View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5481_high_5 (Length: 352)

Name: NF5481_high_5
Description: NF5481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5481_high_5
NF5481_high_5
[»] chr6 (8 HSPs)
chr6 (16-204)||(181914-182099)
chr6 (200-305)||(34177769-34177874)
chr6 (201-305)||(3095848-3095954)
chr6 (201-305)||(21542346-21542450)
chr6 (201-305)||(35129184-35129288)
chr6 (201-304)||(11082374-11082477)
chr6 (258-302)||(4987860-4987904)
chr6 (201-239)||(31107185-31107223)
[»] chr5 (33 HSPs)
chr5 (201-305)||(11262013-11262117)
chr5 (201-305)||(37562891-37562995)
chr5 (201-305)||(43590091-43590195)
chr5 (201-305)||(6686311-6686416)
chr5 (207-305)||(842699-842799)
chr5 (201-305)||(37522718-37522823)
chr5 (258-303)||(12730204-12730249)
chr5 (256-303)||(9957631-9957678)
chr5 (201-239)||(12730109-12730147)
chr5 (201-239)||(12792930-12792968)
chr5 (258-303)||(8225362-8225407)
chr5 (258-303)||(12793024-12793069)
chr5 (258-299)||(38280748-38280789)
chr5 (258-303)||(42273548-42273593)
chr5 (207-239)||(9957551-9957583)
chr5 (259-303)||(16286281-16286325)
chr5 (207-239)||(32017698-32017730)
chr5 (207-239)||(32110996-32111028)
chr5 (259-303)||(39505450-39505494)
chr5 (258-301)||(104437-104480)
chr5 (256-303)||(20643913-20643960)
chr5 (209-239)||(8225457-8225487)
chr5 (201-239)||(20644008-20644046)
chr5 (259-305)||(25840760-25840806)
chr5 (201-239)||(34425325-34425363)
chr5 (201-239)||(38280841-38280879)
chr5 (201-239)||(42273643-42273681)
chr5 (258-303)||(34425229-34425274)
chr5 (207-239)||(5984250-5984282)
chr5 (256-300)||(7071140-7071184)
chr5 (207-235)||(20039100-20039128)
chr5 (207-239)||(23233393-23233425)
chr5 (259-303)||(38130334-38130378)
[»] scaffold0045 (1 HSPs)
scaffold0045 (201-305)||(77885-77989)
[»] chr2 (22 HSPs)
chr2 (201-305)||(6110329-6110433)
chr2 (201-305)||(41528184-41528288)
chr2 (201-305)||(28599276-28599381)
chr2 (201-305)||(35517050-35517155)
chr2 (201-302)||(45085188-45085289)
chr2 (201-305)||(3201263-3201358)
chr2 (259-303)||(29524258-29524302)
chr2 (256-303)||(19263998-19264045)
chr2 (201-239)||(28858303-28858341)
chr2 (207-239)||(45660359-45660391)
chr2 (201-239)||(7645358-7645396)
chr2 (201-239)||(33198759-33198797)
chr2 (258-303)||(32010020-32010065)
chr2 (258-303)||(33198851-33198896)
chr2 (258-303)||(38070914-38070959)
chr2 (258-303)||(45660261-45660306)
chr2 (258-302)||(5280697-5280741)
chr2 (201-237)||(9864845-9864881)
chr2 (207-239)||(12938236-12938268)
chr2 (259-303)||(25571943-25571987)
chr2 (201-237)||(30830724-30830760)
chr2 (201-237)||(44454987-44455023)
[»] chr1 (38 HSPs)
chr1 (201-305)||(12449096-12449200)
chr1 (202-305)||(39555716-39555819)
chr1 (201-305)||(32624134-32624239)
chr1 (201-305)||(43667430-43667533)
chr1 (207-305)||(24190399-24190496)
chr1 (201-304)||(42965943-42966045)
chr1 (201-304)||(35691320-35691424)
chr1 (201-288)||(28120884-28120970)
chr1 (201-290)||(32983299-32983388)
chr1 (253-305)||(2125965-2126017)
chr1 (258-303)||(47026393-47026438)
chr1 (201-239)||(1820409-1820447)
chr1 (201-239)||(7468092-7468130)
chr1 (201-239)||(15959769-15959807)
chr1 (201-239)||(25391678-25391716)
chr1 (201-239)||(33369547-33369585)
chr1 (261-303)||(33431459-33431501)
chr1 (201-239)||(40718672-40718710)
chr1 (201-239)||(45226132-45226170)
chr1 (201-239)||(47600168-47600206)
chr1 (258-303)||(6786736-6786781)
chr1 (258-303)||(7468170-7468215)
chr1 (258-303)||(28016961-28017006)
chr1 (207-239)||(2246149-2246181)
chr1 (259-303)||(44149050-44149094)
chr1 (256-303)||(15959855-15959902)
chr1 (201-239)||(3875150-3875188)
chr1 (201-239)||(6785450-6785488)
chr1 (201-239)||(6786832-6786870)
chr1 (201-239)||(11241037-11241075)
chr1 (201-239)||(28016873-28016911)
chr1 (201-239)||(39932701-39932739)
chr1 (201-239)||(50012585-50012623)
chr1 (258-303)||(1820314-1820359)
chr1 (258-303)||(6787208-6787253)
chr1 (207-239)||(23392300-23392332)
chr1 (259-303)||(26907290-26907334)
chr1 (211-239)||(46542978-46543006)
[»] chr4 (31 HSPs)
chr4 (201-304)||(41414732-41414834)
chr4 (201-305)||(14332685-14332790)
chr4 (201-305)||(20281519-20281621)
chr4 (201-305)||(26916251-26916355)
chr4 (201-305)||(28669122-28669226)
chr4 (201-304)||(47867806-47867909)
chr4 (201-305)||(2229173-2229277)
chr4 (258-303)||(39078054-39078099)
chr4 (201-239)||(20716172-20716210)
chr4 (201-239)||(29203498-29203536)
chr4 (248-305)||(7654553-7654610)
chr4 (258-303)||(17186992-17187037)
chr4 (259-303)||(16605046-16605090)
chr4 (259-303)||(35529568-35529612)
chr4 (207-239)||(55580661-55580693)
chr4 (259-302)||(42915427-42915470)
chr4 (260-303)||(55580564-55580607)
chr4 (201-239)||(1585469-1585507)
chr4 (201-239)||(10069689-10069727)
chr4 (201-239)||(17794663-17794701)
chr4 (261-303)||(17799314-17799356)
chr4 (201-239)||(39078149-39078187)
chr4 (201-239)||(52535707-52535745)
chr4 (201-238)||(4058708-4058745)
chr4 (258-303)||(8013280-8013325)
chr4 (200-237)||(14583723-14583760)
chr4 (259-303)||(5222462-5222506)
chr4 (258-298)||(21181126-21181166)
chr4 (259-303)||(32012491-32012535)
chr4 (258-302)||(40411018-40411062)
chr4 (259-303)||(48793837-48793881)
[»] chr3 (38 HSPs)
chr3 (207-305)||(36546474-36546572)
chr3 (207-305)||(36561743-36561841)
chr3 (201-302)||(47864125-47864227)
chr3 (201-305)||(11054396-11054500)
chr3 (201-305)||(23910583-23910687)
chr3 (201-305)||(23311681-23311785)
chr3 (201-303)||(37042505-37042607)
chr3 (258-303)||(7866659-7866704)
chr3 (256-303)||(14752382-14752429)
chr3 (254-305)||(30189501-30189552)
chr3 (201-239)||(6075079-6075117)
chr3 (201-239)||(9264006-9264044)
chr3 (201-239)||(37074956-37074994)
chr3 (201-238)||(14752296-14752333)
chr3 (207-239)||(6438081-6438113)
chr3 (207-239)||(8703107-8703139)
chr3 (207-239)||(9054994-9055026)
chr3 (207-239)||(33974653-33974685)
chr3 (201-237)||(50651125-50651161)
chr3 (201-236)||(20847356-20847391)
chr3 (201-300)||(48802568-48802674)
chr3 (201-239)||(579226-579264)
chr3 (201-239)||(7866571-7866609)
chr3 (261-299)||(20549701-20549739)
chr3 (201-239)||(28875404-28875442)
chr3 (201-239)||(32619918-32619956)
chr3 (201-239)||(41476417-41476455)
chr3 (201-239)||(53270231-53270269)
chr3 (201-239)||(54464983-54465021)
chr3 (258-303)||(22479211-22479256)
chr3 (258-303)||(37074861-37074906)
chr3 (258-303)||(41476505-41476549)
chr3 (258-303)||(50651213-50651258)
chr3 (201-237)||(3972275-3972311)
chr3 (201-237)||(3997567-3997603)
chr3 (258-302)||(6752571-6752615)
chr3 (211-239)||(35963150-35963178)
chr3 (259-303)||(46819965-46820009)
[»] chr7 (32 HSPs)
chr7 (201-305)||(18102457-18102562)
chr7 (201-305)||(12633115-12633219)
chr7 (201-305)||(19912897-19913001)
chr7 (248-302)||(39174181-39174235)
chr7 (201-305)||(14805798-14805902)
chr7 (201-305)||(15252792-15252896)
chr7 (201-305)||(35923180-35923284)
chr7 (202-302)||(46760386-46760487)
chr7 (201-305)||(25737755-25737859)
chr7 (248-305)||(47557922-47557979)
chr7 (254-305)||(16562676-16562727)
chr7 (254-305)||(16602935-16602986)
chr7 (256-303)||(25944475-25944522)
chr7 (201-239)||(11780012-11780050)
chr7 (201-239)||(20123808-20123846)
chr7 (201-239)||(25944570-25944608)
chr7 (259-303)||(36576332-36576376)
chr7 (201-237)||(45485951-45485987)
chr7 (254-305)||(45485881-45485932)
chr7 (201-239)||(4910761-4910799)
chr7 (201-239)||(35068963-35069001)
chr7 (258-304)||(35069051-35069097)
chr7 (201-239)||(44682872-44682910)
chr7 (207-239)||(6191039-6191071)
chr7 (207-239)||(9158084-9158116)
chr7 (209-237)||(16562745-16562773)
chr7 (209-237)||(16602889-16602917)
chr7 (259-303)||(18800919-18800963)
chr7 (259-303)||(22631986-22632030)
chr7 (256-288)||(42045038-42045070)
chr7 (207-239)||(47557735-47557767)
chr7 (259-303)||(47778671-47778715)
[»] chr8 (34 HSPs)
chr8 (201-305)||(7022533-7022637)
chr8 (209-305)||(7858454-7858550)
chr8 (207-305)||(41086522-41086621)
chr8 (258-303)||(24892735-24892780)
chr8 (258-303)||(35525495-35525540)
chr8 (201-304)||(26483460-26483562)
chr8 (256-303)||(34890390-34890437)
chr8 (201-239)||(13143756-13143794)
chr8 (201-239)||(15958043-15958081)
chr8 (201-239)||(24892830-24892868)
chr8 (201-239)||(28348603-28348641)
chr8 (201-239)||(34890304-34890342)
chr8 (201-239)||(36190764-36190802)
chr8 (201-238)||(8107747-8107784)
chr8 (259-303)||(4047113-4047157)
chr8 (201-237)||(8709914-8709950)
chr8 (207-239)||(43216483-43216515)
chr8 (201-239)||(7499718-7499756)
chr8 (201-239)||(13144091-13144129)
chr8 (201-239)||(31734107-31734145)
chr8 (201-239)||(34158421-34158459)
chr8 (258-296)||(34158509-34158547)
chr8 (258-303)||(8711773-8711818)
chr8 (258-303)||(13143661-13143706)
chr8 (258-303)||(13144179-13144224)
chr8 (258-303)||(17713139-17713184)
chr8 (248-305)||(20051504-20051560)
chr8 (258-303)||(36190668-36190713)
chr8 (201-237)||(2052830-2052866)
chr8 (259-303)||(3099870-3099914)
chr8 (259-303)||(27752504-27752548)
chr8 (258-302)||(30576045-30576089)
chr8 (207-239)||(35456160-35456192)
chr8 (259-303)||(36537976-36538020)
[»] scaffold0018 (1 HSPs)
scaffold0018 (207-302)||(154792-154887)
[»] scaffold0300 (1 HSPs)
scaffold0300 (201-305)||(702-806)
[»] scaffold0442 (1 HSPs)
scaffold0442 (201-299)||(9979-10077)
[»] scaffold0774 (1 HSPs)
scaffold0774 (201-299)||(3557-3655)
[»] scaffold0132 (4 HSPs)
scaffold0132 (258-303)||(911-956)
scaffold0132 (258-303)||(8871-8916)
scaffold0132 (207-239)||(1006-1038)
scaffold0132 (207-239)||(8966-8998)
[»] scaffold0009 (1 HSPs)
scaffold0009 (259-302)||(157694-157737)
[»] scaffold0005 (1 HSPs)
scaffold0005 (200-237)||(233615-233652)
[»] scaffold1786 (1 HSPs)
scaffold1786 (207-239)||(858-890)
[»] scaffold0062 (1 HSPs)
scaffold0062 (207-239)||(44906-44938)


Alignment Details
Target: chr6 (Bit Score: 159; Significance: 1e-84; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 182099 - 181914
Alignment:
Q  16 ttatttacacctagagactcacatttgcttcaattttgtagttgcactttttcatgtgttcgaagaagttcagataagatccaaacaaacaactttaaaa 115  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  182099 ttatttacacctagagactcacatttgcttaaattttgtagttgtactttttcatgtgttcgaagaagttcagataagatccaaacaaactactttaaa- 182001  T
Q  116 ttattttgatttcttactctctcaagctgtatacacctcgagacagtttccttaaataattggtctcaattatagaattatatttaatt 204  Q
      |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  182000 --attttgatttcttactctctcaagatgtatacacctcgagacagtttccttaaataattggtctcaattatagaattatatttaatt 181914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 200 - 305
Target Start/End: Original strand, 34177769 - 34177874
Alignment:
Q  200 taattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    |||||| |||||||||||||||||||||||||||||||          ||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  34177769 taattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaaagtttgtgttttttacttatattttggtacaaagaa 34177868  T
Q  300 aatgtg 305  Q
    ||||||    
T  34177869 aatgtg 34177874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 3095848 - 3095954
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa--acnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaaga 298  Q
    ||||| |||||||||||||||||||||||||||||||  |         ||||| ||||||||||||||||||||||||  ||||||||||| |||||||    
T  3095848 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaaatcttggaaaagataaaagtttgtcttttttgcttatattttgggacaaaga 3095947  T
Q  299 aaatgtg 305  Q
    |||||||    
T  3095948 aaatgtg 3095954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 21542450 - 21542346
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||| ||||||||||||          | ||| ||||||||||||||||||||||||  ||||||||||| |||||||||    
T  21542450 aattgaatgtaatttgcatttaatattatgagaataacaaaaaaaaatattggaaaagataaaagtttgtcttttttgcttatattttgggacaaagaaa 21542351  T
Q  301 atgtg 305  Q
    |||||    
T  21542350 atgtg 21542346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 35129184 - 35129288
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||| ||||||||          ||||| ||||||||||||||||||||||||  || |||||||| |||||||||    
T  35129184 aattgaatgtaatttgcatttaattttacgagaataacaaaaaaaaatcttggaaaagataaaagtttgtcttttttgcttgtattttgggacaaagaaa 35129283  T
Q  301 atgtg 305  Q
    |||||    
T  35129284 atgtg 35129288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 11082374 - 11082477
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa-acnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| ||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||  |||||  ||||||||||| ||||||||    
T  11082374 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaatcttgaaaaagataaaagtttgt-gtttttgcttatattttggtacaaagaa 11082472  T
Q  300 aatgt 304  Q
    |||||    
T  11082473 aatgt 11082477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 4987904 - 4987860
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaat 302  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||    
T  4987904 gataaaagttagtcttttttatttataatttgggacaaagaaaat 4987860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 31107223 - 31107185
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  31107223 aattgaatgtaatttgcatttaattttataagaataaac 31107185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 11262013 - 11262117
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||    
T  11262013 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaagtttgtcttttttacttatattttgggacaaagaaa 11262112  T
Q  301 atgtg 305  Q
    |||||    
T  11262113 atgtg 11262117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 37562891 - 37562995
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||||        || || ||||||||||||||||||||||||  ||||||||||| || ||||||    
T  37562891 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcatggaaaagataaaagtttgtcttttttgcttatattttgggacgaagaaa 37562990  T
Q  301 atgtg 305  Q
    |||||    
T  37562991 atgtg 37562995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 43590091 - 43590195
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||||  ||||||||||| |||||||||    
T  43590091 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttgaaaaagataaaagtttgtattttttgcttatattttggtacaaagaaa 43590190  T
Q  301 atgtg 305  Q
    |||||    
T  43590191 atgtg 43590195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 6686416 - 6686311
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa-acnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| ||||||||||||||||||||||||||||||| |         ||||| ||||||||||||||| |||||||| |||||||||||| ||||||||    
T  6686416 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaatcttggaaaagataaaagtttatcttttttgtttatattttgggacaaagaa 6686317  T
Q  300 aatgtg 305  Q
    ||||||    
T  6686316 aatgtg 6686311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 842699 - 842799
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataa--acnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgt 304  Q
    |||||||||||||||||||||||||||||||  |         ||||| ||||||||||||||| ||||||||  ||||||||||| |||||||||||||    
T  842699 atgtaatttgcatttaattttatgagaataataaaaaaaaaaatcttggaaaagataaaagtttatcttttttgcttatattttgggacaaagaaaatgt 842798  T
Q  305 g 305  Q
    |    
T  842799 g 842799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 37522718 - 37522823
Alignment:
Q  201 aattggatgtaatttgcatttaatttt-atgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| ||||||||||||||||||||| ||||||||| ||        || || ||||||||||||||||||||||||  ||||||||||| || |||||    
T  37522718 aattgaatgtaatttgcatttaatttttatgagaatagacaaaaaaaatcatggaaaagataaaagtttgtcttttttgcttatattttgggacgaagaa 37522817  T
Q  300 aatgtg 305  Q
    ||||||    
T  37522818 aatgtg 37522823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 12730204 - 12730249
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  12730204 gataaaagtttgtcttttttacttatattttgggacaaagaaaatg 12730249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 9957631 - 9957678
Alignment:
Q  256 aagataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  9957631 aagataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 9957678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 12730109 - 12730147
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  12730109 aattgaatgtaatttgcatttaattttatgagaataaac 12730147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 12792930 - 12792968
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  12792930 aattgaatgtaatttgcatttaattttatgagaataaac 12792968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 8225407 - 8225362
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||    
T  8225407 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 8225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 12793024 - 12793069
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||||    
T  12793024 gataaaagtttgtattttttgcttatattttggaacaaagaaaatg 12793069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 38280789 - 38280748
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  38280789 gataaaagtttgtcttttttatttatattttgagacaaagaa 38280748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 42273593 - 42273548
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||    
T  42273593 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 42273548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 9957551 - 9957583
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||||    
T  9957551 atgtaatttgcatttaattttatgagaataaac 9957583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 16286281 - 16286325
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||    
T  16286281 ataaaagtttgtcttttttacttatattttgagacaaagaaaatg 16286325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 32017730 - 32017698
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||||    
T  32017730 atgtaatttgcatttaattttatgagaataaac 32017698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 32111028 - 32110996
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||||    
T  32111028 atgtaatttgcatttaattttatgagaataaac 32110996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 39505450 - 39505494
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||    
T  39505450 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 39505494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 104437 - 104480
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaa 301  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||    
T  104437 gataaaagtttgtcttttttacttatattttgggacagagaaaa 104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 20643960 - 20643913
Alignment:
Q  256 aagataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||||  ||||||||||| | ||||||||||    
T  20643960 aagataaaagtttgtcttttttgcttatattttgggataaagaaaatg 20643913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 239
Target Start/End: Complemental strand, 8225487 - 8225457
Alignment:
Q  209 gtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||    
T  8225487 gtaatttgcatttaattttatgagaataaac 8225457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 20644046 - 20644008
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  20644046 aattgaatgtaatttgcatttaatttcatgagaataaac 20644008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 25840806 - 25840760
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    ||||||||||||| |||||  ||||||||||| ||||||||||||||    
T  25840806 ataaaagtttgtcatttttgcttatattttgggacaaagaaaatgtg 25840760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 34425363 - 34425325
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  34425363 aattgaatataatttgcatttaattttatgagaataaac 34425325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 38280879 - 38280841
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  38280879 aattgaatataatttgcatttaattttatgagaataaac 38280841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 42273681 - 42273643
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  42273681 aattgaatgcaatttgcatttaattttatgagaataaac 42273643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 34425274 - 34425229
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||| | ||||||||||||    
T  34425274 gataaaagtttgtcttttttgcttatattttaggacaaagaaaatg 34425229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 5984250 - 5984282
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    ||||||||| |||||||||||||||||||||||    
T  5984250 atgtaatttacatttaattttatgagaataaac 5984282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 7071184 - 7071140
Alignment:
Q  256 aagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    |||||||||||||||||||||   ||||||||||| |||||||||    
T  7071184 aagataaaagtttgtctttttcgcttatattttggtacaaagaaa 7071140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 235
Target Start/End: Complemental strand, 20039128 - 20039100
Alignment:
Q  207 atgtaatttgcatttaattttatgagaat 235  Q
    |||||||||||||||||||||||||||||    
T  20039128 atgtaatttgcatttaattttatgagaat 20039100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 23233425 - 23233393
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||| ||||||||||||||||    
T  23233425 atgtaatttgcatttatttttatgagaataaac 23233393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 38130334 - 38130378
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||| ||| ||||||||| ||||||||||| ||||||||||||    
T  38130334 ataaaaatttatcttttttacttatattttgggacaaagaaaatg 38130378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 77989 - 77885
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| ||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  77989 aattgaatgtaatttacatttaattttatgagaataaacaaaaaaaatcttgaaaaagataaaagtttgtcttttttgcttatattttgggacaaagaaa 77890  T
Q  301 atgtg 305  Q
    |||||    
T  77889 atgtg 77885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 6110329 - 6110433
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||  ||||||||||| |||||||||    
T  6110329 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaagtttgtcttttttgcttatattttgggacaaagaaa 6110428  T
Q  301 atgtg 305  Q
    |||||    
T  6110429 atgtg 6110433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 41528288 - 41528184
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||  ||||||||||| ||||| |||    
T  41528288 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttgaaaaagataaaagtttgtcttttttgcttatattttgggacaaacaaa 41528189  T
Q  301 atgtg 305  Q
    |||||    
T  41528188 atgtg 41528184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 28599276 - 28599381
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnn-tcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| ||||||| |||||||||||||||||||||||||         ||||| ||||||||||||||||||||||||  ||||||||||| ||||||||    
T  28599276 aattgaatgtaatatgcatttaattttatgagaataaacaaaaaaaaatcttggaaaagataaaagtttgtcttttttgattatattttgggacaaagaa 28599375  T
Q  300 aatgtg 305  Q
    ||||||    
T  28599376 aatgtg 28599381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 35517155 - 35517050
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa-acnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| ||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||  ||||||||||| || |||||    
T  35517155 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaatcttgaaaaagataaaagtttgtcttttttgcttatattttggtacgaagaa 35517056  T
Q  300 aatgtg 305  Q
    ||||||    
T  35517055 aatgtg 35517050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 302
Target Start/End: Complemental strand, 45085289 - 45085188
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||||        ||||  ||||||||||||||| ||||||||  ||||||||||| |||||||||    
T  45085289 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttagaaaagataaaagtttatcttttttgcttatattttgggacaaagaaa 45085190  T
Q  301 at 302  Q
    ||    
T  45085189 at 45085188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 3201358 - 3201263
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||||             |||||||||| ||||||||||||||  ||||||||||| | |||||||    
T  3201358 aattgaatgtaatttgcatttaattttatgagaataaacaaaa---------aaaaagataatagtttgtcttttttgcttatattttgggataaagaaa 3201268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 29524258 - 29524302
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  29524258 ataaaagtttgtcttttttacttatattttgggacaaagaaaatg 29524302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 19264045 - 19263998
Alignment:
Q  256 aagataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  19264045 aagataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 19263998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 28858341 - 28858303
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  28858341 aattgaatgtaatttgcatttaattttatgagaataaac 28858303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 45660391 - 45660359
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||||    
T  45660391 atgtaatttgcatttaattttatgagaataaac 45660359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 7645358 - 7645396
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  7645358 aattgaatgtaatttgcatttaatttcatgagaataaac 7645396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 33198759 - 33198797
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  33198759 aattgaatgtaatttgcatttaattctatgagaataaac 33198797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 32010065 - 32010020
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||  ||||||||| ||||| ||||||||||||||||||    
T  32010065 gataaaagttgatcttttttacttataatttggaacaaagaaaatg 32010020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 33198851 - 33198896
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||| ||||||||||||  ||||||||||| ||||||||||||    
T  33198851 gataaaattttgtcttttttgcttatattttgggacaaagaaaatg 33198896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 38070959 - 38070914
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||| ||||| ||||||||||||    
T  38070959 gataaaagtttgtcttttttgcttataatttgggacaaagaaaatg 38070914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 45660306 - 45660261
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||| ||||||  ||||||||||| ||||||||||||    
T  45660306 gataaaagtttgttttttttgcttatattttgggacaaagaaaatg 45660261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 5280697 - 5280741
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaat 302  Q
    ||||||| ||||||||||||  ||||||||||| |||||||||||    
T  5280697 gataaaaatttgtcttttttgcttatattttgggacaaagaaaat 5280741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 9864845 - 9864881
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa 237  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  9864845 aattgaatgtaatttgcatttaatttcatgagaataa 9864881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 12938268 - 12938236
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||| ||||||||||||    
T  12938268 atgtaatttgcatttaatttcatgagaataaac 12938236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 25571987 - 25571943
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||| ||||||  ||||||||||| ||||||||||||    
T  25571987 ataaaagtttgttttttttgcttatattttgggacaaagaaaatg 25571943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 30830724 - 30830760
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa 237  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  30830724 aattgtatgtaatttgcatttaatttcatgagaataa 30830760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 44455023 - 44454987
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa 237  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  44455023 aattgaatgtaatttgcatttaatttcatgagaataa 44454987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 12449096 - 12449200
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||  ||||||||||| |||||||||    
T  12449096 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaagtttgtcttttttgcttatattttgggacaaagaaa 12449195  T
Q  301 atgtg 305  Q
    |||||    
T  12449196 atgtg 12449200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 39555716 - 39555819
Alignment:
Q  202 attggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaa 301  Q
    |||| |||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  39555716 attgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaagtttgtcttttttgcttatattttgggacaaagaaaa 39555815  T
Q  302 tgtg 305  Q
    ||||    
T  39555816 tgtg 39555819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 32624134 - 32624239
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnn-tcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| |||||||||||||||||||||||||||||||||         ||||| ||||||||||||||||||||||||  ||||||||||| ||||||||    
T  32624134 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaaatcttggaaaagataaaagtttgtcttttttgcttatattttgggacaaagaa 32624233  T
Q  300 aatgtg 305  Q
    ||||||    
T  32624234 aatgtg 32624239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 43667430 - 43667533
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| ||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||||||||||  ||||||||||  |||||||||    
T  43667430 aattgaatgtaatttacatttaattttatgagaataaacaaaaaaa-tcttgaaaaagataaaagtttgtcttttttgcttatattttgagacaaagaaa 43667528  T
Q  301 atgtg 305  Q
    |||||    
T  43667529 atgtg 43667533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 24190496 - 24190399
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    |||||||||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  24190496 atgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaaagtttgtctttttt-cttatattttggtacaaagaaaatgtg 24190399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 42965943 - 42966045
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| ||||||||||||||||||||||| |||||||||        |||||||||| |||||||||||||||||||| || |||||||| ||||| |||    
T  42965943 aattgaatgtaatttgcatttaattttataagaataaacaaaaaaa-tcttgaaaaaaataaaagtttgtcttttttacttgtattttgggacaaataaa 42966041  T
Q  301 atgt 304  Q
    ||||    
T  42966042 atgt 42966045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 35691424 - 35691320
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa-acnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| ||||||||||||||||||||||||||||||| |         ||||||||||||||||| ||| | ||||||| ||||||||||| ||||||||    
T  35691424 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaatcttgaaaaagataaaaatttattttttttacttatattttggtacaaagaa 35691325  T
Q  300 aatgt 304  Q
    |||||    
T  35691324 aatgt 35691320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 28120884 - 28120970
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatatttt 288  Q
    ||||| |||||||||||||||||||||||| ||||||||        ||||| ||||||||||||||||||||||||| |||||||||    
T  28120884 aattgaatgtaatttgcatttaattttatgtgaataaacaaaagaaatcttg-aaaagataaaagtttgtcttttttacttatatttt 28120970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 32983299 - 32983388
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttgg 290  Q
    ||||| || ||||||||||||||||||||||||||||||        |||| |||||||||||| ||||||||||||  |||||||||||    
T  32983299 aattgaatataatttgcatttaattttatgagaataaacaaaaaaattcttaaaaaagataaaaatttgtcttttttgcttatattttgg 32983388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 2126017 - 2125965
Alignment:
Q  253 aaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  2126017 aaaaagataaaagtttgtcttttttacttatattttaggacaaagaaaatgtg 2125965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 47026438 - 47026393
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  47026438 gataaaagtttgtcttttttacttatattttagaacaaagaaaatg 47026393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 1820447 - 1820409
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  1820447 aattgaatgtaatttgcatttaattttatgagaataaac 1820409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 7468092 - 7468130
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  7468092 aattgaatgtaatttgcatttaattttatgagaataaac 7468130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 15959769 - 15959807
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  15959769 aattgaatgtaatttgcatttaattttatgagaataaac 15959807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 25391716 - 25391678
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  25391716 aattgaatgtaatttgcatttaattttatgagaataaac 25391678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 33369585 - 33369547
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  33369585 aattgaatgtaatttgcatttaattttatgagaataaac 33369547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 303
Target Start/End: Complemental strand, 33431501 - 33431459
Alignment:
Q  261 aaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  33431501 aaaattttgtcttttttacttatattttggaacaaagaaaatg 33431459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 40718710 - 40718672
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  40718710 aattgaatgtaatttgcatttaattttatgagaataaac 40718672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 45226170 - 45226132
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  45226170 aattgaatgtaatttgcatttaattttatgagaataaac 45226132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 47600168 - 47600206
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  47600168 aattgaatgtaatttgcatttaattttatgagaataaac 47600206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 6786781 - 6786736
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||    
T  6786781 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 6786736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 7468170 - 7468215
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||    
T  7468170 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 7468215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 28016961 - 28017006
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||    
T  28016961 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 28017006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 2246149 - 2246181
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||||    
T  2246149 atgtaatttgcatttaattttatgagaataaac 2246181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 44149050 - 44149094
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||    
T  44149050 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 44149094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 15959855 - 15959902
Alignment:
Q  256 aagataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||| ||||||||||||  ||||||||||| ||||||||||||    
T  15959855 aagataaaaatttgtcttttttgcttatattttgggacaaagaaaatg 15959902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 3875150 - 3875188
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  3875150 aattgaatgaaatttgcatttaattttatgagaataaac 3875188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 6785488 - 6785450
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  6785488 aattgaatgtagtttgcatttaattttatgagaataaac 6785450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 6786870 - 6786832
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  6786870 aattgaatgtagtttgcatttaattttatgagaataaac 6786832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 11241075 - 11241037
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  11241075 aattgaatgtaatttacatttaattttatgagaataaac 11241037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 28016873 - 28016911
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  28016873 aattgaatgtaacttgcatttaattttatgagaataaac 28016911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 39932701 - 39932739
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  39932701 aattgaatgtaatttgtatttaattttatgagaataaac 39932739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 50012623 - 50012585
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  50012623 aattgaatgtaatttgcatttaattttataagaataaac 50012585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 1820359 - 1820314
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||| ||||||||| | | ||||||||||    
T  1820359 gataaaagtttgtcttttttacttatattttaggataaagaaaatg 1820314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 6787208 - 6787253
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||||| | ||||||||||    
T  6787208 gataaaagtttgtcttttttgcttatattttgggataaagaaaatg 6787253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 23392300 - 23392332
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||| ||||||||||||    
T  23392300 atgtaatttgcatttaatttcatgagaataaac 23392332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 26907290 - 26907334
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||    
T  26907290 ataaaagttggtcttttttacttatattttgagacaaagaaaatg 26907334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 239
Target Start/End: Complemental strand, 46543006 - 46542978
Alignment:
Q  211 aatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||    
T  46543006 aatttgcatttaattttatgagaataaac 46542978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 41414732 - 41414834
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  41414732 aattgaatgtaatttgcatttaattttataagaataaacaaaaaaa-tcttgaaaaagataaaagtttgtcttttttacttatattttgggacaaagaaa 41414830  T
Q  301 atgt 304  Q
    ||||    
T  41414831 atgt 41414834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 14332790 - 14332685
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnn-tcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| |||||||||||||||||||||||||||||||||         ||||| ||||||||||||||||||||||||  ||||||||||| ||||||||    
T  14332790 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaaatcttggaaaagataaaagtttgtcttttttgcttatattttgggacaaagaa 14332691  T
Q  300 aatgtg 305  Q
    ||||||    
T  14332690 aatgtg 14332685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 20281621 - 20281519
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||||        ||||| |||||||||||||  |||||||||  |||||||||||||||||||||    
T  20281621 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaagt--gtcttttttgcttatattttggaacaaagaaa 20281524  T
Q  301 atgtg 305  Q
    |||||    
T  20281523 atgtg 20281519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 26916355 - 26916251
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||||        ||||||||| ||||||||||| ||||||||  ||||||||||  |||||||||    
T  26916355 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttgaaaaggataaaagtttatcttttttgcttatattttgagacaaagaaa 26916256  T
Q  301 atgtg 305  Q
    |||||    
T  26916255 atgtg 26916251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 28669122 - 28669226
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||| ||||||||||||||||||||||        ||||||||||||||||| |||||| |||||  ||||||||||| |||||||||    
T  28669122 aattgaatgtaatttgtatttaattttatgagaataaacaaaaaaaatcttgaaaaagataaaaatttgtcctttttgcttatattttgggacaaagaaa 28669221  T
Q  301 atgtg 305  Q
    |||||    
T  28669222 atgtg 28669226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 47867909 - 47867806
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||||||  ||||||||||| |||||||||    
T  47867909 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttgaaaaagataaaagtttttcttttttgcttatattttgggacaaagaaa 47867810  T
Q  301 atgt 304  Q
    ||||    
T  47867809 atgt 47867806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 2229277 - 2229173
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||| ||||||||||||          | ||| ||||||||||||||||||||||||  ||||||||||| |||||||||    
T  2229277 aattgaatgtaatttgcatttaatattatgagaataacaaaaaaaaatattggaaaagataaaagtttgtcttttttgcttatattttgggacaaagaaa 2229178  T
Q  301 atgtg 305  Q
    |||||    
T  2229177 atgtg 2229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 39078099 - 39078054
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  39078099 gataaaagtttgtcttttttacttatattttgggacaaagaaaatg 39078054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 20716210 - 20716172
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  20716210 aattgaatgtaatttgcatttaattttatgagaataaac 20716172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 29203536 - 29203498
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  29203536 aattgaatgtaatttgcatttaattttatgagaataaac 29203498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 7654610 - 7654553
Alignment:
Q  248 tcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    ||||| ||||||||||||||||||||||||  ||||||||| | | ||||||||||||    
T  7654610 tcttggaaaagataaaagtttgtcttttttgcttatattttaggataaagaaaatgtg 7654553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 17186992 - 17187037
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||    
T  17186992 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 17187037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 16605046 - 16605090
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||    
T  16605046 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 16605090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 35529612 - 35529568
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||    
T  35529612 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 35529568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 55580693 - 55580661
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||||    
T  55580693 atgtaatttgcatttaattttatgagaataaac 55580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 42915470 - 42915427
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaat 302  Q
    |||||||||||||||||||  ||||||||||| |||||||||||    
T  42915470 ataaaagtttgtcttttttgcttatattttgggacaaagaaaat 42915427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 303
Target Start/End: Complemental strand, 55580607 - 55580564
Alignment:
Q  260 taaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||    
T  55580607 taaaagtttgtcttttttgcttatattttgggacaaagaaaatg 55580564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 1585469 - 1585507
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  1585469 aattgaatgtaattttcatttaattttatgagaataaac 1585507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 10069727 - 10069689
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  10069727 aattgaatgttatttgcatttaattttatgagaataaac 10069689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 17794663 - 17794701
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  17794663 aattgaatgtaatttacatttaattttatgagaataaac 17794701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 303
Target Start/End: Original strand, 17799314 - 17799356
Alignment:
Q  261 aaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||    
T  17799314 aaaagtttgtcttttttgtttataatttggaacaaataaaatg 17799356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 39078187 - 39078149
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  39078187 aattgaatgtaatgtgcatttaattttatgagaataaac 39078149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 52535707 - 52535745
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  52535707 aattgaatataatttgcatttaattttatgagaataaac 52535745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 4058745 - 4058708
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaa 238  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  4058745 aattgaatgaaatttgcatttaattttatgagaataaa 4058708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 8013280 - 8013325
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||| |||||||||| ||||| ||||| ||||||||||||    
T  8013280 gataaaagttggtcttttttacttataatttgggacaaagaaaatg 8013325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 14583760 - 14583723
Alignment:
Q  200 taattggatgtaatttgcatttaattttatgagaataa 237  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  14583760 taattgaatgtaatttgcatttaatttcatgagaataa 14583723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 5222462 - 5222506
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||| |||||||||| ||||||||| | ||||||||||||    
T  5222462 ataaaagttggtcttttttacttatattttaggacaaagaaaatg 5222506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 21181126 - 21181166
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaaga 298  Q
    ||||||| ||||||||||||||||||| ||||| |||||||    
T  21181126 gataaaaatttgtcttttttatttataatttgggacaaaga 21181166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 32012491 - 32012535
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||||||||||  ||||||||||  ||||||||||||    
T  32012491 ataaaagtttgtcttttttgcttatattttgagacaaagaaaatg 32012535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 40411062 - 40411018
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaat 302  Q
    |||||||||| || |||||| |||||| |||||||||||||||||    
T  40411062 gataaaagttggttttttttgtttataatttggaacaaagaaaat 40411018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 48793837 - 48793881
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||| |  ||||||||||| ||||||||||||    
T  48793837 ataaaagtttgtcttttatgcttatattttgggacaaagaaaatg 48793881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 36546572 - 36546474
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    |||||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||    
T  36546572 atgtaatttgcatttaattttatgagaataaacaaaaagaatcttgaaaaagacaaaagtttgtcttttttgcttatattttgggacaaagaaaatgtg 36546474  T

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Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 36561743 - 36561841
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    |||||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||    
T  36561743 atgtaatttgcatttaattttatgagaataaacaaaaagaatcttgaaaaagacaaaagtttgtcttttttgcttatattttgggacaaagaaaatgtg 36561841  T

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Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 201 - 302
Target Start/End: Complemental strand, 47864227 - 47864125
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnn-tcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| |||||||||||||||||||||||||||||||||         |||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  47864227 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaaatcttgaaaaagatagaagtttgtcttttttatttatattttgggacaaagaa 47864128  T
Q  300 aat 302  Q
    |||    
T  47864127 aat 47864125  T

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Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 11054396 - 11054500
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||  ||||||||||| |||||||||    
T  11054396 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaaagtttgtcttttttgcttatattttgggacaaagaaa 11054495  T
Q  301 atgtg 305  Q
    |||||    
T  11054496 atgtg 11054500  T

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Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 23910583 - 23910687
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| ||||||||||||||||||| |||||||||||||        ||||||||||||||||| ||||||||||||  ||||||||||| ||||| |||    
T  23910583 aattgaatgtaatttgcatttaattatatgagaataaacaaaaaaaatcttgaaaaagataaaaatttgtcttttttgcttatattttgggacaaaaaaa 23910682  T
Q  301 atgtg 305  Q
    |||||    
T  23910683 atgtg 23910687  T

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Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 23311681 - 23311785
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| ||||||| | |||||||||||||||||||||          |||||||||||||||||||||| |||||||  ||||||||||| |||||||||    
T  23311681 aattgaatgtaatatacatttaattttatgagaataacaaaaaaaaatcttgaaaaagataaaagtttgacttttttgcttatattttgggacaaagaaa 23311780  T
Q  301 atgtg 305  Q
    |||||    
T  23311781 atgtg 23311785  T

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Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 303
Target Start/End: Original strand, 37042505 - 37042607
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||          ||||| ||||||| ||| ||||||||||||  ||||||||||| |||||||||    
T  37042505 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagattaaaatttgtcttttttccttatattttgggacaaagaaa 37042604  T
Q  301 atg 303  Q
    |||    
T  37042605 atg 37042607  T

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Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 7866659 - 7866704
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||    
T  7866659 gataaaagtttgtcttttttgtttatattttgggacaaagaaaatg 7866704  T

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Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 14752382 - 14752429
Alignment:
Q  256 aagataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  14752382 aagataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 14752429  T

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Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 30189552 - 30189501
Alignment:
Q  254 aaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    ||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||    
T  30189552 aaaagataaaaatttatcttttttattaatattttgggacaaagaaaatgtg 30189501  T

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Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 6075117 - 6075079
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  6075117 aattgaatgtaatttgcatttaattttatgagaataaac 6075079  T

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Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 9264044 - 9264006
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  9264044 aattagatgtaatttgcatttaattttatgagaataaac 9264006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 37074994 - 37074956
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  37074994 aattgaatgtaatttgcatttaattttatgagaataaac 37074956  T

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Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 14752296 - 14752333
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaa 238  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  14752296 aattgaatgtaatttgcatttaattttatgagaataaa 14752333  T

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Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 6438113 - 6438081
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||||    
T  6438113 atgtaatttgcatttaattttatgagaataaac 6438081  T

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Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 8703139 - 8703107
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||||    
T  8703139 atgtaatttgcatttaattttatgagaataaac 8703107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 9055026 - 9054994
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||||    
T  9055026 atgtaatttgcatttaattttatgagaataaac 9054994  T

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Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 33974653 - 33974685
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||||    
T  33974653 atgtaatttgcatttaattttatgagaataaac 33974685  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 50651125 - 50651161
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa 237  Q
    ||||| |||||||||||||||||||||||||||||||    
T  50651125 aattgaatgtaatttgcatttaattttatgagaataa 50651161  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 20847356 - 20847391
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaata 236  Q
    ||||| ||||||||||||||||||||||||||||||    
T  20847356 aattgaatgtaatttgcatttaattttatgagaata 20847391  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 48802568 - 48802674
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac---nnnnnnnntcttgaaaaagataaaagtttgtcttttttat----ttatattttggaac 293  Q
    ||||| |||||||||||||||| ||||||||||||||||           ||||||||||||||||||||||| |||||| |    ||||||||||| ||    
T  48802568 aattgaatgtaatttgcatttacttttatgagaataaacaaaaaaaaaaatcttgaaaaagataaaagtttgttttttttttcttcttatattttgggac 48802667  T
Q  294 aaagaaa 300  Q
    |||||||    
T  48802668 aaagaaa 48802674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 579226 - 579264
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  579226 aattgaatgtaatttgcatttaattttatgagattaaac 579264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 7866571 - 7866609
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  7866571 aattgaatgtaattttcatttaattttatgagaataaac 7866609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 20549739 - 20549701
Alignment:
Q  261 aaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  20549739 aaaagtttatcttttttatttatattttggaataaagaa 20549701  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 28875442 - 28875404
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  28875442 aattgaatgtaatttgtatttaattttatgagaataaac 28875404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 32619918 - 32619956
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  32619918 aattgaatgtaatttgcatttaattttattagaataaac 32619956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 41476417 - 41476455
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  41476417 aattgaatctaatttgcatttaattttatgagaataaac 41476455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 53270269 - 53270231
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  53270269 aattgaatgtaatttgtatttaattttatgagaataaac 53270231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 54464983 - 54465021
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  54464983 aattgaatgtaatttgcgtttaattttatgagaataaac 54465021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 22479211 - 22479256
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||| ||||| ||||||||||||    
T  22479211 gataaaagtttgtcttttttgcttataatttgggacaaagaaaatg 22479256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 37074906 - 37074861
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  |||||||| || ||||||||||||    
T  37074906 gataaaagtttgtcttttttgcttatatttcgggacaaagaaaatg 37074861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 41476505 - 41476549
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  41476505 gataaaagtttgtctttttta-ttatattttgggacaaacaaaatg 41476549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 50651213 - 50651258
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||| ||||||||  |||||| |||||||||||||||||    
T  50651213 gataaaagtttatcttttttgcttatatattggaacaaagaaaatg 50651258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 3972311 - 3972275
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa 237  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  3972311 aattgaatgtaatttgcatttaatttcatgagaataa 3972275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 3997567 - 3997603
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa 237  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  3997567 aattgaatgtaatttgcatttaatttcatgagaataa 3997603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 6752615 - 6752571
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaat 302  Q
    ||||||||||||||||||||| ||| ||||| | |||||||||||    
T  6752615 gataaaagtttgtcttttttacttaaattttaggacaaagaaaat 6752571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 239
Target Start/End: Complemental strand, 35963178 - 35963150
Alignment:
Q  211 aatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||    
T  35963178 aatttgcatttaattttatgagaataaac 35963150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 46820009 - 46819965
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||  ||||||||||||||||||||  ||||||||||||    
T  46820009 ataaaagttgatcttttttatttatattttgagacaaagaaaatg 46819965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 18102562 - 18102457
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnn-tcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| |||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  18102562 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaaatcttgaaaaagataaaagtttgtcttttttgcttatattttgggacaaagaa 18102463  T
Q  300 aatgtg 305  Q
    ||||||    
T  18102462 aatgtg 18102457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 12633115 - 12633219
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||| ||||  ||||||||||| ||||| |||    
T  12633115 aattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaagtttgtctattttgattatattttgggacaaaaaaa 12633214  T
Q  301 atgtg 305  Q
    |||||    
T  12633215 atgtg 12633219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 19912897 - 19913001
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||| ||||||||||          ||||| ||||||||||||||||||||||||||||||||||||| | |||||||    
T  19912897 aattgaatgtaatttgcatttaatttcatgagaataacaaaaaaaaatcttggaaaagataaaagtttgtcttttttatttatattttgggataaagaaa 19912996  T
Q  301 atgtg 305  Q
    |||||    
T  19912997 atgtg 19913001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 39174235 - 39174181
Alignment:
Q  248 tcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaat 302  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39174235 tcttgaaaaagataaaagtttgtcttttttacttatattttggaacaaagaaaat 39174181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 14805902 - 14805798
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||          ||||| ||||||||||||||||||| ||||  ||||||||||| |||||||||    
T  14805902 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaaagtttgtctgttttgcttatattttgggacaaagaaa 14805803  T
Q  301 atgtg 305  Q
    |||||    
T  14805802 atgtg 14805798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 15252896 - 15252792
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||          ||||| ||||||||||||||||||| ||||  ||||||||||| |||||||||    
T  15252896 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaaagtttgtctgttttgcttatattttgggacaaagaaa 15252797  T
Q  301 atgtg 305  Q
    |||||    
T  15252796 atgtg 15252792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 35923284 - 35923180
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||          | ||||||||||||||||||| ||||||||  ||||||||||| |||||||||    
T  35923284 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatattgaaaaagataaaagtttatctttttttattatattttgggacaaagaaa 35923185  T
Q  301 atgtg 305  Q
    |||||    
T  35923184 atgtg 35923180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 46760386 - 46760487
Alignment:
Q  202 attggatgtaatttgcatttaattttatgagaataa-acnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    |||| ||||||||||||||||||||||||||||||| |         | |||||||| |||||||||||||||||||| ||||||||||| |||||||||    
T  46760386 attgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaatattgaaaaaaataaaagtttgtcttttttacttatattttgggacaaagaaa 46760485  T
Q  301 at 302  Q
    ||    
T  46760486 at 46760487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 25737755 - 25737859
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||          ||||| ||||||||||||||| | ||||||  ||||||||||| |||||||||    
T  25737755 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaaagttttttttttttgcttatattttgggacaaagaaa 25737854  T
Q  301 atgtg 305  Q
    |||||    
T  25737855 atgtg 25737859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 47557922 - 47557979
Alignment:
Q  248 tcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    |||||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||    
T  47557922 tcttgaaaaacataaaagtttgtcttttttgcttatattttgggacaaagaaaatgtg 47557979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 16562727 - 16562676
Alignment:
Q  254 aaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  16562727 aaaagataaaaatttgtcttttttacttatattttgggacaaagaaaatgtg 16562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 305
Target Start/End: Original strand, 16602935 - 16602986
Alignment:
Q  254 aaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  16602935 aaaagataaaaatttgtcttttttacttatattttgggacaaagaaaatgtg 16602986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 25944522 - 25944475
Alignment:
Q  256 aagataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  25944522 aagataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 25944475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 11780050 - 11780012
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  11780050 aatttgatgtaatttgcatttaattttatgagaataaac 11780012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 20123808 - 20123846
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  20123808 aattgaatgtaatttgcatttaattttatgagaataaac 20123846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 25944608 - 25944570
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  25944608 aattgaatgtaatttgcatttaattttatgagaataaac 25944570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 36576376 - 36576332
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||    
T  36576376 ataaaagtttgtcttttttacttatattttgagacaaagaaaatg 36576332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 45485987 - 45485951
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa 237  Q
    ||||| |||||||||||||||||||||||||||||||    
T  45485987 aattgaatgtaatttgcatttaattttatgagaataa 45485951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 45485932 - 45485881
Alignment:
Q  254 aaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    ||||||||||| ||||||||||||  ||||||||| | ||||||||||||||    
T  45485932 aaaagataaaattttgtcttttttgcttatatttttggacaaagaaaatgtg 45485881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 4910761 - 4910799
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  4910761 aattgaatgtaatttgcatttaattttatgagcataaac 4910799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 35068963 - 35069001
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  35068963 aattgaatgtaatttgcatttaatattatgagaataaac 35069001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 35069051 - 35069097
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatgt 304  Q
    |||||||||||||| |||||| ||||||||||| ||||| |||||||    
T  35069051 gataaaagtttgtcatttttacttatattttgggacaaaaaaaatgt 35069097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 44682910 - 44682872
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  44682910 aattggatgtaatttgcaattaatttcatgagaataaac 44682872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 6191071 - 6191039
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    ||||||||| |||||||||||||||||||||||    
T  6191071 atgtaattttcatttaattttatgagaataaac 6191039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 9158116 - 9158084
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    ||||||||||||||||||||||| |||||||||    
T  9158116 atgtaatttgcatttaattttataagaataaac 9158084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 237
Target Start/End: Complemental strand, 16562773 - 16562745
Alignment:
Q  209 gtaatttgcatttaattttatgagaataa 237  Q
    |||||||||||||||||||||||||||||    
T  16562773 gtaatttgcatttaattttatgagaataa 16562745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 16602889 - 16602917
Alignment:
Q  209 gtaatttgcatttaattttatgagaataa 237  Q
    |||||||||||||||||||||||||||||    
T  16602889 gtaatttgcatttaattttatgagaataa 16602917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 18800919 - 18800963
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||| ||||||||||  ||||||||||| ||||||||||||    
T  18800919 ataaaagtatgtcttttttgcttatattttgggacaaagaaaatg 18800963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 22632030 - 22631986
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||| |||||  ||||||||| ||||||||||||||    
T  22632030 ataaaagtttgtcctttttgcttatattttagaacaaagaaaatg 22631986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 42045038 - 42045070
Alignment:
Q  256 aagataaaagtttgtcttttttatttatatttt 288  Q
    ||||||||| |||||||||||||||||||||||    
T  42045038 aagataaaaatttgtcttttttatttatatttt 42045070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 47557735 - 47557767
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    ||||||||||||||||||| |||||||||||||    
T  47557735 atgtaatttgcatttaattctatgagaataaac 47557767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 47778715 - 47778671
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||| ||||||||||||  ||||||||||| ||||||||||||    
T  47778715 ataaaaatttgtcttttttgcttatattttgggacaaagaaaatg 47778671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 9e-24; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 7022533 - 7022637
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  7022533 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttgaaaaagataaaagtttgtcttttttgcttatattttgggacaaagaaa 7022632  T
Q  301 atgtg 305  Q
    |||||    
T  7022633 atgtg 7022637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 209 - 305
Target Start/End: Complemental strand, 7858550 - 7858454
Alignment:
Q  209 gtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    |||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  7858550 gtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaagtttgtcttttttgcttatattttgggacaaagaaaatgtg 7858454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 41086522 - 41086621
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtc-ttttttatttatattttggaacaaagaaaatgtg 305  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||    
T  41086522 atgtaatttgcatttaattttatgagaataaacaaaaaaaatcttgaaaaagataaaagtttgtctttttttgcttatattttgggacaaagaaaatgtg 41086621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 24892780 - 24892735
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  24892780 gataaaagtttgtcttttttgcttatattttggaacaaagaaaatg 24892735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 35525540 - 35525495
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  35525540 gataaaagtttgtcttttttacttatattttgggacaaagaaaatg 35525495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 26483562 - 26483460
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| ||||||||| |||||||||||| ||||||||          |||||||||| |||||||||||| ||||||  ||||||||||| |||||||||    
T  26483562 aattgaatgtaatttacatttaattttacgagaataacaaaaaaaaatcttgaaaaaaataaaagtttgtgtttttt-cttatattttggtacaaagaaa 26483464  T
Q  301 atgt 304  Q
    ||||    
T  26483463 atgt 26483460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 34890390 - 34890437
Alignment:
Q  256 aagataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  34890390 aagataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 34890437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 13143794 - 13143756
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  13143794 aattgaatgtaatttgcatttaattttatgagaataaac 13143756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 15958043 - 15958081
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  15958043 aattgaatgtaatttgcatttaattttatgagaataaac 15958081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 24892868 - 24892830
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  24892868 aattgaatgtaatttgcatttaattttatgagaataaac 24892830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 28348641 - 28348603
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  28348641 aattgaatgtaatttgcatttaattttatgagaataaac 28348603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 34890304 - 34890342
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  34890304 aattgaatgtaatttgcatttaattttatgagaataaac 34890342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 36190802 - 36190764
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  36190802 aattgaatgtaatttgcatttaattttatgagaataaac 36190764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 8107747 - 8107784
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaa 238  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  8107747 aattgaatgtaatttgcatttaattttatgagaataaa 8107784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 4047113 - 4047157
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||    
T  4047113 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 4047157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 8709914 - 8709950
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa 237  Q
    ||||| |||||||||||||||||||||||||||||||    
T  8709914 aattgaatgtaatttgcatttaattttatgagaataa 8709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 43216483 - 43216515
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||||||||||||||    
T  43216483 atgtaatttgcatttaattttatgagaataaac 43216515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 7499756 - 7499718
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  7499756 aattgaatgtaatttacatttaattttatgagaataaac 7499718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 13144091 - 13144129
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  13144091 aattgaatgtaatttgcatttaattttatgaaaataaac 13144129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 31734145 - 31734107
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  31734145 aattgaatgtaatttgcatttaatttgatgagaataaac 31734107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 34158421 - 34158459
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaac 239  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  34158421 aattgaatgtaatttgcatttaattttatgataataaac 34158459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 296
Target Start/End: Original strand, 34158509 - 34158547
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaa 296  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  34158509 gataaaagtttatcttttttacttatattttggaacaaa 34158547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 8711818 - 8711773
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||| ||||||||||||||||||||||||  ||||| ||||||    
T  8711818 gataaaaatttgtcttttttatttatattttgagacaaataaaatg 8711773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 13143706 - 13143661
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||| ||||||||  ||||||||||| ||||||||||||    
T  13143706 gataaaagtttatcttttttgcttatattttgggacaaagaaaatg 13143661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 13144179 - 13144224
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||    
T  13144179 gataaaagtttgtcttttttgcttatattttgagacaaagaaaatg 13144224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 17713184 - 17713139
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||| |||||||||| ||||| ||||| ||||||||||||    
T  17713184 gataaaagttggtcttttttacttataatttgggacaaagaaaatg 17713139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 20051560 - 20051504
Alignment:
Q  248 tcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaatgtg 305  Q
    ||||| ||||||||||| |||||| ||||| || ||||||||| ||||||||||||||    
T  20051560 tcttggaaaagataaaaatttgtcgtttttctt-atattttggtacaaagaaaatgtg 20051504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 36190713 - 36190668
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||| ||||||||||  ||||||||||| ||||||||||||    
T  36190713 gataaaagtgtgtcttttttgcttatattttgggacaaagaaaatg 36190668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 2052866 - 2052830
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataa 237  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  2052866 aattgaatgtaatttgcatttaatttcatgagaataa 2052830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 3099914 - 3099870
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||| |||||||||||  |||||||||| |||||||||||||    
T  3099914 ataaaagattgtcttttttgcttatattttgaaacaaagaaaatg 3099870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 27752548 - 27752504
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||| ||||||||| |||||||||||  ||||||||||||    
T  27752548 ataaaagttggtcttttttgtttatattttgagacaaagaaaatg 27752504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 30576045 - 30576089
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaat 302  Q
    ||||||| ||||||||||||  ||||||||||| |||||||||||    
T  30576045 gataaaaatttgtcttttttgcttatattttgggacaaagaaaat 30576089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 35456160 - 35456192
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    ||||||||| |||||||||||||||||||||||    
T  35456160 atgtaatttacatttaattttatgagaataaac 35456192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 36538020 - 36537976
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    |||||||||||||||||||  ||||||||||  ||||||||||||    
T  36538020 ataaaagtttgtcttttttgcttatattttgagacaaagaaaatg 36537976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 302
Target Start/End: Complemental strand, 154887 - 154792
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaaat 302  Q
    ||||||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||    
T  154887 atgtaatttgcatttaattttatgagaataaaaaaaaaaaatcttgaaaaagataaaagtttatcttttttacttatattttgagacaaagaaaat 154792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 702 - 806
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaaa 300  Q
    ||||| |||||||||||||||||||||||||||||||          ||||| ||||||||||||||||| ||||||  ||||||||||| |||||||||    
T  702 aattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaaagtttgtgttttttgcttatattttggtacaaagaaa 801  T
Q  301 atgtg 305  Q
    |||||    
T  802 atgtg 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 10077 - 9979
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| ||||||||||||||||||| |||||||||||||        ||||  |||||||||||||||| |||||||| ||||||||||| ||||||||    
T  10077 aattgaatgtaatttgcatttaattgtatgagaataaacaaaaaaaatcttagaaaagataaaagtttgccttttttacttatattttgggacaaagaa 9979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 3557 - 3655
Alignment:
Q  201 aattggatgtaatttgcatttaattttatgagaataaacnnnnnnnntcttgaaaaagataaaagtttgtcttttttatttatattttggaacaaagaa 299  Q
    ||||| ||||||||||||||||||| |||||||||||||        ||||  ||||||||||||||| ||||||||  ||||||||||| ||||||||    
T  3557 aattgaatgtaatttgcatttaattgtatgagaataaacaacaacaatcttagaaaagataaaagtttatcttttttgcttatattttgggacaaagaa 3655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 956 - 911
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||    
T  956 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 8916 - 8871
Alignment:
Q  258 gataaaagtttgtcttttttatttatattttggaacaaagaaaatg 303  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||    
T  8916 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 8871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 1038 - 1006
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    ||||||||||| |||||||||||||||||||||    
T  1038 atgtaatttgcgtttaattttatgagaataaac 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 8998 - 8966
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    ||||||||||| |||||||||||||||||||||    
T  8998 atgtaatttgcgtttaattttatgagaataaac 8966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 157737 - 157694
Alignment:
Q  259 ataaaagtttgtcttttttatttatattttggaacaaagaaaat 302  Q
    |||||||||||||||||||  ||||||||||| |||||||||||    
T  157737 ataaaagtttgtcttttttgcttatattttgggacaaagaaaat 157694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 233615 - 233652
Alignment:
Q  200 taattggatgtaatttgcatttaattttatgagaataa 237  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  233615 taattgaatgtaatttgcatttaatttcatgagaataa 233652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 890 - 858
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||| ||||||||||||    
T  890 atgtaatttgcatttaatttcatgagaataaac 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 44906 - 44938
Alignment:
Q  207 atgtaatttgcatttaattttatgagaataaac 239  Q
    |||||||||||||||||||||| ||||||||||    
T  44906 atgtaatttgcatttaattttacgagaataaac 44938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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