View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5484_high_6 (Length: 380)

Name: NF5484_high_6
Description: NF5484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5484_high_6
NF5484_high_6
[»] chr6 (9 HSPs)
chr6 (1-294)||(33521796-33522088)
chr6 (164-285)||(33523859-33523980)
chr6 (1-165)||(33525133-33525297)
chr6 (164-274)||(19268325-19268435)
chr6 (166-269)||(2434731-2434834)
chr6 (317-371)||(33522090-33522144)
chr6 (337-371)||(33523770-33523804)
chr6 (167-212)||(26839275-26839320)
chr6 (295-331)||(2434853-2434889)
[»] chr8 (10 HSPs)
chr8 (169-371)||(20477180-20477376)
chr8 (166-371)||(8316233-8316432)
chr8 (166-242)||(45120728-45120804)
chr8 (162-224)||(6253606-6253668)
chr8 (166-212)||(44373991-44374037)
chr8 (166-211)||(33175256-33175301)
chr8 (165-241)||(233928-234004)
chr8 (165-241)||(710339-710415)
chr8 (165-241)||(747551-747627)
chr8 (165-241)||(871446-871522)
[»] chr7 (8 HSPs)
chr7 (165-248)||(10555070-10555153)
chr7 (161-248)||(47317782-47317869)
chr7 (166-216)||(31594336-31594386)
chr7 (167-212)||(27870307-27870352)
chr7 (166-248)||(41964783-41964865)
chr7 (166-244)||(42014578-42014656)
chr7 (167-211)||(18665312-18665356)
chr7 (166-246)||(45075208-45075288)
[»] chr5 (7 HSPs)
chr5 (162-371)||(37979821-37980024)
chr5 (295-371)||(24169870-24169946)
chr5 (166-248)||(24169987-24170069)
chr5 (163-219)||(19877092-19877148)
chr5 (166-219)||(23067688-23067741)
chr5 (167-248)||(34394180-34394261)
chr5 (164-217)||(10825304-10825357)
[»] chr4 (9 HSPs)
chr4 (166-216)||(43035767-43035817)
chr4 (167-255)||(36075773-36075860)
chr4 (163-218)||(36506420-36506475)
chr4 (166-219)||(40729934-40729987)
chr4 (167-219)||(22436038-22436090)
chr4 (166-217)||(47110775-47110826)
chr4 (166-219)||(2333851-2333904)
chr4 (166-211)||(14968406-14968451)
chr4 (166-211)||(19438326-19438371)
[»] chr1 (10 HSPs)
chr1 (161-371)||(18243313-18243519)
chr1 (166-215)||(37770809-37770858)
chr1 (164-241)||(33216332-33216409)
chr1 (166-216)||(21762073-21762123)
chr1 (166-216)||(50915366-50915416)
chr1 (164-221)||(33216983-33217040)
chr1 (164-216)||(38047465-38047517)
chr1 (165-212)||(45423338-45423385)
chr1 (163-212)||(13707529-13707578)
chr1 (164-217)||(27105625-27105678)
[»] chr3 (11 HSPs)
chr3 (164-248)||(55151325-55151409)
chr3 (164-219)||(42993493-42993548)
chr3 (165-219)||(44846955-44847009)
chr3 (163-248)||(44006392-44006477)
chr3 (295-371)||(12920-12995)
chr3 (164-216)||(51014305-51014357)
chr3 (166-211)||(33840295-33840340)
chr3 (165-217)||(18912288-18912340)
chr3 (166-211)||(4117818-4117863)
chr3 (167-211)||(30287390-30287434)
chr3 (164-212)||(37459726-37459774)
[»] scaffold0146 (1 HSPs)
scaffold0146 (166-216)||(24432-24482)
[»] chr2 (5 HSPs)
chr2 (166-248)||(31500780-31500862)
chr2 (165-248)||(2119444-2119527)
chr2 (166-219)||(41474747-41474800)
chr2 (166-219)||(4425878-4425931)
chr2 (164-212)||(31204214-31204262)
[»] scaffold1043 (1 HSPs)
scaffold1043 (166-241)||(2604-2679)
[»] scaffold0688 (1 HSPs)
scaffold0688 (166-248)||(5913-5995)


Alignment Details
Target: chr6 (Bit Score: 183; Significance: 7e-99; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 33521796 - 33522088
Alignment:
Q  1 taaatttaaagtaaaagattgtagaaatcatatagataaagtaagaaaaccacaacttagggatgggagatgctgaaacagttcaaatctattttgttag 100  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||    
T  33521796 taaatttaaagcaaaagattgtagaaatcatataaataaagtaagaaaaccacaactt-ggaatgggagatgctgaaacagtttaaatctattttgttag 33521894  T
Q  101 aaataaaatagtcagttctattatgtaatgggcatca-tgataaaagttgtttacaaaatgtatttgaaaattgcttttctgatattgataagttcacat 199  Q
    |||||||||||||| || ||||||||||||| ||||  |||||||||||||||||||||||||||| |||||| | ||||||| ||||||||||||||||    
T  33521895 aaataaaatagtcaattttattatgtaatgg-catcggtgataaaagttgtttacaaaatgtatttaaaaatttcatttctgacattgataagttcacat 33521993  T
Q  200 tgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtttatcaagtcggcagaagttaactgccgttgagttcaacagtggtta 294  Q
    ||||||||||||||||| ||||||  | ||| ||||||| ||||||||||| |||| || |||||||||||||||| ||||||||||| ||||||    
T  33521994 tgacacaagtaaaatacctatatgcccccagcggcagttgacaaccgtttaccaagccgacagaagttaactgccgctgagttcaacaatggtta 33522088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 33523980 - 33523859
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtttatcaagtcggcaga 263  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||  | ||| || |||||||||||||||| ||||||||||||    
T  33523980 ttgaaaattgcttttatgacattgataagttcacattgacacaagtaaaatacctatatgcccccagcggtagttaacaaccgtttaccaagtcggcaga 33523881  T
Q  264 agttaactgccgttgagttcaa 285  Q
    |||||||| ||| |||||||||    
T  33523880 agttaactaccgctgagttcaa 33523859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 33525133 - 33525297
Alignment:
Q  1 taaatttaaagtaaaagattgtagaaatcatatagataaagtaagaaaaccacaacttagggatgggagatgctgaaacagttcaaatctattttgttag 100  Q
    |||||||| ||  ||||| ||||||||| ||||||||||| |||||||||||| ||||| ||||  ||||||  |||||| |||||| ||||||||||||    
T  33525133 taaatttagagagaaagactgtagaaattatatagataaaataagaaaaccacgactta-ggatttgagatgtggaaacaattcaaaactattttgttag 33525231  T
Q  101 aaataaaatagtcagttctattatgtaatgggcat-catgataaaagttgtttacaaaatgtattt 165  Q
    ||| |||| ||  |||| ||||||||||| |||||  |||||| |||| |||||||||||||||||    
T  33525232 aaacaaaagagctagttttattatgtaataggcatggatgatagaagtcgtttacaaaatgtattt 33525297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 274
Target Start/End: Original strand, 19268325 - 19268435
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtttatcaagtcggcaga 263  Q
    ||||||||||||||| | | ||||||||||| |||||||||||| ||||||||||| | | ||  |||||||||||||||||||||| |||| |||||      
T  19268325 ttgaaaattgcttttttcacattgataagtttacattgacacaaataaaatacttaaaagctcctagtggcagttaacaaccgtttaccaagccggcaac 19268424  T
Q  264 agttaactgcc 274  Q
    |||||||||||    
T  19268425 agttaactgcc 19268435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 2434731 - 2434834
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatg-ttctcagtggcagttaacaaccgtttatcaagtcggcagaa 264  Q
    |||||||| ||||| || || |||||||||||||||||||||||||||||| || ||| |||| || ||||||||||||||||||| |||| || |||||    
T  2434731 gaaaattgtttttccgacatcgataagttcacattgacacaagtaaaatacctaaatgcttct-agcggcagttaacaaccgtttaccaagccgacagaa 2434829  T
Q  265 gttaa 269  Q
    |||||    
T  2434830 gttaa 2434834  T

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Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 33522090 - 33522144
Alignment:
Q  317 ctggctcattttccaaaaattcattttccagtgtctctcctaaccaaatcctttg 371  Q
    ||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  33522090 ctgactcattttccagaaactcattttccagtgtctctcctaaccaaatcctttg 33522144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 371
Target Start/End: Complemental strand, 33523804 - 33523770
Alignment:
Q  337 tcattttccagtgtctctcctaaccaaatcctttg 371  Q
    ||||| |||||||||||||||||||||||||||||    
T  33523804 tcattctccagtgtctctcctaaccaaatcctttg 33523770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 26839320 - 26839275
Alignment:
Q  167 aaaattgcttttctgatattgataagttcacattgacacaagtaaa 212  Q
    |||||||||||||||| ||  | |||||||||||||||||||||||    
T  26839320 aaaattgcttttctgacatcaaaaagttcacattgacacaagtaaa 26839275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 2434853 - 2434889
Alignment:
Q  295 gttgttaactgccgctgcatgtctggctcattttcca 331  Q
    |||||||||||||||||| |||||| |||||||||||    
T  2434853 gttgttaactgccgctgcgtgtctgactcattttcca 2434889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 169 - 371
Target Start/End: Original strand, 20477180 - 20477376
Alignment:
Q  169 aattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtttatcaagtcggcagaagtta 268  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||| || |||  | ||| |||||||||||||||||   | |  || | | |||||    
T  20477180 aattacttttctgacattgataagttcacattgacacaagtaaaatacctaaatgcccccagcggcagttaacaaccgttaggccatacgccggcagtta 20477279  T
Q  269 actgccgttgagttcaacagtggttagttgttaactgccgctgcatgtctggctcattttccaaaaattcattttccagtgtctctcctaaccaaatcct 368  Q
    ||| ||| ||| |||  |||||    |||||||||| ||||| | ||||||| |||||||||| ||  |||||||||||||||| |||||||||||||||    
T  20477280 acttccgctgacttc--cagtg----gttgttaactaccgctacgtgtctggatcattttccagaacctcattttccagtgtctttcctaaccaaatcct 20477373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 371
Target Start/End: Original strand, 8316233 - 8316432
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtttatcaagtcggcagaag 265  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||  ||| |||||||||||||   | |  || ||| ||    
T  8316233 gaaaattgcttttctgacattgataagttcacattgacacaagtaaaatacttaaatgtcctcaacggccgttaacaaccgttaggccatgcgccagcag 8316332  T
Q  266 ttaactgccg-ttgagttcaacagtggttagttgttaactgccgctgcatgtctggctcattttccaaaaattcattttccagtgtctctcctaaccaaa 364  Q
    |||||||||| | | || ||||        | |||||||| ||||| | ||||||| |||||||||| | | |||||||||||||| | |||||||||||    
T  8316333 ttaactgccgctggcgtccaac-------ggatgttaactaccgctacgtgtctggatcattttccagagactcattttccagtgtttttcctaaccaaa 8316425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 45120804 - 45120728
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaaca 242  Q
    ||||||||||||||||| || || ||||||||| ||||||||||||| ||||||  ||| | ||| |||||||||||    
T  45120804 gaaaattgcttttctgacatagaaaagttcacaatgacacaagtaaattacttaattgtccccagcggcagttaaca 45120728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 6253668 - 6253606
Alignment:
Q  162 atttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgt 224  Q
    ||||||||||||||||||| | || || || |||||| |||||||||||||||||||| ||||    
T  6253668 atttgaaaattgcttttctaacatagaaaacttcacaatgacacaagtaaaatacttaaatgt 6253606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 44373991 - 44374037
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaa 212  Q
    ||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  44373991 gaaaattgcttttctgacattcataacttcacaatgacacaagtaaa 44374037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 33175301 - 33175256
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaa 211  Q
    ||||||||||||||||| ||||| || |||||| ||||||||||||    
T  33175301 gaaaattgcttttctgacattgagaacttcacaatgacacaagtaa 33175256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 233928 - 234004
Alignment:
Q  165 tgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaac 241  Q
    |||||||||||||| ||||||  | || |||| | |||||||||||||||||||| ||| ||| || || |||||||    
T  233928 tgaaaattgcttttgtgatataaaaaacttcagaatgacacaagtaaaatacttaaatgctcttagcggtagttaac 234004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 710339 - 710415
Alignment:
Q  165 tgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaac 241  Q
    |||||||||||||| ||||||  | || |||| | |||||||||||||||||||| ||| ||| || || |||||||    
T  710339 tgaaaattgcttttgtgatataaaaaacttcagaatgacacaagtaaaatacttaaatgctcttagcggtagttaac 710415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 747551 - 747627
Alignment:
Q  165 tgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaac 241  Q
    |||||||||||||| ||||||  | || |||| | |||||||||||||||||||| ||| ||| || || |||||||    
T  747551 tgaaaattgcttttgtgatataaaaaacttcagaatgacacaagtaaaatacttaaatgctcttagcggtagttaac 747627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 871446 - 871522
Alignment:
Q  165 tgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaac 241  Q
    |||||||||||||| ||||||  | || |||| | |||||||||||||||||||| ||| ||| || || |||||||    
T  871446 tgaaaattgcttttgtgatataaaaaacttcagaatgacacaagtaaaatacttaaatgctcttagcggtagttaac 871522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 10555153 - 10555070
Alignment:
Q  165 tgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtt 248  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||| | ||  |||||||||||||||||    
T  10555153 tgaaaattgcttttctgacattgataagttcacattgacacaagtaaaatacctaaatgtccccaacggcagttaacaaccgtt 10555070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 47317869 - 47317782
Alignment:
Q  161 tatttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtt 248  Q
    |||||||||||||||||||||| ||||| || || ||| |||||||||||||||||||| |||  | ||| || ||||||| ||||||    
T  47317869 tatttgaaaattgcttttctgacattgaaaactttacaatgacacaagtaaaatacttaaatgcccccagcggtagttaactaccgtt 47317782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 31594386 - 31594336
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatac 216  Q
    |||||||| |||||||||||||| ||||||  |||||||||||||||||||    
T  31594386 gaaaattgtttttctgatattgaaaagttccaattgacacaagtaaaatac 31594336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 27870352 - 27870307
Alignment:
Q  167 aaaattgcttttctgatattgataagttcacattgacacaagtaaa 212  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||    
T  27870352 aaaattgcttttttgacattgataacttcacattgacacaagtaaa 27870307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 41964865 - 41964783
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtt 248  Q
    ||||||||||||||||| ||||| ||||||  ||||||| ||||||| |||||| | || | ||| || ||||||| ||||||    
T  41964865 gaaaattgcttttctgacattgaaaagttccaattgacataagtaaattacttaaacgtccccagcggtagttaactaccgtt 41964783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 42014656 - 42014578
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaac 244  Q
    ||||||||||||||||| | ||| || ||   ||||||||||||||||||| || |||  | |||||||||||||||||    
T  42014656 gaaaattgcttttctgacaatgaaaaatttctattgacacaagtaaaatacgtaaatgcccccagtggcagttaacaac 42014578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 18665312 - 18665356
Alignment:
Q  167 aaaattgcttttctgatattgataagttcacattgacacaagtaa 211  Q
    |||||||||||||||| ||||| || |||||| ||||||||||||    
T  18665312 aaaattgcttttctgacattgagaacttcacaatgacacaagtaa 18665356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 45075208 - 45075288
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccg 246  Q
    |||||||| |||||||| | ||| || |||  |||||||||||||||||||| | |||  | ||| |||||||||||||||    
T  45075208 gaaaattgtttttctgacaatgaaaacttcctattgacacaagtaaaatactaaaatgcccccagcggcagttaacaaccg 45075288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 371
Target Start/End: Original strand, 37979821 - 37980024
Alignment:
Q  162 atttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtttatcaagtcggca 261  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||||||||||| || ||   | ||| |||||||||| ||||||   | |  || |     
T  37979821 atttgaaaattgtttttctaacattgataagttcacattgacacaagtaaaatacctaaatacccccagcggcagttaacgaccgttaggccatgcgccg 37979920  T
Q  262 gaagttaactgccgttgagttcaacagtggttagttgttaactgccgctgcatgtctggctcattttccaaaaattcattttccagtgtctctcctaacc 361  Q
      |||||||||||| ||  |||  ||| |||||    |||||| ||||| | ||||||| |||||||||| ||| |||||||||||||||| | ||||||    
T  37979921 acagttaactgccgctggcttc--cagcggtta----ttaactaccgctacgtgtctggatcattttccagaaactcattttccagtgtcttttctaacc 37980014  T
Q  362 aaatcctttg 371  Q
    ||||||||||    
T  37980015 aaatcctttg 37980024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 295 - 371
Target Start/End: Complemental strand, 24169946 - 24169870
Alignment:
Q  295 gttgttaactgccgctgcatgtctggctcattttccaaaaattcattttccagtgtctctcctaaccaaatcctttg 371  Q
    |||||||||| ||||  | ||||||| |||||||||| ||| |||||||||||||||| ||||||||||||||||||    
T  24169946 gttgttaactaccgcgacgtgtctggatcattttccagaaactcattttccagtgtctttcctaaccaaatcctttg 24169870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 24170069 - 24169987
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtt 248  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||||  || || | | ||| ||||||||||||| |||    
T  24170069 gaaaattgctttcttgacattgataagttcacattgacacaagtaaaatatctaaatatccccagcggcagttaacaactgtt 24169987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 19877148 - 19877092
Alignment:
Q  163 tttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatactta 219  Q
    |||||||||||||||||||| ||||| ||||||  ||||||||||||||| ||||||    
T  19877148 tttgaaaattgcttttctgacattgaaaagttccaattgacacaagtaaattactta 19877092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 23067741 - 23067688
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatactta 219  Q
    ||||||||||||||||| ||||| ||||||  ||||||||||||||| ||||||    
T  23067741 gaaaattgcttttctgacattgaaaagttccaattgacacaagtaaattactta 23067688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 34394261 - 34394180
Alignment:
Q  167 aaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtt 248  Q
    |||||||||||||||| | ||| || |||| |||||||||||||||||| | | |||| | ||| | |||||||||||||||    
T  34394261 aaaattgcttttctgacaatgaaaacttcatattgacacaagtaaaataataaaatgtccccagcgacagttaacaaccgtt 34394180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 10825304 - 10825357
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatact 217  Q
    ||||||||||||||| ||| | ||| || |||| ||||||||||||||||||||    
T  10825304 ttgaaaattgcttttatgacaatgaaaacttcatattgacacaagtaaaatact 10825357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 43035767 - 43035817
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatac 216  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43035767 gaaaattgcttttctgacattgataagttcacattgacacaagtaaaatac 43035817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 36075860 - 36075773
Alignment:
Q  167 aaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtttatcaag 255  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||| | | ||||||||| |  || |||||||||||||| ||||    
T  36075860 aaaattacttttctgacattgataagttcacattgacacaagtaaaata-tcaaatgttctcaataacatttaacaaccgtttaccaag 36075773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 36506475 - 36506420
Alignment:
Q  163 tttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatactt 218  Q
    |||||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||    
T  36506475 tttgaaaattacttttttgacattgataacttcacattgacacaagtaaaatactt 36506420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 40729987 - 40729934
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatactta 219  Q
    ||||||||||||||||| ||||| || |||||| ||||||||||||||||||||    
T  40729987 gaaaattgcttttctgacattgaaaacttcacaatgacacaagtaaaatactta 40729934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 22436038 - 22436090
Alignment:
Q  167 aaaattgcttttctgatattgataagttcacattgacacaagtaaaatactta 219  Q
    |||||||||||||||| ||||| ||||||  || |||||||||||||||||||    
T  22436038 aaaattgcttttctgacattgaaaagttccaatcgacacaagtaaaatactta 22436090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 47110826 - 47110775
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatact 217  Q
    ||||||||||||||| || |||| || || ||||||||||||||||||||||    
T  47110826 gaaaattgcttttctaatcttgaaaattttacattgacacaagtaaaatact 47110775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 2333904 - 2333851
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatactta 219  Q
    ||||||||||||||||| ||  | || |||||| ||||||||||||||||||||    
T  2333904 gaaaattgcttttctgacataaaaaacttcacaatgacacaagtaaaatactta 2333851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 14968406 - 14968451
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaa 211  Q
    |||||||||||||| || |||||||| |||||||||||||| ||||    
T  14968406 gaaaattgcttttcagacattgataacttcacattgacacatgtaa 14968451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 19438326 - 19438371
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaa 211  Q
    ||||||||||||| ||||||||| || |||||| ||||||||||||    
T  19438326 gaaaattgcttttatgatattgagaacttcacaatgacacaagtaa 19438371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 371
Target Start/End: Complemental strand, 18243519 - 18243313
Alignment:
Q  161 tatttgaaaattgcttttctgatattgataa--gttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtttatcaagtcg 258  Q
    |||| ||||||||||||||||| ||||||||  ||| ||||||||||||||||||||| || |||  | ||| |||||||||||||||||   | |  ||    
T  18243519 tattcgaaaattgcttttctgacattgataaaagtttacattgacacaagtaaaatacataaatgcccccagcggcagttaacaaccgttaggccatgcg 18243420  T
Q  259 gcagaagttaactgccgttgagttcaacagtggttagttgttaactgccgctgcatgtctggctcattttccaaaaattcattttccagtgtctctccta 358  Q
     | | |||||||||||| ||  |||  ||| |    ||||||||||||| || | ||||| |  ||||||||| ||  |||||||||||||||| |||||    
T  18243419 tccgcagttaactgccgctggcttc--cagcg----gttgttaactgccactacgtgtctagaccattttccagaacctcattttccagtgtctttccta 18243326  T
Q  359 accaaatcctttg 371  Q
    |||||||||||||    
T  18243325 accaaatcctttg 18243313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 37770858 - 37770809
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaata 215  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37770858 gaaaattgcttttctgacattgataagttcacattgacacaagtaaaata 37770809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 33216332 - 33216409
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaac 241  Q
    |||||||||| |||| ||| ||||| || |||||| |||||||||||||||||||| ||| |||||| || |||||||    
T  33216332 ttgaaaattgtttttttgacattgaaaacttcacaatgacacaagtaaaatacttaaatgctctcagcggtagttaac 33216409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 21762123 - 21762073
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatac 216  Q
    |||||||| |||||||| ||| ||||||||||||||||| |||||||||||    
T  21762123 gaaaattgtttttctgacattcataagttcacattgacataagtaaaatac 21762073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 50915416 - 50915366
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatac 216  Q
    ||||||||||||||||| ||||| ||||||  |||||||||||||||||||    
T  50915416 gaaaattgcttttctgacattgaaaagttccaattgacacaagtaaaatac 50915366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 33217040 - 33216983
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttata 221  Q
    ||||||||||||||||||| ||||| || |||||| ||| |||| |||||||||||||    
T  33217040 ttgaaaattgcttttctgacattgaaaacttcacaatgatacaaataaaatacttata 33216983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 38047517 - 38047465
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatac 216  Q
    ||||||||||||||||||| ||||| |||||   |||||||||||||||||||    
T  38047517 ttgaaaattgcttttctgacattgaaaagtttcaattgacacaagtaaaatac 38047465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 45423385 - 45423338
Alignment:
Q  165 tgaaaattgcttttctgatattgataagttcacattgacacaagtaaa 212  Q
    |||||||||||||||||| ||  | |||||||||||||||||||||||    
T  45423385 tgaaaattgcttttctgacatcaaaaagttcacattgacacaagtaaa 45423338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 13707578 - 13707529
Alignment:
Q  163 tttgaaaattgcttttctgatattgataagttcacattgacacaagtaaa 212  Q
    |||||||||||||||||| | ||||| || |||| |||||||||||||||    
T  13707578 tttgaaaattgcttttctcacattgaaaatttcatattgacacaagtaaa 13707529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 27105625 - 27105678
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatact 217  Q
    |||||||||| |||||||| | ||| || |||| ||||||||||||||||||||    
T  27105625 ttgaaaattgtttttctgacaatgaaaacttcatattgacacaagtaaaatact 27105678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 55151409 - 55151325
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtt 248  Q
    ||||||||||||||||||| ||||| ||||||  ||||||||| ||||||||| || ||| || ||| |||||||||||||||||    
T  55151409 ttgaaaattgcttttctgacattgaaaagttccaattgacacaggtaaaatacctaaatgctcccagcggcagttaacaaccgtt 55151325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 42993548 - 42993493
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatactta 219  Q
    |||||||||| |||||||||||||| || |||||| ||||||||||||||||||||    
T  42993548 ttgaaaattgtttttctgatattgaaaacttcacaatgacacaagtaaaatactta 42993493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 44846955 - 44847009
Alignment:
Q  165 tgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatactta 219  Q
    |||||||||||||||||| ||||| || |||||||| ||||||||||||||||||    
T  44846955 tgaaaattgcttttctgacattgaaaacttcacattaacacaagtaaaatactta 44847009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 44006392 - 44006477
Alignment:
Q  163 tttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtt 248  Q
    |||||||||||||||||||| ||||| || |||||| ||||| |||||||||||||| |||  | ||| || ||||||| ||||||    
T  44006392 tttgaaaattgcttttctgacattgaaaatttcacaatgacataagtaaaatacttaaatgcccccagcggtagttaactaccgtt 44006477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 371
Target Start/End: Complemental strand, 12995 - 12920
Alignment:
Q  295 gttgttaactgccgctgcatgtctggctcattttccaaaaattcattttccagtgtctctcctaaccaaatcctttg 371  Q
    |||||||||||||||| | || |||| |||||||||| ||  | |||||||||||||| ||||||||||||||||||    
T  12995 gttgttaactgccgctacgtg-ctggatcattttccagaagcttattttccagtgtctttcctaaccaaatcctttg 12920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 51014357 - 51014305
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatac 216  Q
    ||||||||||||||||||| ||||| ||||||  |||||||||||||||||||    
T  51014357 ttgaaaattgcttttctgacattgaaaagttccaattgacacaagtaaaatac 51014305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 33840295 - 33840340
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaa 211  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||    
T  33840295 gaaaattgcttttctgatattgagaacttcacaatgacacaagtaa 33840340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 18912340 - 18912288
Alignment:
Q  165 tgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatact 217  Q
    |||||||||||||||||| | ||| || |||| ||||||||||||||||||||    
T  18912340 tgaaaattgcttttctgacagtgaaaatttcatattgacacaagtaaaatact 18912288  T

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Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 4117818 - 4117863
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaa 211  Q
    |||||||||||||||||||| || || |||||| ||||||||||||    
T  4117818 gaaaattgcttttctgatatagaaaacttcacaatgacacaagtaa 4117863  T

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Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 30287390 - 30287434
Alignment:
Q  167 aaaattgcttttctgatattgataagttcacattgacacaagtaa 211  Q
    |||||||||||||||||||||| || |||||| | ||||||||||    
T  30287390 aaaattgcttttctgatattgagaacttcacaataacacaagtaa 30287434  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 37459726 - 37459774
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaa 212  Q
    ||||||||||||||| ||| || || || ||||||||||||||||||||    
T  37459726 ttgaaaattgcttttttgacatagaaaacttcacattgacacaagtaaa 37459774  T

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Target: scaffold0146 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 24432 - 24482
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatac 216  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  24432 gaaaatttcttttttgacattgataagttcacattgacacaagtaaaatac 24482  T

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Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 31500780 - 31500862
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtt 248  Q
    ||||||||||||||||| | ||| || |||| |||||||||||||||||||| | |||   |||| |||||||||||||||||    
T  31500780 gaaaattgcttttctgacaatgaaaacttcatattgacacaagtaaaatactaaaatgccttcagcggcagttaacaaccgtt 31500862  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 2119444 - 2119527
Alignment:
Q  165 tgaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtt 248  Q
    ||||||||| |||||||| | ||| || |||| |||||||||||||||||| | | ||| || ||| |||||||||||||||||    
T  2119444 tgaaaattgattttctgacaatgaaaacttcatattgacacaagtaaaatattgaaatgctcccagcggcagttaacaaccgtt 2119527  T

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Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 41474800 - 41474747
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatactta 219  Q
    |||||||| || ||| |||||||||| |||||| ||||||||||||||||||||    
T  41474800 gaaaattgtttctctcatattgataatttcacaatgacacaagtaaaatactta 41474747  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 4425878 - 4425931
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatactta 219  Q
    |||| |||||||||||| ||||| || |||||| | ||||||||||||||||||    
T  4425878 gaaagttgcttttctgacattgaaaacttcacaataacacaagtaaaatactta 4425931  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 31204262 - 31204214
Alignment:
Q  164 ttgaaaattgcttttctgatattgataagttcacattgacacaagtaaa 212  Q
    ||||||||||||||||||| ||  | ||||||||| |||||||||||||    
T  31204262 ttgaaaattgcttttctgacatacaaaagttcacaatgacacaagtaaa 31204214  T

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Target: scaffold1043 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1043
Description:

Target: scaffold1043; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 2604 - 2679
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaac 241  Q
    ||||||||||||||||| | ||| || |||  |||||||||||||||||||| | |||| ||||| ||||||||||    
T  2604 gaaaattgcttttctgacaatgacaacttcctattgacacaagtaaaatactaaaatgtcctcagcggcagttaac 2679  T

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Target: scaffold0688 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 5995 - 5913
Alignment:
Q  166 gaaaattgcttttctgatattgataagttcacattgacacaagtaaaatacttatatgttctcagtggcagttaacaaccgtt 248  Q
    ||||||||||||||||| ||||| |||||   ||||||||||||||||||| || ||| || ||| || ||| ||||||||||    
T  5995 gaaaattgcttttctgacattgaaaagtttcaattgacacaagtaaaatacgtaaatgctcccagcggtagtaaacaaccgtt 5913  T

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