcaatatgttacaaaccttaaacttaaag 394  Q
     | ||| ||||||||||||| ||||||||||    
T  17342746 gaccaacatgttacaaacctcaaacttaaag 17342776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 17136972 - 17136907
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgttacaaaccttaaacttaaa 393  Q
    |||||| ||||| ||||||| |||||||||||||  ||| ||| |||||||||||| |||||||||    
T  17136972 cttaaaagacttatgtgtgaccaaaataacttaaagaattaatctgttacaaacctcaaacttaaa 17136907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 9982797 - 9982732
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| |||||||| | || |||||||||| || |||| |||||||||||||  ||||||||||||    
T  9982797 ttaaaagacttatgtgcgaccaaaataactcaaaggatcaatctgttacaaaactcaaacttaaag 9982732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 9982880 - 9982973
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| | ||  |||| ||||||| |||  ||| |||||||||||  ||||||||| | ||||||| |||| |||||||||||||    
T  9982880 ttaaaggacttatgtgagacaaaaagaacttaaaggaccaatatgttacaaactctaaacttaaaggacttatgtgtgaccaaaataacttaaa 9982973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 17136911 - 17136846
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| |||||||| | || ||||||||||||| ||| |||||| |||||||| ||||| ||||||    
T  17136911 ttaaatgacttatgtgagaccaaaataacttaaaggactaatctattacaaacctcaaatttaaag 17136846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 21598512 - 21598447
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |  | ||||||||||||| |||  ||||||||| |||| ||||||||||||    
T  21598512 ttaaaggacttatgtgcaaccaaaataacttaaaggaccaatctgttataaacctcaaacttaaag 21598447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 35050663 - 35050598
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| || ||||| ||||  |||||||||||| ||| |||||| |||| ||||||||||||||||    
T  35050663 ttaaaagatttatgtgtgacaaaaataacttaaaggactaatctcttacgaacttcaaacttaaag 35050598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 35050715 - 35050800
Alignment:
Q  252 aatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaa 335  Q
    |||||||||||||  ||||||||||||  ||||||| |||   ||||||||||||  |||||||||||| ||||||||| ||||||    
T  35050715 aatctgttacaaatctcaaacttaaagaacttatgtgtgatcgaaataacttaaaggaccaatctgttacaaaccttaaacttaaa 35050800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 35225465 - 35225400
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||| |||||  ||| ||||||||||||| |||  ||| |||||||||| ||||||||||||    
T  35225465 ttaaaggatttatgtatgaccaaaataacttaaaggaccaatttgttacaaacctcaaacttaaag 35225400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 366
Target Start/End: Complemental strand, 2761529 - 2761493
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaat 366  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  2761529 cttaaaggacttatgtgtgatcaaaataacttaaaat 2761493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 2761528 - 2761496
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaa 245  Q
    |||||||||||||| ||||||||||||||||||    
T  2761528 ttaaaggacttatgtgtgatcaaaataacttaa 2761496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 323
Target Start/End: Original strand, 10356472 - 10356584
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||| |||   ||||||||||||  ||  |||||||||||||  ||||||||||| | ||||||| | || |||||||| ||||  ||||    
T  10356472 ttaaaggacttatgtgtggcaaaaataacttaaaagaccaatctgttacaaatctcaaacttaaaggacttatgtgttaccaaaataacctaaaggacca 10356571  T
Q  311 atctgttataaac 323  Q
    |||||||| ||||    
T  10356572 atctgttacaaac 10356584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 7e-22; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 275 - 396
Target Start/End: Original strand, 18020035 - 18020159
Alignment:
Q  275 aaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaata 371  Q
    |||| ||||||| | || |||||||||||||  |||||||||||||||||||||| |||||| ||||| ||| ||| |||||||||||||  |||||||     
T  18020035 aaagacttatgtgtaaccaaaataacttaaacgaccaatctgttataaaccttaaacttaaaggacttatgtttgaccaaaataacttaaataatcaatc 18020134  T
Q  372 tgttacaaaccttaaacttaaagga 396  Q
    | |||||||||| ||||||||||||    
T  18020135 tattacaaacctcaaacttaaagga 18020159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 213 - 339
Target Start/End: Complemental strand, 46337629 - 46337501
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||| ||||  |||| ||||||||||||| | |||||| |||||||||||||||||||||| | ||||||| |||| ||||||| ||||| || ||    
T  46337629 ttaaaggatttatctgtgaccaaaataacttaaagaattaatatgttacaaacttcaaacttaaaggacttatgtgtgaccaaaataatttaaagaatca 46337530  T
Q  311 atctgttataaaccttaagcttaaatgac 339  Q
    || ||||| |||||| || ||||||||||    
T  46337529 atatgttacaaacctcaaacttaaatgac 46337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 396
Target Start/End: Complemental strand, 47069647 - 47069528
Alignment:
Q  280 cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 376  Q
    ||||||| |||| ||||||||| ||| ||||||| ||||| ||| || || ||||||  |||| ||||||||||||||||||||||  | ||||||||||    
T  47069647 cttatgtgtgaccaaaataactaaaagaaccaatttgttacaaaactcaaacttaaagaacttatgtgtgatcaaaataacttaaaggaccaatatgtta 47069548  T
Q  377 caaaccttaaacttaaagga 396  Q
    ||||||| ||| ||||||||    
T  47069547 caaacctcaaatttaaagga 47069528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 47891392 - 47891455
Alignment:
Q  215 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||||||||||||    
T  47891392 aaaggacttatgtgtgatcaaaataacttaaaggatcaatttgttacaaatttcaaacttaaag 47891455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 365
Target Start/End: Original strand, 25848508 - 25848662
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-acca 310  Q
    ||||||||| |||| |||| ||||||||||||| |||  ||| |||||||||| | ||| ||||| | ||||||| ||| ||||||||||||||| | ||    
T  25848508 ttaaaggacatatgtgtgaccaaaataacttaaaggaccaatgtgttacaaacctaaaatttaaaggacttatgtgtgattaaaataacttaaaagatca 25848607  T
Q  311 atctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 365  Q
    || | ||| |||||| || ||| || ||||| ||||| | |||||||||||||||    
T  25848608 atttattacaaacctcaaactttaaggacttatgtgttaccaaaataacttaaaa 25848662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 401
Target Start/End: Original strand, 47891333 - 47891462
Alignment:
Q  275 aaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaata 371  Q
    |||| ||||||| |||| |||||||||||||  |||||| ||||  |||||| || || ||| ||||| ||||||||||||||||||||||  ||||||     
T  47891333 aaagacttatgtgtgaccaaaataacttaaaggaccaatatgttgcaaacctcaaactcaaaggacttatgtgtgatcaaaataacttaaaggatcaatt 47891432  T
Q  372 tgttacaaaccttaaacttaaaggatcctt 401  Q
    |||||||||  | |||||||||||| ||||    
T  47891433 tgttacaaatttcaaacttaaaggaccctt 47891462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 409
Target Start/End: Original strand, 40286473 - 40286597
Alignment:
Q  288 tgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaacctt 384  Q
    |||||||||||||| |||| |||||||||||| |||||| || |||||| ||||| |||| ||| |||||||||||||  |||||   |||||||||||     
T  40286473 tgactaaaataactcaaaagaccaatctgttacaaacctcaaacttaaaggacttatgtgcgataaaaataacttaaaggatcaaacggttacaaacctc 40286572  T
Q  385 aaacttaaaggatccttagtataat 409  Q
    ||| |||||||| || | |||||||    
T  40286573 aaatttaaaggacccctggtataat 40286597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 252173 - 252049
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||  |||| |||||||||||||  || | ||||||||||||| | ||||||||| | |||| || |||| |||||||||||||  ||||    
T  252173 ttaaaggacttatttgtgaccaaaataacttaaaagactgatctgttacaaaccttaaacttaaaggacttacgtgtgaccaaaataacttaaatgacca 252074  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    |||| |||||||||| || ||||||    
T  252073 atctattataaacctcaaacttaaa 252049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 25848375 - 25848285
Alignment:
Q  310 aatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatc 398  Q
    ||||| ||| |||||| || |||||| ||||||||||||| ||||||||||||||  |||||| | ||||||| || ||||||||||||||    
T  25848375 aatctattacaaacctcaaacttaaaggacttgtgtgtgaccaaaataacttaaaggatcaatttattacaaatctcaaacttaaaggatc 25848285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 396
Target Start/End: Original strand, 25848518 - 25848635
Alignment:
Q  282 tatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttaca 378  Q
    ||||| |||| |||||||||||||  |||||| ||||| |||||| ||  ||||| ||||| |||||||| |||||||||||||  |||||| | |||||    
T  25848518 tatgtgtgaccaaaataacttaaaggaccaatgtgttacaaacctaaaatttaaaggacttatgtgtgattaaaataacttaaaagatcaatttattaca 25848617  T
Q  379 aaccttaaacttaaagga 396  Q
    ||||| |||||| |||||    
T  25848618 aacctcaaactttaagga 25848635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 25848568 - 25848693
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaac-ttaaagtcttatgtctgactaaaataacttaaaa--acc 309  Q
    |||||||||||||| ||||| ||||||||||||  ||| ||| | |||||||| |||||| |||| | ||||||| | || ||||||||||||||  |||    
T  25848568 ttaaaggacttatgtgtgattaaaataacttaaaagatcaatttattacaaacctcaaactttaaggacttatgtgttaccaaaataacttaaaaggacc 25848667  T
Q  310 aatctgttataaaccttaagcttaaa 335  Q
    ||| | |||||||||| || ||||||    
T  25848668 aatttattataaacctcaaacttaaa 25848693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 274
Target Start/End: Complemental strand, 40286305 - 40286244
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt 274  Q
    |||||||||||||| |||||||||||||||| | ||| |||| |||||||||| ||||||||    
T  40286305 ttaaaggacttatgtgtgatcaaaataacttgaaggactaatttgttacaaacatcaaactt 40286244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 46337613 - 46337505
Alignment:
Q  288 tgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaacctt 384  Q
    |||| ||||||||||||| ||  ||| ||||| |||| | || |||||| ||||| ||||||| |||||||| |||||  |||||||||||||||||||     
T  46337613 tgaccaaaataacttaaagaattaatatgttacaaacttcaaacttaaaggacttatgtgtgaccaaaataatttaaagaatcaatatgttacaaacctc 46337514  T
Q  385 aaacttaaa 393  Q
    |||||||||    
T  46337513 aaacttaaa 46337505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 398
Target Start/End: Original strand, 40209880 - 40210010
Alignment:
Q  268 caaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa-a 365  Q
    |||||||||| | ||||||| |||| |||||| ||||||| ||||||||||  | |||| || |||||| || || ||||||| |||||||| ||||| |    
T  40209880 caaacttaaacgacttatgtgtgaccaaaatatcttaaaa-ccaatctgttcgagacctcaaacttaaa-gaattatgtgtgaccaaaataaattaaaga 40209977  T
Q  366 tcaatatgttacaaaccttaaacttaaaggatc 398  Q
    ||||||||||| ||| || ||||||||||||||    
T  40209978 tcaatatgttagaaatctcaaacttaaaggatc 40210010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 394
Target Start/End: Complemental strand, 252178 - 252048
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||| | |||| |||||||||||||| ||  |||||||| ||||||||| |||||| |||||  |||||| ||||||||||||||     
T  252178 caaacttaaaggacttatttgtgaccaaaataacttaaaagactgatctgttacaaaccttaaacttaaaggacttacgtgtgaccaaaataacttaaat 252079  T
Q  365 -atcaatatgttacaaaccttaaacttaaag 394  Q
     | |||| | ||| |||||| ||||||||||    
T  252078 gaccaatctattataaacctcaaacttaaag 252048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 396
Target Start/End: Original strand, 26724238 - 26724347
Alignment:
Q  288 tgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgttacaaacctta 385  Q
    |||| |||||||||||||| | ||||||||| | |||| ||  ||||| ||||| |||||||  ||||||||||||  ||||||| | |||||||||| |    
T  26724238 tgaccaaaataacttaaaa-ctaatctgttagagacctcaaatttaaaggacttatgtgtgacgaaaataacttaaagaatcaatctattacaaacctca 26724336  T
Q  386 aacttaaagga 396  Q
    |||||||||||    
T  26724337 aacttaaagga 26724347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 39541441 - 39541504
Alignment:
Q  215 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||  |||| ||||||||||||| |||| |||| ||||||||| ||||||||||||    
T  39541441 aaaggacttatatgtgaccaaaataacttaaaggatcaatccgttacaaacctcaaacttaaag 39541504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 39714575 - 39714693
Alignment:
Q  219 gacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaaaaccaatctgt 316  Q
    |||||||| || |||||||||| ||||  ||| ||| | |||||||| |||||||||||  |  |||||| |||| ||||||||||||| | ||||||||    
T  39714575 gacttatgtgtaatcaaaataatttaaatgatcaatttattacaaacctcaaacttaaaaggatttatgtgtgaccaaaataacttaaacatcaatctgt 39714674  T
Q  317 tataaaccttaagcttaaa 335  Q
    || |||||| || ||||||    
T  39714675 taaaaacctcaaacttaaa 39714693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 361
Target Start/End: Complemental strand, 40286370 - 40286275
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataactt 361  Q
    |||||||||||  ||| ||| |||| |||||||||||||  | |||| |||||||||||| || |||||| ||||| |||||||||||||||||||    
T  40286370 caaacttaaaggacttctgtgtgaccaaaataacttaaaggaacaatatgttataaacctcaaacttaaaggacttatgtgtgatcaaaataactt 40286275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 25848399 - 25848321
Alignment:
Q  228 gtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||| ||||||||||||| ||| |||||| |||||||| ||||||||||| | ||| ||| |||| |||||||||||||    
T  25848399 gtgaccaaaataacttaacggactaatctattacaaacctcaaacttaaaggacttgtgtgtgaccaaaataacttaaa 25848321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 40209806 - 40209709
Alignment:
Q  268 caaacttaaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 365  Q
    ||||||||||| ||||||| |||  |||| ||||||||| | |||||| ||| |||||| ||  |||||| |||| |||||||||||||||||||||||    
T  40209806 caaacttaaagacttatgtgtgaacaaaacaacttaaaagatcaatctattagaaacctcaaatttaaat-acttatgtgtgatcaaaataacttaaaa 40209709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 396
Target Start/End: Complemental strand, 47573784 - 47573695
Alignment:
Q  309 caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||| ||||| |||||| || |||||| ||||| |||||||| ||||||| |||||  |  |||||||||||||||| ||||||||||||    
T  47573784 caatatgttacaaacctcaaacttaaaagacttatgtgtgataaaaataatttaaaggactaatatgttacaaacctcaaacttaaagga 47573695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 47891216 - 47891122
Alignment:
Q  233 caaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-accaatctgttataaacct 325  Q
    ||||||||||||| |||| |||||| ||||||| ||||||||||| | |||| || |||| ||||||| |||||| | |||||||||| ||||||    
T  47891216 caaaataacttaaaggatcaatctggtacaaacctcaaacttaaatgacttaggtgtgaccaaaataatttaaaagatcaatctgttacaaacct 47891122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 335
Target Start/End: Complemental strand, 3169797 - 3169716
Alignment:
Q  256 tgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaa 335  Q
    |||||||||| ||||||||||| |  |||| | |||||||||||||||||| ||||||||| ||| ||||||||| ||||||    
T  3169797 tgttacaaacctcaaacttaaaagatttatatgtgactaaaataacttaaagaaccaatctattacaaaccttaaacttaaa 3169716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 14964956 - 14964892
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| |||||||||||||  ||  |||||||||||||| ||||||||||||    
T  14964956 ttaaaggacttatgtgtgaccaaaataacttaaatgaccaatctgttacaaac-tcaaacttaaag 14964892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 26724280 - 26724345
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| ||||  |||||||||||| | || ||||| |||||||| ||||||||||||    
T  26724280 ttaaaggacttatgtgtgacgaaaataacttaaagaatcaatctattacaaacctcaaacttaaag 26724345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 30954957 - 30955078
Alignment:
Q  215 aaaggacttatgagtgatcaaaataactt-aatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaat 312  Q
    |||||||||||| |||| ||||||||||| || |||  ||||| |||||||  |||||| |||| | ||||||| |||| ||||||||||||| || |||    
T  30954957 aaaggacttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaacactaat 30955056  T
Q  313 ctgttataaaccttaagcttaa 334  Q
    || ||| |||||| || |||||    
T  30955057 ctattacaaacctcaaacttaa 30955078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 30970769 - 30970890
Alignment:
Q  215 aaaggacttatgagtgatcaaaataactt-aatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaat 312  Q
    |||||||||||| |||| ||||||||||| || |||  ||||| |||||||  |||||| |||| | ||||||| |||| ||||||||||||| || |||    
T  30970769 aaaggacttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaacactaat 30970868  T
Q  313 ctgttataaaccttaagcttaa 334  Q
    || ||| |||||| || |||||    
T  30970869 ctattacaaacctcaaacttaa 30970890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 36667289 - 36667357
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| ||||||| ||||||||||||||  |  ||| |||||||||||||||||||||||||    
T  36667289 cttaaaagacttatgtgtgaccaaaataacttaaaggacaaatctgttacaaaccttaaacttaaagga 36667357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 36667290 - 36667355
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| |||||||| |||| ||||||||||||| |||  |||||||||||||| | ||||||||||    
T  36667290 ttaaaagacttatgtgtgaccaaaataacttaaaggacaaatctgttacaaaccttaaacttaaag 36667355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 40286366 - 40286298
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| ||||||| ||||||||||||||  | |||||||||| |||||| ||||||||||||    
T  40286366 cttaaaggacttctgtgtgaccaaaataacttaaaggaacaatatgttataaacctcaaacttaaagga 40286298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 47069595 - 47069530
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||| ||||||| |||||||||||||||||| |||  ||| |||||||||| ||||| ||||||    
T  47069595 ttaaagaacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaacctcaaatttaaag 47069530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 47573762 - 47573697
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| |||||||| ||||| ||||||| |||| ||| |||| |||||||||| ||||||||||||    
T  47573762 ttaaaagacttatgtgtgataaaaataatttaaaggactaatatgttacaaacctcaaacttaaag 47573697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 7607695 - 7607759
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaa-tcaatatgttacaaaccttaaacttaaa 393  Q
    |||||| ||||| || |||| ||||||||||||||| |||||||||||||||| | |||||||||    
T  7607695 cttaaaagacttatgcgtgaccaaaataacttaaaaatcaatatgttacaaacatcaaacttaaa 7607759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 18020032 - 18020156
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    ||||| |||||||| || | |||||||||||||  ||  ||||||||| |||| | ||||||||| | ||||||| |||| ||||||||||||| || ||    
T  18020032 ttaaaagacttatgtgtaaccaaaataacttaaacgaccaatctgttataaaccttaaacttaaaggacttatgtttgaccaaaataacttaaataatca 18020131  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    |||| ||| |||||| || ||||||    
T  18020132 atctattacaaacctcaaacttaaa 18020156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 27768433 - 27768369
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    |||||||| ||||| |||||||||||||| |||  ||||||||| |||||||| ||| |||||||    
T  27768433 ttaaaggatttatgtgtgatcaaaataacataaatgattaatcttttacaaacatcatacttaaa 27768369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 30954963 - 30955078
Alignment:
Q  280 cttatgtctgactaaaataacttaaaa--accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa-atcaatatgtta 376  Q
    ||||||| |||| ||||||||||||||  |||||||| ||| ||| || || | |||| ||||| ||||||| |||||||||||||| |  ||| | |||    
T  30954963 cttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaacactaatctatta 30955062  T
Q  377 caaaccttaaacttaa 392  Q
    ||||||| ||||||||    
T  30955063 caaacctcaaacttaa 30955078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 30970775 - 30970890
Alignment:
Q  280 cttatgtctgactaaaataacttaaaa--accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa-atcaatatgtta 376  Q
    ||||||| |||| ||||||||||||||  |||||||| ||| ||| || || | |||| ||||| ||||||| |||||||||||||| |  ||| | |||    
T  30970775 cttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaacactaatctatta 30970874  T
Q  377 caaaccttaaacttaa 392  Q
    ||||||| ||||||||    
T  30970875 caaacctcaaacttaa 30970890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 396
Target Start/End: Complemental strand, 32186545 - 32186462
Alignment:
Q  315 gttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    ||||||||||| || |||||| |||||  |||||| ||||||| ||||||  | |||||| |||||||||| ||||||||||||    
T  32186545 gttataaacctcaaacttaaaagacttaggtgtgaccaaaatagcttaaaggaccaatatattacaaacctcaaacttaaagga 32186462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 32186703 - 32186750
Alignment:
Q  351 caaaataacttaaaa--tcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||    
T  32186703 caaaataacttaaaacatcaatatgttacaaacctcaaacttaaagga 32186750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 338
Target Start/End: Complemental strand, 28813961 - 28813838
Alignment:
Q  216 aaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaaaaccaatct 314  Q
    ||||||||||| |||| |||||||||||||  ||| ||| | |||||||  ||||||||||||  ||||| | ||||  |||||||||||| | ||||||    
T  28813961 aaggacttatgtgtgaccaaaataacttaaatgatcaatttattacaaatctcaaacttaaagaacttatatgtgacctaaataacttaaagatcaatct 28813862  T
Q  315 gttataaaccttaagcttaaatga 338  Q
     ||| |||||| || |||| ||||    
T  28813861 attacaaacctcaaacttacatga 28813838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 39253848 - 39253793
Alignment:
Q  223 tatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||| ||||||||||||| |||| |||  ||| |||||||||||||||||||||||    
T  39253848 tatgtgtgatcaaaataagttaaaggaccaatttgttacaaacttcaaacttaaag 39253793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 13903094 - 13903140
Alignment:
Q  233 caaaataacttaatggattaatctgttacaaacttcaaacttaaagt 279  Q
    ||||||||||||| |||||||| |||||||||| ||||| |||||||    
T  13903094 caaaataacttaaaggattaatatgttacaaacctcaaatttaaagt 13903140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 309
Target Start/End: Complemental strand, 40209796 - 40209706
Alignment:
Q  219 gacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaaaacc 309  Q
    |||||||| |||| ||||| |||||||  ||| ||||| ||| |||| ||||| |||||  ||||||| |||  |||||||||||||||||    
T  40209796 gacttatgtgtgaacaaaacaacttaaaagatcaatctattagaaacctcaaatttaaatacttatgtgtgatcaaaataacttaaaaacc 40209706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 40286365 - 40286275
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataactt 302  Q
    ||||||||||| || |||| ||||||||||||| |||  ||| ||||| |||| ||||||||||| | ||||||| |||  ||||||||||    
T  40286365 ttaaaggacttctgtgtgaccaaaataacttaaaggaacaatatgttataaacctcaaacttaaaggacttatgtgtgatcaaaataactt 40286275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 43650111 - 43650017
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa 306  Q
    ||||| || ||||| ||||||||||||||||||  ||  ||||| |||||| | ||||||||||| |  |||||| |||| ||||||||||||||    
T  43650111 ttaaaagatttatgtgtgatcaaaataacttaaatgaccaatctcttacaatcctcaaacttaaaggatttatgtgtgacgaaaataacttaaaa 43650017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 47573911 - 47573969
Alignment:
Q  219 gacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    |||||||  |||| ||||||||||||| |||| ||||| |||||||| |||||||||||    
T  47573911 gacttatatgtgaccaaaataacttaaaggatcaatctattacaaacctcaaacttaaa 47573969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 383
Target Start/End: Complemental strand, 47891215 - 47891122
Alignment:
Q  293 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaacct 383  Q
    |||||||||||||  | ||||||| || |||||| || ||||||||||||  |||||| |||||||| |||||  |||||| ||||||||||||    
T  47891215 aaaataacttaaaggatcaatctggtacaaacctcaaacttaaatgacttaggtgtgaccaaaataatttaaaagatcaatctgttacaaacct 47891122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 14624256 - 14624321
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaatc-aatatgttacaaaccttaaacttaaag 394  Q
    |||||| ||||| ||||||| || |||||||||||||| ||| | |||||||| ||||||||||||    
T  14624256 cttaaaagacttatgtgtgaccagaataacttaaaatctaatctattacaaacattaaacttaaag 14624321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 364
Target Start/End: Original strand, 14624260 - 14624348
Alignment:
Q  275 aaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 364  Q
    |||| ||||||| |||| | |||||||||||| | ||||| ||| |||| |||| |||||| ||||| ||| |||||||||||| |||||    
T  14624260 aaagacttatgtgtgaccagaataacttaaaatctaatctattacaaacattaaacttaaa-gacttatgtatgatcaaaataatttaaa 14624348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 18020031 - 18020099
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| ||||| | ||||||||||||||  | |||| ||||| |||||||||||||||||||    
T  18020031 cttaaaagacttatgtgtaaccaaaataacttaaacgaccaatctgttataaaccttaaacttaaagga 18020099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 18020092 - 18020157
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||||||  ||| |||||||||||||   || ||||| |||||||| ||||||||||||    
T  18020092 ttaaaggacttatgtttgaccaaaataacttaaataatcaatctattacaaacctcaaacttaaag 18020157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 25848354 - 25848289
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||| || |||| ||||||||||||| |||| ||| | |||||||  ||||||||||||    
T  25848354 ttaaaggacttgtgtgtgaccaaaataacttaaaggatcaatttattacaaatctcaaacttaaag 25848289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 26976506 - 26976571
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| |||||||| |||| ||||||||||||| ||| | || |||||||||  ||||||||||||    
T  26976506 ttaaatgacttatgtgtgaccaaaataacttaaaggacttatatgttacaaagctcaaacttaaag 26976571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 27768373 - 27768308
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| || ||||| || |||||||||||||||  ||| || || |||||||||||||||||||||    
T  27768373 ttaaaagatttatgtgtaatcaaaataacttaaatgatcaacctattacaaacttcaaacttaaag 27768308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 28814068 - 28814133
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||| |||||||  |||||||||||||||||  || |||||| |||||||| ||||| ||||||    
T  28814068 ttaaagaacttatgtctgatcaaaataacttaaaagactaatctattacaaacctcaaatttaaag 28814133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 36900083 - 36900151
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| || || |||| ||| |||||||||||||  |||||| | |||||||||||||||||||||||    
T  36900083 cttaaaggatttatgtgagattaaaataacttaaacgatcaatctcttacaaaccttaaacttaaagga 36900151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 40286517 - 40286582
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| | ||| |||||||||||| |||| || | ||||||||| ||||| ||||||    
T  40286517 ttaaaggacttatgtgcgataaaaataacttaaaggatcaaacggttacaaacctcaaatttaaag 40286582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 47573822 - 47573729
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaa 305  Q
    ||||| |||||||||| |  |||||||| |||| |||| ||| |||||||||| |||||||| |||| ||||||| |||  ||||||| |||||    
T  47573822 ttaaatgacttatgagcggccaaaataatttaaaggatcaatatgttacaaacctcaaacttaaaagacttatgtgtgataaaaataatttaaa 47573729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 47891329 - 47891397
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| ||||||| ||||||||||||||  | ||||||||| ||||||| ||||| ||||||    
T  47891329 cttaaaagacttatgtgtgaccaaaataacttaaaggaccaatatgttgcaaacctcaaactcaaagga 47891397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 47891330 - 47891423
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    ||||| |||||||| |||| ||||||||||||| |||  ||| |||| ||||| ||||||| ||| | ||||||| |||  |||||||||||||    
T  47891330 ttaaaagacttatgtgtgaccaaaataacttaaaggaccaatatgttgcaaacctcaaactcaaaggacttatgtgtgatcaaaataacttaaa 47891423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 50332664 - 50332737
Alignment:
Q  234 aaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa 306  Q
    |||||||||||  |||||||| ||| |||||| ||||||||||| | ||||||| | || ||||||||||||||    
T  50332664 aaaataacttagaggattaatttgtaacaaacctcaaacttaaaggacttatgtgtaaccaaaataacttaaaa 50332737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 50332703 - 50332768
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| || | |||||||||||||  ||| ||| | |||||||| ||||||||||||    
T  50332703 ttaaaggacttatgtgtaaccaaaataacttaaaagatcaatttattacaaacatcaaacttaaag 50332768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 383
Target Start/End: Original strand, 36375008 - 36375124
Alignment:
Q  268 caaacttaaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataactt-aaaat 366  Q
    ||||||||||  ||||| | |||| ||||||| |||||   |||||| ||||||| || || ||||||  |||| ||  ||||||||||||||| ||||     
T  36375008 caaacttaaaaacttatttgtgaccaaaataatttaaaggtcaatctattataaatctcaaacttaaaaaacttatgcatgatcaaaataacttaaaaaa 36375107  T
Q  367 caatatgttacaaacct 383  Q
    |||| ||||||||||||    
T  36375108 caatctgttacaaacct 36375124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 36900084 - 36900208
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||| ||||| | ||| ||||||||||||  ||| ||||| |||||||| | ||||||||| | | ||||| | || |||||||||||||  ||||    
T  36900084 ttaaaggatttatgtgagattaaaataacttaaacgatcaatctcttacaaaccttaaacttaaaggacctatgtgtaaccaaaataacttaaaggacca 36900183  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    |||| ||||||| || || ||||||    
T  36900184 atctattataaatctcaaacttaaa 36900208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 39714642 - 39714694
Alignment:
Q  343 tgtgtgatcaaaataacttaaa-atcaatatgttacaaaccttaaacttaaag 394  Q
    ||||||| |||||||||||||| |||||| ||||| |||||| ||||||||||    
T  39714642 tgtgtgaccaaaataacttaaacatcaatctgttaaaaacctcaaacttaaag 39714694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 45131485 - 45131441
Alignment:
Q  234 aaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||||  ||| |||||||||||||| ||||||||||||    
T  45131485 aaaataacttaaatgatcaatctgttacaaacctcaaacttaaag 45131441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 47069653 - 47069541
Alignment:
Q  215 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa-aaccaat 312  Q
    |||||||||||| |||| |||||||||| || | |  ||| |||||||||  ||||||||||||  ||||||| |||  |||||||||||||  ||||||    
T  47069653 aaaggacttatgtgtgaccaaaataactaaaagaaccaatttgttacaaaactcaaacttaaagaacttatgtgtgatcaaaataacttaaaggaccaat 47069554  T
Q  313 ctgttataaacct 325  Q
     ||||| ||||||    
T  47069553 atgttacaaacct 47069541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 328
Target Start/End: Complemental strand, 15563971 - 15563855
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaa 311  Q
    ||||||||||||||  ||| ||||||||||| | | |||||| |||||||| | ||||||||||| | ||||||| ||||||||||||||||||||  ||    
T  15563971 ttaaaggacttatgtatgaccaaaataactttaagtattaatatgttacaaccctcaaacttaaaagacttatgtgtgactaaaataacttaaaaattaa 15563872  T
Q  312 tctgttataaaccttaa 328  Q
    ||||||| |||||||||    
T  15563871 tctgttacaaaccttaa 15563855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 280 - 396
Target Start/End: Original strand, 27128093 - 27128212
Alignment:
Q  280 cttatgtctgactaaaataacttaaaaac--caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataa-cttaaaatcaatatgtta 376  Q
    ||||||| |||| |||||||||||||||   |||| ||||| ||||||||| |||||| |||||||||||||||||||||| || |||| |||| | |||    
T  27128093 cttatgtgtgaccaaaataacttaaaaagatcaatttgttagaaaccttaaacttaaaggacttgtgtgtgatcaaaataacctaaaaaccaatctatta 27128192  T
Q  377 caaaccttaaacttaaagga 396  Q
    ||||||| ||||||||||||    
T  27128193 caaacctcaaacttaaagga 27128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 280 - 396
Target Start/End: Complemental strand, 41151524 - 41151405
Alignment:
Q  280 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 376  Q
    ||||||| |||| |||||||||||||  ||||||||||||  || || || |||||| ||||| ||||||||||||||||||||||  | ||||||||||    
T  41151524 cttatgtgtgaccaaaataacttaaaggaccaatctgttactaaactcaaacttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgtta 41151425  T
Q  377 caaaccttaaacttaaagga 396  Q
    |||| || ||||||||||||    
T  41151424 caaaactcaaacttaaagga 41151405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 27128001 - 27127892
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaa-aaccaa 311  Q
    |||||||||||||| |||| ||||||||||||| | || |||||||||||||| |||||||||||  ||||||| |||  ||||||||||||| ||||||    
T  27128001 ttaaaggacttatgtgtgaccaaaataacttaaagaatcaatctgttacaaac-tcaaacttaaa-acttatgtgtgatcaaaataacttaaataaccaa 27127904  T
Q  312 tctgttataaac 323  Q
    ||||||| ||||    
T  27127903 tctgttacaaac 27127892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 6220393 - 6220517
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||| |||| || |||||||||| | |  |||||||||||||  ||||||||||||  ||||||| |||| ||||||||||||| |||||    
T  6220393 ttaaaggacttatgtgtgaccacaataacttaaagtaccaatctgttacaaatctcaaacttaaagaacttatgtgtgacaaaaataacttaaagaacca 6220492  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    || ||||| |||||| || ||||||    
T  6220493 atttgttacaaacctcaaacttaaa 6220517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 24083263 - 24083334
Alignment:
Q  293 aaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 364  Q
    ||||||||||||||| |||||||||| |||||| || |||||| | ||| ||||||||||||||||||||||    
T  24083263 aaaataacttaaaaatcaatctgttacaaacctcaaacttaaaagccttatgtgtgatcaaaataacttaaa 24083334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 414
Target Start/End: Complemental strand, 9399935 - 9399798
Alignment:
Q  280 cttatgtctgactaaaataacttaaaaac-caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 376  Q
    ||||||| |||| ||||||||||||| |  || ||| ||| ||||||||| |||||| |||||  |||||| |||| |||||||||  | ||||||||||    
T  9399935 cttatgtgtgaccaaaataacttaaagagtcactctattacaaaccttaaacttaaaggacttacgtgtgaccaaagtaacttaaagaaccaatatgtta 9399836  T
Q  377 caaaccttaaacttaaaggatccttagtataatctacc 414  Q
    ||||||| |||||||||||| || |||| |||| ||||    
T  9399835 caaacctcaaacttaaaggacccctagtgtaatgtacc 9399798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 41151679 - 41151741
Alignment:
Q  215 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    |||||||||||| |||| ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  41151679 aaaggacttatgtgtgaccaaaataacttaaaggactaatctgttacaaacctcaaacttaaa 41151741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 24909609 - 24909741
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||  |||| ||||||| |||||  ||||||||| || |||||| || |||||| ||||| ||||||||||||||||||||||     
T  24909609 caaacttaaaggacttatgcgtgaccaaaataatttaaaggaccaatctgctacaaacctcaaacttaaaggacttatgtgtgatcaaaataacttaaag 24909708  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     | |||| ||||||||| || ||||||||||||    
T  24909709 gaccaatttgttacaaatctcaaacttaaagga 24909741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 394
Target Start/End: Original strand, 27052625 - 27052729
Alignment:
Q  293 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgttacaaaccttaaact 389  Q
    |||||||||||||  ||||||||||||||||||| || |||||| ||||| |||| ||  ||||||||||||  ||||||| | |||||||||| |||||    
T  27052625 aaaataacttaaaggaccaatctgttataaacctcaaacttaaaggacttatgtgcgacaaaaataacttaaagaatcaatctattacaaacctcaaact 27052724  T
Q  390 taaag 394  Q
    |||||    
T  27052725 taaag 27052729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 335
Target Start/End: Original strand, 27052613 - 27052728
Alignment:
Q  222 ttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttat 319  Q
    ||||| |||||||||||||||||| |||  ||||||||| |||| ||||||||||| | |||||||  ||| ||||||||||||| || |||||| |||     
T  27052613 ttatgtgtgatcaaaataacttaaaggaccaatctgttataaacctcaaacttaaaggacttatgtgcgacaaaaataacttaaagaatcaatctattac 27052712  T
Q  320 aaaccttaagcttaaa 335  Q
    |||||| || ||||||    
T  27052713 aaacctcaaacttaaa 27052728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 336
Target Start/End: Original strand, 41151616 - 41151742
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaa-aacc 309  Q
    |||||||||||||| |||| ||||| ||||||| |||  ||||||||||||||  | ||||||||  | ||||||| |||| |||||||||||||  ||     
T  41151616 ttaaaggacttatgtgtgaccaaaagaacttaaaggaccaatctgttacaaaccacgaacttaaaaggacttatgtgtgaccaaaataacttaaaggact 41151715  T
Q  310 aatctgttataaaccttaagcttaaat 336  Q
    ||||||||| |||||| || |||||||    
T  41151716 aatctgttacaaacctcaaacttaaat 41151742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 20209465 - 20209597
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||| ||||| | |||| |||||||||||||  | |||||||||| |||||| || | |||| ||||| ||||||| |||||||| |||||     
T  20209465 caaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaag 20209564  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     |  |||||||||||||||| ||| ||||||||    
T  20209565 gactaatatgttacaaacctcaaatttaaagga 20209597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 20209470 - 20209563
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaac-ttaaagtcttatgtctgactaaaataacttaaa 305  Q
    |||||| ||||||  |||| ||||||||||||| |||| |||||||||||||| |||||| | |||| ||||||| |||| ||||||| |||||    
T  20209470 ttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaa 20209563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 20229173 - 20229305
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||| ||||| | |||| |||||||||||||  | |||||||||| |||||| || | |||| ||||| ||||||| |||||||| |||||     
T  20229173 caaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaag 20229272  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     |  |||||||||||||||| ||| ||||||||    
T  20229273 gactaatatgttacaaacctcaaatttaaagga 20229305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 20229178 - 20229271
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaac-ttaaagtcttatgtctgactaaaataacttaaa 305  Q
    |||||| ||||||  |||| ||||||||||||| |||| |||||||||||||| |||||| | |||| ||||||| |||| ||||||| |||||    
T  20229178 ttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaa 20229271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 396
Target Start/End: Complemental strand, 24827481 - 24827357
Alignment:
Q  275 aaagtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaata 371  Q
    |||| ||||||| ||||||||||||||||||  || ||||| ||| |||| | || |||||| |||||   ||||||||| ||||||||||  | ||||     
T  24827481 aaagacttatgtgtgactaaaataacttaaatgacaaatctattacaaacatcaaacttaaaggacttagttgtgatcaatataacttaaatgaccaatc 24827382  T
Q  372 tgttacaaaccttaaacttaaagga 396  Q
    |||||||||||| ||||||||||||    
T  24827381 tgttacaaacctcaaacttaaagga 24827357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 24909614 - 24909707
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| |||| |||||||| |||| |||  |||||| ||||||| ||||||||||| | ||||||| |||  |||||||||||||    
T  24909614 ttaaaggacttatgcgtgaccaaaataatttaaaggaccaatctgctacaaacctcaaacttaaaggacttatgtgtgatcaaaataacttaaa 24909707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 24909674 - 24909739
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||||||||||||||||| |||  ||| |||||||||  ||||||||||||    
T  24909674 ttaaaggacttatgtgtgatcaaaataacttaaaggaccaatttgttacaaatctcaaacttaaag 24909739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 363
Target Start/End: Complemental strand, 27052556 - 27052443
Alignment:
Q  252 aatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtga 349  Q
    ||||| |||||||  ||||||||||||  ||||||| ||||  ||||||||||||  |||||| ||||| ||||||||| |||||||||||| | |||||    
T  27052556 aatctattacaaatctcaaacttaaaggacttatgtgtgaccgaaataacttaaaggaccaatgtgttacaaaccttaaacttaaatgacttatatgtga 27052457  T
Q  350 tcaaaataacttaa 363  Q
      ||||||||||||    
T  27052456 ctaaaataacttaa 27052443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 41151472 - 41151407
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||||||||||||||||| |||  ||| |||||||||  ||||||||||||    
T  41151472 ttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaaactcaaacttaaag 41151407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 396
Target Start/End: Original strand, 6220401 - 6220520
Alignment:
Q  280 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgtta 376  Q
    ||||||| |||| | |||||||||||  |||||||||||| ||| || || ||||||  |||| |||||||  ||||||||||||  || |||| |||||    
T  6220401 cttatgtgtgaccacaataacttaaagtaccaatctgttacaaatctcaaacttaaagaacttatgtgtgacaaaaataacttaaagaaccaatttgtta 6220500  T
Q  377 caaaccttaaacttaaagga 396  Q
    ||||||| ||||||||||||    
T  6220501 caaacctcaaacttaaagga 6220520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 27052535 - 27052443
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaa 304  Q
    |||||||||||||| |||| | ||||||||||| |||  ||| |||||||||| | ||||||||| | ||||| | |||||||||||||||||    
T  27052535 ttaaaggacttatgtgtgaccgaaataacttaaaggaccaatgtgttacaaaccttaaacttaaatgacttatatgtgactaaaataacttaa 27052443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 36053057 - 36053153
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaac 308  Q
    |||||| ||||||| ||||  |||||||||||| |||| ||| | |||||||| ||||| ||||| | ||||| | |||||||||||||||||||||    
T  36053057 ttaaagaacttatgtgtgactaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaac 36053153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 305
Target Start/End: Complemental strand, 41151531 - 41151439
Alignment:
Q  214 taaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    ||||||||||||| |||| ||||||||||||| |||  |||||||||| ||  ||||||||||| | ||||||| |||  |||||||||||||    
T  41151531 taaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttactaaactcaaacttaaaggacttatgtgtgatcaaaataacttaaa 41151439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 9400109 - 9400166
Alignment:
Q  343 tgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatc 398  Q
    ||||||| ||||||||||||||  ||||||||||||||||||| ||||||||| ||||    
T  9400109 tgtgtgaccaaaataacttaaacgatcaatatgttacaaacctcaaacttaaaagatc 9400166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 393
Target Start/End: Complemental strand, 27052560 - 27052471
Alignment:
Q  306 aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 393  Q
    ||||||||| ||| ||| || || |||||| ||||| ||||||| | ||||||||||||  | |||| ||||||||||||||||||||||    
T  27052560 aaccaatctattacaaatctcaaacttaaaggacttatgtgtgaccgaaataacttaaaggaccaatgtgttacaaaccttaaacttaaa 27052471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 27128006 - 27127878
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa-- 363  Q
    |||||||||||  ||||||| |||| ||||||||||||| || |||||||||| |||| | || ||||||  |||| |||||||||||||||||||||      
T  27128006 caaacttaaaggacttatgtgtgaccaaaataacttaaagaatcaatctgttacaaac-tcaaacttaaa--acttatgtgtgatcaaaataacttaaat 27127910  T
Q  364 aatcaatatgttacaaaccttaaacttaaagga 396  Q
    || |||| ||||||||| || ||||||||||||    
T  27127909 aaccaatctgttacaaa-ctcaaacttaaagga 27127878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 394
Target Start/End: Complemental strand, 27855648 - 27855559
Alignment:
Q  307 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaag 394  Q
    ||||||||| || ||||||  | ||||||||| || |||||| |||||||||||||||  | |||| | |||||||||||||||||||||    
T  27855648 accaatctgctacaaacctcgaacttaaatgatttatgtgtgttcaaaataacttaaaggaccaatctattacaaaccttaaacttaaag 27855559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 22813176 - 22813116
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaaggat 397  Q
    |||||||||||| |||||||||||||||||||       ||||||||||||||| |||||||||||||    
T  22813176 cttaaatgacttatgtgtgatcaaaataactt-------atatgttacaaacctcaaacttaaaggat 22813116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 24083256 - 24083305
Alignment:
Q  345 tgtgatcaaaataacttaaaa-tcaatatgttacaaaccttaaacttaaa 393  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  24083256 tgtgatcaaaataacttaaaaatcaatctgttacaaacctcaaacttaaa 24083305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 24083257 - 24083344
Alignment:
Q  228 gtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaa-aaccaatct 314  Q
    ||||||||||||||||||   || |||||||||||||| |||||||| |||| ||||||| |||  ||||||||||||| |||||||||    
T  24083257 gtgatcaaaataacttaaaa-atcaatctgttacaaacctcaaacttaaaagccttatgtgtgatcaaaataacttaaataaccaatct 24083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 402
Target Start/End: Complemental strand, 6220307 - 6220177
Alignment:
Q  275 aaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaata 371  Q
    |||| ||||||| |||| ||||| |||||||  ||||||| |||| |||||| || |||||| ||||| | ||| |  |||||||||||||  | ||||     
T  6220307 aaagacttatgtgtgacaaaaattacttaaatgaccaatcagttacaaacctcaaacttaaaggacttatctgttacaaaaataacttaaaggaccaatt 6220208  T
Q  372 tgttacaaaccttaaacttaaaggatcctta 402  Q
    |||| ||||||| |||||||||||| |||||    
T  6220207 tgtttcaaacctcaaacttaaaggaccctta 6220177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 27128092 - 27128153
Alignment:
Q  338 acttgtgtgtgatcaaaataacttaaa---atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||| ||||||| ||||||||||||||   |||||| ||||| |||||||||||||||||||    
T  27128092 acttatgtgtgaccaaaataacttaaaaagatcaatttgttagaaaccttaaacttaaagga 27128153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 24827424 - 24827359
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||||   |||||||| |||||||||  ||  |||||||||||||| ||||||||||||    
T  24827424 ttaaaggacttagttgtgatcaatataacttaaatgaccaatctgttacaaacctcaaacttaaag 24827359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 27052664 - 27052729
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| | ||  |||||||||||| | || ||||| |||||||| ||||||||||||    
T  27052664 ttaaaggacttatgtgcgacaaaaataacttaaagaatcaatctattacaaacctcaaacttaaag 27052729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 394
Target Start/End: Original strand, 36053052 - 36053181
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 365  Q
    |||||||||||  ||||||| ||||||||||||||||||  | |||| | ||| |||||| ||  ||||||||||| | |||||  ||||||||||||||    
T  36053052 caaacttaaagaacttatgtgtgactaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa 36053151  T
Q  366 tc-aatatgttacaaaccttaaacttaaag 394  Q
     | ||| | |||||||| | ||||||||||    
T  36053152 acaaatttattacaaacgtcaaacttaaag 36053181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 15563912 - 15563848
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaa-tcaatatgttacaaaccttaaacttaaa 393  Q
    |||||| ||||| |||||||  |||||||||||||| | ||| |||||||||||||||| |||||    
T  15563912 cttaaaagacttatgtgtgactaaaataacttaaaaattaatctgttacaaaccttaaatttaaa 15563848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 396
Target Start/End: Original strand, 27052616 - 27052671
Alignment:
Q  343 tgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    ||||||||||||||||||||||  | |||| ||||| |||||| ||||||||||||    
T  27052616 tgtgtgatcaaaataacttaaaggaccaatctgttataaacctcaaacttaaagga 27052671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 393
Target Start/End: Complemental strand, 38414699 - 38414597
Alignment:
Q  293 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 389  Q
    |||| ||||||||| | |||||||||| |||||| || ||||||  | || |||||||||||||||| |||||  || |||||||||||||||| ||| |    
T  38414699 aaaaaaacttaaaacatcaatctgttacaaacctcaaacttaaaa-atttatgtgtgatcaaaataaattaaatgataaatatgttacaaacctcaaatt 38414601  T
Q  390 taaa 393  Q
    ||||    
T  38414600 taaa 38414597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 221 - 340
Target Start/End: Complemental strand, 6222198 - 6222078
Alignment:
Q  221 cttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaaa-accaatctgttat 319  Q
    |||||| |||| |||||||||||||   | |||||||||||||| || |||||||||| ||||||| ||||||||||||||||||| |||||| | |||     
T  6222198 cttatgtgtgaccaaaataacttaaataactaatctgttacaaattttaaacttaaagacttatgtgtgactaaaataacttaaaagaccaatatattac 6222099  T
Q  320 aaaccttaagcttaaatgact 340  Q
    ||||||||| |||||| ||||    
T  6222098 aaaccttaaacttaaaggact 6222078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 11975574 - 11975451
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaa 311  Q
    |||||||||||||| |||| || |||||||||| |||| ||| |||||||||| ||||||||||| | ||||||| || | |||||||||||||||| ||    
T  11975574 ttaaaggacttatgtgtgaccacaataacttaaaggatcaatatgttacaaacctcaaacttaaaggacttatgtgtgtcaaaaataacttaaaaactaa 11975475  T
Q  312 tctgttataaaccttaagcttaaa 335  Q
    | | ||| |||||| || ||||||    
T  11975474 tttattacaaacctcaaacttaaa 11975451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 29710387 - 29710322
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||  |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  29710387 ttaaaggacttatatgtgaccaaaataacttaaaggattaatctgttacaaacgtcaaacttaaag 29710322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 30869610 - 30869703
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||| | ||||| |||||||||||| |||  |||||||||||||| ||||||||||||  ||||||| |||| |||||||||||||    
T  30869610 ttaaaggacttacgcgtgataaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagaacttatgtatgaccaaaataacttaaa 30869703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 213 - 325
Target Start/End: Complemental strand, 46713337 - 46713224
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaa-aaccaa 311  Q
    |||||||||||||| || || ||||||| ||||  || |||| | ||||||||||||||||||||| ||||||| |||| ||||||||||||| ||| ||    
T  46713337 ttaaaggacttatgtgttattaaaataatttaaatgactaatttattacaaacttcaaacttaaagacttatgtatgaccaaaataacttaaataactaa 46713238  T
Q  312 tctgttataaacct 325  Q
    ||| ||| ||||||    
T  46713237 tctattacaaacct 46713224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 396
Target Start/End: Complemental strand, 6222198 - 6222080
Alignment:
Q  280 cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaat--caatatgtta 376  Q
    ||||||| |||| ||||||||||||| ||| ||||||||| |||  |||| |||||| ||||| |||||||  ||||||||||||||   |||||| |||    
T  6222198 cttatgtgtgaccaaaataacttaaataactaatctgttacaaattttaaacttaaa-gacttatgtgtgactaaaataacttaaaagaccaatatatta 6222100  T
Q  377 caaaccttaaacttaaagga 396  Q
    ||||||||||||||||||||    
T  6222099 caaaccttaaacttaaagga 6222080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 27576541 - 27576670
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||| |||| ||||||||| ||| |||  |||| ||||||||  ||||||||||| | ||||||| |||| |||||||||||||  ||||    
T  27576541 ttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaatgacttatgtgtgaccaaaataacttaaaggacca 27576640  T
Q  311 atctgttataaaccttaagcttaaatgact 340  Q
    |||||||| |||| | || |||||| ||||    
T  27576641 atctgttacaaacgtcaaacttaaaggact 27576670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 396
Target Start/End: Complemental strand, 29710467 - 29710320
Alignment:
Q  252 aatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgat 350  Q
    ||||| |||||||  |||||||||||| |||| || |||| |||||||||||||  |||||| ||||| |||  | || |||||| ||||| | |||||     
T  29710467 aatctattacaaatatcaaacttaaagacttaagtgtgaccaaaataacttaaaggaccaatatgttacaaatatcaaacttaaaggacttatatgtgac 29710368  T
Q  351 caaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    ||||||||||||||  || ||| |||||||||| | ||||||||||||    
T  29710367 caaaataacttaaaggattaatctgttacaaacgtcaaacttaaagga 29710320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 305
Target Start/End: Original strand, 27280822 - 27280912
Alignment:
Q  216 aaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaa 305  Q
    ||||||||||| || | ||||||||||||| |||| ||| |||||  ||| ||||||||||||| ||||||| |||| |||||||||||||    
T  27280822 aaggacttatgtgttaccaaaataacttaaaggatcaatttgttatgaacctcaaacttaaagtacttatgtgtgaccaaaataacttaaa 27280912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 278
Target Start/End: Original strand, 41666357 - 41666419
Alignment:
Q  216 aaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||| |||||| ||||||||||| |||  |||||||||||||| ||||||||||||    
T  41666357 aaggacttatgtgtgatcgaaataacttaagggacaaatctgttacaaacctcaaacttaaag 41666419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 6694739 - 6694807
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| ||||||| ||||||||||||||  | ||||||||||||||||| ||||||||||||    
T  6694739 cttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaacctcaaacttaaagga 6694807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 6694740 - 6694805
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| ||||||||||||| |||  ||| |||||||||| ||||||||||||    
T  6694740 ttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaacctcaaacttaaag 6694805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 11975575 - 11975507
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| ||||||| || |||||||||||  ||||||||||||||||||| ||||||||||||    
T  11975575 cttaaaggacttatgtgtgaccacaataacttaaaggatcaatatgttacaaacctcaaacttaaagga 11975507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 27280741 - 27280648
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||| | || | |||||||||||||  ||||||||| |||| ||| ||||||||||| | ||||||| || |||||||||||||||    
T  27280741 ttaaaggacttacgtgttaccaaaataacttaagtgattaatctcttacgaacctcaaacttaaatgacttatgtgtggctaaaataacttaaa 27280648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 27576536 - 27576668
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| |||| |||||||| ||||  ||||||| |||| |||  | || |||||||||||| ||||||| ||||||||||||||     
T  27576536 caaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaatgacttatgtgtgaccaaaataacttaaag 27576635  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     | |||| |||||||||| | ||||||||||||    
T  27576636 gaccaatctgttacaaacgtcaaacttaaagga 27576668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 29710525 - 29710657
Alignment:
Q  268 caaacttaaa-gtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||| | ||||||| |||| |||||||||||||  ||||||| |||| ||| || || |||||||||||| ||||| | ||||||||| ||||     
T  29710525 caaacttaaatgacttatgtgtgacgaaaataacttaaaggaccaatccgttacaaatctcaaacttaaatgacttatgtgttaccaaaataacctaaaa 29710624  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     | |||| |||||||||| | ||||||||||||    
T  29710625 gaccaatctgttacaaacgtcaaacttaaagga 29710657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 44293977 - 44294109
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||| ||||| | |||| |||||||||||||  | |||||||||| |||||| || | |||| ||||| ||||||| |||||||| |||||     
T  44293977 caaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaag 44294076  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     |  |||||||||||||||| ||| ||||||||    
T  44294077 gactaatatgttacaaacctcaaatttaaagga 44294109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 44293982 - 44294075
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaac-ttaaagtcttatgtctgactaaaataacttaaa 305  Q
    |||||| ||||||  |||| ||||||||||||| |||| |||||||||||||| |||||| | |||| ||||||| |||| ||||||| |||||    
T  44293982 ttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaa 44294075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 4048423 - 4048523
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaa-cttcaaacttaaagtcttatgtctgactaaaataacttaaaaaccaa 311  Q
    |||||||||||||| || | |||||||||||||  ||| ||||||||||||| ||| || || ||||  |||||| | || |||||||||||||||||||    
T  4048423 ttaaaggacttatgtgtaaccaaaataacttaaatgatcaatctgttacaaatcttaaacctaaaagatttatgtgtcaccaaaataacttaaaaaccaa 4048522  T
Q  312 t 312  Q
    |    
T  4048523 t 4048523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 365
Target Start/End: Complemental strand, 30662284 - 30662188
Alignment:
Q  270 aacttaaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 365  Q
    ||||||||| ||||||| | | |||||||| |||||  | |||||||||||||| || || |||||| ||||| ||||| |||||||||||||||||    
T  30662284 aacttaaagacttatgtgtaattaaaataatttaaatgatcaatctgttataaatctcaaacttaaaggacttatgtgtaatcaaaataacttaaaa 30662188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 396
Target Start/End: Complemental strand, 42312850 - 42312759
Alignment:
Q  307 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||||| ||| ||| || || |||||| ||||| ||||||| ||||||||||||||  | |||||| |||||||||| ||||||||||||    
T  42312850 accaatctattacaaatctcaaacttaaaggacttatgtgtgaccaaaataacttaaatgaccaatatattacaaacctcaaacttaaagga 42312759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 409
Target Start/End: Original strand, 11975659 - 11975791
Alignment:
Q  280 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 376  Q
    ||||||| |||| |||||||||||||  ||||||| |||| |||||| || |||||| ||||| | ||| |  |||||||||||||  | |||| ||||     
T  11975659 cttatgtgtgacaaaaataacttaaaggaccaatcagttacaaacctcaaacttaaaggacttatctgttacaaaaataacttaaaggaccaatctgttt 11975758  T
Q  377 caaaccttaaacttaaaggatccttagtataat 409  Q
    |||| || |||||||||||| ||||| ||||||    
T  11975759 caaatctcaaacttaaaggacccttaatataat 11975791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 27280879 - 27280944
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||| ||||||| |||| ||||||||||||| || | || ||||||||||| ||||||||||||    
T  27280879 ttaaagtacttatgtgtgaccaaaataacttaaagggtcaagctgttacaaacctcaaacttaaag 27280944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 29710530 - 29710659
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-acca 310  Q
    ||||| |||||||| ||||  |||||||||||| |||  |||| ||||||||  ||||||||||| | ||||||| | || |||||||| ||||| ||||    
T  29710530 ttaaatgacttatgtgtgacgaaaataacttaaaggaccaatccgttacaaatctcaaacttaaatgacttatgtgttaccaaaataacctaaaagacca 29710629  T
Q  311 atctgttataaaccttaagcttaaatgact 340  Q
    |||||||| |||| | || |||||| ||||    
T  29710630 atctgttacaaacgtcaaacttaaaggact 29710659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 30662222 - 30662157
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| || |||||||||||||||  || ||||||||||| ||||| ||| ||||||    
T  30662222 ttaaaggacttatgtgtaatcaaaataacttaaaagactaatctgttacgaactttaaatttaaag 30662157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 31453052 - 31453117
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| ||||  ||||||||||||   | ||||||||||||||| ||||||||||||    
T  31453052 ttaaaggacttatgtgtgacaaaaataacttaaataactaatctgttacaaacctcaaacttaaag 31453117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 4048269 - 4048205
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    |||||| ||||||| |||| ||||||||||||| | |||| ||| |||||||| |||||||||||    
T  4048269 ttaaagaacttatgtgtgaccaaaataacttaaagaattagtctattacaaacctcaaacttaaa 4048205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 6694657 - 6694534
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-acca 310  Q
    |||||||||||||| || | ||||||||||||| |||| ||||| ||||||||  |||||||||| | |||||||  ||  |||||||||||||| ||||    
T  6694657 ttaaaggacttatgtgtaa-caaaataacttaaaggatcaatctattacaaaccacaaacttaaaggacttatgtgggaacaaaataacttaaaagacca 6694559  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    || | ||| |||||| || ||||||    
T  6694558 atttattacaaacctcaaacttaaa 6694534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 11975653 - 11975757
Alignment:
Q  215 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaat 312  Q
    |||||||||||| ||||  |||||||||||| |||  |||| ||||||||| ||||||||||| | ||||| | | || |||||||||||||  ||||||    
T  11975653 aaaggacttatgtgtgacaaaaataacttaaaggaccaatcagttacaaacctcaaacttaaaggacttatctgttacaaaaataacttaaaggaccaat 11975752  T
Q  313 ctgtt 317  Q
    |||||    
T  11975753 ctgtt 11975757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 396
Target Start/End: Original strand, 27280827 - 27280946
Alignment:
Q  280 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 376  Q
    ||||||| | || |||||||||||||  | |||| |||||| ||||| || ||||||  |||| ||||||| ||||||||||||||   ||||  |||||    
T  27280827 cttatgtgttaccaaaataacttaaaggatcaatttgttatgaacctcaaacttaaagtacttatgtgtgaccaaaataacttaaagggtcaagctgtta 27280926  T
Q  377 caaaccttaaacttaaagga 396  Q
    ||||||| ||||||||||||    
T  27280927 caaacctcaaacttaaagga 27280946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 396
Target Start/End: Original strand, 30869631 - 30869737
Alignment:
Q  293 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 389  Q
    |||||||||||||  |||||||||||| |||||| || ||||||  |||| ||| ||| ||||||||||||||  | ||||   |||||||||| |||||    
T  30869631 aaaataacttaaaggaccaatctgttacaaacctcaaacttaaagaacttatgtatgaccaaaataacttaaaggaccaatcaattacaaacctcaaact 30869730  T
Q  390 taaagga 396  Q
    |||||||    
T  30869731 taaagga 30869737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 40951853 - 40951918
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 393  Q
    ||||||||| || ||||||| ||||||||||||||  |||||| | |||||||||| |||||||||    
T  40951853 cttaaatgatttatgtgtgaccaaaataacttaaatgatcaatctattacaaacctcaaacttaaa 40951918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 396
Target Start/End: Complemental strand, 41666238 - 41666204
Alignment:
Q  362 aaaatcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||||||||||||||||||| ||||||||||||    
T  41666238 aaaatcaatatgttacaaacctcaaacttaaagga 41666204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 42313061 - 42313127
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataactt-aatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| ||||||||||| || |||| |  ||||||||||| ||||||||||||    
T  42313061 ttaaaggacttatgtgtgaccaaaataacttaaaaggatcagcctgttacaaacgtcaaacttaaag 42313127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 3198256 - 3198219
Alignment:
Q  237 ataacttaatggattaatctgttacaaacttcaaactt 274  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  3198256 ataacttaaaggatcaatctgttacaaacttcaaactt 3198219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 42312826 - 42312761
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| |||||||||||||  ||  ||| | |||||||| ||||||||||||    
T  42312826 ttaaaggacttatgtgtgaccaaaataacttaaatgaccaatatattacaaacctcaaacttaaag 42312761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 40951854 - 40951918
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    ||||| || ||||| |||| |||||||||||||  ||| ||||| |||||||| |||||||||||    
T  40951854 ttaaatgatttatgtgtgaccaaaataacttaaatgatcaatctattacaaacctcaaacttaaa 40951918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 42313007 - 42313095
Alignment:
Q  219 gacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaaa 306  Q
    |||||||| |||| |||||||| |||| |||  ||| |||||||||  ||||| ||||||  ||||||| |||| ||||||||||||||    
T  42313007 gacttatgtgtgaccaaaataatttaaaggaccaatttgttacaaatatcaaatttaaaggacttatgtgtgaccaaaataacttaaaa 42313095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 26879611 - 26879735
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaa-aacca 310  Q
    ||||||||| |||  |||||||||||||||||| |||| |||||||| |||||||||||||| |||| ||||||| |||  |||||||||||||  ||||    
T  26879611 ttaaaggacatatatgtgatcaaaataacttaaaggatcaatctgtttcaaacttcaaacttaaaagacttatgtgtgataaaaataacttaaatgacca 26879710  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    |||||||| |||||| || ||||||    
T  26879711 atctgttacaaacctcaaacttaaa 26879735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 7490026 - 7489933
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||| ||||| |||| |||||||||||||  |||||||||||||||||| ||||||||||| | ||||||| |||||||||||| |||||    
T  7490026 ttaaaggatttatgtgtgaccaaaataacttaaatgattaatctgttacaaacctcaaacttaaaggacttatgtgtgactaaaataatttaaa 7489933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 396
Target Start/End: Original strand, 40892532 - 40892636
Alignment:
Q  294 aaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaactta 391  Q
    ||||||||||||  ||||||||||| |||||| ||  ||||| ||||| ||||||| ||||||||||||||  ||||||||||||||||||| ||||| |    
T  40892532 aaataacttaaagtccaatctgttacaaacctcaaatttaaaggacttatgtgtgaccaaaataacttaaatgatcaatatgttacaaacctcaaactca 40892631  T
Q  392 aagga 396  Q
    |||||    
T  40892632 aagga 40892636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 1173142 - 1173075
Alignment:
Q  268 caaacttaaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaa 335  Q
    ||||||||||| ||||||| |||| |||||||||||||||| |||||||||||||||| || ||||||    
T  1173142 caaacttaaagacttatgtgtgaccaaaataacttaaaaactaatctgttataaacctcaaacttaaa 1173075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 393
Target Start/End: Complemental strand, 7490071 - 7489902
Alignment:
Q  228 gtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttataaacct 325  Q
    |||| |||||||| |||| |||| ||||| |||||||| ||||||||||| |  |||||| |||| |||||||||||||  |  ||||||||| ||||||    
T  7490071 gtgaccaaaataatttaaaggatcaatctattacaaacctcaaacttaaaggatttatgtgtgaccaaaataacttaaatgattaatctgttacaaacct 7489972  T
Q  326 taagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 393  Q
     || |||||| ||||| |||||||  ||||||| |||||  |||||| | | |||||||| |||||||||    
T  7489971 caaacttaaaggacttatgtgtgactaaaataatttaaatgatcaatctctcacaaacctcaaacttaaa 7489902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 52913096 - 52913034
Alignment:
Q  215 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    |||||| ||||| |||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  52913096 aaaggatttatgtgtgaccaaaataacttaaaggactaatctgttacaaacttcaaacttaaa 52913034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 18608705 - 18608640
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||| | |||| ||||||||||||| | || |||||||||||||| ||||||||||||    
T  18608705 ttaaaggacttaagtgtgaccaaaataacttaaagaatcaatctgttacaaacctcaaacttaaag 18608640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 18608789 - 18608913
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||   |||||||||||||||||   || |||||||||||||| |||||| |||| | ||||||| |||  |||||| ||||||  || |    
T  18608789 ttaaaggacttatctatgatcaaaataacttaaaatatcaatctgttacaaacatcaaacgtaaacgacttatgtgtgatcaaaatagcttaaaggacaa 18608888  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    || ||||||||||||||| ||||||    
T  18608889 atttgttataaaccttaaacttaaa 18608913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 395
Target Start/End: Complemental strand, 6314397 - 6314295
Alignment:
Q  292 taaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaactta 391  Q
    |||||||||||||| |  ||||||||| |||| |||| |||||| ||||| |||||||  ||||||| |||| |  ||| |||||||||||| |||||||    
T  6314397 taaaataacttaaacattaatctgttacaaactttaaacttaaa-gacttatgtgtgaaaaaaataatttaagacaaatctgttacaaacctcaaactta 6314299  T
Q  392 aagg 395  Q
    ||||    
T  6314298 aagg 6314295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 396
Target Start/End: Original strand, 26879632 - 26879738
Alignment:
Q  293 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 389  Q
    |||||||||||||  | |||||||||  |||| | || |||||| ||||| |||||||| |||||||||||||  | |||| |||||||||||| |||||    
T  26879632 aaaataacttaaaggatcaatctgtttcaaacttcaaacttaaaagacttatgtgtgataaaaataacttaaatgaccaatctgttacaaacctcaaact 26879731  T
Q  390 taaagga 396  Q
    |||||||    
T  26879732 taaagga 26879738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 33650531 - 33650398
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa--accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 364  Q
    |||||||||||  |||| || |||| ||||||||||||||  |||||| ||||| | |||  || |||||||||||| |||| || ||||||||||||||    
T  33650531 caaacttaaaggacttacgtgtgaccaaaataacttaaaaggaccaatatgttacataccacaaacttaaatgacttatgtgggaacaaaataacttaaa 33650432  T
Q  365 --atcaatatgttacaaaccttaaacttaaagga 396  Q
      | |||| ||||| |||||| ||||||||||||    
T  33650431 ggaccaatctgttataaacctcaaacttaaagga 33650398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 52913272 - 52913173
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgtt-ataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 364  Q
    |||||||||||  ||||||| |||||| |||||||||||  ||||||||||| | |||||| || |||||| ||||| ||||||| ||||||||||||||    
T  52913272 caaacttaaaggacttatgtgtgactagaataacttaaaggaccaatctgtttacaaacctcaaacttaaaggacttatgtgtgaccaaaataacttaaa 52913173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 6314382 - 6314297
Alignment:
Q  249 attaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaa 335  Q
    ||||||||||||||||||| |||||||||| ||||||| |||  ||||||| || || || ||||||||| |||||| || ||||||    
T  6314382 attaatctgttacaaactttaaacttaaagacttatgtgtgaaaaaaataa-tttaagacaaatctgttacaaacctcaaacttaaa 6314297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 396
Target Start/End: Complemental strand, 7490048 - 7489959
Alignment:
Q  309 caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||| |||||| || |||||| || || ||||||| ||||||||||||||  || ||| |||||||||||| ||||||||||||    
T  7490048 caatctattacaaacctcaaacttaaaggatttatgtgtgaccaaaataacttaaatgattaatctgttacaaacctcaaacttaaagga 7489959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 52913267 - 52913173
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctg-ttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| ||||  | |||||||||| |||  |||||| |||||||| ||||||||||| | ||||||| |||| |||||||||||||    
T  52913267 ttaaaggacttatgtgtgactagaataacttaaaggaccaatctgtttacaaacctcaaacttaaaggacttatgtgtgaccaaaataacttaaa 52913173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 18204930 - 18204991
Alignment:
Q  338 acttgtgtgtgatcaaaataa-cttaaaatcaatatgttacaaaccttaaacttaaaggatc 398  Q
    |||| ||||||| |||||||| || |||||||||||||||||||||| ||||||||| ||||    
T  18204930 acttatgtgtgaccaaaataatctaaaaatcaatatgttacaaacctcaaacttaaaagatc 18204991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 18608706 - 18608638
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| |||||  |||||| ||||||||||||||  |||||| |||||||||||| ||||||||||||    
T  18608706 cttaaaggacttaagtgtgaccaaaataacttaaagaatcaatctgttacaaacctcaaacttaaagga 18608638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 26879671 - 26879736
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| |||||||| ||||| ||||||||||||  ||  |||||||||||||| ||||||||||||    
T  26879671 ttaaaagacttatgtgtgataaaaataacttaaatgaccaatctgttacaaacctcaaacttaaag 26879736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 33650671 - 33650736
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| | || |||| |||||||| |||| |||||||||| ||| ||||||||||||    
T  33650671 ttaaaggacttatgtgggaacaaagtaacttaaaggatcaatctgttacgaacctcaaacttaaag 33650736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 34173385 - 34173320
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||  || | ||||||||||||| |||  |||||||||||||| ||||||||||||    
T  34173385 ttaaaggacttatttgtaaccaaaataacttaaaggaccaatctgttacaaacatcaaacttaaag 34173320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 40892569 - 40892634
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| |||||||||||||  ||| ||| |||||||||| ||||||| ||||    
T  40892569 ttaaaggacttatgtgtgaccaaaataacttaaatgatcaatatgttacaaacctcaaactcaaag 40892634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 393
Target Start/End: Original strand, 18608810 - 18608913
Alignment:
Q  293 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 389  Q
    |||||||||||||| | |||||||||| |||| | || | |||| ||||| ||||||||||||||| ||||||  |  ||| ||||| ||||||||||||    
T  18608810 aaaataacttaaaatatcaatctgttacaaacatcaaacgtaaacgacttatgtgtgatcaaaatagcttaaaggacaaatttgttataaaccttaaact 18608909  T
Q  390 taaa 393  Q
    ||||    
T  18608910 taaa 18608913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 40892512 - 40892576
Alignment:
Q  333 aaatgacttgtgtgtgatcaaaataacttaaaat-caatatgttacaaaccttaaacttaaagga 396  Q
    ||||||||| ||||||||| |||||||||||| | |||| |||||||||||| ||| ||||||||    
T  40892512 aaatgacttatgtgtgatcgaaataacttaaagtccaatctgttacaaacctcaaatttaaagga 40892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 399
Target Start/End: Original strand, 50727597 - 50727712
Alignment:
Q  288 tgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatg-acttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaacct 383  Q
    ||||||||||||||||||| || ||||||||| |||||||||  ||||| | |||| |||| ||  |||||||||||||  |  ||| ||||| ||||||    
T  50727597 tgactaaaataacttaaaagacaaatctgttacaaaccttaaatttaaaaggacttatgtgcgactaaaataacttaaatgacaaatttgttagaaacct 50727696  T
Q  384 taaacttaaaggatcc 399  Q
     |||||||||||||||    
T  50727697 caaacttaaaggatcc 50727712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 394
Target Start/End: Original strand, 18204931 - 18205045
Alignment:
Q  280 cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaa 379  Q
    ||||||| |||| |||||||  |||||| |||| ||||| |||||| || |||||| ||  | ||| |||  |||||||||||||| |||| | ||||||    
T  18204931 cttatgtgtgaccaaaataatctaaaaatcaatatgttacaaacctcaaacttaaaagatctatgtatgactaaaataacttaaaaacaatctattacaa 18205030  T
Q  380 accttaaacttaaag 394  Q
    | |||||||| ||||    
T  18205031 atcttaaactgaaag 18205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 2633366 - 2633431
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| ||||  |||||||||||| | |  ||| |||||||||| ||||||||||||    
T  2633366 ttaaaggacttatgcgtgacaaaaataacttaaagaacaaatatgttacaaacctcaaacttaaag 2633431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 33650465 - 33650400
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| |||||||| | || ||||||||||||| |||  ||||||||| |||| ||||||||||||    
T  33650465 ttaaatgacttatgtgggaacaaaataacttaaaggaccaatctgttataaacctcaaacttaaag 33650400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 33650526 - 33650401
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataactt-aatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacc 309  Q
    |||||||||||| | |||| ||||||||||| || |||  ||| ||||||| ||  |||||||||| | |||||||  ||  |||||||||||||  |||    
T  33650526 ttaaaggacttacgtgtgaccaaaataacttaaaaggaccaatatgttacataccacaaacttaaatgacttatgtgggaacaaaataacttaaaggacc 33650427  T
Q  310 aatctgttataaaccttaagcttaaa 335  Q
    |||||||||||||||| || ||||||    
T  33650426 aatctgttataaacctcaaacttaaa 33650401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 396
Target Start/End: Original strand, 33650619 - 33650738
Alignment:
Q  280 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 376  Q
    |||||||  ||| |||||||||||||  |||||||| ||| |||||  ||  ||||| ||||| |||| || |||| |||||||||  |||||| |||||    
T  33650619 cttatgtgagaccaaaataacttaaaggaccaatctcttacaaaccacaaagttaaaggacttatgtgggaacaaagtaacttaaaggatcaatctgtta 33650718  T
Q  377 caaaccttaaacttaaagga 396  Q
    | ||||| ||||||||||||    
T  33650719 cgaacctcaaacttaaagga 33650738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 52913160 - 52913065
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctg-ttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| |||| || ||||||||||  ||  |||||| |||||||| |||||||||||  |  |||||| |||| |||||||||||||    
T  52913160 ttaaaggacttatgtgtgaccagaataacttaaatgaccaatctgtttacaaacctcaaacttaaaaggatttatgtgtgaccaaaataacttaaa 52913065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 41083181 - 41083088
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| |||||||||||||||||| |||  ||| |||||||||||||||||||||| | ||||| | |||| |||||||||||||    
T  41083181 ttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaacttcaaacttaaaggacttatatgtgacaaaaataacttaaa 41083088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 45038386 - 45038510
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||| |||| ||||||||||||| |||  |||||||||||||| ||||||||||| | ||||| | |||| |||||||||||||  ||||    
T  45038386 ttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatttgtgacaaaaataacttaaatgacca 45038485  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    |||| ||| |||||| || ||||||    
T  45038486 atctattacaaacctcaaacttaaa 45038510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 2788013 - 2787950
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaa 393  Q
    |||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  2788013 cttaaatgacttatgtgtgaccaaaataacttaaaacaaatatgttacaaaccttaaacttaaa 2787950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 409
Target Start/End: Complemental strand, 41083186 - 41083041
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| |||  |||||||||||||  |||||| ||||| |||| | || |||||| ||||| | |||||  |||||||||||||     
T  41083186 caaacttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaacttcaaacttaaaggacttatatgtgacaaaaataacttaaat 41083087  T
Q  365 -atcaatatgttacaaaccttaaacttaaaggatccttagtataat 409  Q
     ||||||||||||||||||| |||||||||||| || |||||||||    
T  41083086 gatcaatatgttacaaacctcaaacttaaaggacccctagtataat 41083041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 53863449 - 53863351
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 364  Q
    |||||||||||  ||||||| ||||||||||||||||||  |||||||||||| ||| ||  | |||||||||||| ||||||||||||||||||||||    
T  53863449 caaacttaaaggacttatgtgtgactaaaataacttaaaggaccaatctgttacaaatctcgaacttaaatgacttatgtgtgatcaaaataacttaaa 53863351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 41083259 - 41083391
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| ||||  ||||||||||||| ||||||||||||  ||||| || |||||||||| | | ||||| ||||||||||||||     
T  41083259 caaacttaaaggacttatgtgtgaccgaaataacttaaaagaccaatctgttacgaacctcaaacttaaatgacatatatgtgaccaaaataacttaaag 41083358  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     | |||| |||||||||||| ||||||||||||    
T  41083359 gaccaatctgttacaaacctcaaacttaaagga 41083391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 398
Target Start/End: Original strand, 45038381 - 45038515
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| |||| |||||||||||||  |||||||||||| |||||| || |||||| ||||| | |||||  |||||||||||||     
T  45038381 caaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatttgtgacaaaaataacttaaat 45038480  T
Q  365 -atcaatatgttacaaaccttaaacttaaaggatc 398  Q
     | |||| | |||||||||| ||||||||||||||    
T  45038481 gaccaatctattacaaacctcaaacttaaaggatc 45038515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 394
Target Start/End: Original strand, 2788102 - 2788229
Alignment:
Q  270 aacttaaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--at 366  Q
    ||||||| | ||||| |||||| ||||| |||||||  | |||| | ||| ||||||||| |||||| || || ||||||| ||||||||||||||  ||    
T  2788102 aacttaaggacttatctctgaccaaaatgacttaaaggatcaattttttacaaaccttaaacttaaaggatttatgtgtgaccaaaataacttaaaatat 2788201  T
Q  367 caatatgttacaaaccttaaacttaaag 394  Q
    |||| |||||||||||| ||||||||||    
T  2788202 caatttgttacaaacctcaaacttaaag 2788229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 396
Target Start/End: Complemental strand, 7246159 - 7245992
Alignment:
Q  233 caaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagc 330  Q
    |||||| |||||| |||| |||||||||||||  | ||||||||| | ||||||| | || |||||||||||||  |||||| ||||| |||  | || |    
T  7246159 caaaattacttaaaggatcaatctgttacaaatataaaacttaaaggacttatgtgtaaccaaaataacttaaacgaccaatttgttacaaatatcaaac 7246060  T
Q  331 ttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    ||||| ||||| ||| ||| ||||||||||||||  |||||  |||||||||| | ||||||||||||    
T  7246059 ttaaaggacttatgtctgaccaaaataacttaaaggatcaacctgttacaaacgtcaaacttaaagga 7245992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 325
Target Start/End: Complemental strand, 12592297 - 12592193
Alignment:
Q  222 ttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaaaaccaatctgttata 320  Q
    ||||| |||| |||||||||||||  ||| ||||||||||||| |||||||  |||   ||||||| | || |||||||||||||||||||||||||| |    
T  12592297 ttatgtgtgaccaaaataacttaaatgatcaatctgttacaaatttcaaacacaaataacttatgtttaaccaaaataacttaaaaaccaatctgttaca 12592198  T
Q  321 aacct 325  Q
    |||||    
T  12592197 aacct 12592193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 398
Target Start/End: Original strand, 7246229 - 7246363
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 365  Q
    |||||||||||| ||||||| |||  |||||||  |||| ||||||||| ||  ||| || || |||||| ||||| ||| ||| |||||||||||||||    
T  7246229 caaacttaaagtacttatgtgtgataaaaataaactaaagaaccaatctattccaaatctcaaacttaaaggacttatgtatgaccaaaataacttaaaa 7246328  T
Q  366 t--caatatgttacaaaccttaaacttaaaggatc 398  Q
       ||||||||||||||||| ||||||||||||||    
T  7246329 gaccaatatgttacaaacctcaaacttaaaggatc 7246363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 53863528 - 53863622
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaa 305  Q
    ||||||||||||||  ||| ||||||||||||| |||  ||| |||||||| | |||||||||||  | ||||||| ||||||||||||||||||    
T  53863528 ttaaaggacttatgcatgaccaaaataacttaaaggaccaatttgttacaaccctcaaacttaaaaggacttatgtgtgactaaaataacttaaa 53863622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 365
Target Start/End: Original strand, 44057273 - 44057367
Alignment:
Q  272 cttaaagtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 365  Q
    ||||||| ||||||| ||||||||||||||||||  |||||| | ||| ||| || || |||||||||||| ||||| | |||||||||||||||    
T  44057273 cttaaagacttatgtatgactaaaataacttaaatgaccaatttattacaaatctcaaacttaaatgacttatgtgtaaccaaaataacttaaaa 44057367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 7246059 - 7245994
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||||||  ||| ||||||||||||| |||| || ||||||||||| ||||||||||||    
T  7246059 ttaaaggacttatgtctgaccaaaataacttaaaggatcaacctgttacaaacgtcaaacttaaag 7245994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 7246119 - 7246026
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| || | |||||||||||||  ||  ||| |||||||||  ||||||||||| | |||||||||||| |||||||||||||    
T  7246119 ttaaaggacttatgtgtaaccaaaataacttaaacgaccaatttgttacaaatatcaaacttaaaggacttatgtctgaccaaaataacttaaa 7246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 12498830 - 12498923
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    ||||| |||||||| |||| | |||||| |||| |||||| |||||||||||  ||||||||||| | ||||||| ||| ||||||||||||||    
T  12498830 ttaaaagacttatgtgtgaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaaggacttatgtgtgattaaaataacttaaa 12498923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 12498890 - 12498955
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| ||||| ||||||||||||  ||| ||||| |||||||| ||||||||||||    
T  12498890 ttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaag 12498955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 17232055 - 17231990
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| |||||||| ||||||||||||||||||  || | ||||||||||||| ||||||||||||    
T  17232055 ttaaaagacttatgtgtgatcaaaataacttaaaagacttatctgttacaaacctcaaacttaaag 17231990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 41083264 - 41083388
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||| |||| | |||||||||||  ||  |||||||||| ||| ||||||||||| | | ||| | |||| |||||||||||||  ||||    
T  41083264 ttaaaggacttatgtgtgaccgaaataacttaaaagaccaatctgttacgaacctcaaacttaaatgacatatatgtgaccaaaataacttaaaggacca 41083363  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    |||||||| |||||| || ||||||    
T  41083364 atctgttacaaacctcaaacttaaa 41083388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 362
Target Start/End: Complemental strand, 2788017 - 2787923
Alignment:
Q  268 caaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataactta 362  Q
    |||||||||| | ||||||| |||| |||||||||||||| | ||| ||||| ||||||||| |||||||||||| ||||  | ||||||||||||    
T  2788017 caaacttaaatgacttatgtgtgaccaaaataacttaaaa-caaatatgttacaaaccttaaacttaaatgacttatgtgcaaccaaaataactta 2787923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 396
Target Start/End: Original strand, 12498871 - 12498957
Alignment:
Q  312 tctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    ||||||| ||| || || |||||| ||||| |||||||| |||||||||||||  |||||| | |||||||||| ||||||||||||    
T  12498871 tctgttacaaatctcaaacttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaagga 12498957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 396
Target Start/End: Complemental strand, 11884707 - 11884615
Alignment:
Q  307 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa---atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||||||||| |||||| || |||||| ||||| |||||||  |||||||||||||   || ||| |||||||||||| ||| ||||||||    
T  11884707 accaatctgttacaaacctcaaacttaaaggacttatgtgtgacaaaaataacttaaaaggattaatttgttacaaacctcaaatttaaagga 11884615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 46196349 - 46196419
Alignment:
Q  234 aaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataactta 303  Q
    |||||||||||||||   |||||||||||||| ||||||||||| | ||||||| |||| |||||||||||    
T  46196349 aaaataacttaatggtccaatctgttacaaacctcaaacttaaaggacttatgtatgacaaaaataactta 46196419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 396
Target Start/End: Original strand, 2470121 - 2470245
Alignment:
Q  275 aaagtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaata 371  Q
    |||| ||||||| |||| |||||||||||||  |||||| | ||| |||||| ||  ||||| ||||| | ||||| ||||||||||||||  | ||||     
T  2470121 aaagacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaatttaaaggacttatatgtgaccaaaataacttaaaggaccaatc 2470220  T
Q  372 tgttacaaaccttaaacttaaagga 396  Q
    | |||||||||||||||| ||||||    
T  2470221 tattacaaaccttaaactgaaagga 2470245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 9999356 - 9999291
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| ||||||| || ||| ||| |||| |||||||||||||| ||| ||||||||    
T  9999356 ttaaaggacttatgtgtgatcagaacaacctaaaggataaatctgttacaaacctcagacttaaag 9999291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 40147078 - 40146986
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaa 305  Q
    |||||||||| ||| |||| ||||||||| ||| |||| ||||| |||||||| |||||||| |||  ||||||| |||| |||||||||||||    
T  40147078 ttaaaggactcatgtgtgaccaaaataacctaa-ggatcaatctattacaaacctcaaacttcaaggacttatgtgtgaccaaaataacttaaa 40146986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 40147172 - 40147301
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||  ||||  |||||||||||| || | ||| |||||||||| ||||||||||||  ||||||| |||| ||||  |||||||  ||||    
T  40147172 ttaaaggacttatatgtgagaaaaataacttaaagggtcaatttgttacaaacctcaaacttaaagaacttatgtgtgaccaaaacgacttaaatgacca 40147271  T
Q  311 atctgttataaaccttaagcttaaatgact 340  Q
    || | |||||||||| || |||||| ||||    
T  40147272 atttattataaacctcaaacttaaaggact 40147301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 50290236 - 50290183
Alignment:
Q  343 tgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaagga 396  Q
    ||||||| ||||||||||||||| |||| ||| |||||||| ||||||||||||    
T  50290236 tgtgtgaccaaaataacttaaaaccaatttgtaacaaacctcaaacttaaagga 50290183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 53863444 - 53863351
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| ||||  |||||||||||| |||  |||||||||||||  || |||||||| | ||||||| |||  |||||||||||||    
T  53863444 ttaaaggacttatgtgtgactaaaataacttaaaggaccaatctgttacaaatctcgaacttaaatgacttatgtgtgatcaaaataacttaaa 53863351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 325
Target Start/End: Complemental strand, 12498747 - 12498632
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaaa--acc 309  Q
    |||||||| ||||| |||| |||||||||||||  ||| ||| | || ||||| | |||||| |||| ||||||| |||| ||||||||||||||  |||    
T  12498747 ttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagacttatgtgtgacaaaaataacttaaaaggacc 12498648  T
Q  310 aatctgttataaacct 325  Q
    ||||| ||| ||||||    
T  12498647 aatctattacaaacct 12498632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 12592400 - 12592524
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataactt-aaaaacca 310  Q
    ||||| ||||||||  ||| ||| |||||||||  ||| ||||| |||||||||||||||||||| | || || | |||||||||||| || ||||| ||    
T  12592400 ttaaaagacttatgtatgaccaatataacttaaaagatcaatctattacaaacttcaaacttaaaggactaatatgtgactaaaataaattaaaaaatca 12592499  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    || | |||||||||| || ||||||    
T  12592500 atttattataaacctcaaacttaaa 12592524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 396
Target Start/End: Original strand, 21322016 - 21322107
Alignment:
Q  307 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||||| ||| |||||| || |||||| ||||| | ||||| ||||||||||||||  |  ||| |||||||||||| ||||||||||||    
T  21322016 accaatcttttacaaacctcaaacttaaaggacttatatgtgaccaaaataacttaaaagaaaaatgtgttacaaacctcaaacttaaagga 21322107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 24684257 - 24684321
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaag 394  Q
    |||||| ||||| |||||||   ||||||||||||| |||| |||||||||||| ||||||||||    
T  24684257 cttaaaggacttatgtgtgactgaaataacttaaaaccaatctgttacaaacctcaaacttaaag 24684321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 2470124 - 2470235
Alignment:
Q  219 gacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgt 316  Q
    |||||||| |||| ||||||||||||| |||  ||| | |||||||| ||||| ||||| | ||||| | |||| |||||||||||||  |||||||| |    
T  2470124 gacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaatttaaaggacttatatgtgaccaaaataacttaaaggaccaatctat 2470223  T
Q  317 tataaaccttaa 328  Q
    || |||||||||    
T  2470224 tacaaaccttaa 2470235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 9999407 - 9999289
Alignment:
Q  281 ttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagc-ttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttac 377  Q
    |||||| |||| || ||||||||||||||||| ||||| |||| | || | ||||| ||||| |||||||||| || ||| ||||  || ||| ||||||    
T  9999407 ttatgtgtgaccaatataacttaaaaaccaatatgttagaaacatcaaactttaaaggacttatgtgtgatcagaacaacctaaaggataaatctgttac 9999308  T
Q  378 aaaccttaaacttaaagga 396  Q
    |||||| | ||||||||||    
T  9999307 aaacctcagacttaaagga 9999289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 11884704 - 11884649
Alignment:
Q  252 aatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa 306  Q
    |||||||||||||| ||||||||||| | ||||||| |||| ||||||||||||||    
T  11884704 aatctgttacaaacctcaaacttaaaggacttatgtgtgacaaaaataacttaaaa 11884649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 396
Target Start/End: Original strand, 24684266 - 24684382
Alignment:
Q  280 cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttac 377  Q
    ||||||| ||||| ||||||||||||| ||||||||||| |||||| || ||||||  ||||  |||| ||| ||||||||||||  | |||| | |||     
T  24684266 cttatgtgtgactgaaataacttaaaa-ccaatctgttacaaacctcaaacttaaagaacttacgtgtaatc-aaataacttaaaagaccaatctattat 24684363  T
Q  378 aaaccttaaacttaaagga 396  Q
    |||||| ||||||||||||    
T  24684364 aaacctcaaacttaaagga 24684382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 11884683 - 11884617
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataactt-aatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| ||||  |||||||||| || |||||||| |||||||||| ||||| ||||||    
T  11884683 ttaaaggacttatgtgtgacaaaaataacttaaaaggattaatttgttacaaacctcaaatttaaag 11884617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 12498748 - 12498683
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaa--tcaatatgttacaaaccttaaacttaaa 393  Q
    |||||| || || ||||||| |||||||||||||||  ||||||| || |||||||||||||||||    
T  12498748 cttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaa 12498683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 40395309 - 40395367
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaa 271  Q
    |||||||||||||| ||||   ||||||||||| ||| ||||||||||||||| |||||    
T  40395309 ttaaaggacttatgtgtgacagaaataacttaaaggactaatctgttacaaacctcaaa 40395367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 41083339 - 41083389
Alignment:
Q  228 gtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||| ||||||||||||| |||  |||||||||||||| ||||||||||||    
T  41083339 gtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaag 41083389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 45038337 - 45038252
Alignment:
Q  307 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgttacaaaccttaaactt 390  Q
    |||||||||||||||| || || |||||| ||||| ||||||| | |||||||||||   | |||| ||||| |||||||||||||    
T  45038337 accaatctgttataaatctcaaacttaaaggacttatgtgtgaccgaaataacttaacggaccaatctgttataaaccttaaactt 45038252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 51950597 - 51950543
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaactt 267  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||| |||||||||    
T  51950597 ttaaaggacttatgtgtgaccaaaataacttaaaagatcaatctgctacaaactt 51950543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 2469966 - 2469901
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||| | |||| ||||||||||||| | |  ||||| |||||||| ||||||||||||    
T  2469966 ttaaaggacttaggtgtgaccaaaataacttaaagaaccaatctattacaaacctcaaacttaaag 2469901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 2788164 - 2788229
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||| ||||| |||| |||||||||||||   || ||| |||||||||| ||||||||||||    
T  2788164 ttaaaggatttatgtgtgaccaaaataacttaaaatatcaatttgttacaaacctcaaacttaaag 2788229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 7246294 - 7246359
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||||||||||||  ||| |||||||||||||  ||  ||| |||||||||| ||||||||||||    
T  7246294 ttaaaggacttatgtatgaccaaaataacttaaaagaccaatatgttacaaacctcaaacttaaag 7246359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 365
Target Start/End: Complemental strand, 12498738 - 12498653
Alignment:
Q  281 ttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 365  Q
    |||||| |||| |||||||||||||| | |||| | ||  ||||||||| |||||| ||||| |||||||  ||||||||||||||    
T  12498738 ttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagacttatgtgtgacaaaaataacttaaaa 12498653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 21322040 - 21322105
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||  |||| |||||||||||||  ||  ||| |||||||||| ||||||||||||    
T  21322040 ttaaaggacttatatgtgaccaaaataacttaaaagaaaaatgtgttacaaacctcaaacttaaag 21322105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 24369274 - 24369339
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||| | ||||  |||||||||||| |||  ||||| |||||||| ||||||||||||    
T  24369274 ttaaaggacttaggtgtgactaaaataacttaaaggacaaatctattacaaacctcaaacttaaag 24369339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 26782502 - 26782570
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaa--tcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| ||||| | |||||  ||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  26782502 cttaaaagacttatatgtgacaaaaataacttaaaaaatcaatatattacaaacctcaaacttaaagga 26782570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 40395227 - 40395159
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    |||||| || || ||||||| ||||||||||||||  |  |||||||||||||||| ||||||||||||    
T  40395227 cttaaaagatttatgtgtgaccaaaataacttaaagaactaatatgttacaaacctcaaacttaaagga 40395159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 40395226 - 40395161
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    ||||| || ||||| |||| ||||||||||||| | | |||| |||||||||| ||||||||||||    
T  40395226 ttaaaagatttatgtgtgaccaaaataacttaaagaactaatatgttacaaacctcaaacttaaag 40395161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 41083121 - 41083056
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||  ||||  ||||||||||||  ||| ||| |||||||||| ||||||||||||    
T  41083121 ttaaaggacttatatgtgacaaaaataacttaaatgatcaatatgttacaaacctcaaacttaaag 41083056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 9999500 - 9999591
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaa 305  Q
    ||||| |||||||  ||||  ||||||||||||  ||  |||||||||||||| |||||||||||  || |||| |||| |||||||||||||    
T  9999500 ttaaatgacttatatgtgacaaaaataacttaaatgaccaatctgttacaaacctcaaacttaaa-actaatgtgtgaccaaaataacttaaa 9999591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 25055948 - 25055884
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 277  Q
    |||||||| ||||| || | ||||||||||||| |||  ||||| |||||||| |||||||||||    
T  25055948 ttaaaggatttatgtgtcaccaaaataacttaaaggacaaatctattacaaacctcaaacttaaa 25055884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 340
Target Start/End: Original strand, 25056151 - 25056235
Alignment:
Q  258 ttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgact 340  Q
    |||||||| ||||||||||| | ||| ||||| || |||||||||||||| |||||| ||||| |||||| || |||||| ||||    
T  25056151 ttacaaacctcaaacttaaatgacttttgtctcaccaaaataacttaaaagaccaatttgttacaaacctcaaacttaaaagact 25056235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 25056155 - 25056230
Alignment:
Q  320 aaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 393  Q
    |||||| || |||||||||||| ||| | | ||||||||||||||  | |||| |||||||||||| |||||||||    
T  25056155 aaacctcaaacttaaatgacttttgtctcaccaaaataacttaaaagaccaatttgttacaaacctcaaacttaaa 25056230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 396
Target Start/End: Complemental strand, 45787154 - 45787023
Alignment:
Q  269 aaacttaaa-gtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaat 366  Q
    ||||||||| ||||||||| | || ||||||| |||||  | |||||||||| |||||| || | |||  ||||| ||||| | |||||||||||||||     
T  45787154 aaacttaaatgtcttatgtgtaaccaaaataagttaaatgatcaatctgttacaaacctcaaacgtaagggacttctgtgtaaccaaaataacttaaaag 45787055  T
Q  367 c--aatatgttacaaaccttaaacttaaagga 396  Q
    |  | ||||||||||| || ||||||||||||    
T  45787054 cctagtatgttacaaagctcaaacttaaagga 45787023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 50290397 - 50290472
Alignment:
Q  320 aaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 393  Q
    |||||| || ||||||  |||| ||||||| ||||||||||||||  |||||| | |||||||||| |||||||||    
T  50290397 aaacctcaaacttaaaaaacttatgtgtgaccaaaataacttaaatgatcaatttattacaaacctcaaacttaaa 50290472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 1145 - 1274
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||| |||| ||||||||| ||| |||  |||| ||||||||  ||||||||||| | ||||||| |||| |||||||||||||  ||||    
T  1145 ttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaatgacttatgtgtgaccaaaataacttaaaggacca 1244  T
Q  311 atctgttataaaccttaagcttaaatgact 340  Q
    |||||||| |||| | || |||||| ||||    
T  1245 atctgttacaaacgtcaaacttaaaggact 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 1140 - 1272
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| |||| |||||||| ||||  ||||||| |||| |||  | || |||||||||||| ||||||| ||||||||||||||     
T  1140 caaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaatgacttatgtgtgaccaaaataacttaaag 1239  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     | |||| |||||||||| | ||||||||||||    
T  1240 gaccaatctgttacaaacgtcaaacttaaagga 1272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 6)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 161536 - 161404
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| |||| ||||||| |||||  |||||||||||| ||| || || |||||| ||||| ||||||| |||||||| |||||     
T  161536 caaacttaaaggacttatgtgtgacaaaaataagttaaaggaccaatctgttacaaatctcaaacttaaaggacttatgtgtgaccaaaataagttaaag 161437  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     | |||| |||||||||||| ||||||||||||    
T  161436 gaccaatctgttacaaacctcaaacttaaagga 161404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 161675 - 161740
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| ||||||||||||| |||| ||||| |||||||| ||||||||||||    
T  161675 ttaaaggacttatgtgtgaccaaaataacttaaaggatcaatctattacaaacatcaaacttaaag 161740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 161531 - 161407
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 310  Q
    |||||||||||||| ||||  ||||||| |||| |||  |||||||||||||  ||||||||||| | ||||||| |||| ||||||| |||||  ||||    
T  161531 ttaaaggacttatgtgtgacaaaaataagttaaaggaccaatctgttacaaatctcaaacttaaaggacttatgtgtgaccaaaataagttaaaggacca 161432  T
Q  311 atctgttataaaccttaagcttaaa 335  Q
    |||||||| |||||| || ||||||    
T  161431 atctgttacaaacctcaaacttaaa 161407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 161471 - 161406
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| |||| |||||||| |||| |||  |||||||||||||| ||||||||||||    
T  161471 ttaaaggacttatgtgtgaccaaaataagttaaaggaccaatctgttacaaacctcaaacttaaag 161406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 161615 - 161708
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    |||||||||||||| |||| ||||||||| ||| |||  |||||||||||||  ||||| ||||| | ||||||| |||| |||||||||||||    
T  161615 ttaaaggacttatgtgtgaccaaaataacctaaaggaccaatctgttacaaatatcaaatttaaaggacttatgtgtgaccaaaataacttaaa 161708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 161610 - 161742
Alignment:
Q  268 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 364  Q
    |||||||||||  ||||||| |||| |||||||| ||||  |||||||||||| |||  | ||  ||||| ||||| ||||||| ||||||||||||||     
T  161610 caaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatctgttacaaatatcaaatttaaaggacttatgtgtgaccaaaataacttaaag 161709  T
Q  365 -atcaatatgttacaaaccttaaacttaaagga 396  Q
     |||||| | |||||||| | ||||||||||||    
T  161710 gatcaatctattacaaacatcaaacttaaagga 161742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000002; HSPs: 6)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 21587 - 21522
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 278  Q
    |||||||||||||| ||||| ||||||||||||  ||| ||||| |||||||| ||||||||||||    
T  21587 ttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaag 21522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 21647 - 21554
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 305  Q
    ||||| |||||||| |||| | |||||| |||| |||||| |||||||||||  ||||||||||| | ||||||| ||| ||||||||||||||    
T  21647 ttaaaagacttatgtgtgaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaaggacttatgtgtgattaaaataacttaaa 21554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 396
Target Start/End: Complemental strand, 21606 - 21520
Alignment:
Q  312 tctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 396  Q
    ||||||| ||| || || |||||| ||||| |||||||| |||||||||||||  |||||| | |||||||||| ||||||||||||    
T  21606 tctgttacaaatctcaaacttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaagga 21520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 325
Target Start/End: Original strand, 21730 - 21845
Alignment:
Q  213 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaaa--acc 309  Q
    |||||||| ||||| |||| |||||||||||||  ||| ||| | || ||||| | |||||| |||| ||||||| |||| ||||||||||||||  |||    
T  21730 ttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagacttatgtgtgacaaaaataacttaaaaggacc 21829  T
Q  310 aatctgttataaacct 325  Q
    ||||| ||| ||||||    
T  21830 aatctattacaaacct 21845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 21729 - 21794
Alignment:
Q  330 cttaaatgacttgtgtgtgatcaaaataacttaaaa--tcaatatgttacaaaccttaaacttaaa 393  Q
    |||||| || || ||||||| |||||||||||||||  ||||||| || |||||||||||||||||    
T  21729 cttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaa 21794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 365
Target Start/End: Original strand, 21739 - 21824
Alignment:
Q  281 ttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 365  Q
    |||||| |||| |||||||||||||| | |||| | ||  ||||||||| |||||| ||||| |||||||  ||||||||||||||    
T  21739 ttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagacttatgtgtgacaaaaataacttaaaa 21824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 394
Target Start/End: Original strand, 2430 - 2517
Alignment:
Q  310 aatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa---atcaatatgttacaaaccttaaacttaaag 394  Q
    ||||||||| |||||  || |||||||||||| ||||||| ||||||||||||||   | |||| | |||||||||| ||||||||||    
T  2430 aatctgttacaaaccacaaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaag 2517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 2427 - 2516
Alignment:
Q  249 attaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa--accaatctgttataaaccttaagcttaaa 335  Q
    |||||||||||||||||  |||||||||| | ||||||| |||  ||||||||||||||  |||||||| ||| |||||| || ||||||    
T  2427 attaatctgttacaaaccacaaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaa 2516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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