View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5478_low_34 (Length: 341)
Name: NF5478_low_34
Description: NF5478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5478_low_34 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 285; Significance: 1e-160; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 19 - 331
Target Start/End: Original strand, 15019763 - 15020075
Alignment:
| Q |
19 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15019763 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctttttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
15019862 |
T |
|
| Q |
119 |
ttgtttgcttaattcgatattggactgcattttctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattc |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15019863 |
ttgtttgcttaattcgatattggactgcattttctactaatccccatgaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattc |
15019962 |
T |
|
| Q |
219 |
taccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttca |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15019963 |
taccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagttattggaggaaattaagggtttagggtttaaaccttca |
15020062 |
T |
|
| Q |
319 |
acgaccgcctttg |
331 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
15020063 |
acgaccgcttttg |
15020075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 51 - 319
Target Start/End: Original strand, 14528827 - 14529095
Alignment:
| Q |
51 |
cttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatcattgtttgcttaattcgatattggactgcattt |
150 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
14528827 |
cttggagaaacaaataatccctctttttgaattattaagtaggttcttgaaaaccaacaaggatatcattctttgcttaattcgatattggactgcattt |
14528926 |
T |
|
| Q |
151 |
tctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattctaccattgctagattgcttcgaacaaggccat |
250 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| | |||| ||| ||||||| ||||||| | |
|
|
| T |
14528927 |
gctactaatccctatcaccttattgtgtctaatatcaatttgatgtctgattttggagtttctgataatgttattggtagtttgcttcagtcaaggccgt |
14529026 |
T |
|
| Q |
251 |
ctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttcaa |
319 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||| |||||| |||||||||| | ||||||| |
|
|
| T |
14529027 |
ctatatttggttcaaaggatttgattaagtcattggaggaagttaaggatttagggtttcatccttcaa |
14529095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 51 - 319
Target Start/End: Original strand, 14543053 - 14543321
Alignment:
| Q |
51 |
cttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatcattgtttgcttaattcgatattggactgcattt |
150 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
14543053 |
cttggagaaacaaataatccctctttttgaattattaagtaggttcttgaaaaccaacaaggatatcattctttgcttaattcgatattggactgcattt |
14543152 |
T |
|
| Q |
151 |
tctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattctaccattgctagattgcttcgaacaaggccat |
250 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| | |||| ||| ||||||| ||||||| | |
|
|
| T |
14543153 |
gctactaatccctatcaccttattgtgtctaatatcaatttgatgtctgattttggagtttctgataatgttattggtagtttgcttcagtcaaggccgt |
14543252 |
T |
|
| Q |
251 |
ctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttcaa |
319 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||| |||||| |||||||||| | ||||||| |
|
|
| T |
14543253 |
ctatatttggttcaaaggatttgattaagtcattggaggaagttaaggatttagggtttcatccttcaa |
14543321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 51 - 318
Target Start/End: Original strand, 14512377 - 14512644
Alignment:
| Q |
51 |
cttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatcattgtttgcttaattcgatattggactgcattt |
150 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
14512377 |
cttggagaaacaaataatccctctttttgaattattaagtaggttcttgaaaaccaacaaggatatcattctttgcttaattcgatattggactgcattt |
14512476 |
T |
|
| Q |
151 |
tctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattctaccattgctagattgcttcgaacaaggccat |
250 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| | |||| ||| ||||||| ||||||| | |
|
|
| T |
14512477 |
gctactaatccctatcaccttattgtgtctaatatcaatttgatgtctgattttggagtttctgataatgttattggtagtttgcttcagtcaaggccgt |
14512576 |
T |
|
| Q |
251 |
ctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttca |
318 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||| |||||| |||||| |||||||||| | |||||| |
|
|
| T |
14512577 |
ctatatttggttcaaaggatttgattaagtcattagaggaagttaaggatttagggtttcatccttca |
14512644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 320
Target Start/End: Original strand, 15007861 - 15008162
Alignment:
| Q |
19 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
118 |
Q |
| |
|
||||||||| |||||| |||||||| | ||||||||| | |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| |
|
|
| T |
15007861 |
ttaactgcaaaccctacaattttacgaagtagcttgggcaaacgaataatccctctttttgaattgttaagtaggttctttaaaaccaacaaggatatca |
15007960 |
T |
|
| Q |
119 |
ttgtttgcttaattcgatattggactgcattttctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattc |
218 |
Q |
| |
|
||||||||||| ||||| ||| | | ||| || || || ||||||| ||||||| |||||||||||||||| || ||||||| |||||||||| |
|
|
| T |
15007961 |
ttgtttgcttacttcgacattcaatgtcgtttattattagcccatatcaccttattgtggctaatatcaatttgataactggttttggagtttctgattc |
15008060 |
T |
|
| Q |
219 |
taccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttca |
318 |
Q |
| |
|
||||||||||| |||||||| | ||||||||||||||||||||||| |||| ||||||||||||| |||||| ||||| ||||||||||| | |||||| |
|
|
| T |
15008061 |
taccattgctaaattgcttcagaaaaggccatctatatttggttcaactgatttgattaagtcattagaggaagttaagcgtttagggtttcatccttca |
15008160 |
T |
|
| Q |
319 |
ac |
320 |
Q |
| |
|
|| |
|
|
| T |
15008161 |
ac |
15008162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 324
Target Start/End: Complemental strand, 15004172 - 15003868
Alignment:
| Q |
19 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
118 |
Q |
| |
|
|||||| || ||||| ||||||||||| |||||||||||| ||||||||||||||||||||||| |||| ||||| | |||| |||||||||||| || |
|
|
| T |
15004172 |
ttaacttcaaaccctcgaattttacaaagtagcttggagaatcgaataatccctctttttgaattgttaaataggttttcgaaa-ccaacaaggatacca |
15004074 |
T |
|
| Q |
119 |
ttgtttgcttaattcgatattggactgcattttctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattc |
218 |
Q |
| |
|
||||| ||||||||||||||| | | ||| || | ||||||||||| | | | | ||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
15004073 |
ttgttggcttaattcgatattcaagatcgtttactttttatccctatcactttctagaggctaatatcaatttgatggtggattttgatgtttctgattc |
15003974 |
T |
|
| Q |
219 |
taccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttca |
318 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||||||| ||| |||||| ||||||||||||| ||||| ||||||||||| || ||||| |
|
|
| T |
15003973 |
taccattgctagattgcttcaaaaaaggccatctatatttggttcaaaggatttgattatgtcattggaggaagttaagtgtttagggtttgacgcttca |
15003874 |
T |
|
| Q |
319 |
acgacc |
324 |
Q |
| |
|
|||||| |
|
|
| T |
15003873 |
acgacc |
15003868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 319
Target Start/End: Original strand, 14520179 - 14520479
Alignment:
| Q |
19 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
118 |
Q |
| |
|
||||||||| | |||| |||||||||| |||| ||||||| ||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||| || |
|
|
| T |
14520179 |
ttaactgcaaatcctaaaattttacaaagtagtttggagaaacgaataatccctctttttcaattgttaaataggttttcgaaaaccaacaaggatacca |
14520278 |
T |
|
| Q |
119 |
ttgtttgcttaattcgatattggactg-cattttctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgatt |
217 |
Q |
| |
|
||||||||||||||||| ||| ||| | ||| || | |||||||||| | | | | ||||||||||||||||| |||| |||||| ||||||||| |
|
|
| T |
14520279 |
ttgtttgcttaattcgaaattc-actatcgtttattatttatccctatcatgttctagaggctaatatcaatttgatgattgaatttggagtttctgatt |
14520377 |
T |
|
| Q |
218 |
ctaccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttc |
317 |
Q |
| |
|
||| ||||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||| |||||| ||||| ||||||||||| | ||||| |
|
|
| T |
14520378 |
ctaacattgctagattgcttcaaacaaggtcatctatatttggttcaactgatttgattaagtcattagaggaagttaagtgtttagggtttcatccttc |
14520477 |
T |
|
| Q |
318 |
aa |
319 |
Q |
| |
|
|| |
|
|
| T |
14520478 |
aa |
14520479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 320
Target Start/End: Original strand, 14567411 - 14567712
Alignment:
| Q |
19 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
118 |
Q |
| |
|
|||||| || |||||| |||||| || ||| ||||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||| ||||||| |
|
|
| T |
14567411 |
ttaacttcaaaccctataattttgcatattagtttggagaaacgaataatccctctttttgaattgttaagtaagttcttgaaaaccaacaaagatatca |
14567510 |
T |
|
| Q |
119 |
ttgtttgcttaattcgatattggactgcattttctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattc |
218 |
Q |
| |
|
|| ||||||||||||| ||| ||||||||||||| ||| ||||||||| |||| || |||| ||||||||||| |||||||||| |||||||| |
|
|
| T |
14567511 |
ttatttgcttaattcggcattcaactgcattttctatgaattcctatcaccttattatggataatgtcaatttgatgtctgattttggagtttctgataa |
14567610 |
T |
|
| Q |
219 |
taccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttca |
318 |
Q |
| |
|
| ||||||||| ||||||| |||||||||||||| |||||||||| || |||||||||||||||||||| ||||| ||||||||||| | |||||| |
|
|
| T |
14567611 |
tgtcattgctagtttgcttcagtcaaggccatctatagttggttcaaaggaattgattaagtcattggaggaagttaagagtttagggtttgatccttca |
14567710 |
T |
|
| Q |
319 |
ac |
320 |
Q |
| |
|
|| |
|
|
| T |
14567711 |
ac |
14567712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 29 - 321
Target Start/End: Original strand, 14547172 - 14547464
Alignment:
| Q |
29 |
accctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatcattgtttgctt |
128 |
Q |
| |
|
||||| ||||||| | | |||||||||||| |||||| |||||||||||| |||| |||||||| | ||||||||||||||||||| ||||| ||||||| |
|
|
| T |
14547172 |
accctcgaattttgcgaagtagcttggagaaacgaattatccctctttttcaattgttaagtagcttcttgaaaaccaacaaggatgtcattctttgctt |
14547271 |
T |
|
| Q |
129 |
aattcgatattggactgcattttctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattctaccattgct |
228 |
Q |
| |
|
| ||||| ||| |||| || || |||| ||||||||| | ||| ||||||||||||||||| |||||||||| ||||||||||| ||||||| |
|
|
| T |
14547272 |
acttcgacattcgacttatgttacttttaattcctatcaccttgttgccgctaatatcaatttgatgactgattttggagtttctgattctgtcattgct |
14547371 |
T |
|
| Q |
229 |
agattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttcaacg |
321 |
Q |
| |
|
|| ||||||| || ||||||||||||||||||||| | |||| |||||||||||||||||||| ||||| ||||||||||| | ||||||||| |
|
|
| T |
14547372 |
agcttgcttcaaaaaaggccatctatatttggttcgactgatttgattaagtcattggaggaagttaagtgtttagggtttgatccttcaacg |
14547464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 319
Target Start/End: Complemental strand, 14850629 - 14850329
Alignment:
| Q |
19 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
118 |
Q |
| |
|
|||||| || ||||| |||||||||| |||||| || | ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| || |
|
|
| T |
14850629 |
ttaacttcaaaccctcaaattttacaatatagcttagacaaacgaataatccctctttttgaattattaagtaggttcttgaaatccagcaaggatacca |
14850530 |
T |
|
| Q |
119 |
ttgtttgcttaattcgatattggactgcattttctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattc |
218 |
Q |
| |
|
|| | ||||||||||||| || ||||||||| ||| |||||||||| | ||||||| ||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
14850529 |
ttctctgcttaattcgatgttccactgcatttactataaatccctatcgcattattgtggctaatatcaatttgatgactgattttggagtttctgataa |
14850430 |
T |
|
| Q |
219 |
taccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttca |
318 |
Q |
| |
|
| ||||||||| |||||| || |||||||| ||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||| | |||||| |
|
|
| T |
14850429 |
tgtcattgctagtatgcttcagtcatggccatctgtatttggttcaaaggatttgattaagtcattggaggaagttaagtgtttagggtttgatccttca |
14850330 |
T |
|
| Q |
319 |
a |
319 |
Q |
| |
|
| |
|
|
| T |
14850329 |
a |
14850329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 323
Target Start/End: Original strand, 14534023 - 14534324
Alignment:
| Q |
19 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
118 |
Q |
| |
|
|||||| || ||||| ||||||||| | |||||||||||| || |||||||||||||||| ||||||||||||||| ||| |||||||||| |||| || |
|
|
| T |
14534023 |
ttaactacaaaccctcgaattttacgaagtagcttggagaaacaaataatccctctttttcaattattaagtaggtgcttaaaaaccaacagggatgcca |
14534122 |
T |
|
| Q |
119 |
ttgtttgcttaattcgatattggactgcattttctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattc |
218 |
Q |
| |
|
|| |||||||||| | |||||||| ||||| ||| | || ||||||| ||||||| ||||||||||||||||| |||||||||| || || |||| |
|
|
| T |
14534123 |
ttatttgcttaataaaacattggactacatttactatttat---tatcaccttattgtggctaatatcaatttgatgactgattttggaattcctcattc |
14534219 |
T |
|
| Q |
219 |
taccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttca |
318 |
Q |
| |
|
| ||||||||||||| ||||| | || |||| | || || ||||||| ||| ||||||| |||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
14534220 |
tgtcattgctagattgattcgatctagaccatttttaatttgttcaaaggatttgattaattcattggaggaaattaagggtttagggtttgatccttca |
14534319 |
T |
|
| Q |
319 |
acgac |
323 |
Q |
| |
|
||||| |
|
|
| T |
14534320 |
acgac |
14534324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 331
Target Start/End: Original strand, 15013271 - 15013580
Alignment:
| Q |
19 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
118 |
Q |
| |
|
||||||||| ||||| ||||||||| |||||||||| | ||| ||||||||||||||| ||||||||| ||||| ||||||||||||||||||| | |
|
|
| T |
15013271 |
ttaactgcaaaccctcacattttacaaagtagcttggacaaacggataatccctctttttcaattattaaataggtttttgaaaaccaacaaggatacta |
15013370 |
T |
|
| Q |
119 |
ttgtttgcttaattcgatattggactgcattttctaataa-tccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgatt |
217 |
Q |
| |
|
|||||| |||||||| | ||| | | ||| |||| |||| ||||| | | | | ||||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
15013371 |
ttgtttacttaattctaaattcaaggtcgttt----ataactccccttcaccttctagaggctaatatcaatttgatggttgattttggagtttgtgatt |
15013466 |
T |
|
| Q |
218 |
ctaccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttc |
317 |
Q |
| |
|
|| |||||||||||||||||||||| ||| |||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
15013467 |
ctgccattgctagattgcttcgaactaggaaatctatatattgttcaaatgatttgattaagtcattggaggacgttaagggtttagggtttgacccttc |
15013566 |
T |
|
| Q |
318 |
aacgaccgcctttg |
331 |
Q |
| |
|
|||| |||| |||| |
|
|
| T |
15013567 |
aacggccgcttttg |
15013580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 331
Target Start/End: Original strand, 31969188 - 31969500
Alignment:
| Q |
19 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
118 |
Q |
| |
|
||||||||| ||||| ||||||||| |||||||||| | ||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||| | |
|
|
| T |
31969188 |
ttaactgcaaaccctcacattttacaaagtagcttggacaaacgaataatccctctttttcaattgttaaataggttttcgaaaaccaacaaggatacta |
31969287 |
T |
|
| Q |
119 |
ttgtttgcttaattcgatattggactgcattttctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattc |
218 |
Q |
| |
|
|||||| |||||||||| ||| | | ||| | | ||||| | ||| | | | | ||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
31969288 |
ttgtttacttaattcgacattcaaggtcgtttattgtttatccccttaaccttctagaggctaatatcaatttgatggttgattttggagtttatgattc |
31969387 |
T |
|
| Q |
219 |
taccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttca |
318 |
Q |
| |
|
| |||||||||||||||||||||| ||| |||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
31969388 |
tgccattgctagattgcttcgaactaggaaatctatatcttgttcaaatgatttgattaagtcattggaggacgttaagggtttagggtttgacccttca |
31969487 |
T |
|
| Q |
319 |
acgaccgcctttg |
331 |
Q |
| |
|
|||| ||| |||| |
|
|
| T |
31969488 |
acgatcgcatttg |
31969500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 19 - 320
Target Start/End: Original strand, 15023798 - 15024099
Alignment:
| Q |
19 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
118 |
Q |
| |
|
|||||| || ||||| |||||||||| |||||| |||| |||||||||||||||||| |||| ||| |||| ||| ||||| |||||||||| | |
|
|
| T |
15023798 |
ttaactacataccctcaaattttacaaactagctttgagaatcgaataatccctctttttaaattgctaacaaggttctttaaaactaacaaggatacta |
15023897 |
T |
|
| Q |
119 |
ttgtttgcttaattcgatattggactgcattttctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattc |
218 |
Q |
| |
|
||||||||||||||| | ||| || || ||| | ||||| |||||| ||||||| ||| ||||||| |||| |||||||||| |||||||||| |
|
|
| T |
15023898 |
ttgtttgcttaattcaacattcgaaatgggttactagtcatccccatcaccttattgtggctagtatcaatctgatttctgattttggagtttctgattc |
15023997 |
T |
|
| Q |
219 |
taccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggtttaacccttca |
318 |
Q |
| |
|
| ||||||||||||||||| || | ||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||| | |||||| |
|
|
| T |
15023998 |
tgtcattgctagattgcttcaaaataagccatctatatttggttcaaaggatttgattaagtcattggaggaagttaagagtttagggtttgatccttca |
15024097 |
T |
|
| Q |
319 |
ac |
320 |
Q |
| |
|
|| |
|
|
| T |
15024098 |
ac |
15024099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 19 - 309
Target Start/End: Original strand, 14552372 - 14552662
Alignment:
| Q |
19 |
ttaactgcacaccctagaattttacaaggtagcttggagagacgaataatccctctttttgaattattaagtaggtacttgaaaaccaacaaggatatca |
118 |
Q |
| |
|
|||||| || ||||| |||||||||| ||||| |||| | |||||||||||||||||||||||| ||||| | || ||| ||||| |||||||||| | |
|
|
| T |
14552372 |
ttaacttcaaaccctcaaattttacaaagtagcctggacaaacgaataatccctctttttgaattgttaagaatgttctttaaaactaacaaggatacaa |
14552471 |
T |
|
| Q |
119 |
ttgtttgcttaattcgatattggactgcattttctaataatccctatcaccgtattgtgtctaatatcaatttgatggttgattttggattttctgattc |
218 |
Q |
| |
|
||||||||||||||||| ||| || || ||| | ||||| |||||| ||||||| ||||||| ||| ||||| ||||||||| | ||| |||| |
|
|
| T |
14552472 |
ttgtttgcttaattcgacattcgaaatgggttgctagttatccccatcaccttattgtggctaatattaatctgatgtctgattttggcgtgtctcattc |
14552571 |
T |
|
| Q |
219 |
taccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaagggtttagggttt |
309 |
Q |
| |
|
| ||||||||||||||||| || | |||||||||||| ||||||| ||| |||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
14552572 |
tgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaaggtttagggttt |
14552662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 283
Target Start/End: Complemental strand, 14847740 - 14847655
Alignment:
| Q |
198 |
tgattttggattttctgattctaccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcat |
283 |
Q |
| |
|
|||||||||| ||| ||||||||||||| ||||||||||| || |||| |||||||||||||| || || | |||||||||||| |
|
|
| T |
14847740 |
tgattttggagtttgcgattctaccattgatagattgcttcaaaaaaggtcatctatatttggtcaaactggtttgattaagtcat |
14847655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 320
Target Start/End: Original strand, 14525112 - 14525235
Alignment:
| Q |
197 |
ttgattttggattttctgattctaccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagtcattggaggaaattaa |
296 |
Q |
| |
|
|||||| |||| ||| |||||| | ||||||||||||||| ||||| ||| ||||| |||| |||| |||| | |||| | ||||||||| |||| |
|
|
| T |
14525112 |
ttgattatggagtttgtgattccgctattgctagattgcttttgacaagaccagctatacttggatcaattgatttcattagtactttggaggaagttaa |
14525211 |
T |
|
| Q |
297 |
gggtttagggtttaacccttcaac |
320 |
Q |
| |
|
||||||||||||| ||| |||||| |
|
|
| T |
14525212 |
gggtttagggtttcacctttcaac |
14525235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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