View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5489-Insertion-8 (Length: 490)

Name: NF5489-Insertion-8
Description: NF5489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5489-Insertion-8
NF5489-Insertion-8
[»] chr1 (59 HSPs)
chr1 (8-220)||(12814915-12815128)
chr1 (286-392)||(12815204-12815311)
chr1 (393-446)||(13589659-13589712)
chr1 (390-449)||(1176714-1176773)
chr1 (395-446)||(17518602-17518653)
chr1 (385-446)||(8108993-8109055)
chr1 (393-446)||(41083211-41083264)
chr1 (393-490)||(47955306-47955404)
chr1 (392-446)||(48190770-48190825)
chr1 (392-446)||(20371353-20371407)
chr1 (392-446)||(27172115-27172169)
chr1 (393-446)||(49284409-49284463)
chr1 (393-446)||(17518303-17518356)
chr1 (392-445)||(20480613-20480666)
chr1 (393-446)||(22149403-22149455)
chr1 (396-444)||(22149701-22149750)
chr1 (391-490)||(41082907-41083006)
chr1 (396-446)||(8108724-8108775)
chr1 (393-446)||(31848192-31848246)
chr1 (394-444)||(46056904-46056953)
chr1 (393-446)||(47955608-47955662)
chr1 (393-446)||(48191355-48191409)
chr1 (392-446)||(50615621-50615675)
chr1 (392-446)||(50623449-50623503)
chr1 (393-446)||(20480168-20480221)
chr1 (396-446)||(1177018-1177069)
chr1 (392-446)||(6002236-6002291)
chr1 (392-446)||(9347125-9347180)
chr1 (388-446)||(39692000-39692059)
chr1 (392-446)||(48105116-48105171)
chr1 (391-442)||(49317750-49317801)
chr1 (393-446)||(32163043-32163097)
chr1 (393-446)||(44911025-44911079)
chr1 (392-442)||(49318170-49318220)
chr1 (393-442)||(999529-999578)
chr1 (393-446)||(9347551-9347604)
chr1 (388-441)||(19007730-19007783)
chr1 (393-449)||(48313789-48313846)
chr1 (396-440)||(46057199-46057243)
chr1 (394-446)||(47498495-47498547)
chr1 (395-446)||(50526472-50526524)
chr1 (396-446)||(1176839-1176890)
chr1 (392-446)||(6703894-6703949)
chr1 (392-446)||(13918445-13918500)
chr1 (394-444)||(13918869-13918920)
chr1 (393-440)||(21687473-21687520)
chr1 (392-446)||(26814693-26814748)
chr1 (396-442)||(31847898-31847945)
chr1 (396-446)||(50430081-50430132)
chr1 (396-442)||(999115-999161)
chr1 (393-446)||(4692433-4692487)
chr1 (396-444)||(22149580-22149630)
chr1 (393-446)||(28633720-28633774)
chr1 (398-445)||(17518481-17518530)
chr1 (393-445)||(39690794-39690847)
chr1 (396-444)||(42611188-42611237)
chr1 (391-443)||(46823841-46823894)
chr1 (395-446)||(6002894-6002946)
chr1 (393-444)||(50429656-50429708)
[»] scaffold0319 (3 HSPs)
scaffold0319 (391-490)||(6653-6752)
scaffold0319 (393-446)||(6394-6448)
scaffold0319 (398-444)||(6575-6623)
[»] chr6 (37 HSPs)
chr6 (393-449)||(10039676-10039732)
chr6 (393-490)||(21031979-21032076)
chr6 (392-446)||(3403716-3403771)
chr6 (393-490)||(3403945-3404043)
chr6 (396-446)||(3825530-3825580)
chr6 (392-442)||(30388061-30388111)
chr6 (393-446)||(13579651-13579704)
chr6 (393-490)||(31598229-31598326)
chr6 (392-446)||(11656782-11656837)
chr6 (388-446)||(18241849-18241908)
chr6 (392-446)||(33828989-33829044)
chr6 (396-442)||(31598732-31598778)
chr6 (393-446)||(33829636-33829690)
chr6 (393-446)||(33655115-33655168)
chr6 (406-446)||(30388362-30388402)
chr6 (383-446)||(33971983-33972047)
chr6 (393-441)||(21032285-21032334)
chr6 (382-446)||(23250582-23250645)
chr6 (398-446)||(2762611-2762661)
chr6 (398-446)||(10039843-10039893)
chr6 (385-446)||(10087858-10087920)
chr6 (392-446)||(22684358-22684412)
chr6 (392-446)||(22754656-22754710)
chr6 (388-446)||(29074372-29074430)
chr6 (388-446)||(29079136-29079194)
chr6 (388-446)||(29106945-29107003)
chr6 (398-442)||(12714436-12714481)
chr6 (393-446)||(23250892-23250945)
chr6 (392-490)||(18242112-18242211)
chr6 (391-446)||(33974299-33974355)
chr6 (393-446)||(7654548-7654602)
chr6 (398-446)||(11656608-11656658)
chr6 (410-490)||(2762501-2762581)
chr6 (396-444)||(23250772-23250821)
chr6 (398-444)||(3403867-3403915)
chr6 (413-445)||(11656535-11656567)
chr6 (398-444)||(30388242-30388290)
[»] chr4 (66 HSPs)
chr4 (393-446)||(3930480-3930533)
chr4 (392-490)||(16555773-16555872)
chr4 (388-446)||(35393776-35393834)
chr4 (388-446)||(13198906-13198965)
chr4 (393-446)||(16555515-16555569)
chr4 (393-446)||(18077202-18077256)
chr4 (393-446)||(50678779-50678833)
chr4 (393-446)||(56505693-56505747)
chr4 (393-446)||(11241661-11241714)
chr4 (394-446)||(8488482-8488534)
chr4 (394-446)||(22681576-22681628)
chr4 (388-446)||(24775783-24775842)
chr4 (388-446)||(36095812-36095871)
chr4 (396-446)||(36096475-36096526)
chr4 (392-446)||(50679424-50679479)
chr4 (392-446)||(3930178-3930232)
chr4 (392-446)||(27304717-27304770)
chr4 (397-446)||(49178816-49178866)
chr4 (389-445)||(5206231-5206287)
chr4 (390-443)||(7603422-7603475)
chr4 (384-444)||(22681881-22681942)
chr4 (393-446)||(26207361-26207414)
chr4 (396-490)||(13198606-13198702)
chr4 (392-446)||(4239366-4239421)
chr4 (393-446)||(8182172-8182227)
chr4 (392-442)||(11241388-11241439)
chr4 (392-446)||(32703650-32703705)
chr4 (406-445)||(54509116-54509155)
chr4 (393-446)||(5205988-5206042)
chr4 (394-446)||(8181992-8182046)
chr4 (393-446)||(9023244-9023298)
chr4 (398-446)||(27304893-27304943)
chr4 (393-446)||(28196346-28196400)
chr4 (393-446)||(28196773-28196827)
chr4 (393-446)||(43051252-43051306)
chr4 (394-446)||(11529169-11529222)
chr4 (393-446)||(23539841-23539893)
chr4 (394-446)||(25161879-25161932)
chr4 (412-445)||(39415244-39415277)
chr4 (396-444)||(47219203-47219252)
chr4 (393-446)||(48405962-48406015)
chr4 (398-449)||(49178644-49178697)
chr4 (393-446)||(169013-169068)
chr4 (394-446)||(7603146-7603197)
chr4 (398-444)||(16555695-16555743)
chr4 (398-443)||(5206138-5206185)
chr4 (393-443)||(9380744-9380795)
chr4 (391-445)||(23540253-23540308)
chr4 (388-446)||(32703220-32703279)
chr4 (390-444)||(39086625-39086680)
chr4 (393-447)||(39415523-39415578)
chr4 (396-446)||(43050610-43050661)
chr4 (393-446)||(293217-293271)
chr4 (393-446)||(9023680-9023734)
chr4 (393-446)||(9380307-9380361)
chr4 (393-446)||(26207746-26207800)
chr4 (393-446)||(39744465-39744519)
chr4 (393-446)||(45830196-45830250)
chr4 (392-433)||(49178532-49178574)
chr4 (393-445)||(25225399-25225452)
chr4 (398-449)||(35393604-35393657)
chr4 (396-445)||(48406386-48406435)
chr4 (393-445)||(54508815-54508868)
chr4 (415-447)||(8488211-8488243)
chr4 (402-442)||(35393489-35393529)
chr4 (393-440)||(56506580-56506628)
[»] chr3 (59 HSPs)
chr3 (393-446)||(47871122-47871175)
chr3 (392-490)||(20968976-20969074)
chr3 (391-449)||(42627543-42627601)
chr3 (390-446)||(17372295-17372352)
chr3 (392-447)||(9027032-9027087)
chr3 (392-446)||(10293909-10293964)
chr3 (391-446)||(42672976-42673031)
chr3 (396-446)||(14015964-14016014)
chr3 (393-446)||(18875191-18875245)
chr3 (393-445)||(18874882-18874935)
chr3 (393-445)||(45060872-45060925)
chr3 (393-447)||(47870823-47870878)
chr3 (392-446)||(3353127-3353181)
chr3 (393-446)||(20968718-20968772)
chr3 (388-446)||(21896511-21896569)
chr3 (392-446)||(24485460-24485514)
chr3 (392-446)||(42673296-42673350)
chr3 (391-440)||(45060594-45060644)
chr3 (382-446)||(13657434-13657499)
chr3 (394-447)||(17372593-17372645)
chr3 (393-446)||(40848521-40848574)
chr3 (393-445)||(8315083-8315135)
chr3 (388-490)||(10293603-10293706)
chr3 (392-446)||(3644783-3644838)
chr3 (396-447)||(9026739-9026790)
chr3 (400-439)||(26540876-26540915)
chr3 (388-446)||(47666335-47666394)
chr3 (392-445)||(1927771-1927825)
chr3 (396-446)||(1928434-1928484)
chr3 (392-445)||(8314012-8314066)
chr3 (396-449)||(23630032-23630086)
chr3 (393-446)||(40848961-40849015)
chr3 (393-446)||(48159897-48159951)
chr3 (393-445)||(1101182-1101235)
chr3 (397-445)||(4947263-4947312)
chr3 (400-444)||(3353553-3353597)
chr3 (398-444)||(18875017-18875065)
chr3 (394-445)||(22429159-22429211)
chr3 (395-445)||(1100917-1100968)
chr3 (396-446)||(1101090-1101141)
chr3 (398-443)||(9026860-9026907)
chr3 (396-449)||(13657618-13657673)
chr3 (393-443)||(17441066-17441117)
chr3 (396-446)||(27238900-27238951)
chr3 (392-446)||(48160333-48160388)
chr3 (392-443)||(53688306-53688357)
chr3 (384-446)||(22429596-22429658)
chr3 (388-446)||(24485017-24485075)
chr3 (396-446)||(26540694-26540744)
chr3 (393-446)||(36180990-36181044)
chr3 (393-446)||(53687888-53687942)
chr3 (398-445)||(20968897-20968946)
chr3 (393-446)||(26007182-26007235)
chr3 (393-445)||(27238465-27238518)
chr3 (393-445)||(53766580-53766633)
chr3 (396-446)||(3644720-3644772)
chr3 (393-437)||(17440763-17440806)
chr3 (393-446)||(21895657-21895712)
chr3 (392-444)||(44008403-44008455)
[»] chr7 (63 HSPs)
chr7 (392-490)||(3687613-3687711)
chr7 (392-445)||(23686420-23686473)
chr7 (392-445)||(35079959-35080012)
chr7 (393-445)||(6908213-6908265)
chr7 (394-446)||(8953889-8953941)
chr7 (393-490)||(9412281-9412379)
chr7 (392-446)||(13772901-13772956)
chr7 (392-446)||(44599488-44599543)
chr7 (393-446)||(9412023-9412077)
chr7 (393-446)||(13772641-13772695)
chr7 (393-446)||(44600135-44600189)
chr7 (392-446)||(3687352-3687408)
chr7 (390-446)||(5349733-5349787)
chr7 (396-445)||(6908485-6908534)
chr7 (393-449)||(23686715-23686771)
chr7 (392-440)||(27096046-27096094)
chr7 (392-440)||(27182209-27182257)
chr7 (391-446)||(48359318-48359373)
chr7 (394-443)||(5735253-5735303)
chr7 (393-446)||(13863313-13863367)
chr7 (390-446)||(9035293-9035350)
chr7 (393-446)||(13744233-13744286)
chr7 (392-444)||(18925061-18925114)
chr7 (394-446)||(18925322-18925373)
chr7 (390-442)||(27096346-27096398)
chr7 (390-442)||(27181905-27181957)
chr7 (393-444)||(18864404-18864455)
chr7 (395-442)||(33628397-33628444)
chr7 (392-446)||(37888832-37888887)
chr7 (392-446)||(3204668-3204721)
chr7 (393-446)||(8643766-8643820)
chr7 (393-446)||(10533034-10533088)
chr7 (393-438)||(13863964-13864010)
chr7 (396-446)||(22740591-22740641)
chr7 (393-446)||(33628660-33628714)
chr7 (393-446)||(37889259-37889313)
chr7 (393-446)||(37972396-37972450)
chr7 (396-446)||(42419029-42419079)
chr7 (395-446)||(29291808-29291860)
chr7 (414-446)||(34235978-34236010)
chr7 (406-446)||(35080223-35080263)
chr7 (397-444)||(38191387-38191435)
chr7 (388-446)||(18863962-18864021)
chr7 (396-446)||(20418891-20418942)
chr7 (388-446)||(20419324-20419383)
chr7 (392-446)||(29292041-29292096)
chr7 (393-446)||(3205093-3205147)
chr7 (393-446)||(9034867-9034921)
chr7 (393-446)||(17156967-17157021)
chr7 (397-449)||(18925226-18925280)
chr7 (393-446)||(22740156-22740210)
chr7 (393-442)||(29292922-29292972)
chr7 (396-446)||(36527387-36527437)
chr7 (393-446)||(37971960-37972014)
chr7 (392-445)||(38191566-38191620)
chr7 (393-446)||(46816311-46816365)
chr7 (396-440)||(5735553-5735598)
chr7 (398-445)||(6908391-6908440)
chr7 (394-446)||(39983700-39983753)
chr7 (419-447)||(15567019-15567047)
chr7 (392-443)||(29293349-29293401)
chr7 (396-444)||(40017447-40017495)
chr7 (393-440)||(42418591-42418639)
[»] scaffold0110 (2 HSPs)
scaffold0110 (393-490)||(45763-45860)
scaffold0110 (393-443)||(45537-45587)
[»] chr5 (53 HSPs)
chr5 (393-446)||(22428934-22428987)
chr5 (393-446)||(22429196-22429249)
chr5 (392-490)||(18433014-18433113)
chr5 (393-490)||(26020450-26020548)
chr5 (391-446)||(34577164-34577219)
chr5 (396-490)||(34576870-34576963)
chr5 (393-447)||(41383166-41383220)
chr5 (392-445)||(23011078-23011131)
chr5 (392-446)||(18817611-18817666)
chr5 (393-446)||(18433316-18433370)
chr5 (393-490)||(25115757-25115855)
chr5 (393-446)||(25116061-25116115)
chr5 (393-490)||(25174849-25174947)
chr5 (393-446)||(25175151-25175205)
chr5 (392-445)||(9665828-9665880)
chr5 (394-446)||(22729440-22729492)
chr5 (396-444)||(31569910-31569958)
chr5 (396-446)||(9665560-9665609)
chr5 (392-438)||(12441320-12441365)
chr5 (393-442)||(16466746-16466796)
chr5 (393-446)||(18816952-18817006)
chr5 (396-445)||(23011383-23011432)
chr5 (393-446)||(37610202-37610255)
chr5 (393-446)||(37780320-37780373)
chr5 (396-445)||(41382896-41382945)
chr5 (392-444)||(37610620-37610672)
chr5 (396-446)||(11351427-11351478)
chr5 (392-443)||(22729007-22729058)
chr5 (393-444)||(43464194-43464245)
chr5 (393-446)||(5187830-5187884)
chr5 (393-446)||(12498567-12498621)
chr5 (393-446)||(12498928-12498982)
chr5 (399-444)||(16726084-16726130)
chr5 (393-446)||(26571164-26571218)
chr5 (396-446)||(43463759-43463809)
chr5 (388-446)||(19514520-19514580)
chr5 (392-444)||(37780744-37780797)
chr5 (395-439)||(2817582-2817626)
chr5 (392-444)||(12441041-12441093)
chr5 (391-446)||(21207224-21207280)
chr5 (388-446)||(5187546-5187605)
chr5 (396-445)||(9869563-9869611)
chr5 (396-446)||(10098941-10098991)
chr5 (393-446)||(11350808-11350861)
chr5 (393-446)||(19514963-19515017)
chr5 (393-446)||(33324838-33324892)
chr5 (396-445)||(41383048-41383100)
chr5 (398-445)||(25115885-25115934)
chr5 (398-445)||(25174977-25175026)
chr5 (396-443)||(34576991-34577040)
chr5 (387-444)||(42919299-42919356)
chr5 (398-444)||(18433143-18433191)
chr5 (393-444)||(34147512-34147564)
[»] scaffold0015 (2 HSPs)
scaffold0015 (392-444)||(17158-17210)
scaffold0015 (392-446)||(16852-16905)
[»] chr2 (55 HSPs)
chr2 (392-444)||(6171155-6171207)
chr2 (393-490)||(11883623-11883721)
chr2 (392-446)||(11883926-11883981)
chr2 (393-490)||(24832331-24832429)
chr2 (392-449)||(26737778-26737836)
chr2 (392-449)||(40221312-40221369)
chr2 (396-490)||(40469685-40469780)
chr2 (395-446)||(18055050-18055100)
chr2 (393-490)||(30190923-30191021)
chr2 (393-446)||(2639482-2639536)
chr2 (393-490)||(6171413-6171510)
chr2 (393-446)||(18296693-18296747)
chr2 (393-446)||(20347464-20347518)
chr2 (388-446)||(26737477-26737534)
chr2 (393-446)||(26841587-26841641)
chr2 (396-446)||(32673143-32673193)
chr2 (392-490)||(43495562-43495659)
chr2 (393-449)||(20347163-20347220)
chr2 (393-444)||(17346037-17346088)
chr2 (392-446)||(26842238-26842293)
chr2 (392-446)||(30191225-30191280)
chr2 (392-446)||(40469426-40469481)
chr2 (393-446)||(2638820-2638874)
chr2 (388-444)||(6495723-6495780)
chr2 (393-446)||(7980003-7980056)
chr2 (389-446)||(17345729-17345785)
chr2 (394-446)||(18296077-18296130)
chr2 (396-446)||(7591204-7591255)
chr2 (396-446)||(15920781-15920832)
chr2 (392-446)||(17850977-17851032)
chr2 (381-446)||(37720191-37720258)
chr2 (393-439)||(43495309-43495356)
chr2 (396-446)||(43495484-43495535)
chr2 (393-446)||(5378661-5378715)
chr2 (393-446)||(41790912-41790966)
chr2 (398-445)||(26737657-26737706)
chr2 (394-445)||(6495468-6495519)
chr2 (391-446)||(16910825-16910881)
chr2 (394-446)||(16911269-16911321)
chr2 (394-446)||(18750126-18750178)
chr2 (398-444)||(40469607-40469655)
chr2 (392-446)||(7664673-7664728)
chr2 (396-446)||(8851151-8851202)
chr2 (395-442)||(15321394-15321440)
chr2 (396-446)||(26692820-26692871)
chr2 (398-447)||(40221487-40221538)
chr2 (391-446)||(41790489-41790544)
chr2 (393-446)||(5379959-5380013)
chr2 (395-444)||(6325349-6325399)
chr2 (393-446)||(8851582-8851636)
chr2 (392-445)||(32672841-32672895)
chr2 (388-442)||(38490845-38490899)
chr2 (398-445)||(32673020-32673069)
chr2 (398-444)||(11883751-11883799)
chr2 (393-444)||(29230282-29230334)
[»] scaffold0376 (2 HSPs)
scaffold0376 (391-446)||(7600-7655)
scaffold0376 (393-446)||(7455-7508)
[»] scaffold0001 (4 HSPs)
scaffold0001 (392-446)||(438929-438984)
scaffold0001 (393-442)||(439203-439253)
scaffold0001 (396-445)||(183367-183416)
scaffold0001 (388-490)||(183619-183721)
[»] chr8 (60 HSPs)
chr8 (392-446)||(16929242-16929297)
chr8 (393-446)||(13936723-13936776)
chr8 (395-447)||(74688-74740)
chr8 (388-490)||(12281119-12281222)
chr8 (392-490)||(41662359-41662458)
chr8 (392-444)||(43162233-43162285)
chr8 (392-490)||(43245870-43245969)
chr8 (392-446)||(12281426-12281481)
chr8 (392-446)||(37752083-37752138)
chr8 (392-446)||(37752416-37752471)
chr8 (392-446)||(39724048-39724103)
chr8 (400-442)||(7127660-7127702)
chr8 (393-446)||(9823361-9823415)
chr8 (393-446)||(15155883-15155937)
chr8 (393-446)||(16928942-16928996)
chr8 (392-446)||(34313764-34313817)
chr8 (393-446)||(43246176-43246230)
chr8 (395-490)||(765736-765832)
chr8 (393-444)||(13026635-13026687)
chr8 (396-446)||(13027281-13027332)
chr8 (392-446)||(15156185-15156240)
chr8 (392-446)||(22851389-22851444)
chr8 (395-446)||(23123517-23123567)
chr8 (392-445)||(3463946-3464000)
chr8 (393-446)||(41662107-41662161)
chr8 (393-446)||(18020088-18020140)
chr8 (397-446)||(43162539-43162588)
chr8 (414-490)||(74941-75016)
chr8 (393-432)||(767720-767759)
chr8 (392-446)||(9822747-9822802)
chr8 (392-443)||(11007562-11007613)
chr8 (392-446)||(23123337-23123392)
chr8 (396-445)||(7127923-7127973)
chr8 (393-446)||(34498555-34498609)
chr8 (411-445)||(43598756-43598790)
chr8 (393-446)||(3463642-3463694)
chr8 (393-442)||(6092777-6092825)
chr8 (396-444)||(22786843-22786892)
chr8 (393-442)||(33747984-33748033)
chr8 (395-446)||(25438794-25438846)
chr8 (393-444)||(41662521-41662573)
chr8 (392-442)||(3307337-3307388)
chr8 (387-446)||(9623882-9623941)
chr8 (400-443)||(9930842-9930885)
chr8 (392-446)||(24473342-24473397)
chr8 (392-446)||(37397145-37397200)
chr8 (395-446)||(37670256-37670306)
chr8 (393-439)||(9465607-9465653)
chr8 (398-446)||(9465700-9465750)
chr8 (412-446)||(9465874-9465908)
chr8 (393-446)||(13937389-13937443)
chr8 (396-445)||(15042148-15042198)
chr8 (398-446)||(18019915-18019965)
chr8 (393-446)||(24473768-24473822)
chr8 (396-446)||(25439126-25439176)
chr8 (393-446)||(37396708-37396762)
chr8 (398-445)||(15156062-15156111)
chr8 (392-444)||(16169173-16169225)
chr8 (412-444)||(22851958-22851990)
chr8 (398-444)||(37752242-37752290)
[»] scaffold0192 (2 HSPs)
scaffold0192 (393-446)||(25369-25423)
scaffold0192 (398-444)||(25247-25295)
[»] scaffold0009 (1 HSPs)
scaffold0009 (393-446)||(205687-205740)
[»] scaffold0802 (3 HSPs)
scaffold0802 (392-490)||(1376-1475)
scaffold0802 (392-446)||(1117-1172)
scaffold0802 (398-445)||(1297-1346)
[»] scaffold0069 (1 HSPs)
scaffold0069 (392-446)||(50507-50561)
[»] scaffold1221 (2 HSPs)
scaffold1221 (391-444)||(1786-1839)
scaffold1221 (392-446)||(1510-1564)
[»] scaffold0002 (1 HSPs)
scaffold0002 (393-446)||(411923-411976)
[»] scaffold0328 (2 HSPs)
scaffold0328 (392-446)||(6151-6206)
scaffold0328 (393-446)||(6795-6849)
[»] scaffold0460 (1 HSPs)
scaffold0460 (392-446)||(763-817)
[»] scaffold0598 (2 HSPs)
scaffold0598 (394-445)||(6877-6927)
scaffold0598 (395-449)||(6609-6664)
[»] scaffold0017 (1 HSPs)
scaffold0017 (392-446)||(185274-185329)
[»] scaffold0535 (1 HSPs)
scaffold0535 (393-442)||(10012-10062)
[»] scaffold0041 (1 HSPs)
scaffold0041 (393-446)||(38695-38749)
[»] scaffold0176 (1 HSPs)
scaffold0176 (393-446)||(19621-19674)
[»] scaffold0035 (1 HSPs)
scaffold0035 (394-444)||(72967-73018)
[»] scaffold0029 (1 HSPs)
scaffold0029 (393-446)||(9905-9959)


Alignment Details
Target: chr1 (Bit Score: 174; Significance: 2e-93; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 8 - 220
Target Start/End: Original strand, 12814915 - 12815128
Alignment:
Q  8 tcaactatccactatagtttgatgtgaatggggatgcatatctctcttttacctccaaagatacaacaagttgaaatgaaagcaaaactactaataatgt 107  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12814915 tcaactatccactatagtttgatgtggatggggatgcaaatctctcttttacctccaaagatacaagaagttgaaatgaaagcaaaactactaataatgt 12815014  T
Q  108 cactctttagcctttatggatacattctttgagggattgatgcacatactactttgctttgtttggatgaggaaagaatt-aaagtaagacgaatgaata 206  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  12815015 cactccttagccttcatggatacattctttgagggattgatgcacatactcctttgcattgtttggatgaggaaagaattaaaactaagacgaatgaata 12815114  T
Q  207 ttgaaggaatgaaa 220  Q
    ||||||||||||||    
T  12815115 ttgaaggaatgaaa 12815128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 12815204 - 12815311
Alignment:
Q  286 tatgtatagggttgtctaaaccattagaccaataaagcccttgttataggccctgaatttatac-nnnnnnnnaactctaatatatttaaggtttccata 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||         |||||| |||||||||||||||||| |    
T  12815204 tatgtatagggttgtctaaaccattagaccaataaagcccttgttataggccctaaatttatactttttttttaactcttatatatttaaggtttccaga 12815303  T
Q  385 attaaaat 392  Q
    ||||||||    
T  12815304 attaaaat 12815311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 13589712 - 13589659
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13589712 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 13589659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 390 - 449
Target Start/End: Original strand, 1176714 - 1176773
Alignment:
Q  390 aatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccctct 449  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||    
T  1176714 aatggcttaattgcactttcccccctatattttgctaattgtgcgattttgcatccctct 1176773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 446
Target Start/End: Complemental strand, 17518653 - 17518602
Alignment:
Q  395 cttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17518653 cttaattgcacttttccccctatcttttgccaattgtgcgattttgcacccc 17518602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 8109055 - 8108993
Alignment:
Q  385 attaaaatggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  8109055 attaaaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 8108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 41083264 - 41083211
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  41083264 ggcttaattgcacttttccccctatcttttgttagttgtgcgattttgcacccc 41083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 47955306 - 47955404
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||         ||||||||||||||| ||||||||||||||||    
T  47955306 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgccccct 47955404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 48190770 - 48190825
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  48190770 tggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 48190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 20371407 - 20371353
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  20371407 tggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 20371353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 27172115 - 27172169
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  27172115 tggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 27172169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 49284409 - 49284463
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  49284409 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 49284463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 17518303 - 17518356
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||    
T  17518303 ggcttaattgcacctttccccttatcttttgttaattgtgcgattttgcacccc 17518356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 20480666 - 20480613
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  20480666 tggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccc 20480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 22149403 - 22149455
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  22149403 ggcttaattgcacttttccccctatc-tttggtaattgtgcgattttgcacccc 22149455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 22149750 - 22149701
Alignment:
Q  396 ttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 41082907 - 41083006
Alignment:
Q  391 atggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccctctcnnnnnnnngagcgattttgcacctcatctttttgccccc 489  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||||||||||| ||| |||         |||||||||||||| |||||||||||||||    
T  41082907 atggcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatccc-ctctttttttttagcgattttgcaccccatctttttgccccc 41083005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 8108724 - 8108775
Alignment:
Q  396 ttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  8108724 ttaattgcacttttcctccctatcttttgttaattgtgcgattttgcacccc 8108775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 31848246 - 31848192
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  31848246 ggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcacccc 31848192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 394 - 444
Target Start/End: Original strand, 46056904 - 46056953
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  46056904 gcttaattgcacttt-ccccctatcttttgctaattttgcgattttgcacc 46056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 47955662 - 47955608
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  47955662 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcacccc 47955608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 48191409 - 48191355
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  48191409 ggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcacccc 48191355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 50615675 - 50615621
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  50615675 tggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 50615621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 50623503 - 50623449
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  50623503 tggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 50623449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 20480168 - 20480221
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  20480168 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 20480221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 1177069 - 1177018
Alignment:
Q  396 ttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  1177069 ttaattgcacttttcctccctatctttcgctaattgtgcaattttgcacccc 1177018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 6002236 - 6002291
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||||||||  ||||||| |||||||||||||    
T  6002236 tggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcacccc 6002291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 9347125 - 9347180
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  9347125 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9347180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 39692059 - 39692000
Alignment:
Q  388 aaaatggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| |||||||||||||||||||||| ||| |||||  |||||||||||||||||||||    
T  39692059 aaaaaggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcacccc 39692000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 48105171 - 48105116
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  48105171 tggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacccc 48105116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 442
Target Start/End: Original strand, 49317750 - 49317801
Alignment:
Q  391 atggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    |||||||||||||||||||||||||||  ||||| |||||||| ||||||||    
T  49317750 atggcttaattgcacttttccccctatagtttgccaattgtgcaattttgca 49317801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 32163097 - 32163043
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  32163097 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32163043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 44911025 - 44911079
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  44911025 ggcttaattgcactttccccccctatattttgccaattgtgcgattttgcacccc 44911079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 49318220 - 49318170
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||||    
T  49318220 tggcttaattgcactttcccccctatagtttgccaattgtgcgattttgca 49318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 999578 - 999529
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    |||||||||||||||||||||||||   |||| |||||||||||||||||    
T  999578 ggcttaattgcacttttccccctatagattgccaattgtgcgattttgca 999529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 9347604 - 9347551
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| ||||||||  ||||| |||||||| ||||||||||||    
T  9347604 ggcttaattgcactttcccccctatagtttgccaattgtgcaattttgcacccc 9347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 441
Target Start/End: Original strand, 19007730 - 19007783
Alignment:
Q  388 aaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgc 441  Q
    |||| |||||||||||||||| ||||||||  ||||| ||||||||||||||||    
T  19007730 aaaaaggcttaattgcactttcccccctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 48313846 - 48313789
Alignment:
Q  393 ggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcacccctct 449  Q
    |||||||||| |||||| ||| | |||||||||||||||||| |||||||||||||||    
T  48313846 ggcttaattgtactttttcccattatcttttgctaattgtgcaattttgcacccctct 48313789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 46057243 - 46057199
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttg 440  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||    
T  46057243 ttaattgcactttttcccctatcttttgctaattatgcaattttg 46057199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 47498547 - 47498495
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||  ||||  ||||||||| |||||||||||    
T  47498547 gcttaattgcacttttccccctatagtttgtcaattgtgcggttttgcacccc 47498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 446
Target Start/End: Complemental strand, 50526524 - 50526472
Alignment:
Q  395 cttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 50526472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 1176839 - 1176890
Alignment:
Q  396 ttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||| ||||||||||||||  |||||||| ||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcacccc 1176890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 6703949 - 6703894
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||  ||||| |||||||| ||||||||||||    
T  6703949 tggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcacccc 6703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 13918445 - 13918500
Alignment:
Q  392 tggcttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| || |||||  ||||| |||||||||||||||||||||    
T  13918445 tggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcacccc 13918500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 444
Target Start/End: Complemental strand, 13918920 - 13918869
Alignment:
Q  394 gcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacc 13918869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 440
Target Start/End: Complemental strand, 21687520 - 21687473
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttg 440  Q
    |||||||| ||||||||||||||||  ||||| |||||||||||||||    
T  21687520 ggcttaatagcacttttccccctataatttgccaattgtgcgattttg 21687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 26814693 - 26814748
Alignment:
Q  392 tggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||| ||||||  ||||  |||||||||||||||||||||    
T  26814693 tggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 26814748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 31847898 - 31847945
Alignment:
Q  396 ttaattgcacttttccccct-atcttttgctaattgtgcgattttgca 442  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  31847898 ttaattgcactttacccccttatcttttgctaattgtgcaattttgca 31847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 50430132 - 50430081
Alignment:
Q  396 ttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 50430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 999115 - 999161
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    ||||||||||||||||||||||  ||||  |||||||||||||||||    
T  999115 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgca 999161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 4692487 - 4692433
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||||||||    
T  4692487 ggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcacccc 4692433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 22149630 - 22149580
Alignment:
Q  396 ttaattgcacttttccccct-atctttt-gctaattgtgcgattttgcacc 444  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  22149630 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 28633720 - 28633774
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||| ||||||||||||||    
T  28633720 ggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcacccc 28633774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 17518530 - 17518481
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccc 445  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  17518530 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 17518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 39690794 - 39690847
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||| |||||||||| |||||||| ||| || ||||||||||||||||||||    
T  39690794 ggcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 444
Target Start/End: Original strand, 42611188 - 42611237
Alignment:
Q  396 ttaattgcacttttccccct-atcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||||| ||  ||||| |||||||||||||||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacc 42611237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 443
Target Start/End: Original strand, 46823841 - 46823894
Alignment:
Q  391 atggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcac 443  Q
    |||| ||||||||||||||||||| |||  ||||| ||||||||||||||||||    
T  46823841 atggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 46823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 446
Target Start/End: Complemental strand, 6002946 - 6002894
Alignment:
Q  395 cttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||  |||||||||||   |||||||||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcacccc 6002894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 50429656 - 50429708
Alignment:
Q  393 ggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||| |||||||||| | ||  |||||||||||||||||||||||||    
T  50429656 ggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacc 50429708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 391 - 490
Target Start/End: Complemental strand, 6752 - 6653
Alignment:
Q  391 atggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccc 489  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||         ||||||||||||||| |||||||||||||||    
T  6752 atggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgccccc 6654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 6394 - 6448
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6394 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 6448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 6623 - 6575
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcacc 444  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  6623 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 10039676 - 10039732
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccctct 449  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10039676 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccctct 10039732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 21031979 - 21032076
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||         ||||||||||||||| ||||||||||||||||    
T  21031979 ggcttaattgcacttttccccctaacttttgctaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgccccct 21032076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 3403716 - 3403771
Alignment:
Q  392 tggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3403716 tggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 490
Target Start/End: Complemental strand, 3404043 - 3403945
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||         ||||||||||||||| ||||||||||||||||    
T  3404043 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgccccct 3403945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 3825530 - 3825580
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3825530 ttaattgcacttttccccctatattttgctaattgtgcgattttgcacccc 3825580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 30388061 - 30388111
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30388061 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 30388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 13579704 - 13579651
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  13579704 ggcttaattgcacttttctccctatcgtttgctaattgtgcgattttgcacccc 13579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 490
Target Start/End: Complemental strand, 31598326 - 31598229
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    |||||||||| | ||||||| |||||||||||||||||||||||||||||||| |||         |||| |||||||||| ||||||||||||||||    
T  31598326 ggcttaattgtatttttccctctatcttttgctaattgtgcgattttgcacccttcttttttttttgagcaattttgcaccccatctttttgccccct 31598229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 11656837 - 11656782
Alignment:
Q  392 tggcttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  11656837 tggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcacccc 11656782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 18241849 - 18241908
Alignment:
Q  388 aaaatggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  18241849 aaaaaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18241908  T

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Target: chr6; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 33828989 - 33829044
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  33828989 tggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 31598778 - 31598732
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  31598778 ttaattgcacttttccccctatcttttgttaattgtgcgattttgca 31598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 33829690 - 33829636
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  33829690 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 33655168 - 33655115
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  33655168 ggcttaattgcacttgtccccttatcttttgctaattgtgcaattttgcacccc 33655115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 446
Target Start/End: Complemental strand, 30388402 - 30388362
Alignment:
Q  406 ttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30388402 ttttccccctatcttttgctaattgtgcgattttgcacccc 30388362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 446
Target Start/End: Original strand, 33971983 - 33972047
Alignment:
Q  383 taattaaaat-ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||| |||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||    
T  33971983 taattaaaattggcttaattgcagtttttcccctatcttttgttaattgtacgattttgcacccc 33972047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 21032334 - 21032285
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgc 441  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  21032334 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 21032285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 446
Target Start/End: Original strand, 23250582 - 23250645
Alignment:
Q  382 ataattaaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||| ||||||||||||||||| |||||||||||||  ||||||| ||| |||||||||    
T  23250582 ataattaaaa-ggcttaattgcactttttcccctatcttttgtcaattgtgagatcttgcacccc 23250645  T

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Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 446
Target Start/End: Original strand, 2762611 - 2762661
Alignment:
Q  398 aattgcactttt-ccccctatctttt-gctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacccc 2762661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 10039893 - 10039843
Alignment:
Q  398 aattgcactttt-ccccctatctttt-gctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacccc 10039843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 10087920 - 10087858
Alignment:
Q  385 attaaaatggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| ||||||||||||||||||||| ||||| |  ||||| |||||||||||||||||||||    
T  10087920 attataatggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcacccc 10087858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 22684412 - 22684358
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||    
T  22684412 tggcttaattgcacttttccccttatagtttgccaattgtgtgattttgcacccc 22684358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 22754656 - 22754710
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||    
T  22754656 tggcttaattgcacttttccccttatagtttgccaattgtgtgattttgcacccc 22754710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 29074430 - 29074372
Alignment:
Q  388 aaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| ||||||||||| |||| ||||||||  ||||| |||||||||||||||||||||    
T  29074430 aaaaaggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29074372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 29079194 - 29079136
Alignment:
Q  388 aaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| ||||||||||| |||| ||||||||  ||||| |||||||||||||||||||||    
T  29079194 aaaaaggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29079136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 29107003 - 29106945
Alignment:
Q  388 aaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| ||||||||||| |||| ||||||||  ||||| |||||||||||||||||||||    
T  29107003 aaaaaggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29106945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 442
Target Start/End: Original strand, 12714436 - 12714481
Alignment:
Q  398 aattgcactttt-ccccctatcttttgctaattgtgcgattttgca 442  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttgca 12714481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 23250945 - 23250892
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||| |||||||||||  |||||||||||||||||||||||| |||| |||||    
T  23250945 ggcttgattgcactttttgccctatcttttgctaattgtgcgaatttgtacccc 23250892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 18242211 - 18242112
Alignment:
Q  392 tggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccc 489  Q
    ||||||||||||| ||||   ||||||||||||| ||||||||||||||||| |||||||         ||||||||||||||| |||||||||||||||    
T  18242211 tggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgccccc 18242113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 446
Target Start/End: Complemental strand, 33974355 - 33974299
Alignment:
Q  391 atggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||| ||||||||| |||  ||||| |||||||||||||||||||||    
T  33974355 atggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 33974299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 7654602 - 7654548
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||    
T  7654602 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 7654548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 446
Target Start/End: Original strand, 11656608 - 11656658
Alignment:
Q  398 aattgcactttt-ccccctatc-ttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  11656608 aattgcacttttgccccctatcgttttgataattgtgcgattttgcacccc 11656658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 490
Target Start/End: Original strand, 2762501 - 2762581
Alignment:
Q  410 ccccctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||| || |||||||||||||||||||||||| |||||||         ||| ||||||||||||||||||||||||||||    
T  2762501 cccccaattttttgctaattgtgcgattttgcaccccctct-ttttttttgagtgattttgcacctcatctttttgccccct 2762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 23250821 - 23250772
Alignment:
Q  396 ttaattgcacttttccccctatcttttgct-aattgtgcgattttgcacc 444  Q
    |||||||||||||| ||||||| ||||| | |||||||||||||||||||    
T  23250821 ttaattgcacttttacccctatattttggttaattgtgcgattttgcacc 23250772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 3403915 - 3403867
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcacc 444  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  3403915 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 11656535 - 11656567
Alignment:
Q  413 cctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||||| |||||||||||||||    
T  11656535 cctatcttttgctaattatgcgattttgcaccc 11656567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 30388290 - 30388242
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcacc 444  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  30388290 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 8e-22; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 3930533 - 3930480
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3930533 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 3930480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 16555872 - 16555773
Alignment:
Q  392 tggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcacccc-tctcnnnnnnnngagcgattttgcacctcatctttttgccccc 489  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||         ||||||||||||||| |||||||||||||||    
T  16555872 tggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatct-ttttttttgagcgattttgcaccccatctttttgccccc 16555774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 35393834 - 35393776
Alignment:
Q  388 aaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  35393834 aaaaaggcttaattgcacttttcaccctatcttttgctaattgtgcgaatttgcacccc 35393776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 13198965 - 13198906
Alignment:
Q  388 aaaatggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  13198965 aaaaaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 13198906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 16555515 - 16555569
Alignment:
Q  393 ggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  16555515 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 16555569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 18077256 - 18077202
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18077256 ggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcacccc 18077202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 50678779 - 50678833
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  50678779 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 50678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 56505693 - 56505747
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  56505693 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 56505747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 11241714 - 11241661
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  11241714 ggcttaattgtacttttccccctatcttttgccaattgtgggattttgcacccc 11241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 8488534 - 8488482
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| || |||||||| |||||||||||||||||||||||    
T  8488534 gcttaattgcacttttcgccttatctttttctaattgtgcgattttgcacccc 8488482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 22681576 - 22681628
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  22681576 gcttaattgcactttcccccctatcttttgtcaattgtgcgattttgcacccc 22681628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 24775842 - 24775783
Alignment:
Q  388 aaaatggcttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  24775842 aaaaaggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcacccc 24775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 36095812 - 36095871
Alignment:
Q  388 aaaatggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  36095812 aaaaaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 36095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 36096526 - 36096475
Alignment:
Q  396 ttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 36096475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 50679479 - 50679424
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||    
T  50679479 tggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcacccc 50679424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 3930178 - 3930232
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||||||||||  ||||| ||||||||||||||||    
T  3930178 tggcttaattgcactttttcccctatcttttattaattatgcgattttgcacccc 3930232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 27304717 - 27304770
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  27304717 tggcttaattgcccttttcccc-tatcttctgctaattgtgcgattttgcacccc 27304770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 446
Target Start/End: Complemental strand, 49178866 - 49178816
Alignment:
Q  397 taattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcacccc 49178816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 5206287 - 5206231
Alignment:
Q  389 aaatggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  5206287 aaatggcttaattgcacttttcccccttatctttt-ttaattgtgcgattttgcaccc 5206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 443
Target Start/End: Complemental strand, 7603475 - 7603422
Alignment:
Q  390 aatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcac 443  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||||||    
T  7603475 aatggcttaattgcactttttcccctatctttttacaattgtgcgattttgcac 7603422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 22681942 - 22681881
Alignment:
Q  384 aattaaaatggcttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||  |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  22681942 aattaaataggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 26207361 - 26207414
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  26207361 ggcttaattgcactttcccccctatagtttgccaattgtgcgattttgcacccc 26207414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 490
Target Start/End: Original strand, 13198606 - 13198702
Alignment:
Q  396 ttaattgcacttttccccct-atcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||| || | ||||||||| ||||||||||||||||| |||||||         ||||||||||||||| ||||||||||||||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccccatctttttgccccct 13198702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 4239421 - 4239366
Alignment:
Q  392 tggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  4239421 tggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 4239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 8182227 - 8182172
Alignment:
Q  393 ggcttaattgcacttttc-cccctatctttt-gctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  8182227 ggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcacccc 8182172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 11241388 - 11241439
Alignment:
Q  392 tggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgca 442  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||||||||    
T  11241388 tggcttaattgcacttttcctccttatcttttgttaattgtgcgattttgca 11241439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 32703705 - 32703650
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  32703705 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 406 - 445
Target Start/End: Complemental strand, 54509155 - 54509116
Alignment:
Q  406 ttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  54509155 ttttccccctattttttgctaattgtgcgattttgcaccc 54509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 5205988 - 5206042
Alignment:
Q  393 ggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||||||| |||||  |||||||||||||||    
T  5205988 ggcttaattgcacttttcctccctatcttttgttaatttggcgattttgcacccc 5206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 8181992 - 8182046
Alignment:
Q  394 gcttaattgcactttt-ccccctatc-ttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacccc 8182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 9023244 - 9023298
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||    
T  9023244 ggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcacccc 9023298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 27304943 - 27304893
Alignment:
Q  398 aattgcactttt-ccccctatctttt-gctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcacccc 27304893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 28196346 - 28196400
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  28196346 ggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcacccc 28196400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 28196827 - 28196773
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  28196827 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 28196773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 43051306 - 43051252
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||    
T  43051306 ggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcacccc 43051252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 11529169 - 11529222
Alignment:
Q  394 gcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||| ||||||| ||||||| |||||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcacccc 11529222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 23539841 - 23539893
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  23539841 ggcttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcacccc 23539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 25161879 - 25161932
Alignment:
Q  394 gcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25161932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 39415244 - 39415277
Alignment:
Q  412 ccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||||||||||||||||||||||    
T  39415244 ccctatcttttgctaattgtgcgattttgcaccc 39415277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 47219252 - 47219203
Alignment:
Q  396 ttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||    
T  47219252 ttaattgcatttttcacctctatcttttgctaattgtgcgattttgcacc 47219203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 48405962 - 48406015
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||  ||||| |||| ||| ||||||||||||    
T  48405962 ggcttaattgcacttttccccctatagtttgccaattatgcaattttgcacccc 48406015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 449
Target Start/End: Original strand, 49178644 - 49178697
Alignment:
Q  398 aattgcactttt-ccccctatctttt-gctaattgtgcgattttgcacccctct 449  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  49178644 aattgcacttttgccccctatctttttgccaattgtgcgattttgcacccctct 49178697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 169013 - 169068
Alignment:
Q  393 ggcttaattgcacttttc--cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||  |||||||  ||||| |||||||||||||||||||||    
T  169013 ggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcacccc 169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 7603146 - 7603197
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||| ||||||||  ||||||||| ||||||||||||    
T  7603146 gcttaattgcacttttcccc-tatctttttttaattgtgcaattttgcacccc 7603197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 16555743 - 16555695
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 443
Target Start/End: Complemental strand, 5206185 - 5206138
Alignment:
Q  398 aattgcactt-ttccccctatctttt-gctaattgtgcgattttgcac 443  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  5206185 aattgcacttcttccccctatctttttgctaattgtgcgattttgcac 5206138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 9380795 - 9380744
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcac 443  Q
    |||||||||||||||||||||| |||  ||||| ||||||||||||||||||    
T  9380795 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 9380744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 23540308 - 23540253
Alignment:
Q  391 atggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||||||||| |||||||  ||||  ||||||||||||||||||||    
T  23540308 atggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccc 23540253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 32703220 - 32703279
Alignment:
Q  388 aaaatggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| ||||||||||||||||| ||||||||  ||||| |||||||||||| ||||||||    
T  32703220 aaaaaggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcacccc 32703279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 39086680 - 39086625
Alignment:
Q  390 aatggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||||||||||||| ||| |||  ||||| |||||||||||||||||||    
T  39086680 aatggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacc 39086625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 39415578 - 39415523
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccct 447  Q
    ||||||| ||||||||| ||| |||||||||||||||||||| |||||||| ||||    
T  39415578 ggcttaactgcactttttccctctatcttttgctaattgtgcaattttgcatccct 39415523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 43050610 - 43050661
Alignment:
Q  396 ttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||  ||||||||||| | |||||||||||||||||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 43050661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 293271 - 293217
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  293271 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 293217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 9023734 - 9023680
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||    
T  9023734 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 9023680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 9380307 - 9380361
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||| ||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 9380361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 26207800 - 26207746
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||||||| |||  ||||| |||||||||||||||||||||    
T  26207800 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 26207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 39744519 - 39744465
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||    
T  39744519 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 39744465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 45830250 - 45830196
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||| ||||||||| |||||||||||||  |||||||||||||| ||||||    
T  45830250 ggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacacccc 45830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 433
Target Start/End: Original strand, 49178532 - 49178574
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgc 433  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  49178532 tggcttaattgcacttttctcccatatcttttgctaattgtgc 49178574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 25225452 - 25225399
Alignment:
Q  393 ggcttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||| |  | |||||||||||| ||||||||||||||||||||    
T  25225452 ggcttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 449
Target Start/End: Original strand, 35393604 - 35393657
Alignment:
Q  398 aattgcactttt-ccccctatctttt-gctaattgtgcgattttgcacccctct 449  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  35393604 aattgaacttttgccccctatctttttgctaattgtgcgattttgcactcctct 35393657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 48406435 - 48406386
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||| ||||| ||||||||  ||||| ||||||||||||||||||||    
T  48406435 ttaattgtactttcccccctataatttgccaattgtgcgattttgcaccc 48406386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 54508815 - 54508868
Alignment:
Q  393 ggcttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||||| || || ||||||||| ||||||| ||||||||||||    
T  54508815 ggcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccc 54508868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 447
Target Start/End: Original strand, 8488211 - 8488243
Alignment:
Q  415 tatcttttgctaattgtgcgattttgcacccct 447  Q
    ||||||||| |||||||||||||||||||||||    
T  8488211 tatcttttgttaattgtgcgattttgcacccct 8488243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 35393489 - 35393529
Alignment:
Q  402 gcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    ||||||||||||| || |||||||||||||| |||||||||    
T  35393489 gcacttttcccccgattttttgctaattgtgtgattttgca 35393529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 440
Target Start/End: Complemental strand, 56506628 - 56506580
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttg 440  Q
    |||||||||||||||||| ||| |||||||||| |||||||| ||||||    
T  56506628 ggcttaattgcacttttcacccttatcttttgccaattgtgcaattttg 56506580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 8e-22; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 47871175 - 47871122
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47871175 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 47871122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 20969074 - 20968976
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |         ||||||||||||||| ||||||||||||||||    
T  20969074 tggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccct-ttttttttttgagcgattttgcaccccatctttttgccccct 20968976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 391 - 449
Target Start/End: Complemental strand, 42627601 - 42627543
Alignment:
Q  391 atggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccctct 449  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  42627601 atggcttaattgcacttttccctctatcttttgctaattgtgtgattttgcatccctct 42627543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 390 - 446
Target Start/End: Original strand, 17372295 - 17372352
Alignment:
Q  390 aatggcttaattgcac-ttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  17372295 aatggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcacccc 17372352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 447
Target Start/End: Complemental strand, 9027087 - 9027032
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccct 447  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||    
T  9027087 tggcttaatttcacttttccccctatcttttgctaattgtgcaattttacacccct 9027032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 10293964 - 10293909
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10293964 tggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 10293909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 446
Target Start/End: Original strand, 42672976 - 42673031
Alignment:
Q  391 atggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  42672976 atggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 42673031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 14016014 - 14015964
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  14016014 ttaattgcacttttcatcctatcttttgctaattgtgcgattttgcacccc 14015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 18875245 - 18875191
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcacccc 18875191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 18874882 - 18874935
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18874882 ggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 45060925 - 45060872
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  45060925 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccc 45060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 447
Target Start/End: Original strand, 47870823 - 47870878
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcg-attttgcacccct 447  Q
    ||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  47870823 ggcttaattgcactttttcccctatcttttgctaattatgcgaattttgcacccct 47870878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 3353127 - 3353181
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  3353127 tggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 3353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 20968718 - 20968772
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  20968718 ggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcacccc 20968772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 21896569 - 21896511
Alignment:
Q  388 aaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| |||| ||||||| |||||  |||||||||||||||||||||    
T  21896569 aaaatggcttaattgcattttttcccctatattttgtcaattgtgcgattttgcacccc 21896511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 24485514 - 24485460
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||    
T  24485514 tggcttaattgcacttttctccctatagtttgccaattgtgcgattttgcacccc 24485460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 42673350 - 42673296
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  42673350 tggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 42673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 45060594 - 45060644
Alignment:
Q  391 atggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttg 440  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  45060594 atggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 446
Target Start/End: Original strand, 13657434 - 13657499
Alignment:
Q  382 ataattaaaatggcttaattgcacttttcccccta-tcttttgctaattgtgcgattttgcacccc 446  Q
    |||| ||||||||||||||| |||||||| ||||| | |||||| |||||||||||||||||||||    
T  13657434 ataaataaaatggcttaattacacttttctccctatttttttgccaattgtgcgattttgcacccc 13657499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 447
Target Start/End: Complemental strand, 17372645 - 17372593
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccct 447  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  17372645 gcttaattgcacttttcccc-tatattttactaattgtgcgattttgcacccct 17372593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 40848521 - 40848574
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||    
T  40848521 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttacacccc 40848574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 8315135 - 8315083
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  8315135 ggcttaattgcactttcccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 490
Target Start/End: Original strand, 10293603 - 10293706
Alignment:
Q  388 aaaatggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgc 485  Q
    ||||||||||||||||| ||||  |||||||||||||  ||||||||||||||||| |||||||         ||||||||||||||| |||||||||||    
T  10293603 aaaatggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgc 10293701  T
Q  486 cccct 490  Q
    |||||    
T  10293702 cccct 10293706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 3644838 - 3644783
Alignment:
Q  392 tggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  3644838 tggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcacccc 3644783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 447
Target Start/End: Original strand, 9026739 - 9026790
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccct 447  Q
    ||||||||| |||||| ||||||||||| ||||||||| |||||||||||||    
T  9026739 ttaattgcatttttcctcctatcttttgttaattgtgcaattttgcacccct 9026790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 439
Target Start/End: Complemental strand, 26540915 - 26540876
Alignment:
Q  400 ttgcacttttccccctatcttttgctaattgtgcgatttt 439  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  26540915 ttgcacctttccccctatcttttgctaattgtgcgatttt 26540876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 47666394 - 47666335
Alignment:
Q  388 aaaatggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| |||||||  ||||| |||||||| ||||||||||||    
T  47666394 aaaatggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcacccc 47666335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 1927771 - 1927825
Alignment:
Q  392 tggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||| ||||||| ||||||||||| |||| |||||||||||||||    
T  1927771 tggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 1928484 - 1928434
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||| ||| | ||||||||||||| |||||||||||||||||||||    
T  1928484 ttaattgcattttcctccctatcttttgccaattgtgcgattttgcacccc 1928434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 8314012 - 8314066
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||    
T  8314012 tggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcaccc 8314066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 449
Target Start/End: Complemental strand, 23630086 - 23630032
Alignment:
Q  396 ttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcacccctct 449  Q
    |||||||||||||| || ||||| ||||| |||||||||||||||||||||||||    
T  23630086 ttaattgcactttttcctcctattttttggtaattgtgcgattttgcacccctct 23630032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 40849015 - 40848961
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  40849015 ggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 40848961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 48159897 - 48159951
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  48159897 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 48159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 1101235 - 1101182
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||| |||||    
T  1101235 ggcttaattgcacttttcccccttatcttttgctttttgtgcgatttttcaccc 1101182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 4947263 - 4947312
Alignment:
Q  397 taattgcacttttc-cccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccc 4947312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 3353597 - 3353553
Alignment:
Q  400 ttgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||    
T  3353597 ttgcacttttccccctatagtttgccaattgtgcgattttgcacc 3353553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 444
Target Start/End: Original strand, 18875017 - 18875065
Alignment:
Q  398 aattgcactttt-ccccctatctttt-gctaattgtgcgattttgcacc 444  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 22429159 - 22429211
Alignment:
Q  394 gcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||||| ||||||| |||||| |||||||||| |||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcaccc 22429211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 1100917 - 1100968
Alignment:
Q  395 cttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||| |||||    
T  1100917 cttaattgcacttatccaccctatcttttgcaaattgtgcgatttttcaccc 1100968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 1101141 - 1101090
Alignment:
Q  396 ttaattgcacttttccccctatc-ttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||| |||||||| |||||  |||||||||||||||||||||    
T  1101141 ttaattgcacttttgcccctatctttttgtcaattgtgcgattttgcacccc 1101090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 443
Target Start/End: Original strand, 9026860 - 9026907
Alignment:
Q  398 aattgcactttt-ccccctatctttt-gctaattgtgcgattttgcac 443  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  9026860 aattgcacttttgccccctatctttttgctaattgtgcgattttgcac 9026907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 449
Target Start/End: Complemental strand, 13657673 - 13657618
Alignment:
Q  396 ttaattgcacttttc-cccctatctttt-gctaattgtgcgattttgcacccctct 449  Q
    ||||||||||||||  |||||||||||| || ||||||||||||||||||||||||    
T  13657673 ttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccctct 13657618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 17441117 - 17441066
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcac 443  Q
    |||||||||||| |||||| | |||||||||| |||||||||||||||||||    
T  17441117 ggcttaattgcatttttcctctctatcttttgttaattgtgcgattttgcac 17441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 27238951 - 27238900
Alignment:
Q  396 ttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 27238900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 48160388 - 48160333
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||| |||  ||||| |||||||||||||||||||||    
T  48160388 tggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcacccc 48160333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 443
Target Start/End: Complemental strand, 53688357 - 53688306
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcac 443  Q
    |||||||||||||||||  |||||||  ||||| ||||||||||||||||||    
T  53688357 tggcttaattgcactttctcccctatagtttgccaattgtgcgattttgcac 53688306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 446
Target Start/End: Complemental strand, 22429658 - 22429596
Alignment:
Q  384 aattaaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||| || |||||||||||||| || |||||  ||||  |||||||||||||||||||||    
T  22429658 aattaaattgacttaattgcactttccctcctatagtttgtcaattgtgcgattttgcacccc 22429596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 24485017 - 24485075
Alignment:
Q  388 aaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||| |||||| || |||||| |||||  ||||| |||||||||||||||||||||    
T  24485017 aaaatggtttaattacatttttcctcctatagtttgccaattgtgcgattttgcacccc 24485075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 26540694 - 26540744
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||| ||||||| |||||  |||||||| ||||||||||||    
T  26540694 ttaattgcacttttgcccctattttttgtcaattgtgcaattttgcacccc 26540744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 36181044 - 36180990
Alignment:
Q  393 ggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| ||||||  |||| |||||||||||||||| |||||    
T  36181044 ggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtacccc 36180990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 53687888 - 53687942
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  53687888 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 53687942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 20968946 - 20968897
Alignment:
Q  398 aattgcacttttccccct-atc-ttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  20968946 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 20968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 26007182 - 26007235
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||| ||||||||  ||||  |||||||||||||||||||||    
T  26007182 ggcttaattgcattttcccccctatagtttgtcaattgtgcgattttgcacccc 26007235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 27238465 - 27238518
Alignment:
Q  393 ggcttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||| ||||||||| |||||  ||||| ||||||||||||||||||||    
T  27238465 ggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccc 27238518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 53766633 - 53766580
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||||||| |||||||  ||||| |||||||| |||||||||||    
T  53766633 ggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccc 53766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 3644772 - 3644720
Alignment:
Q  396 ttaattgcacttttcccc-ctatctt-ttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||| ||| ||||| | ||||||||||||||||||||||||||    
T  3644772 ttaattgcacttttgccctctatcctcttgctaattgtgcgattttgcacccc 3644720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 17440763 - 17440806
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgatt 437  Q
    |||||||||||||||| || |||||| ||||||||||||||||||    
T  17440763 ggcttaattgcacttt-cctcctatcatttgctaattgtgcgatt 17440806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 21895657 - 21895712
Alignment:
Q  393 ggcttaattgcacttttccccc--tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||  ||| |||||| ||||||| |||||||||||||    
T  21895657 ggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcacccc 21895712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 44008455 - 44008403
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||||  |||||  ||||| |||||||| ||||||||||    
T  44008455 tggcttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacc 44008403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 3687711 - 3687613
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||        ||||||||||||||| ||||||||||||||||    
T  3687711 tggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc-ctcttttttttgagcgattttgcaccccatctttttgccccct 3687613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 23686420 - 23686473
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  23686420 tggcttaattgcacttttccccctatcttttgctaattgtacaattttgcaccc 23686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 35079959 - 35080012
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  35079959 tggcttaattgcacttttccccctatcttttgctaattgtggggttttgcaccc 35080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 6908213 - 6908265
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  6908213 ggcttaattgcacttttccccctatctattgttaattgtgcgattttgcaccc 6908265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 8953941 - 8953889
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  8953941 gcttaattgcacttttccccctatcttttgttaattgtgcaattttgcacccc 8953889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 490
Target Start/End: Complemental strand, 9412379 - 9412281
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||         ||||||||||||||| ||||||||||||||||    
T  9412379 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgccccct 9412281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 13772956 - 13772901
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  13772956 tggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcacccc 13772901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 44599488 - 44599543
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  44599488 tggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44599543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 9412023 - 9412077
Alignment:
Q  393 ggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  9412023 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 9412077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 13772641 - 13772695
Alignment:
Q  393 ggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  13772641 ggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcacccc 13772695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 44600189 - 44600135
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  44600189 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 3687352 - 3687408
Alignment:
Q  392 tggcttaattgcacttttcccc--ctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  3687352 tggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcacccc 3687408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 446
Target Start/End: Complemental strand, 5349787 - 5349733
Alignment:
Q  390 aatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  5349787 aatggcttaattgcacttt--cccctatcttttgttaattgtgcgattttgcacccc 5349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  6908534 ttaattgcactttcccccctattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 23686771 - 23686715
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccctct 449  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  23686771 ggcttaattgcactttttccccctatcttttgctaattgtgcgattttg-acccctct 23686715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 440
Target Start/End: Original strand, 27096046 - 27096094
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttg 440  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  27096046 tggcttaattgcactttcccccctatattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 440
Target Start/End: Complemental strand, 27182257 - 27182209
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttg 440  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  27182257 tggcttaattgcactttcccccctatattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 446
Target Start/End: Original strand, 48359318 - 48359373
Alignment:
Q  391 atggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  48359318 atggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 48359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 5735253 - 5735303
Alignment:
Q  394 gcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcac 443  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttgcac 5735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 13863313 - 13863367
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  13863313 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 13863367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 446
Target Start/End: Complemental strand, 9035350 - 9035293
Alignment:
Q  390 aatggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  9035350 aatggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 13744286 - 13744233
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  13744286 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 13744233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 444
Target Start/End: Original strand, 18925061 - 18925114
Alignment:
Q  392 tggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  18925061 tggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 18925373 - 18925322
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  18925373 gcttaattgcacttttcctc-tatattttgctaattgtgcgattttgcacccc 18925322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 27096398 - 27096346
Alignment:
Q  390 aatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    ||||| ||||||||||||||||||||||||||||  ||||||| |||||||||    
T  27096398 aatggtttaattgcacttttccccctatcttttgtcaattgtgtgattttgca 27096346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 27181905 - 27181957
Alignment:
Q  390 aatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    ||||| ||||||||||||||||||||||||||||  ||||||| |||||||||    
T  27181905 aatggtttaattgcacttttccccctatcttttgtcaattgtgtgattttgca 27181957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 18864455 - 18864404
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||| ||||||||||||||  ||||| |||||||||||||||||||    
T  18864455 ggcttaattgtacttttccccctatagtttgccaattgtgcgattttgcacc 18864404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 442
Target Start/End: Original strand, 33628397 - 33628444
Alignment:
Q  395 cttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||    
T  33628397 cttaattgcacttttctccttatcttttgctaattgtgcaattttgca 33628444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 37888832 - 37888887
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  37888832 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37888887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 3204668 - 3204721
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  3204668 tggcttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcacccc 3204721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 8643820 - 8643766
Alignment:
Q  393 ggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||  ||||||||||| | |||||||||||||||||||||    
T  8643820 ggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 8643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 10533034 - 10533088
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  10533034 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 10533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 13864010 - 13863964
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattt 438  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  13864010 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattt 13863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 22740641 - 22740591
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  22740641 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 22740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 33628714 - 33628660
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| |||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  33628714 ggctaaattgcactttttccctctatcttttactaattgtgcgattttgcacccc 33628660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 37889313 - 37889259
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  37889313 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 37972450 - 37972396
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  37972450 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 42419079 - 42419029
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||  ||||| ||||||||| |||||||||||    
T  42419079 ttaattgcacttttccccctatagtttgccaattgtgcgtttttgcacccc 42419029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 446
Target Start/End: Original strand, 29291808 - 29291860
Alignment:
Q  395 cttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||| | |||||||||||| ||||| ||||||||||||||||    
T  29291808 cttaattgcactttttctccctatcttttgataattatgcgattttgcacccc 29291860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 446
Target Start/End: Complemental strand, 34236010 - 34235978
Alignment:
Q  414 ctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||||||||||    
T  34236010 ctatcttttgctaattgtgcgattttgcacccc 34235978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 446
Target Start/End: Complemental strand, 35080263 - 35080223
Alignment:
Q  406 ttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  35080263 ttttccccttatcttttgttaattgtgcgattttgcacccc 35080223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 444
Target Start/End: Original strand, 38191387 - 38191435
Alignment:
Q  397 taattgcacttttccccctatc-ttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  38191387 taattgcactttttcccctatctttttgccaattgtgcgattttgcacc 38191435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 18863962 - 18864021
Alignment:
Q  388 aaaatggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||| |||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  18863962 aaaatggtttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 18864021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 20418891 - 20418942
Alignment:
Q  396 ttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 20418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 20419383 - 20419324
Alignment:
Q  388 aaaatggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||    
T  20419383 aaaaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 20419324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 29292096 - 29292041
Alignment:
Q  392 tggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||  || ||| |||||||||||||||||||||| ||||||    
T  29292096 tggcttaattgcacttttttcctctaacttttgctaattgtgcgattttccacccc 29292041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 3205147 - 3205093
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||    
T  3205147 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 3205093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 9034867 - 9034921
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||| ||||||||    
T  9034867 ggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccc 9034921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 17156967 - 17157021
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  17156967 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 17157021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 449
Target Start/End: Complemental strand, 18925280 - 18925226
Alignment:
Q  397 taattgcactttt-ccccctatctttt-gctaattgtgcgattttgcacccctct 449  Q
    |||||| |||||| ||||||||||||| || ||||||||||||||||||||||||    
T  18925280 taattgaacttttgccccctatctttttgccaattgtgcgattttgcacccctct 18925226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 22740156 - 22740210
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  22740156 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 22740210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 29292922 - 29292972
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgca 442  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||||    
T  29292922 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 29292972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 36527387 - 36527437
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||| |||||||  ||||  |||||||||||||||||||||    
T  36527387 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcacccc 36527437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 37971960 - 37972014
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||| |  ||||| |||||||||||||||||||||    
T  37971960 ggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcacccc 37972014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 38191620 - 38191566
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||| ||||  ||||||||||||| ||||| |||||||||||||||    
T  38191620 tggcttaattgcattttttacccctatcttttgttaattatgcgattttgcaccc 38191566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 46816365 - 46816311
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||| ||||||||| | |||| ||||||||||||||||    
T  46816365 ggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcacccc 46816311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 5735598 - 5735553
Alignment:
Q  396 ttaattgcactttt-ccccctatcttttgctaattgtgcgattttg 440  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||    
T  5735598 ttaattgcactttttccccctatcttttattaattgtgcgattttg 5735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 6908440 - 6908391
Alignment:
Q  398 aattgcactttt-ccccctatctttt-gctaattgtgcgattttgcaccc 445  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  6908440 aattgcgcttttaccccctatctttttgctaattgtgcgattttgcaccc 6908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 39983700 - 39983753
Alignment:
Q  394 gcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||| ||||||||  ||||| |||||||| |||||||    
T  39983700 gcttaattgcacttttcccccttatcttttattaattatgcgatttcgcacccc 39983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 15567019 - 15567047
Alignment:
Q  419 ttttgctaattgtgcgattttgcacccct 447  Q
    |||||||||||||||||||||||||||||    
T  15567019 ttttgctaattgtgcgattttgcacccct 15567047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 443
Target Start/End: Complemental strand, 29293401 - 29293349
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcac 443  Q
    ||||||||||||| ||||||||| |||  ||||| ||||||||||||||||||    
T  29293401 tggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcac 29293349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 40017495 - 40017447
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||| |||||||||||||||||||  |||||||| |||||| ||||    
T  40017495 ttaattgtacttttccccctatcttttattaattgtgtgattttacacc 40017447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 440
Target Start/End: Original strand, 42418591 - 42418639
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttg 440  Q
    ||||||||| |||||||||||| |||  |||||||||||||||||||||    
T  42418591 ggcttaatttcacttttcccccctatagtttgctaattgtgcgattttg 42418639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 490
Target Start/End: Complemental strand, 45860 - 45763
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||         ||||||||||||||| ||||||||||||||||    
T  45860 ggcttaattgcacttttccccctatcttttgccaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgccccct 45763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 45537 - 45587
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcac 443  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45537 ggcttaattgcacttttccccctatcttttgttaattgtgcgattttgcac 45587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 22428934 - 22428987
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22428934 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 22428987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 22429249 - 22429196
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22429249 ggcttaattgcatttttccccctatcttttgctaattgtgcgattttgcacccc 22429196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 490
Target Start/End: Original strand, 18433014 - 18433113
Alignment:
Q  392 tggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc-tctcnnnnnnnngagcgattttgcacctcatctttttgccccc 489  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||         ||||||||||||||| |||||||||||||||    
T  18433014 tggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatct-ttttttttgagcgattttgcaccccatctttttgccccc 18433112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 26020450 - 26020548
Alignment:
Q  393 ggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc-tctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||         ||||||||||||||| ||||||||||||||||    
T  26020450 ggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccatct-ttttttttgagcgattttgcaccgcatctttttgccccct 26020548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 391 - 446
Target Start/End: Complemental strand, 34577219 - 34577164
Alignment:
Q  391 atggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  34577219 atggcttaattgcactttttcccctatcttttgctaattgtgtgattttgcacccc 34577164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 490
Target Start/End: Original strand, 34576870 - 34576963
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||  ||        ||||||||||||||| ||||||||||||||||    
T  34576870 ttaattgcactttcccccctatcttttgctaattgtgcgattttacacccc-atcttttttttgagcgattttgcaccccatctttttgccccct 34576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 41383220 - 41383166
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccct 447  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  41383220 ggcttaattgaacttttccccctattttttgctaattgtgcgattttgcacccct 41383166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 23011078 - 23011131
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  23011078 tggcttaattgcatttttccccttatcttttgctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 18817666 - 18817611
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  18817666 tggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18817611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 18433370 - 18433316
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  18433370 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18433316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 25115757 - 25115855
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||  |         ||||||||||||||| ||||||||||||||||    
T  25115757 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccct 25115855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 25116115 - 25116061
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  25116115 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25116061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 25174849 - 25174947
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||  |         ||||||||||||||| ||||||||||||||||    
T  25174849 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccct 25174947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 25175205 - 25175151
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  25175205 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25175151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 9665880 - 9665828
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  9665880 tggcttaattccacttttccccctatcttttgctaattgtgc-attttgcaccc 9665828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 22729492 - 22729440
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  22729492 gcttaattgcacttttccccctataatttgccaattgtgcgattttgcacccc 22729440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 444
Target Start/End: Original strand, 31569910 - 31569958
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  31569910 ttaattgcacttttccccctatcttttgtcaattgtgcgattttgcacc 31569958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 9665560 - 9665609
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  9665560 ttaattgcacttttcccc-tatcttttgctaattgtgcaattttgcacccc 9665609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 12441365 - 12441320
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattt 438  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  12441365 tggcttaattgcacttttcccc-tatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 16466796 - 16466746
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgca 442  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  16466796 ggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 18816952 - 18817006
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  18816952 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 18817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 23011432 - 23011383
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  23011432 ttaattgcactttttcccttatcttttgttaattgtgcgattttgcaccc 23011383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 37610202 - 37610255
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||  ||||| ||||||| |||||||||||||    
T  37610202 ggcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 37610255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 37780320 - 37780373
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||  ||||| ||||||| |||||||||||||    
T  37780320 ggcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 37780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 41382896 - 41382945
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||| ||| |||||||||||||| |||||||||||||||||||||    
T  41382896 ttaattgcattttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 37610672 - 37610620
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||| ||||| ||||||||  |||||||||||||||||||||||||    
T  37610672 tggcttaattgtactttcccccctatagtttgctaattgtgcgattttgcacc 37610620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 11351478 - 11351427
Alignment:
Q  396 ttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcacccc 11351427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 443
Target Start/End: Original strand, 22729007 - 22729058
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcac 443  Q
    ||||||||||||||||||||||||||  ||||  ||||||||||||||||||    
T  22729007 tggcttaattgcacttttccccctatagtttgtaaattgtgcgattttgcac 22729058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 43464245 - 43464194
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||||||||    
T  43464245 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacc 43464194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 5187884 - 5187830
Alignment:
Q  393 ggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||    
T  5187884 ggcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcacccc 5187830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 12498567 - 12498621
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  12498567 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 12498982 - 12498928
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  12498982 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 16726084 - 16726130
Alignment:
Q  399 attgcactttt-ccccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacc 16726130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 26571218 - 26571164
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  26571218 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 26571164  T

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Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 43463759 - 43463809
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  43463759 ttaattgcacttttccccttatagtttgccaattgtgcgattttgcacccc 43463809  T

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Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 19514520 - 19514580
Alignment:
Q  388 aaaatggcttaattgcacttttccccc--tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||| |||||  |||  ||||| |||||||||||||||||||||    
T  19514520 aaaatggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcacccc 19514580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 37780797 - 37780744
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||| ||||||||||| |||  |||||||||||||||||||||||||    
T  37780797 tggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacc 37780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 2817626 - 2817582
Alignment:
Q  395 cttaattgcacttttccccctatcttttgctaattgtgcgatttt 439  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||    
T  2817626 cttaattgcacttttccccctatagtttgcgaattgtgcgatttt 2817582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 444
Target Start/End: Original strand, 12441041 - 12441093
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||||||||||  |||||||||||  ||||||||| ||||||||||    
T  12441041 tggcttaattgcacttttttccctatcttttattaattgtgcaattttgcacc 12441093  T

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Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 446
Target Start/End: Original strand, 21207224 - 21207280
Alignment:
Q  391 atggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| ||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  21207224 atggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 21207280  T

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Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 5187546 - 5187605
Alignment:
Q  388 aaaatggcttaattgcact-tttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| |||||||||| ||| ||| ||||||| |||||||||| |||||||||||||||||    
T  5187546 aaaaaggcttaattgtactcttttcccctattttttgctaatcgtgcgattttgcacccc 5187605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 9869563 - 9869611
Alignment:
Q  396 ttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  9869563 ttaattgcacttttcctccctat--tttgctaattgtgcgattttgcaccc 9869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 10098991 - 10098941
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| |||||  ||||  |||||||||||||||||||||    
T  10098991 ttaattgcacttttcctcctatagtttgtcaattgtgcgattttgcacccc 10098941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 11350808 - 11350861
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||    
T  11350808 ggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcacccc 11350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 19515017 - 19514963
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||    
T  19515017 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 19514963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 33324892 - 33324838
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||  |||||||||||||  ||||||| |||||||||||||    
T  33324892 ggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacccc 33324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 41383100 - 41383048
Alignment:
Q  396 ttaattgcacttttccccctatctttt---gctaattgtgcgattttgcaccc 445  Q
    ||||||||||||| |||||||| ||||   |||||||||||||||||||||||    
T  41383100 ttaattgcactttcccccctattttttttggctaattgtgcgattttgcaccc 41383048  T

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Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 445
Target Start/End: Original strand, 25115885 - 25115934
Alignment:
Q  398 aattgcacttttccccct-atc-ttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  25115885 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 445
Target Start/End: Original strand, 25174977 - 25175026
Alignment:
Q  398 aattgcacttttccccct-atc-ttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  25174977 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 443
Target Start/End: Original strand, 34576991 - 34577040
Alignment:
Q  396 ttaattgcacttttccccct-atctttt-gctaattgtgcgattttgcac 443  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  34576991 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 34577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 42919299 - 42919356
Alignment:
Q  387 taaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||| ||||||||||| ||||| ||||||| |||| | |||||||||||||| ||||    
T  42919299 taaaaaggcttaattgctctttttcccctatatttttccaattgtgcgatttttcacc 42919356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 444
Target Start/End: Original strand, 18433143 - 18433191
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcacc 444  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  18433143 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 34147564 - 34147512
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||||||||| ||||||||  ||||  |||||||||||||||||||    
T  34147564 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacc 34147512  T

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Target: scaffold0015 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 17210 - 17158
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17210 tggcttaattgcacttttccccctatcttttgctaattgtgcaattttgcacc 17158  T

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Target: scaffold0015; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 16852 - 16905
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  16852 tggcttaattgc-ctttttcccctatcttttgctaattgtgcgattatgcacccc 16905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 8e-19; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 444
Target Start/End: Original strand, 6171155 - 6171207
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6171155 tggcttaattgcacttttccccctatcttttgttaattgtgcgattttgcacc 6171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 11883623 - 11883721
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||         |||| |||||||||||||||||||||||||||    
T  11883623 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctct-ttttttttgagcaattttgcacctcatctttttgccccct 11883721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 11883981 - 11883926
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11883981 tggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 11883926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 24832331 - 24832429
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc-tctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||         ||||||||||||||| ||||||||||||||||    
T  24832331 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatct-ttttttttgagcgattttgcaccccatctttttgccccct 24832429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 449
Target Start/End: Complemental strand, 26737836 - 26737778
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccctct 449  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  26737836 tggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccctct 26737778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 392 - 449
Target Start/End: Original strand, 40221312 - 40221369
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccctct 449  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  40221312 tggcttaattgcacctttccccctatcttttgctaattgttcgattttgcacctctct 40221369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 490
Target Start/End: Complemental strand, 40469780 - 40469685
Alignment:
Q  396 ttaattgcactttt-ccccctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||         ||||||||||||||| ||||||||||||||||    
T  40469780 ttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgccccct 40469685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 446
Target Start/End: Original strand, 18055050 - 18055100
Alignment:
Q  395 cttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18055050 cttaattgcacttttcccccta-cttttgctaattgtgcgattttgcacccc 18055100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 30190923 - 30191021
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||         ||||||||||||||| ||||||||||||||||    
T  30190923 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgccccct 30191021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 2639536 - 2639482
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  2639536 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 2639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 490
Target Start/End: Complemental strand, 6171510 - 6171413
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||         |||| |||||||||| ||||||||||||||||    
T  6171510 ggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccctct-ttttttttgagcaattttgcaccccatctttttgccccct 6171413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 18296747 - 18296693
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  18296747 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 20347518 - 20347464
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20347518 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20347464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 26737477 - 26737534
Alignment:
Q  388 aaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  26737477 aaaaaggcttaattgcacttttctcc-tatcttttgctaattgtgcgattttgcacccc 26737534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 26841587 - 26841641
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  26841587 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26841641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 32673193 - 32673143
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  32673193 ttaattgcactttttcccctatcttttgccaattgtgcgattttgcacccc 32673143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 43495659 - 43495562
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||| ||| |||        ||||||||||||||| ||||||||||| ||||    
T  43495659 tggcttaattgcactttcccacctatattttgctaattgtgcgattttgcatccc-ctcttttttttgagcgattttgcaccccatctttttgcgccct 43495562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 20347163 - 20347220
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccctct 449  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  20347163 ggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccctct 20347220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 17346088 - 17346037
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  17346088 ggcttaattgcactttttcctttatcttttgctaattgtgcgattttgcacc 17346037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 26842293 - 26842238
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  26842293 tggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26842238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 30191280 - 30191225
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  30191280 tggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcacccc 30191225  T

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Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 40469426 - 40469481
Alignment:
Q  392 tggcttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  40469426 tggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcacccc 40469481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 2638820 - 2638874
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  2638820 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 2638874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 444
Target Start/End: Complemental strand, 6495780 - 6495723
Alignment:
Q  388 aaaatggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||| ||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  6495780 aaaaaggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 7980056 - 7980003
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| || ||||  |||||||||||||||||||||||||||    
T  7980056 ggcttaattgcactttttcctctatagtttgctaattgtgcgattttgcacccc 7980003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 446
Target Start/End: Original strand, 17345729 - 17345785
Alignment:
Q  389 aaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  17345729 aaatggtttaattgcacttttcccc-tatcttttgctaattatgcaattttgcacccc 17345785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 18296077 - 18296130
Alignment:
Q  394 gcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 7591204 - 7591255
Alignment:
Q  396 ttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 7591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 15920781 - 15920832
Alignment:
Q  396 ttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttgcacccc 15920832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 17850977 - 17851032
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  17850977 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 17851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 381 - 446
Target Start/End: Original strand, 37720191 - 37720258
Alignment:
Q  381 cataattaaa-atggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||| | |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  37720191 cataattaaataaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37720258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 43495309 - 43495356
Alignment:
Q  393 ggcttaattgcacttttccc-cctatcttttgctaattgtgcgatttt 439  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  43495309 ggcttaattgcacttttcccacctatattttgctaattgtgcgatttt 43495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 43495535 - 43495484
Alignment:
Q  396 ttaattgcacttttccccctatc-ttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  43495535 ttaattgcacttttccccctatctttttgtcaattgtgcgattttgcacccc 43495484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 5378661 - 5378715
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  5378661 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 5378715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 41790966 - 41790912
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||||||| ||||    
T  41790966 ggcttaattgcacttttcccccctatattttgccaattgtgcgattttgcccccc 41790912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  398 aattgcactttt-ccccctatctttt-gctaattgtgcgattttgcaccc 445  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 6495468 - 6495519
Alignment:
Q  394 gcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  6495468 gcttaattgcacttttcctccctatcttt-gttaattgtgcgattttgcaccc 6495519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 446
Target Start/End: Original strand, 16910825 - 16910881
Alignment:
Q  391 atggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||| | |  ||||| |||||||||||||||||||||    
T  16910825 atggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcacccc 16910881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 16911321 - 16911269
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||  |||||||  ||||| |||||||||||||||||||||    
T  16911321 gcttaattgcactttcgcccctatagtttgccaattgtgcgattttgcacccc 16911269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 18750178 - 18750126
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||| |||||||||  ||||  |||||||||||||||||||||    
T  18750178 gcttaattgcacttctccccctatagtttgtcaattgtgcgattttgcacccc 18750126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 40469655 - 40469607
Alignment:
Q  398 aattgcacttttccccct-atc-ttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 7664728 - 7664673
Alignment:
Q  392 tggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||| ||||||  ||||  |||||||||||||||||||||    
T  7664728 tggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 7664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 8851151 - 8851202
Alignment:
Q  396 ttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 8851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 442
Target Start/End: Original strand, 15321394 - 15321440
Alignment:
Q  395 cttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  15321394 cttaattgcacttttcccc-tatcttttgttaattgtgcaattttgca 15321440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 26692871 - 26692820
Alignment:
Q  396 ttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 26692820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 40221538 - 40221487
Alignment:
Q  398 aattgcactttt-ccccctatctttt-gctaattgtgcgattttgcacccct 447  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||||||||||    
T  40221538 aattgcgcttttgccccctatctttttgctaattgtgcgattttgcacccct 40221487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 446
Target Start/End: Original strand, 41790489 - 41790544
Alignment:
Q  391 atggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||| ||||||||| ||||||||||||  ||||  |||||||||||||||||||||    
T  41790489 atggtttaattgcatttttccccctatagtttgtcaattgtgcgattttgcacccc 41790544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 5380013 - 5379959
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||  ||| | |||||||||||||||||||||    
T  5380013 ggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcacccc 5379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 444
Target Start/End: Complemental strand, 6325399 - 6325349
Alignment:
Q  395 cttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||||| |||  ||||| |||||||||||||||||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 6325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 8851636 - 8851582
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||  ||||  |||||||||||||||||||||    
T  8851636 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 8851582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 32672841 - 32672895
Alignment:
Q  392 tggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||||||   ||| |||||||| |||||||||||||||||||||    
T  32672841 tggcttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccc 32672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 38490899 - 38490845
Alignment:
Q  388 aaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    ||||||||||||||||||||| | ||||||  ||| | |||||||||||||||||    
T  38490899 aaaatggcttaattgcactttcctccctatagtttaccaattgtgcgattttgca 38490845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 32673069 - 32673020
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccc 445  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  32673069 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 32673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 444
Target Start/End: Original strand, 11883751 - 11883799
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcacc 444  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  11883751 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 29230282 - 29230334
Alignment:
Q  393 ggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||||||||||| | ||||||||||  ||||||| |||||||||||    
T  29230282 ggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 391 - 446
Target Start/End: Complemental strand, 7655 - 7600
Alignment:
Q  391 atggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  7655 atggcttaattgcactttttcccctatcttttgctaattgtgcgattttgtacccc 7600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 7455 - 7508
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  7455 ggcttaattgcactttttcccctatcttttgctaattatgcgattttgcacccc 7508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 3e-18; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 438929 - 438984
Alignment:
Q  392 tggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  438929 tggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 438984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 439253 - 439203
Alignment:
Q  393 ggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgca 442  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  439253 ggcttaattgcactttttccccttatcttttgctaattgtgcgattttgca 439203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 183367 - 183416
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  183367 ttaattgcacttttccccctatcttttgtcaattgtacgattttgcaccc 183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 490
Target Start/End: Complemental strand, 183721 - 183619
Alignment:
Q  388 aaaatggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgc 485  Q
    |||| |||||||||||||||||||||| ||| ||||||||||||||||| |||||| |||||||         ||||||||||||||| |||||||||||    
T  183721 aaaaaggcttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctcttctttatttgagcgattttgcacc-catctttttgc 183624  T
Q  486 cccct 490  Q
    |||||    
T  183623 cccct 183619  T

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Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 16929297 - 16929242
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16929297 tggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcacccc 16929242  T

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Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 13936723 - 13936776
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  13936723 ggcttaattgcacttttccccctatcttttaccaattgtgcgattttgcacccc 13936776  T

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Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 447
Target Start/End: Original strand, 74688 - 74740
Alignment:
Q  395 cttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccct 447  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  74688 cttaattgcacttttccctccatcttttgctaattgtgcgattttgcacccct 74740  T

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Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 490
Target Start/End: Original strand, 12281119 - 12281222
Alignment:
Q  388 aaaatggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacc-cctctcnnnnnnnngagcgattttgcacctcatctttttgc 485  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||         ||||||||||||||| |||||||||||    
T  12281119 aaaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctct-ttttttttgagcgattttgcaccccatctttttgc 12281217  T
Q  486 cccct 490  Q
    |||||    
T  12281218 cccct 12281222  T

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Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 41662458 - 41662359
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccc 489  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||         ||||||||||||||| |||||||||||||||    
T  41662458 tggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctct-tttttattgagcgattttgcaccccatctttttgccccc 41662360  T

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Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 444
Target Start/End: Original strand, 43162233 - 43162285
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  43162233 tggcttaattgcacttttccccctatattttgttaattgtgcgattttgcacc 43162285  T

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Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 490
Target Start/End: Original strand, 43245870 - 43245969
Alignment:
Q  392 tggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccc 489  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||         ||||||||||||||| |||||||||||||||    
T  43245870 tggcttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctct-tttttattgagcgattttgcaccccatctttttgccccc 43245968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 12281481 - 12281426
Alignment:
Q  392 tggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  12281481 tggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 12281426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 37752083 - 37752138
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  37752083 tggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcacccc 37752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 37752471 - 37752416
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  37752471 tggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 37752416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 39724103 - 39724048
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  39724103 tggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 39724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 442
Target Start/End: Original strand, 7127660 - 7127702
Alignment:
Q  400 ttgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7127660 ttgcacttttccccctatcttttgctaattgtgcgattttgca 7127702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 9823415 - 9823361
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  9823415 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 9823361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 15155883 - 15155937
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  15155883 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 15155937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 16928942 - 16928996
Alignment:
Q  393 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  16928942 ggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcacccc 16928996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 34313764 - 34313817
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  34313764 tggcttaattgcacttttcccc-tatcttttgttaattgtgcgattttgcacccc 34313817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 43246230 - 43246176
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  43246230 ggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcacccc 43246176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 490
Target Start/End: Original strand, 765736 - 765832
Alignment:
Q  395 cttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||         ||||||||||||||| ||||||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgccccct 765832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 13026635 - 13026687
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  13026635 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 13026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 13027332 - 13027281
Alignment:
Q  396 ttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 13027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 15156240 - 15156185
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  15156240 tggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacccc 15156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 22851389 - 22851444
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  22851389 tggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 22851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 446
Target Start/End: Complemental strand, 23123567 - 23123517
Alignment:
Q  395 cttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  23123567 cttaattgcacttt-ccccttatcttttgctaattgtgcgattttgcacccc 23123517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 3464000 - 3463946
Alignment:
Q  392 tggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  3464000 tggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 41662107 - 41662161
Alignment:
Q  393 ggcttaattgcac-ttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  41662107 ggcttaattgcacattttccccatatcttttgttaattgtgcgattttgcacccc 41662161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 18020140 - 18020088
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  18020140 ggcttaattgcacttttaccc-tatcttttgttaattgtgcgattttgcacccc 18020088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 446
Target Start/End: Complemental strand, 43162588 - 43162539
Alignment:
Q  397 taattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  43162588 taattgcacttttccccctatcttttgtcaatcgtgcgattttgcacccc 43162539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 490
Target Start/End: Complemental strand, 75016 - 74941
Alignment:
Q  414 ctatcttttgctaattgtgcgattttgcacccctctcnnnnnnnngagcgattttgcacctcatctttttgccccct 490  Q
    ||||||||||||||||||||||||||||||||| |||         |||||||||||||| ||||||||||||||||    
T  75016 ctatcttttgctaattgtgcgattttgcacccc-ctctttttttttagcgattttgcaccccatctttttgccccct 74941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 432
Target Start/End: Complemental strand, 767759 - 767720
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtg 432  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  767759 ggcttaattgcacttttccccctatcttttgttaattgtg 767720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 9822747 - 9822802
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  9822747 tggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcacccc 9822802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 443
Target Start/End: Original strand, 11007562 - 11007613
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcac 443  Q
    |||||||||| || ||||||  ||||||||||||||||||||||||||||||    
T  11007562 tggcttaattacatttttcctgctatcttttgctaattgtgcgattttgcac 11007613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 23123337 - 23123392
Alignment:
Q  392 tggcttaattgcacttttccc-cctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||| ||||||    
T  23123337 tggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacacccc 23123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 7127973 - 7127923
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaa-ttgtgcgattttgcaccc 445  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  7127973 ttaattgcacttttttccctatcttttgctaatttgtgcgattttgcaccc 7127923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 34498609 - 34498555
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  34498609 ggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcacccc 34498555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 445
Target Start/End: Complemental strand, 43598790 - 43598756
Alignment:
Q  411 cccctatcttttgctaattgtgcgattttgcaccc 445  Q
    |||||||||||||||||||||||||||||||||||    
T  43598790 cccctatcttttgctaattgtgcgattttgcaccc 43598756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 3463642 - 3463694
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||| || |||||||||||||||||| ||||||||| ||||||||||||    
T  3463642 ggcttaattaca-ttttccccctatcttttgttaattgtgcaattttgcacccc 3463694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 6092777 - 6092825
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  6092777 ggcttaattgca-ttttccccctatcttttgtcaattgtgcgattttgca 6092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 444
Target Start/End: Original strand, 22786843 - 22786892
Alignment:
Q  396 ttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  22786843 ttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 33747984 - 33748033
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgca 442  Q
    |||||||||||||||||  || |||||||||||||||||| |||||||||    
T  33747984 ggcttaattgcacttttttccatatcttttgctaattgtgtgattttgca 33748033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 446
Target Start/End: Original strand, 25438794 - 25438846
Alignment:
Q  395 cttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25438846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 41662521 - 41662573
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||||||| |||  ||||| |||||||||||||||||||    
T  41662521 ggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 41662573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 3307337 - 3307388
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgca 442  Q
    ||||||||||||| ||||| |||||||||||||  |||||||||||||||||    
T  3307337 tggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgca 3307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 446
Target Start/End: Complemental strand, 9623941 - 9623882
Alignment:
Q  387 taaaatggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||  |||||  ||||| ||| ||| |||||||||||||    
T  9623941 taaaatggcttaattgcacttttcatcctatagtttgccaatcgtgtgattttgcacccc 9623882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 9930885 - 9930842
Alignment:
Q  400 ttgcacttttccccctatcttttgctaattgtgcgattttgcac 443  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||    
T  9930885 ttgcactttcccccttatcttttgttaattgtgcgattttgcac 9930842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 24473342 - 24473397
Alignment:
Q  392 tggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||||||  ||||| ||||||| |||||||||||||    
T  24473342 tggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcacccc 24473397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 37397200 - 37397145
Alignment:
Q  392 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| |||||||  ||||| |||||||||||||||| ||||    
T  37397200 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 37397145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 446
Target Start/End: Complemental strand, 37670306 - 37670256
Alignment:
Q  395 cttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| ||||||| |||| ||||||||| ||||||||||||    
T  37670306 cttaattgcacttttctccctatc-tttgttaattgtgcaattttgcacccc 37670256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 9465607 - 9465653
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgatttt 439  Q
    ||||||||||||||||||| |||||||||||  |||||||| |||||    
T  9465607 ggcttaattgcacttttcctcctatcttttgtcaattgtgcaatttt 9465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 446
Target Start/End: Original strand, 9465700 - 9465750
Alignment:
Q  398 aattgcactttt-ccccctatctttt-gctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  9465700 aattgcacttttgccccctatctttttgctaactgtgcgattttgcacccc 9465750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 446
Target Start/End: Complemental strand, 9465908 - 9465874
Alignment:
Q  412 ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||||||||||||||||||||    
T  9465908 ccctatcttttgttaattgtgcgattttgcacccc 9465874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 13937443 - 13937389
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| ||||||| |||||  |||||||||| ||||||||||    
T  13937443 ggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcacccc 13937389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 15042148 - 15042198
Alignment:
Q  396 ttaattgcacttttccccct-atcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||| |||||| ||||||||| ||||||| ||||||||||||    
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccc 15042198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 446
Target Start/End: Original strand, 18019915 - 18019965
Alignment:
Q  398 aattgcactttt-ccccctatcttttgc-taattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcacccc 18019965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 24473822 - 24473768
Alignment:
Q  393 ggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||  ||||||  ||||| |||||||||||||||||||||    
T  24473822 ggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcacccc 24473768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 25439176 - 25439126
Alignment:
Q  396 ttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||| |||||||  ||||  |||||||||||||||||||||    
T  25439176 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcacccc 25439126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 37396708 - 37396762
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||||||  |||||  ||||||||||||||||||||    
T  37396708 ggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcacccc 37396762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 15156111 - 15156062
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccc 445  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  15156111 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 15156062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 444
Target Start/End: Original strand, 16169173 - 16169225
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||||||||||||||||||  |||||  ||||| |||||||| ||||||||||    
T  16169173 tggcttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacc 16169225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 444
Target Start/End: Complemental strand, 22851990 - 22851958
Alignment:
Q  412 ccctatcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||||| |||||||||||||||||||    
T  22851990 ccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 444
Target Start/End: Original strand, 37752242 - 37752290
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcacc 444  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  37752242 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 37752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 25423 - 25369
Alignment:
Q  393 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25423 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 25369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 25295 - 25247
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcacc 444  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  25295 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 25247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 205687 - 205740
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  205687 ggcttaattgcatttttctccctatcttttgctaattgtgcgattttgcacccc 205740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 1475 - 1376
Alignment:
Q  392 tggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgca-cccctctcnnnnnnnngagcgattttgcacctcatctttttgccccc 489  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||         ||||||||||||||| |||||||||||||||    
T  1475 tggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctct-ttttttttgagcgattttgcaccccatctttttgccccc 1377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 1117 - 1172
Alignment:
Q  392 tggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  1117 tggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcacccc 1172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 1346 - 1297
Alignment:
Q  398 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccc 445  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  1346 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 50561 - 50507
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  50561 tggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 50507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 444
Target Start/End: Complemental strand, 1839 - 1786
Alignment:
Q  391 atggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 444  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1839 atggtttaattgcacttttccccctatcttttgtttattgtgcgattttgcacc 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 1510 - 1564
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| || ||||||||||| ||||||| |||||||||||||    
T  1510 tggcttaattgcactttttcctctatcttttgccaattgtgtgattttgcacccc 1564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 411923 - 411976
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  411923 ggcttaattgcactttaccccctatcttttgtcaattgtgcgattttgcacccc 411976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 6151 - 6206
Alignment:
Q  392 tggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||| ||||||    
T  6151 tggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacacccc 6206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 6849 - 6795
Alignment:
Q  393 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 6795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 817 - 763
Alignment:
Q  392 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||||||||||    
T  817 tggcttaattgcactttttcccctatagtttgccaattgtgcgattttgcacccc 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 6927 - 6877
Alignment:
Q  394 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccc 445  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  6927 gcttaattgcactttcccccctatcttttgccaattgtgc-attttgcaccc 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 449
Target Start/End: Original strand, 6609 - 6664
Alignment:
Q  395 cttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccctct 449  Q
    |||||||||||| |||||| |||||||||| |||||||| ||||||||||| ||||    
T  6609 cttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacctctct 6664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 185329 - 185274
Alignment:
Q  392 tggcttaattgcacttttcc-ccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||    
T  185329 tggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacccc 185274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 10012 - 10062
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgca 442  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||||||    
T  10012 ggcttaattgcacttttgccccctatcttttgccaattgtacgattttgca 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 38749 - 38695
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  38749 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 38695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 19621 - 19674
Alignment:
Q  393 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 446  Q
    |||||||||||| |||||||| |||  ||||| |||||||||||||||||||||    
T  19621 ggcttaattgcaattttccccatatagtttgccaattgtgcgattttgcacccc 19674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 444
Target Start/End: Original strand, 72967 - 73018
Alignment:
Q  394 gcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcacc 444  Q
    ||||||||||| |||||||| | |||||||||||||||||| ||||||||||    
T  72967 gcttaattgcatttttcccctttatcttttgctaattgtgcaattttgcacc 73018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 9905 - 9959
Alignment:
Q  393 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 446  Q
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T  9905 ggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccc 9959  T

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