View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5489_low_22 (Length: 294)

Name: NF5489_low_22
Description: NF5489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5489_low_22
NF5489_low_22
[»] chr1 (53 HSPs)
chr1 (210-275)||(47177737-47177801)
chr1 (210-275)||(47180088-47180152)
chr1 (210-275)||(23786214-23786278)
chr1 (209-271)||(9459276-9459337)
chr1 (209-271)||(9463103-9463164)
chr1 (210-271)||(16226547-16226607)
chr1 (209-271)||(16231942-16232003)
chr1 (210-271)||(24326041-24326101)
chr1 (210-271)||(51757913-51757973)
chr1 (227-271)||(51750417-51750461)
chr1 (209-271)||(39932453-39932515)
chr1 (210-271)||(2949079-2949140)
chr1 (222-271)||(23816263-23816312)
chr1 (222-271)||(47906644-47906693)
chr1 (228-276)||(20291830-20291878)
chr1 (228-271)||(13447133-13447176)
chr1 (228-271)||(13762214-13762257)
chr1 (228-271)||(15294694-15294737)
chr1 (210-271)||(16429326-16429387)
chr1 (212-269)||(25251123-25251180)
chr1 (222-271)||(39462895-39462945)
chr1 (228-269)||(13358954-13358995)
chr1 (222-271)||(46431559-46431608)
chr1 (222-269)||(6995551-6995599)
chr1 (231-271)||(10399690-10399730)
chr1 (228-276)||(20302815-20302863)
chr1 (228-271)||(2617896-2617939)
chr1 (222-276)||(18839956-18840011)
chr1 (228-271)||(28842872-28842915)
chr1 (229-271)||(31735383-31735425)
chr1 (227-271)||(27336800-27336845)
chr1 (222-271)||(31490285-31490334)
chr1 (209-269)||(40134319-40134379)
chr1 (208-264)||(15916768-15916823)
chr1 (228-271)||(50078653-50078697)
chr1 (228-271)||(2510202-2510245)
chr1 (213-271)||(9240937-9240995)
chr1 (227-265)||(31424878-31424917)
chr1 (209-271)||(50248416-50248478)
chr1 (228-271)||(51752747-51752789)
chr1 (210-271)||(3579431-3579491)
chr1 (210-264)||(8348905-8348958)
chr1 (222-271)||(11457333-11457383)
chr1 (210-271)||(28206912-28206973)
chr1 (222-271)||(31422717-31422767)
chr1 (222-271)||(50307400-50307450)
chr1 (227-271)||(12302367-12302412)
chr1 (227-271)||(15823923-15823968)
chr1 (227-271)||(27338991-27339036)
chr1 (227-263)||(2232872-2232908)
chr1 (227-263)||(9526743-9526778)
chr1 (227-263)||(13785123-13785159)
chr1 (210-265)||(25248398-25248453)
[»] chr8 (35 HSPs)
chr8 (207-275)||(24873036-24873103)
chr8 (209-275)||(43082403-43082468)
chr8 (210-275)||(43080032-43080096)
chr8 (222-271)||(28283073-28283122)
chr8 (227-271)||(22684509-22684553)
chr8 (228-271)||(15809652-15809695)
chr8 (209-271)||(33541254-33541316)
chr8 (209-271)||(44721277-44721338)
chr8 (222-271)||(18811142-18811191)
chr8 (210-270)||(3874428-3874487)
chr8 (227-271)||(28251427-28251471)
chr8 (227-271)||(43530549-43530593)
chr8 (228-271)||(4424453-4424496)
chr8 (228-271)||(32339744-32339787)
chr8 (210-271)||(14477679-14477740)
chr8 (222-271)||(3883447-3883496)
chr8 (222-269)||(15073143-15073191)
chr8 (210-269)||(15956384-15956443)
chr8 (209-271)||(18813316-18813377)
chr8 (210-271)||(21482737-21482798)
chr8 (228-269)||(27827421-27827463)
chr8 (228-269)||(27829732-27829774)
chr8 (227-271)||(14808190-14808235)
chr8 (210-269)||(183251-183310)
chr8 (228-271)||(609171-609214)
chr8 (209-271)||(13858333-13858395)
chr8 (227-273)||(27911504-27911551)
chr8 (227-273)||(27957923-27957970)
chr8 (210-263)||(17982967-17983021)
chr8 (222-271)||(41383093-41383143)
chr8 (233-269)||(27106769-27106806)
chr8 (226-263)||(30423489-30423525)
chr8 (228-276)||(31162634-31162683)
chr8 (222-269)||(15068413-15068461)
chr8 (210-269)||(15185564-15185623)
[»] scaffold0472 (1 HSPs)
scaffold0472 (210-275)||(6582-6646)
[»] chr7 (47 HSPs)
chr7 (210-275)||(1606763-1606827)
chr7 (210-271)||(25542916-25542976)
chr7 (210-271)||(38394374-38394434)
chr7 (210-275)||(40550213-40550277)
chr7 (222-271)||(9027045-9027094)
chr7 (210-271)||(20297750-20297810)
chr7 (210-275)||(22137463-22137527)
chr7 (210-271)||(28485953-28486013)
chr7 (222-271)||(28487941-28487990)
chr7 (210-275)||(40552490-40552554)
chr7 (227-275)||(7349134-7349182)
chr7 (227-275)||(7351508-7351556)
chr7 (227-271)||(7471837-7471881)
chr7 (227-271)||(40836600-40836644)
chr7 (228-275)||(2935653-2935700)
chr7 (228-271)||(38397027-38397070)
chr7 (229-271)||(36017-36059)
chr7 (229-271)||(1850369-1850411)
chr7 (222-271)||(11759515-11759564)
chr7 (210-271)||(20299848-20299908)
chr7 (227-271)||(1046774-1046818)
chr7 (228-271)||(1502832-1502875)
chr7 (210-268)||(13099317-13099375)
chr7 (228-271)||(48458041-48458084)
chr7 (229-271)||(44952-44994)
chr7 (222-271)||(20626421-20626470)
chr7 (222-271)||(20630312-20630361)
chr7 (222-271)||(20642731-20642780)
chr7 (230-271)||(40946718-40946759)
chr7 (227-271)||(1049146-1049190)
chr7 (209-264)||(25276513-25276567)
chr7 (228-271)||(43253374-43253417)
chr7 (228-269)||(7092070-7092112)
chr7 (222-260)||(31153702-31153740)
chr7 (222-271)||(7469875-7469923)
chr7 (222-265)||(4295792-4295836)
chr7 (233-269)||(18345931-18345967)
chr7 (228-271)||(24748973-24749017)
chr7 (228-271)||(31434910-31434954)
chr7 (212-271)||(3036112-3036170)
chr7 (244-275)||(22108453-22108484)
chr7 (229-271)||(3878967-3879009)
chr7 (228-265)||(7094317-7094355)
chr7 (210-271)||(21678445-21678506)
chr7 (222-271)||(42223539-42223589)
chr7 (233-269)||(44724963-44725000)
chr7 (208-271)||(21680411-21680474)
[»] chr6 (36 HSPs)
chr6 (210-275)||(12195354-12195418)
chr6 (210-275)||(26065961-26066025)
chr6 (210-275)||(26068235-26068299)
chr6 (209-271)||(4816070-4816131)
chr6 (209-271)||(29754548-29754609)
chr6 (210-271)||(8717195-8717255)
chr6 (228-275)||(33309266-33309313)
chr6 (228-275)||(33311535-33311582)
chr6 (210-271)||(11982872-11982932)
chr6 (210-271)||(26932403-26932463)
chr6 (227-271)||(5273072-5273116)
chr6 (227-271)||(18322506-18322550)
chr6 (228-271)||(2628743-2628786)
chr6 (209-271)||(19704402-19704464)
chr6 (227-269)||(26065397-26065439)
chr6 (227-269)||(26085366-26085408)
chr6 (231-271)||(14507037-14507077)
chr6 (228-276)||(30967609-30967657)
chr6 (228-271)||(28241179-28241222)
chr6 (210-271)||(20915197-20915257)
chr6 (227-271)||(1230105-1230149)
chr6 (227-269)||(30728685-30728728)
chr6 (222-271)||(9020337-9020387)
chr6 (222-271)||(13057598-13057648)
chr6 (210-271)||(15367437-15367498)
chr6 (228-265)||(30034463-30034500)
chr6 (210-273)||(3631784-3631847)
chr6 (222-269)||(15541001-15541049)
chr6 (210-269)||(24338295-24338354)
chr6 (210-271)||(3629711-3629772)
chr6 (222-271)||(15346752-15346802)
chr6 (222-271)||(14458618-14458667)
chr6 (228-267)||(10584355-10584395)
chr6 (222-269)||(13040173-13040221)
chr6 (227-263)||(22351721-22351756)
chr6 (212-271)||(22491018-22491077)
[»] chr5 (46 HSPs)
chr5 (210-275)||(3372977-3373041)
chr5 (209-275)||(23741696-23741761)
chr5 (210-275)||(10750074-10750137)
chr5 (210-275)||(10757550-10757613)
chr5 (210-275)||(15354414-15354478)
chr5 (210-275)||(15356690-15356754)
chr5 (210-275)||(23665420-23665484)
chr5 (210-275)||(23793103-23793167)
chr5 (210-275)||(31179213-31179277)
chr5 (209-271)||(38959971-38960032)
chr5 (210-271)||(2175279-2175341)
chr5 (228-271)||(4410399-4410442)
chr5 (228-271)||(21684310-21684353)
chr5 (228-271)||(34476910-34476953)
chr5 (228-271)||(34479275-34479318)
chr5 (230-271)||(25921333-25921374)
chr5 (210-271)||(31543112-31543172)
chr5 (222-271)||(39798408-39798457)
chr5 (228-271)||(10528955-10528998)
chr5 (228-271)||(38882466-38882509)
chr5 (210-271)||(18467062-18467123)
chr5 (210-271)||(18469387-18469448)
chr5 (210-271)||(27910811-27910872)
chr5 (222-271)||(36402181-36402231)
chr5 (231-271)||(25804402-25804442)
chr5 (228-271)||(4237006-4237049)
chr5 (210-271)||(24127230-24127291)
chr5 (210-271)||(34530559-34530620)
chr5 (210-271)||(41585580-41585641)
chr5 (227-271)||(16776533-16776578)
chr5 (230-271)||(31545461-31545502)
chr5 (227-271)||(15552624-15552668)
chr5 (222-269)||(21289134-21289182)
chr5 (212-271)||(27912914-27912973)
chr5 (233-271)||(21948407-21948446)
chr5 (209-275)||(39854856-39854922)
chr5 (227-269)||(40221904-40221947)
chr5 (228-265)||(10587198-10587236)
chr5 (222-271)||(18597018-18597068)
chr5 (227-271)||(2724266-2724311)
chr5 (229-269)||(18511074-18511115)
chr5 (227-275)||(31465849-31465898)
chr5 (228-271)||(658220-658264)
chr5 (228-271)||(696248-696292)
chr5 (228-271)||(2818194-2818238)
chr5 (228-271)||(17818352-17818396)
[»] chr3 (59 HSPs)
chr3 (210-275)||(10621366-10621430)
chr3 (210-271)||(747117-747177)
chr3 (222-275)||(6065644-6065697)
chr3 (210-275)||(50494353-50494417)
chr3 (210-276)||(28412870-28412935)
chr3 (210-268)||(38210732-38210789)
chr3 (222-271)||(53893904-53893953)
chr3 (228-271)||(456266-456309)
chr3 (228-271)||(458643-458686)
chr3 (228-271)||(5192009-5192052)
chr3 (227-270)||(5886557-5886600)
chr3 (227-270)||(5900030-5900073)
chr3 (209-276)||(9604446-9604512)
chr3 (228-271)||(10084245-10084288)
chr3 (228-271)||(10191168-10191211)
chr3 (228-271)||(10955883-10955926)
chr3 (228-271)||(11168460-11168503)
chr3 (228-271)||(41849411-41849454)
chr3 (229-271)||(38890399-38890441)
chr3 (228-269)||(5522482-5522523)
chr3 (222-275)||(6063294-6063347)
chr3 (227-271)||(25389265-25389309)
chr3 (228-271)||(10958179-10958222)
chr3 (228-271)||(22114159-22114202)
chr3 (222-269)||(25533784-25533831)
chr3 (222-271)||(18099021-18099071)
chr3 (229-271)||(43226435-43226477)
chr3 (229-271)||(43228645-43228687)
chr3 (222-275)||(45883292-45883346)
chr3 (228-271)||(1321837-1321881)
chr3 (231-271)||(4308143-4308183)
chr3 (210-265)||(28181362-28181417)
chr3 (228-271)||(42990657-42990701)
chr3 (209-271)||(24980065-24980127)
chr3 (227-274)||(35917893-35917940)
chr3 (228-271)||(36957660-36957703)
chr3 (210-275)||(3859865-3859930)
chr3 (222-271)||(18096751-18096801)
chr3 (210-271)||(28101848-28101909)
chr3 (210-271)||(28761287-28761348)
chr3 (210-264)||(31151701-31151754)
chr3 (222-271)||(36012182-36012232)
chr3 (227-271)||(32219441-32219486)
chr3 (209-269)||(53915337-53915397)
chr3 (208-271)||(15781232-15781295)
chr3 (231-263)||(27101043-27101075)
chr3 (228-271)||(27635515-27635559)
chr3 (228-264)||(51726863-51726899)
chr3 (222-269)||(53917517-53917565)
chr3 (227-269)||(1313762-1313805)
chr3 (234-269)||(7606465-7606500)
chr3 (228-271)||(11170729-11170772)
chr3 (210-275)||(6484708-6484773)
chr3 (228-271)||(1626543-1626587)
chr3 (208-263)||(17795616-17795671)
chr3 (208-263)||(19104056-19104111)
chr3 (228-271)||(42992739-42992783)
chr3 (222-269)||(43423319-43423367)
chr3 (228-271)||(51674626-51674670)
[»] chr2 (25 HSPs)
chr2 (210-275)||(35215433-35215497)
chr2 (210-275)||(35217810-35217874)
chr2 (210-275)||(45332020-45332084)
chr2 (210-271)||(36558721-36558781)
chr2 (210-271)||(36560981-36561041)
chr2 (228-271)||(19501859-19501902)
chr2 (228-271)||(19504194-19504237)
chr2 (228-271)||(23452094-23452137)
chr2 (228-271)||(42453831-42453874)
chr2 (222-271)||(27105151-27105201)
chr2 (229-271)||(45279860-45279902)
chr2 (210-269)||(11739421-11739480)
chr2 (227-271)||(13909902-13909946)
chr2 (227-269)||(17849468-17849511)
chr2 (227-271)||(19007989-19008034)
chr2 (210-269)||(22287181-22287240)
chr2 (210-269)||(22874460-22874519)
chr2 (231-271)||(24162084-24162124)
chr2 (222-269)||(28196986-28197034)
chr2 (210-276)||(37962791-37962857)
chr2 (210-263)||(5723056-5723110)
chr2 (222-263)||(43623434-43623476)
chr2 (209-271)||(14837617-14837680)
chr2 (239-268)||(42064855-42064884)
chr2 (228-271)||(28459054-28459098)
[»] scaffold0140 (2 HSPs)
scaffold0140 (210-275)||(22500-22564)
scaffold0140 (210-275)||(24775-24839)
[»] chr4 (58 HSPs)
chr4 (210-275)||(16931631-16931695)
chr4 (210-271)||(18847584-18847644)
chr4 (222-275)||(22780223-22780276)
chr4 (227-275)||(22782593-22782641)
chr4 (212-271)||(11435387-11435446)
chr4 (210-271)||(22046526-22046587)
chr4 (210-271)||(11006094-11006154)
chr4 (210-271)||(11008408-11008468)
chr4 (210-271)||(22132229-22132289)
chr4 (210-271)||(22134457-22134517)
chr4 (222-271)||(47868834-47868883)
chr4 (228-271)||(2484731-2484774)
chr4 (228-271)||(5635334-5635377)
chr4 (228-275)||(7941751-7941798)
chr4 (228-271)||(8631276-8631319)
chr4 (228-271)||(9176331-9176374)
chr4 (228-271)||(17662108-17662151)
chr4 (228-271)||(24348633-24348676)
chr4 (210-271)||(22802577-22802638)
chr4 (222-271)||(3937137-3937186)
chr4 (210-271)||(11437795-11437855)
chr4 (210-267)||(16933988-16934044)
chr4 (210-271)||(38409636-38409696)
chr4 (222-275)||(44599691-44599743)
chr4 (227-271)||(22044248-22044292)
chr4 (227-271)||(51015677-51015721)
chr4 (209-271)||(6765274-6765336)
chr4 (228-271)||(9174003-9174046)
chr4 (209-271)||(16455653-16455715)
chr4 (230-269)||(26085836-26085875)
chr4 (228-271)||(31849456-31849499)
chr4 (229-271)||(14633750-14633792)
chr4 (222-271)||(14787285-14787335)
chr4 (222-271)||(14789284-14789334)
chr4 (210-271)||(16453735-16453796)
chr4 (222-271)||(36919440-36919490)
chr4 (222-271)||(36921349-36921399)
chr4 (222-271)||(38928035-38928085)
chr4 (229-271)||(47210655-47210697)
chr4 (227-271)||(18709020-18709064)
chr4 (231-271)||(24889225-24889265)
chr4 (231-271)||(40637505-40637545)
chr4 (227-269)||(3824465-3824508)
chr4 (228-271)||(5198836-5198879)
chr4 (209-271)||(37089211-37089273)
chr4 (210-263)||(2891727-2891780)
chr4 (222-271)||(53405565-53405615)
chr4 (209-269)||(22800704-22800764)
chr4 (209-263)||(27499483-27499537)
chr4 (227-269)||(37312940-37312983)
chr4 (233-271)||(9148667-9148705)
chr4 (220-269)||(33415343-33415393)
chr4 (227-271)||(6133264-6133309)
chr4 (227-271)||(4215730-4215774)
chr4 (227-263)||(4885149-4885185)
chr4 (210-269)||(5101345-5101404)
chr4 (228-271)||(47563186-47563230)
chr4 (222-269)||(49088985-49089033)
[»] scaffold1899 (1 HSPs)
scaffold1899 (212-271)||(2-61)
[»] scaffold0127 (1 HSPs)
scaffold0127 (210-271)||(12715-12775)
[»] scaffold0250 (1 HSPs)
scaffold0250 (228-271)||(3266-3309)
[»] scaffold0131 (1 HSPs)
scaffold0131 (228-271)||(14247-14290)
[»] scaffold0068 (1 HSPs)
scaffold0068 (228-271)||(29557-29600)
[»] scaffold0267 (1 HSPs)
scaffold0267 (229-271)||(413-455)
[»] scaffold0370 (1 HSPs)
scaffold0370 (227-271)||(1309-1353)
[»] scaffold0038 (1 HSPs)
scaffold0038 (228-271)||(41341-41384)
[»] scaffold0031 (1 HSPs)
scaffold0031 (227-273)||(79568-79615)
[»] scaffold0005 (3 HSPs)
scaffold0005 (222-271)||(50396-50446)
scaffold0005 (222-271)||(52395-52445)
scaffold0005 (229-271)||(183500-183542)
[»] scaffold0891 (1 HSPs)
scaffold0891 (210-271)||(4518-4578)
[»] scaffold1674 (1 HSPs)
scaffold1674 (212-260)||(1294-1341)
[»] scaffold0154 (1 HSPs)
scaffold0154 (231-275)||(11335-11379)
[»] scaffold0025 (1 HSPs)
scaffold0025 (228-271)||(69149-69193)
[»] scaffold0011 (1 HSPs)
scaffold0011 (222-269)||(35980-36028)
[»] scaffold0045 (1 HSPs)
scaffold0045 (222-271)||(85612-85662)


Alignment Details
Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 47177801 - 47177737
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47177801 tgttgtgaattc-gatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 47177737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 47180152 - 47180088
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47180152 tgttgtgaattc-gatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 47180088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 23786278 - 23786214
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23786278 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 23786214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 9459276 - 9459337
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9459276 ctgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 9459337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 9463103 - 9463164
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9463103 ctgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 9463164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 16226607 - 16226547
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16226607 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 16226547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 16232003 - 16231942
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  16232003 ctgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaacggataat 16231942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 24326101 - 24326041
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  24326101 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagtaagggataat 24326041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 51757973 - 51757913
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  51757973 tgttgtgaattc-gatgaaaaatgacaccaataacaacttgatgtgtggagcaagggataat 51757913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 51750461 - 51750417
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  51750461 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 51750417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 39932515 - 39932453
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  39932515 ctgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 39932453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 2949079 - 2949140
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  2949079 tgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 2949140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 23816312 - 23816263
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  23816312 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaaggaataat 23816263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 47906693 - 47906644
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  47906693 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaagagataat 47906644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 20291878 - 20291830
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagt 276  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  20291878 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagt 20291830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 13447133 - 13447176
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  13447133 aaaatcacaccaataacaacttgatgtgtggagcaagagataat 13447176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 13762257 - 13762214
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  13762257 aaaatcacaccaataacaacttgatgtgtggagaaagggataat 13762214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 15294694 - 15294737
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  15294694 aaaatcacaccaataacaacttgatgtgtggagcaagagataat 15294737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 16429387 - 16429326
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  16429387 tgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataat 16429326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 25251123 - 25251180
Alignment:
Q  212 ttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  25251123 ttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 25251180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 39462945 - 39462895
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  39462945 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 39462895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 13358995 - 13358954
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggata 269  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  13358995 aaaatcacaccaataacaacttgatgtgtggagtaagggata 13358954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 46431559 - 46431608
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||||||||||| ||||||||| ||||||    
T  46431559 cgatgaaaaatcacaccaataacaacttgatgtttggagcaagagataat 46431608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 6995551 - 6995599
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  6995551 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 6995599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 10399690 - 10399730
Alignment:
Q  231 atcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  10399690 atcacaccaataacaacttgatgtgtggagcaagagataat 10399730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 20302863 - 20302815
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagt 276  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  20302863 aaaatcacaccaataacaacttgatgtctggagcaagagataatcaagt 20302815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 2617939 - 2617896
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  2617939 aaaaccacaccaataacaacttgatgtgtgaagcaagggataat 2617896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 18840011 - 18839956
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagt 276  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  18840011 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagt 18839956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 28842915 - 28842872
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||| |||||||||||||||||||||| ||||||||||    
T  28842915 aaaatcacactaataacaacttgatgtgtggagtaagggataat 28842872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 31735383 - 31735425
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  31735383 aaattacaccaataacaacttgatgtgtggagcaagagataat 31735425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 27336800 - 27336845
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||    
T  27336800 aaaaatcacatcaataacaaacttgatgtgtggagcaagggataat 27336845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 31490334 - 31490285
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||  |||||||||||||||||||| ||||||    
T  31490334 cgatgaaaaatcacaccaatacaaacttgatgtgtggagcaagagataat 31490285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 40134379 - 40134319
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    ||||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||| ||||    
T  40134379 ctgttgtgaattc-gatgaaaaatcacatcaataacaaacttgatgtgtggagcaagtgata 40134319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 15916823 - 15916768
Alignment:
Q  208 gctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaag 264  Q
    |||||||||||||| ||| |||| ||||||||||||  |||||||||||||||||||    
T  15916823 gctgttgtgaattc-gatgaaaagtcacaccaataaatacttgatgtgtggagcaag 15916768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 50078653 - 50078697
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  50078653 aaaatcacaccaataacaaacttgatgtgtggagcaaggaataat 50078697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 2510202 - 2510245
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||| |||| |||||| ||||||    
T  2510202 aaaatcacaccaataacaacttgatatgtgaagcaagagataat 2510245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 9240937 - 9240995
Alignment:
Q  213 tgtgaattccgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    ||||||||| ||| |||||||||||||||||| ||||||| |||||||||||| ||||||    
T  9240937 tgtgaattc-gataaaaaatcacaccaataacaaacttgaagtgtggagcaagtgataat 9240995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 31424878 - 31424917
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagg 265  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  31424878 aaaaatcacaccaataacaaacttgatgtgtggagcaagg 31424917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 50248416 - 50248478
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaactt-gatgtgtggagcaagggataat 271  Q
    ||||||||||||| ||| | |||||||||||||||||| || ||||||||||| ||||||||||    
T  50248416 ctgttgtgaattc-gatgataaatcacaccaataacaaatttgatgtgtggagtaagggataat 50248478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 51752789 - 51752747
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  51752789 aaaatcacaccaataataactt-atgtgtggagcaagggataat 51752747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 3579431 - 3579491
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  3579431 tgttgtgaattc-gatgaaaaa-cacaccaataacaaacttgatgtgtggagcaagtgataat 3579491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 8348905 - 8348958
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaag 264  Q
    |||||||||||| ||| ||||||||||||||||| ||||||| ||||||| ||||    
T  8348905 tgttgtgaattc-gatgaaaaatcacaccaataaaaacttgacgtgtggaacaag 8348958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 11457333 - 11457383
Alignment:
Q  222 cgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||| ||||||||||||| |||||| ||||||    
T  11457333 cgatgaaaaatcacaccaataacaaacttgatgtgtgaagcaagtgataat 11457383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 28206912 - 28206973
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| | ||| |||||||||||||| |||||||||||||||||| ||||||    
T  28206912 tgttgtgaattc-gatgagaaaacacaccaataacaaacttgatgtgtggagcaagtgataat 28206973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 31422717 - 31422767
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||| |||||    
T  31422717 cgatgaaaaatcacatcaataacaaacttgatgtgtggagcaaggaataat 31422767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 50307400 - 50307450
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||| || |||||||| ||||||||||||||||    
T  50307400 cgatgaaaaatcacaccaataataaacttgatgtctggagcaagggataat 50307450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 12302367 - 12302412
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  12302367 aaaaaacacaccaataacaaacttgatgtgtggagcaagtgataat 12302412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 15823968 - 15823923
Alignment:
Q  227 aaaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||| |||||||||||||||| ||||| ||||    
T  15823968 aaaaatcacaccaataacaaacttgatgtgtggagtaaggggtaat 15823923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 27338991 - 27339036
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||||    
T  27338991 aaaaatcacatcaataacaaacttgatgtgtggaacaagggataat 27339036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 2232908 - 2232872
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaa 263  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  2232908 aaaaaccacaccaataaaaacttgatgtgtggagcaa 2232872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 9526778 - 9526743
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaa 263  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9526778 aaaaatcacaccaataa-aacttgatgtgtggagcaa 9526743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 13785123 - 13785159
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaa 263  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  13785123 aaaaatcacaccaataaaaacttgatgtgtgaagcaa 13785159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 25248398 - 25248453
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagg 265  Q
    |||||||||||| ||| |||||||||| ||||||||| |||||||||||||| ||||    
T  25248398 tgttgtgaattc-gatgaaaaatcacaacaataacaaacttgatgtgtggagtaagg 25248453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 8e-24; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 207 - 275
Target Start/End: Original strand, 24873036 - 24873103
Alignment:
Q  207 ggctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24873036 ggctgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 24873103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 43082468 - 43082403
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43082468 ctgttgtgaat-ctgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 43082403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 43080096 - 43080032
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43080096 tgttgtgaat-ctgatcaaaaatcacaccaataacaacttgatgtgtggagcaatggataattaag 43080032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 28283073 - 28283122
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28283073 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 28283122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 22684509 - 22684553
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22684509 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 22684553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 15809695 - 15809652
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15809695 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 15809652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 33541254 - 33541316
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  33541254 ctgttgtgaattc-gatcaaaaatcacaccaataacaaacttgatgtgtggagtaagggataat 33541316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 44721338 - 44721277
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  44721338 ctgttgtgaat-ctgatcaataatcacaccaataacaacttgatgtgtggagtaagggataat 44721277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 18811191 - 18811142
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  18811191 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaagagataat 18811142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 3874487 - 3874428
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataa 270  Q
    |||||||||||| | | |||||||||||||||||||||||||||||||||||||| |||||    
T  3874487 tgttgtgaattc-gttgaaaaatcacaccaataacaacttgatgtgtggagcaagagataa 3874428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 28251427 - 28251471
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  28251427 aaaaatcacaccaataacaacttgatgtgtggagcaaggaataat 28251471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 43530593 - 43530549
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  43530593 aaaaatcacaccaataacaacttgatgtgtggagcaagagataat 43530549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 4424496 - 4424453
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  4424496 aaaatcacaccaataacaacttggtgtgtggagcaagggataat 4424453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 32339787 - 32339744
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  32339787 aaaatcacaccaataacaacttgatgtgtggggcaagggataat 32339744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 14477740 - 14477679
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  14477740 tgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataat 14477679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 3883447 - 3883496
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||||||    
T  3883447 cgatgaaaaatcacatcaataacaacttgatgtgtggagcaaaggataat 3883496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 15073191 - 15073143
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  15073191 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 15073143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 15956443 - 15956384
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  15956443 tgttgtgaattc-gatgaaaaatcacatcaataacaaacttgatgtgtggagcaagggata 15956384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 18813377 - 18813316
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||| |||||| ||| |||||||||||||||||||||||||| ||| ||||||| ||||||    
T  18813377 ctgttgcgaattc-gatgaaaaatcacaccaataacaacttgatatgtagagcaagagataat 18813316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 21482798 - 21482737
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| ||||||||||||||||| || |||||||||||||||||| ||||||    
T  21482798 tgttgtgaattc-gatgaaaaatcacaccaataataaacttgatgtgtggagcaagtgataat 21482737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 27827463 - 27827421
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  27827463 aaaatcacaccaataacaaacttgatgtgtggagcaagggata 27827421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 27829774 - 27829732
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  27829774 aaaatcacaccaataacaaacttgatgtgtggagcaagggata 27829732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 14808235 - 14808190
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||    
T  14808235 aaaaatcacaccaataacaaacttgatgtgtggagcaacggataat 14808190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 183310 - 183251
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||| ||| | ||| |||||||||||||| |||||||||||||||||||||||    
T  183310 tgttgtgaattc-gatgagaaaacacaccaataacaaacttgatgtgtggagcaagggata 183251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 609214 - 609171
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||    
T  609214 aaaatcgcaccaataacaacttgatgcgtggagcaagagataat 609171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 13858333 - 13858395
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||| ||||| ||| ||||||||||||||||| || |||||||||||||||||| ||||||    
T  13858333 ctgttgtaaattc-gatgaaaaatcacaccaataagaaacttgatgtgtggagcaagtgataat 13858395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 27911551 - 27911504
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatta 273  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||||    
T  27911551 aaaaatcacaccaataaaaaacttgatgtgtggagcaagtgataatta 27911504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 27957970 - 27957923
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatta 273  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||||    
T  27957970 aaaaatcacaccaataaaaaacttgatgtgtggagcaagtgataatta 27957923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 17983021 - 17982967
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaact-tgatgtgtggagcaa 263  Q
    |||||||||||||||||  ||||||||||||||  |||| |||||||||||||||    
T  17983021 tgttgtgaattccgatctcaaatcacaccaatacaaactatgatgtgtggagcaa 17982967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 41383143 - 41383093
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  41383143 cgatgaaaaaccacaccaataacaaacttgatgtgtggagcaagagataat 41383093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 27106769 - 27106806
Alignment:
Q  233 cacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||||| |||||||||||||||||||||||    
T  27106769 cacaccaataacaaacttgatgtgtggagcaagggata 27106806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 30423525 - 30423489
Alignment:
Q  226 caaaaatcacaccaataacaacttgatgtgtggagcaa 263  Q
    |||||||||||||||||| |||||||||||||||||||    
T  30423525 caaaaatcacaccaataa-aacttgatgtgtggagcaa 30423489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 31162683 - 31162634
Alignment:
Q  228 aaaatcacaccaataaca-acttgatgtgtggagcaagggataattaagt 276  Q
    |||||||||||||||| | |||||||||||||||||||  ||||||||||    
T  31162683 aaaatcacaccaataaaatacttgatgtgtggagcaagtaataattaagt 31162634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 15068461 - 15068413
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||| |||||||||||||| ||||| ||||||||||||| |||||||||    
T  15068461 cgatgaaaaatcacaccaacaacaaacttgatgtgtggaacaagggata 15068413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 15185564 - 15185623
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||| | | |||||||||| ||||||||| |||||||||||||| ||||||||    
T  15185564 tgttgtgaattcgg-tgaaaaatcacatcaataacaaacttgatgtgtggagtaagggata 15185623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 6646 - 6582
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6646 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 6582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 1606827 - 1606763
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1606827 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 1606763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 25542976 - 25542916
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25542976 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 25542916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 38394434 - 38394374
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38394434 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 38394374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 40550277 - 40550213
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40550277 tgttgtgaattc-gacgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 40550213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 9027045 - 9027094
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9027045 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 9027094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 20297810 - 20297750
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  20297810 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagagataat 20297750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 22137527 - 22137463
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22137527 tgttgtgaattc-gacgaaaaatcacaccaataacaacttgatgtgtggagcaagagataattaag 22137463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 28486013 - 28485953
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  28486013 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatatgtggagcaagggataat 28485953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 28487990 - 28487941
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28487990 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 28487941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 40552554 - 40552490
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40552554 tgttgtgaattc-gacgaaaaatcacaccaataacaacttgatgtgtggagcaagagataattaag 40552490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 7349134 - 7349182
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7349134 aaaaatcacaccaataacaacttgatgtgtggagtaagggataattaag 7349182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 7351508 - 7351556
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7351508 aaaaatcacaccaataacaacttgatgtgtggagtaagggataattaag 7351556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 7471837 - 7471881
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7471837 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 7471881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 40836600 - 40836644
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  40836600 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 40836644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 2935700 - 2935653
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  2935700 aaaatcacaccaataacaacttgatgtgtgaagcaagggataattaag 2935653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 38397070 - 38397027
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38397070 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 38397027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 36059 - 36017
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36059 aaatcacaccaataacaacttgatgtgtggagcaagggataat 36017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 1850411 - 1850369
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1850411 aaatcacaccaataacaacttgatgtgtggagcaagggataat 1850369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 11759564 - 11759515
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  11759564 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaagagataat 11759515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 20299908 - 20299848
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  20299908 tgttgtgaattt-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagagataat 20299848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 1046774 - 1046818
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  1046774 aaaaatcacaccaataacaacttgatgtgtggagcaagagataat 1046818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 1502832 - 1502875
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  1502832 aaaatcacaccaataacaacttgatgtgtggagcaagagataat 1502875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 13099317 - 13099375
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggat 268  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  13099317 tgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggat 13099375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 48458084 - 48458041
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  48458084 aaaatcacaccaataacaacttgatgtgtggagcaagagataat 48458041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 44994 - 44952
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  44994 aaatcacaccaataacaacttgatgtgtggagcaatggataat 44952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 20626470 - 20626421
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||||    
T  20626470 cgatgaaaaatcacaccaataacaacctgatgtgtggagcaagagataat 20626421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 20630361 - 20630312
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||||    
T  20630361 cgatgaaaaatcacaccaataacaacctgatgtgtggagcaagagataat 20630312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 20642780 - 20642731
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||||    
T  20642780 cgatgaaaaatcacaccaataacaacctgatgtgtggagcaagagataat 20642731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 40946759 - 40946718
Alignment:
Q  230 aatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  40946759 aatcacatcaataacaacttgatgtgtggagcaagggataat 40946718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 1049146 - 1049190
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||    
T  1049146 aaaattcacaccaataacaacttgatgtgtggagcaagagataat 1049190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 25276567 - 25276513
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaag 264  Q
    ||||||||||||| | | ||||||||||||||||||||||||||||||||| ||||    
T  25276567 ctgttgtgaattc-gctaaaaaatcacaccaataacaacttgatgtgtggatcaag 25276513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 43253374 - 43253417
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||    
T  43253374 aaaatcacaccaataacaatttgatgtgtggagcaagagataat 43253417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 7092070 - 7092112
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  7092070 aaaatcacaccaataacaaacttgatgtgtggagcaagggata 7092112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 260
Target Start/End: Original strand, 31153702 - 31153740
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggag 260  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  31153702 cgatgaaaaatcacaccaataacaacttgatgtgtggag 31153740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 7469875 - 7469923
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||| |||||||||    
T  7469875 cgatgaaaaatcacaccaataacaatttgatgtgtggagc-agggataat 7469923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 4295792 - 4295836
Alignment:
Q  222 cgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagg 265  Q
    |||| |||||||||||||||||| |||||||||||||||||||||    
T  4295792 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagg 4295836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 18345967 - 18345931
Alignment:
Q  233 cacaccaataacaacttgatgtgtggagcaagggata 269  Q
    |||||||| ||||||||||||||||||||||||||||    
T  18345967 cacaccaacaacaacttgatgtgtggagcaagggata 18345931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 24749017 - 24748973
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||| |||||||||||||||||||||||||    
T  24749017 aaaaccacaccaataacaaacttgatgtgtggagcaagggataat 24748973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 31434910 - 31434954
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  31434910 aaaatcacaccaataacaaacttgatgtgtggagcaaggaataat 31434954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 3036170 - 3036112
Alignment:
Q  212 ttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||| ||| | |||||||||||||||||| ||||||| ||||||||| ||||||    
T  3036170 ttgtgaattc-gatgagaaatcacaccaataacaatttgatgtttggagcaagagataat 3036112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 22108484 - 22108453
Alignment:
Q  244 caacttgatgtgtggagcaagggataattaag 275  Q
    ||||||||||||||||||||||||||||||||    
T  22108484 caacttgatgtgtggagcaagggataattaag 22108453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 3879009 - 3878967
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||| |||||| |||||||||||||||||||| ||||||    
T  3879009 aaatcacatcaataataacttgatgtgtggagcaagagataat 3878967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 7094317 - 7094355
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagg 265  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  7094317 aaaatcacaccaataacaaacttgatgtgtggagcaagg 7094355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 21678506 - 21678445
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||| |||||||||||| |||||    
T  21678506 tgttgtgaattc-gatgaaaaatcacaccgataacaaacttgatttgtggagcaaggaataat 21678445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 42223589 - 42223539
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| ||||| |||||||||||||| |||||||||||||| ||||||||||    
T  42223589 cgataaaaaaacacaccaataacaaacttgatgtgtggagtaagggataat 42223539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 44725000 - 44724963
Alignment:
Q  233 cacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||||| |||||||||||||||||||||||    
T  44725000 cacaccaataacaaacttgatgtgtggagcaagggata 44724963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 21680474 - 21680411
Alignment:
Q  208 gctgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||||| ||| ||||  |||||||||||||| ||||||||||| ||||||| |||||    
T  21680474 gctgttgtgaattc-gatgaaaacccacaccaataacaagcttgatgtgtgaagcaaggaataat 21680411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 12195354 - 12195418
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12195354 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 12195418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 26065961 - 26066025
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26065961 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 26066025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 26068235 - 26068299
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26068235 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 26068299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 4816070 - 4816131
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4816070 ctgttgtgaat-ctgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 4816131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 29754548 - 29754609
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29754548 ctgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 29754609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 8717195 - 8717255
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8717195 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 8717255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 33309313 - 33309266
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33309313 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 33309266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 33311582 - 33311535
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33311582 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 33311535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 11982872 - 11982932
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  11982872 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaaggaataat 11982932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 26932403 - 26932463
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26932403 tgttgtgaattt-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 26932463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 5273072 - 5273116
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  5273072 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 5273116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 18322550 - 18322506
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18322550 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 18322506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 2628743 - 2628786
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2628743 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 2628786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 19704402 - 19704464
Alignment:
Q  209 ctgttgtgaattccgatcaa-aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||    
T  19704402 ctgttgtgaattc-gatcgagaaatcacaccaataacaacttgatgtgtggagcaagggataat 19704464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 26065439 - 26065397
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggata 269  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26065439 aaaaatcacaccaataacaacttgatgtgtggagcaagggata 26065397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 26085408 - 26085366
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggata 269  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26085408 aaaaatcacaccaataacaacttgatgtgtggagcaagggata 26085366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 14507037 - 14507077
Alignment:
Q  231 atcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14507037 atcacaccaataacaacttgatgtgtggagcaagggataat 14507077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 30967657 - 30967609
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagt 276  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  30967657 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagt 30967609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 28241179 - 28241222
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  28241179 aaaatcacaccaataacaacttgatgtgtggagcaagagataat 28241222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 20915197 - 20915257
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  20915197 tgttgtgaat-ctgatcaaaaatcacaccaataataacttgatgtgtggggcaaggggtaat 20915257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 1230105 - 1230149
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  1230105 aaaaatcacaccaataacaacttgatgtgtggatcaagagataat 1230149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 30728685 - 30728728
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  30728685 aaaaatcacaccaataacaaacttgatgtgtggagcaagggata 30728728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 9020387 - 9020337
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  9020387 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagagataat 9020337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 13057648 - 13057598
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  13057648 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaaaggataat 13057598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 15367498 - 15367437
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||||||||||| | ||||||    
T  15367498 tgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcatgtgataat 15367437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 30034463 - 30034500
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagg 265  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  30034463 aaaatcacaccaataacaacttgatgtatggagcaagg 30034500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 3631784 - 3631847
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatta 273  Q
    |||||||||||| ||| ||||| |||||||||||||| ||||| |||||||||||| ||||||||    
T  3631784 tgttgtgaattc-gatgaaaaaacacaccaataacaaacttgacgtgtggagcaagtgataatta 3631847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 15541001 - 15541049
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||| |||||||| ||||||||||| |||||||||||||||||||||||    
T  15541001 cgatgaaaaatcaaaccaataacaaacttgatgtgtggagcaagggata 15541049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 24338295 - 24338354
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||| ||||    
T  24338295 tgttgtgaattc-gatgaaaaatcacatcaataacaaacttgatgtgtggagcaagagata 24338354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 3629711 - 3629772
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| | ||| |||||||||||||| ||||||||||||||||| |||||||    
T  3629711 tgttgtgaattc-gatgagaaaacacaccaataacaaacttgatgtgtggagcaaaggataat 3629772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 15346802 - 15346752
Alignment:
Q  222 cgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||| ||||||||||||||| |||| ||||||    
T  15346802 cgatgaaaaatcacaccaataacaaacttgatgtgtggaacaagtgataat 15346752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 14458618 - 14458667
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||| | |||||||||||||| || |||||||    
T  14458618 cgatgaaaaatcacaccaataatagcttgatgtgtggagtaatggataat 14458667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 10584395 - 10584355
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaaggga 267  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  10584395 aaaaccacaccaataacaaacttgatgtgtggagcaaggga 10584355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 13040221 - 13040173
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||| ||||||||||| |||||||| ||||||||||||||||| |||||    
T  13040221 cgatgaaaaatcacactaataacaaacttgatgtgtggagcaatggata 13040173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 22351721 - 22351756
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaa 263  Q
    ||||||||||||||||| |||||||||||||||||||    
T  22351721 aaaaatcacaccaataa-aacttgatgtgtggagcaa 22351756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 22491077 - 22491018
Alignment:
Q  212 ttgtgaattccgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    |||||||||| ||| |||||||||||||||||| ||||| ||||||||||| | |||||||    
T  22491077 ttgtgaattc-gatgaaaaatcacaccaataacaaacttaatgtgtggagctaaggataat 22491018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 3372977 - 3373041
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3372977 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 3373041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 23741696 - 23741761
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23741696 ctgttgtgaattc-gacgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 23741761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 10750137 - 10750074
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10750137 tgttgtgaattc-gatcaaaa-tcacaccaataacaacttgatgtgtggagcaagggataattaag 10750074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 10757613 - 10757550
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10757613 tgttgtgaattc-gatcaaaa-tcacaccaataacaacttgatgtgtggagcaagggataattaag 10757550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 15354414 - 15354478
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15354414 tgttgtgaattc-gacgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 15354478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 15356690 - 15356754
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15356690 tgttgtgaattc-gacgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 15356754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 23665484 - 23665420
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23665484 tgttgtgaattc-gacgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 23665420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 23793103 - 23793167
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23793103 tgttgtgaattc-gacgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 23793167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 31179213 - 31179277
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31179213 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtatggagcaagggataattaag 31179277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 38959971 - 38960032
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38959971 ctgttgcgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 38960032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 2175341 - 2175279
Alignment:
Q  210 tgttgtgaattccgatcaaaaa--tcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  2175341 tgttgtgaattc-gatcaaaaaagtcacaccaataacaacttgatgtgtggagcaagggataat 2175279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 4410442 - 4410399
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4410442 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 4410399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 21684310 - 21684353
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  21684310 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 21684353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 34476910 - 34476953
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34476910 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 34476953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 34479275 - 34479318
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34479275 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 34479318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 25921333 - 25921374
Alignment:
Q  230 aatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25921333 aatcacaccaataacaacttgatgtgtggagcaagggataat 25921374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 31543172 - 31543112
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  31543172 tgttgtgaat-ctgatcaataatcacaccaataacaacttgatgtgtggagcaagggttaat 31543112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 39798457 - 39798408
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  39798457 cgatgaaaaatcacaccaataacaatttgatgtgtggagcaagggataat 39798408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 10528955 - 10528998
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  10528955 aaaatcacaccaataacaacttgatgtgtgaagcaagggataat 10528998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 38882509 - 38882466
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  38882509 aaaatcacaccaataacaacttgatgtgtggagcaagagataat 38882466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 18467123 - 18467062
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  18467123 tgttgtgaattc-gatgaaaaatcacactaataacaaacttgatgtgtggagcaagggataat 18467062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 18469448 - 18469387
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  18469448 tgttgtgaattc-gatgaaaaatcataccaataacaaacttgatgtgtggagcaagggataat 18469387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 27910872 - 27910811
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaactt-gatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  27910872 tgttgtgaattc-gatgaaaaatcacaccaataacaaatttgatgtgtggagcaagggataat 27910811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 36402181 - 36402231
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  36402181 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 36402231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 25804442 - 25804402
Alignment:
Q  231 atcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  25804442 atcacaccaataacaacttgatgtgtggagcaagagataat 25804402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 4237049 - 4237006
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||| |||||| ||||||    
T  4237049 aaaatcacaccaataacaacttgatgtgtgaagcaagagataat 4237006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 24127291 - 24127230
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| ||||||||||| |||||||| ||| |||||||||||||||||||||    
T  24127291 tgttgtgaattc-gatgaaaaatcacacaaataacaaacttaatgtgtggagcaagggataat 24127230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 34530559 - 34530620
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||||| ||||||| ||||||    
T  34530559 tgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtcgagcaagtgataat 34530620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 41585580 - 41585641
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||||||| ||||| ||||||    
T  41585580 tgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggggcaagagataat 41585641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 16776578 - 16776533
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||    
T  16776578 aaaaatcacaccaataacaaacttgatgtgtggagcaaggaataat 16776533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 31545502 - 31545461
Alignment:
Q  230 aatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  31545502 aatcacaccaataacaacttgatgtgtggagtaagggttaat 31545461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 15552668 - 15552624
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||    
T  15552668 aaaaatcacaccaataacaacttgatgcgtgaagtaagggataat 15552624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 21289182 - 21289134
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  21289182 cgatgaaaaatcacaccaatatcaaacttgatgtgtggagcaagggata 21289134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 27912973 - 27912914
Alignment:
Q  212 ttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||| ||| ||||||| |||||||||||| |||||||||||||| ||||||||||    
T  27912973 ttgtgaattc-gatgaaaaatcccaccaataacaaacttgatgtgtggagtaagggataat 27912914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 271
Target Start/End: Complemental strand, 21948446 - 21948407
Alignment:
Q  233 cacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  21948446 cacaccaataacaaacttgatgtgtggagcaagggataat 21948407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 39854922 - 39854856
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 275  Q
    |||||| |||||| ||| ||||||||||||||||| || |||||| |||||||||||||||| |||||    
T  39854922 ctgttgcgaattc-gatgaaaaatcacaccaataataaacttgatatgtggagcaagggatagttaag 39854856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 40221947 - 40221904
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  40221947 aaaaatcacaccaataacaaacttgatgtgtggagcaaaggata 40221904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 10587236 - 10587198
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagg 265  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  10587236 aaaatcacaccaataacaaacttgatgtgtggagcaagg 10587198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 18597068 - 18597018
Alignment:
Q  222 cgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||| |||||||||| ||||||||| ||||||    
T  18597068 cgatgaaaaatcacaccaataacaaacttgatgtatggagcaagtgataat 18597018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 2724311 - 2724266
Alignment:
Q  227 aaaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||    
T  2724311 aaaaatcacaccaataacaaacttgatgtgtatagcaagggataat 2724266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 18511074 - 18511115
Alignment:
Q  229 aaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  18511074 aaatcacatcaataacaaacttgatgtgtggagcaagggata 18511115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 31465849 - 31465898
Alignment:
Q  227 aaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||||||||| || |||||||||||| ||||| |||||||||    
T  31465849 aaaaatcacaccaataacaaatttgatgtgtggaacaaggaataattaag 31465898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 658220 - 658264
Alignment:
Q  228 aaaatcacaccaataacaactt-gatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||| || |||||||||||||||| |||||    
T  658220 aaaatcacaccaataacaaatttgatgtgtggagcaaggaataat 658264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 696292 - 696248
Alignment:
Q  228 aaaatcacaccaataaca-acttgatgtgtggagcaagggataat 271  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||    
T  696292 aaaatcataccaataacagacttgatgtgtggagcaagagataat 696248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 2818194 - 2818238
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||    
T  2818194 aaaaacacaccaataacaaacttgatgtatggagcaagggataat 2818238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 17818352 - 17818396
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||    
T  17818352 aaaaccacaccaataacaaacttgatgtgtggagcaaggaataat 17818396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 10621366 - 10621430
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621366 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 10621430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 747177 - 747117
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  747177 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 747117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 6065644 - 6065697
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6065644 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 6065697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 50494417 - 50494353
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50494417 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagagataattaag 50494353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 28412870 - 28412935
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaagt 276  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  28412870 tgttgtgaattc-gatgaaaaaacacaccaataacaacttgatgtgtggagcaagggataatcaagt 28412935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 38210789 - 38210732
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggat 268  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  38210789 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaagggat 38210732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 53893904 - 53893953
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53893904 cgatcgaaaatcacaccaataacaacttgatgtgtggagcaagggataat 53893953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 456309 - 456266
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  456309 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 456266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 458686 - 458643
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  458686 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 458643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 5192052 - 5192009
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5192052 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 5192009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 5886600 - 5886557
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataa 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5886600 aaaaatcacaccaataacaacttgatgtgtggagcaagggataa 5886557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 5900073 - 5900030
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataa 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5900073 aaaaatcacaccaataacaacttgatgtgtggagcaagggataa 5900030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 9604446 - 9604512
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaagt 276  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  9604446 ctgttgcgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaaggaataatcaagt 9604512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 10084245 - 10084288
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10084245 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 10084288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 10191168 - 10191211
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10191168 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 10191211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 10955883 - 10955926
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10955883 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 10955926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 11168503 - 11168460
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11168503 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 11168460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 41849454 - 41849411
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41849454 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 41849411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 38890441 - 38890399
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38890441 aaatcacaccaataacaacttgatgtgtggagcaagggataat 38890399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 5522482 - 5522523
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggata 269  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5522482 aaaatcacaccaataacaacttgatgtgtggagcaagggata 5522523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 6063294 - 6063347
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  6063294 cgatgaaaaatcacaccgataacaacttgatgtgtggaacaagggataattaag 6063347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 25389309 - 25389265
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  25389309 aaaaatcataccaataacaacttgatgtgtggagcaagggataat 25389265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 10958179 - 10958222
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  10958179 aaaatcacaccaataacaacttgatgtgtggagcaagagataat 10958222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 22114159 - 22114202
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  22114159 aaaatcacaccaatagcaacttgatgtgtggagcaagggataat 22114202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 25533831 - 25533784
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggata 269  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  25533831 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaagagata 25533784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 18099021 - 18099071
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  18099021 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 18099071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 43226477 - 43226435
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  43226477 aaatcacaccaataacaacttgatgtgtggagcaagagataat 43226435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 43228687 - 43228645
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  43228687 aaatcacaccaataacaacttgatgtgtggagcaagagataat 43228645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 45883346 - 45883292
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 275  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  45883346 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagttaag 45883292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 1321881 - 1321837
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  1321881 aaaatcacaccaataacaaacttgatgtgtggagcaagggataat 1321837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 4308143 - 4308183
Alignment:
Q  231 atcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  4308143 atcacaccaataacaacttgatgtgtggagcaaggaataat 4308183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 28181417 - 28181362
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagg 265  Q
    |||||||||||| || ||||||||||||||||||||| |||||||||||||||||||    
T  28181417 tgttgtgaattc-gaacaaaaatcacaccaataacaaacttgatgtgtggagcaagg 28181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 42990701 - 42990657
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  42990701 aaaatcacaccaataacaaacttgatgtgtggagcaagggataat 42990657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 24980127 - 24980065
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||||||||| ||| | ||| |||||||||||||| |||||||||||||||||||||||||    
T  24980127 ctgttgtgaattc-gatgagaaaacacaccaataacaaacttgatgtgtggagcaagggataat 24980065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 35917893 - 35917940
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataattaa 274  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  35917893 aaaaattacaccaataacaacttgatgtatggaacaagggataattaa 35917940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 36957703 - 36957660
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||| | ||||||||||||||||||||||||||||||||||    
T  36957703 aaaatcatatcaataacaacttgatgtgtggagcaagggataat 36957660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 3859930 - 3859865
Alignment:
Q  210 tgttgtgaattccgatcaaaaa-tcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||||||  |||||||| |||||    
T  3859930 tgttgtgaattc-gatcgaaaagtcacaccaataacaacttgatgtgtggaataagggatagttaag 3859865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 18096751 - 18096801
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||||||    
T  18096751 cgatgaaaaattacaccaataacaaacttgatgtgtggagcaagggataat 18096801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 28101848 - 28101909
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||| |||||||||| || |||||||||||||||||||||||||    
T  28101848 tgttgtgaattc-gatgaaaaattacaccaataataaacttgatgtgtggagcaagggataat 28101909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 28761287 - 28761348
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| ||||||||||||||||| || |||||||||||||||||| ||||||    
T  28761287 tgttgtgaattc-gatgaaaaatcacaccaataataatcttgatgtgtggagcaagtgataat 28761348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 31151754 - 31151701
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaag 264  Q
    |||||||||||| ||| |||||||||||||||||  |||||||||||||||||||    
T  31151754 tgttgtgaattc-gatgaaaaatcacaccaataaatacttgatgtgtggagcaag 31151701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 36012232 - 36012182
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  36012232 cgatgaaaaatcacaccaataacaaacttgatgtatggagcaagggataat 36012182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 32219486 - 32219441
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||    
T  32219486 aaaaatcacacaaataacaaacttgatgtgtggagcaagggataat 32219441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 53915337 - 53915397
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 269  Q
    |||||| |||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  53915337 ctgttgcgaattc-gatgaaaaatcacaccaataacaaacttgatgtatggagcaagggata 53915397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 15781295 - 15781232
Alignment:
Q  208 gctgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||||| |||  |||| |||||||||||||| |||||||||||||| ||||||||||    
T  15781295 gctgttgtgaattc-gatggaaaaacacaccaataacaaacttgatgtgtggagtaagggataat 15781232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 27101043 - 27101075
Alignment:
Q  231 atcacaccaataacaacttgatgtgtggagcaa 263  Q
    |||||||||||||||||||||||||||||||||    
T  27101043 atcacaccaataacaacttgatgtgtggagcaa 27101075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 27635515 - 27635559
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  27635515 aaaatcacaccaataacaaacttgatgtgtggagcaaggaataat 27635559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 51726863 - 51726899
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaag 264  Q
    ||||||||||||||||||||||||||||||| |||||    
T  51726863 aaaatcacaccaataacaacttgatgtgtggggcaag 51726899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 53917517 - 53917565
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  53917517 cgatgaaaaatcacactaataacaaacttgatgtgtggagcaagggata 53917565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 1313805 - 1313762
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  1313805 aaaactcacaccaataacaaacttgatgtgtggagcaagggata 1313762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 234 - 269
Target Start/End: Original strand, 7606465 - 7606500
Alignment:
Q  234 acaccaataacaacttgatgtgtggagcaagggata 269  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7606465 acaccaataacaacttgatgtgtggagcaagagata 7606500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 11170772 - 11170729
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||  |||||||||||||||||||||| ||||||||||    
T  11170772 aaaatcacattaataacaacttgatgtgtggagtaagggataat 11170729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 6484773 - 6484708
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaactt-gatgtgtggagcaagggataattaag 275  Q
    ||||||||||||  || ||||||||||| |||||||| || |||||||||||||||| |||||||||    
T  6484773 tgttgtgaattca-ataaaaaatcacactaataacaaatttgatgtgtggagcaaggaataattaag 6484708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 1626543 - 1626587
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||    
T  1626543 aaaaccacaccaataacaaacttgatgtgtggagcaaggaataat 1626587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 17795671 - 17795616
Alignment:
Q  208 gctgttgtgaattccgatcaaaaatcacaccaataa-caacttgatgtgtggagcaa 263  Q
    |||||||||||||| ||| |||||||||||||||||  || ||||||||||||||||    
T  17795671 gctgttgtgaattc-gatgaaaaatcacaccaataataaatttgatgtgtggagcaa 17795616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 19104111 - 19104056
Alignment:
Q  208 gctgttgtgaattccgatcaaaaatcacaccaataa-caacttgatgtgtggagcaa 263  Q
    |||||||||||||| ||| |||||||||||||||||  || ||||||||||||||||    
T  19104111 gctgttgtgaattc-gatgaaaaatcacaccaataataaatttgatgtgtggagcaa 19104056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 42992783 - 42992739
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||    
T  42992783 aaaatcacactaataacaaacttgatgtgtagagcaagggataat 42992739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 43423319 - 43423367
Alignment:
Q  222 cgatcaaaaatcacaccaataacaac-ttgatgtgtggagcaagggata 269  Q
    |||| |||||| |||||||||||||  ||||||||||||||||||||||    
T  43423319 cgatgaaaaattacaccaataacaaagttgatgtgtggagcaagggata 43423367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 51674626 - 51674670
Alignment:
Q  228 aaaatcacaccaataac-aacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||| |||||||||| |||||||||| |||||    
T  51674626 aaaatcacaccaataacaaacttgatgtatggagcaaggaataat 51674670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 35215433 - 35215497
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35215433 tgttgtgaat-ctgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 35215497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 35217810 - 35217874
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35217810 tgttgtgaat-ctgatcaaaaatcacaccaataacaacttgatgtgtggagcaagagataattaag 35217874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 45332020 - 45332084
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45332020 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggaacaagggataattaag 45332084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 36558721 - 36558781
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  36558721 tgttgtgaattc-gatgaaaaatcacaccaataataacttgatgtgtggagcaagggataat 36558781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 36560981 - 36561041
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  36560981 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggagcaaggaataat 36561041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 19501859 - 19501902
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19501859 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 19501902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 19504194 - 19504237
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19504194 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 19504237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 23452094 - 23452137
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23452094 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 23452137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 42453874 - 42453831
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  42453874 aaaatcacaccaataacaacttgatgtgtggagcaagagataat 42453831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 27105201 - 27105151
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  27105201 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 27105151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 45279860 - 45279902
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  45279860 aaatcacaccaataacaacttgatgtgtggagcaagagataat 45279902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 11739421 - 11739480
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 269  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||||| ||||||||||||    
T  11739421 tgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtagagcaagggata 11739480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 13909902 - 13909946
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  13909902 aaaagtcacaccaataacaacttgatgtgtggagtaagggataat 13909946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 17849511 - 17849468
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  17849511 aaaaatcacaccaataacaaacttgatgtgtggagcaagggata 17849468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 19008034 - 19007989
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||    
T  19008034 aaaaatcacaccaataacaaacttgatgtgtggagcaaggaataat 19007989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 22287181 - 22287240
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||| ||| | ||| |||||||||||||| |||||||||||||||||||||||    
T  22287181 tgttgtgaattc-gatgagaaaacacaccaataacaaacttgatgtgtggagcaagggata 22287240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 22874519 - 22874460
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||| ||| ||||||||||||||||| || |||||||||||||||||| ||||    
T  22874519 tgttgtgaattc-gatgaaaaatcacaccaataataaacttgatgtgtggagcaagtgata 22874460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 24162084 - 24162124
Alignment:
Q  231 atcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  24162084 atcacaccaataacaacttgatgtgtggagaaagagataat 24162124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 28197034 - 28196986
Alignment:
Q  222 cgatcaaaaatcacaccaataacaactt-gatgtgtggagcaagggata 269  Q
    |||| |||||||||||||||||||| || ||||||||||||||||||||    
T  28197034 cgatgaaaaatcacaccaataacaaatttgatgtgtggagcaagggata 28196986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 37962791 - 37962857
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagt 276  Q
    |||||||||||| ||| |||||||||| |||||| || |||||||||||||| ||| |||||||||||    
T  37962791 tgttgtgaattc-gatgaaaaatcacatcaataataaacttgatgtgtggagtaagtgataattaagt 37962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 5723056 - 5723110
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaact-tgatgtgtggagcaa 263  Q
    ||||||||||||||  |||||||||||||||||  |||| |||||||||||||||    
T  5723056 tgttgtgaattccgtacaaaaatcacaccaatacaaactatgatgtgtggagcaa 5723110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 43623434 - 43623476
Alignment:
Q  222 cgatcaaaaatcacaccaataac-aacttgatgtgtggagcaa 263  Q
    |||| |||||||||||||||||| |||||||||||||||||||    
T  43623434 cgatgaaaaatcacaccaataactaacttgatgtgtggagcaa 43623476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 14837680 - 14837617
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaa--cttgatgtgtggagcaagggataat 271  Q
    ||||||||||||| ||| | |||||||| |||||||||  |||||||||||||||||| ||||||    
T  14837680 ctgttgtgaattc-gatgagaaatcacatcaataacaatacttgatgtgtggagcaagtgataat 14837617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 268
Target Start/End: Complemental strand, 42064884 - 42064855
Alignment:
Q  239 aataacaacttgatgtgtggagcaagggat 268  Q
    ||||||||||||||||||||||||||||||    
T  42064884 aataacaacttgatgtgtggagcaagggat 42064855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 28459054 - 28459098
Alignment:
Q  228 aaaatcacaccaataaca-acttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||    
T  28459054 aaaatcacaccaataaaacacttgatgtgtggagcaagtgataat 28459098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 22564 - 22500
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22564 tgttgtgaattc-gacgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 22500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 24839 - 24775
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24839 tgttgtgaattc-gacgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 24775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 16931631 - 16931695
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16931631 tgttgtgaattc-gatgaaaaatcacaccaataacaacttaatgtgtggagcaagggataattaag 16931695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 18847644 - 18847584
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18847644 tgttgtgaat-ctgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 18847584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 22780223 - 22780276
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22780223 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 22780276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 22782593 - 22782641
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22782593 aaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 22782641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 11435446 - 11435387
Alignment:
Q  212 ttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  11435446 ttgtgaatttcgatgaaaaatcacaccaataacaacttgatgtgtggagcaagagataat 11435387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 22046526 - 22046587
Alignment:
Q  210 tgttgtgaattccgatc-aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22046526 tgttgtgaattc-gatcgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 22046587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 11006094 - 11006154
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||    
T  11006094 tgttgtgaattc-gatcgaaaaacacaccaataacaacttgatgtgtggagcaagggataat 11006154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 11008408 - 11008468
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||    
T  11008408 tgttgtgaattc-gatcgaaaaacacaccaataacaacttgatgtgtggagcaagggataat 11008468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 22132229 - 22132289
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22132229 tgttgtgaat-ctgatcaataatcacaccaataacaacttgatgtgtggagcaagggataat 22132289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 22134457 - 22134517
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22134457 tgttgtgaat-ctgatcaataatcacaccaataacaacttgatgtgtggagcaagggataat 22134517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 47868883 - 47868834
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47868883 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 47868834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 2484731 - 2484774
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2484731 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 2484774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 5635334 - 5635377
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5635334 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 5635377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 7941798 - 7941751
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7941798 aaaatcacaccaacaacaacttgatgtgtggagcaagggataattaag 7941751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 8631276 - 8631319
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  8631276 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 8631319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 9176331 - 9176374
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9176331 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 9176374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 17662108 - 17662151
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17662108 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 17662151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 24348676 - 24348633
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24348676 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 24348633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 22802577 - 22802638
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  22802577 tgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 22802638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 3937137 - 3937186
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  3937137 cgatgaaaaatcacaccaataacaacttgatgtgaggagcaagggataat 3937186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 11437855 - 11437795
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||| ||||||    
T  11437855 tgttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtatggagcaagagataat 11437795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 16933988 - 16934044
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaaggga 267  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||    
T  16933988 tgttgtgaattc-gatgaaaaatcacaccaataacaacttaatgtgtggagcaaggga 16934044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 38409696 - 38409636
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||||||||||||||||||    
T  38409696 tgttgtgaattca-atcgaaaaacacaccaataacaacttgatgtgtggagcaagggataat 38409636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 44599691 - 44599743
Alignment:
Q  222 cgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44599691 cgatgaaaaatcacaccaataacaacttgatgtgtggagcaa-ggataattaag 44599743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 22044248 - 22044292
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  22044248 aaaaataacaccaataacaacttgatgtgtggagcaagggataat 22044292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 51015721 - 51015677
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  51015721 aaaaaacacaccaataacaacttgatgtgtggagcaagggataat 51015677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 6765336 - 6765274
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  6765336 ctgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagtaagggataat 6765274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 9174003 - 9174046
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  9174003 aaaatcacactaataacaacttgatgtgtggagcaagggataat 9174046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 16455715 - 16455653
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  16455715 ctgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataat 16455653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 26085836 - 26085875
Alignment:
Q  230 aatcacaccaataacaacttgatgtgtggagcaagggata 269  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26085836 aatcacaccaataacaacttgatgtgtggagcaagggata 26085875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 31849456 - 31849499
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  31849456 aaaatcacaccaataacaacttgatgtgtggagcaagagataat 31849499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 14633792 - 14633750
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14633792 aaatcacaccaataacaacttgatgtgtggagcaagagataat 14633750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 14787285 - 14787335
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  14787285 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 14787335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 14789284 - 14789334
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  14789284 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 14789334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 16453796 - 16453735
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  16453796 tgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataat 16453735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 36919440 - 36919490
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  36919440 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 36919490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 36921349 - 36921399
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  36921349 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 36921399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 38928035 - 38928085
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  38928035 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 38928085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 47210655 - 47210697
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  47210655 aaatcacaccaataacaacttgatgtgtggagcaagagataat 47210697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 18709020 - 18709064
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||    
T  18709020 aaaaaccacaccaataacaacttgatgtgtggagcaaggcataat 18709064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 24889265 - 24889225
Alignment:
Q  231 atcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  24889265 atcacaccaataacaacttgatgtgtggagcaaggaataat 24889225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 40637545 - 40637505
Alignment:
Q  231 atcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  40637545 atcacaccaataacaacttgatgtgtggagcaaggaataat 40637505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 3824465 - 3824508
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  3824465 aaaaatcacaccaataacaaacttgatgtgtggagcaagggata 3824508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 5198879 - 5198836
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||| ||||||||||||||||||| |||||||    
T  5198879 aaaatcacaccaataataacttgatgtgtggagcaatggataat 5198836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 37089211 - 37089273
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  37089211 ctgttgcgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaatggataat 37089273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 2891780 - 2891727
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataac-aacttgatgtgtggagcaa 263  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  2891780 tgttgtgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaa 2891727  T

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Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 53405615 - 53405565
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| ||||||||||||||||| || |||||||||||||||||||||||||    
T  53405615 cgatgaaaaatcacaccaataataaacttgatgtgtggagcaagggataat 53405565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 22800704 - 22800764
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 269  Q
    |||||| |||||| ||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  22800704 ctgttgcgaattc-gatgaaaaatcacaccaataacaaacttgatgtggggagcaagggata 22800764  T

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Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 27499537 - 27499483
Alignment:
Q  209 ctgttgtgaattccgatcaaaaatcacaccaataac-aacttgatgtgtggagcaa 263  Q
    ||||| ||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  27499537 ctgttctgaattc-gatgaaaaatcacaccaataacaaacttgatgtgtggagcaa 27499483  T

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Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 37312940 - 37312983
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  37312940 aaaaatcacaccaataataaacttgatgtgtggagcaagggata 37312983  T

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Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 271
Target Start/End: Complemental strand, 9148705 - 9148667
Alignment:
Q  233 cacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  9148705 cacaccaataacaacttgatgtgtggaacaagagataat 9148667  T

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Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 33415343 - 33415393
Alignment:
Q  220 tccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||| | ||||||||| |||||||| |||||||||||||||||||||||    
T  33415343 tccgatgagaaatcacacaaataacaaacttgatgtgtggagcaagggata 33415393  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 6133309 - 6133264
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||||| ||||||||||||| ||||||||||||||||||| |||||    
T  6133309 aaaaattacaccaataacaaacttgatgtgtggagcaaggaataat 6133264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 4215774 - 4215730
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||| |||||| ||||||||||||||||||| ||||||| |||||    
T  4215774 aaaactcacacaaataacaacttgatgtgtgaagcaaggaataat 4215730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 4885185 - 4885149
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaa 263  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  4885185 aaaaatcacaccaataaaaacttgatgcgtggagcaa 4885149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 5101404 - 5101345
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||||||||||| ||| | ||| |||||||||||||| ||||||||||||| |||||||||    
T  5101404 tgttgtgaattc-gatgagaaaacacaccaataacaaacttgatgtgtggatcaagggata 5101345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 47563230 - 47563186
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||    
T  47563230 aaaaccacaccaataacaaacttgatgtgtggagcaaggaataat 47563186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 49089033 - 49088985
Alignment:
Q  222 cgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 269  Q
    |||| |||||||||||||||||| |||||||||||| ||| ||||||||    
T  49089033 cgatgaaaaatcacaccaataacaaacttgatgtgttgagtaagggata 49088985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 61 - 2
Alignment:
Q  212 ttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  61 ttgtgaatttcgatgaaaaatcacaccaataacaacttgatgtgtggagcaagagataat 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 12715 - 12775
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  12715 tgttgtgaattc-gatgaaaaatgacaccaataacaacttgatgtgtggagcaagggataat 12775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 3309 - 3266
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  3309 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 3266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 14247 - 14290
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14247 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 14290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 29600 - 29557
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29600 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 29557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 455 - 413
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  455 aaatcacaccaataacaacttgatgtgtggagcaagggataat 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 1309 - 1353
Alignment:
Q  227 aaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  1309 aaaaatcacaccaataacaacttgatgtgtggagcaagagataat 1353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 41341 - 41384
Alignment:
Q  228 aaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  41341 aaaatcacaccaataacaacttgatgtgtggagcaagagataat 41384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 79615 - 79568
Alignment:
Q  227 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatta 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  79615 aaaaatcacaccaataacaaacttgatgtgtggagcaagggataatta 79568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 50446 - 50396
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  50446 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 50396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 52445 - 52395
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  52445 cgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 52395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 183500 - 183542
Alignment:
Q  229 aaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  183500 aaatcacaccaataacaacttgatgtgtggagcaagagataat 183542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 4518 - 4578
Alignment:
Q  210 tgttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataat 271  Q
    |||||||||| | |||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  4518 tgttgtgaat-ctgatccaaaatcacaccaataacaatttgatgtgtggagtaagggataat 4578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 1294 - 1341
Alignment:
Q  212 ttgtgaattccgatcaaaaatcacaccaataacaacttgatgtgtggag 260  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  1294 ttgtgaattc-gatgaaaaatcacaccaataacaacttgatgtgtggag 1341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 11335 - 11379
Alignment:
Q  231 atcacaccaataacaacttgatgtgtggagcaagggataattaag 275  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  11335 atcacaccaataacaacttgatgtgtggagtaaggaataattaag 11379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 69149 - 69193
Alignment:
Q  228 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  69149 aaaatcacaccaataacaaacttgatgtgtggagcaagggataat 69193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 36028 - 35980
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 269  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  36028 cgatgaaaaattacaccaataacaaacttgatgtgtggagcaagggata 35980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 85662 - 85612
Alignment:
Q  222 cgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataat 271  Q
    |||| |||||||||||||||||||| ||| |||||||||||||| ||||||    
T  85662 cgatgaaaaatcacaccaataacaatcttaatgtgtggagcaagagataat 85612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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