View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5481_high_8 (Length: 252)
Name: NF5481_high_8
Description: NF5481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5481_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 36882159 - 36882402
Alignment:
| Q |
1 |
ttgcattcggtgatgaaatactatatgatatgtaattgatttttagatcattcattctcccttctaaaaccttaaacaatgcctttaaagcagtgtagat |
100 |
Q |
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| T |
36882159 |
ttgcattcggtggtgaaatactatatgatatgtaattgatttttagatcattcattctcccgtctaaaaccttaaacaatgcctttaaagcagtgtagat |
36882258 |
T |
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| Q |
101 |
catttggctgatctaccaagacaattacaatgtttatatacattgttgcaatgttttgataggagacataaagaggatatggtagataacaactgaaata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36882259 |
catttggctgatctaccaagacaattacaatgtttatatacattgttgcaatgttttgataggagacataaagaggatatggtagataacaactgaaata |
36882358 |
T |
|
| Q |
201 |
ttatatgtggtttcatttttattacagcactggttattcatctc |
244 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
36882359 |
ttatatgtggtttcatttttattatagcactggttattcatctc |
36882402 |
T |
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