View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5490-Insertion-6 (Length: 855)

Name: NF5490-Insertion-6
Description: NF5490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5490-Insertion-6
NF5490-Insertion-6
[»] chr7 (38 HSPs)
chr7 (452-852)||(38808342-38808734)
chr7 (245-372)||(38808134-38808262)
chr7 (8-126)||(24790253-24790372)
chr7 (8-103)||(48409056-48409152)
chr7 (8-103)||(4179022-4179118)
chr7 (8-103)||(20344148-20344247)
chr7 (8-103)||(25766780-25766876)
chr7 (8-126)||(39731620-39731740)
chr7 (22-103)||(43503975-43504058)
chr7 (8-103)||(23555290-23555386)
chr7 (8-109)||(25616104-25616206)
chr7 (8-109)||(35854165-35854267)
chr7 (205-251)||(38808071-38808117)
chr7 (8-125)||(29991302-29991422)
chr7 (58-109)||(41648831-41648882)
chr7 (56-103)||(47675960-47676007)
chr7 (8-109)||(27348066-27348168)
chr7 (58-103)||(14069657-14069702)
chr7 (58-103)||(14379685-14379730)
chr7 (56-109)||(48489729-48489782)
chr7 (8-103)||(43864493-43864589)
chr7 (56-103)||(19502476-19502523)
chr7 (58-109)||(38671042-38671093)
chr7 (56-103)||(41317262-41317309)
chr7 (8-103)||(6592153-6592255)
chr7 (8-103)||(6594371-6594473)
chr7 (8-103)||(18388573-18388675)
chr7 (10-103)||(26417567-26417661)
chr7 (56-102)||(36146236-36146282)
chr7 (56-109)||(495805-495858)
chr7 (8-87)||(32060154-32060237)
chr7 (59-103)||(18126947-18126991)
chr7 (56-103)||(31732792-31732839)
chr7 (56-103)||(47673768-47673815)
chr7 (58-125)||(1113952-1114021)
chr7 (59-109)||(8153638-8153688)
chr7 (8-103)||(18392009-18392111)
chr7 (56-109)||(23344263-23344315)
[»] chr5 (36 HSPs)
chr5 (8-109)||(9789039-9789140)
chr5 (8-126)||(16409728-16409847)
chr5 (8-109)||(18441459-18441560)
chr5 (8-125)||(36073843-36073962)
chr5 (27-109)||(26178155-26178237)
chr5 (29-109)||(26171037-26171117)
chr5 (8-103)||(22536111-22536207)
chr5 (8-109)||(30182837-30182939)
chr5 (8-125)||(13343309-13343429)
chr5 (8-103)||(30682746-30682842)
chr5 (8-102)||(39468373-39468468)
chr5 (8-103)||(10593511-10593613)
chr5 (8-103)||(29720615-29720715)
chr5 (10-103)||(29750976-29751074)
chr5 (45-109)||(16649652-16649716)
chr5 (56-103)||(28750479-28750526)
chr5 (56-103)||(42428254-42428301)
chr5 (8-103)||(29722775-29722875)
chr5 (56-109)||(5887252-5887305)
chr5 (8-125)||(25413009-25413129)
chr5 (45-109)||(8565765-8565829)
chr5 (56-103)||(534056-534103)
chr5 (56-103)||(3075573-3075620)
chr5 (56-107)||(19806660-19806711)
chr5 (58-109)||(31183273-31183324)
chr5 (8-103)||(25078374-25078476)
chr5 (8-103)||(25136343-25136445)
chr5 (56-102)||(33831976-33832022)
chr5 (8-103)||(40380344-40380446)
chr5 (56-109)||(13240049-13240102)
chr5 (58-103)||(32637123-32637168)
chr5 (56-103)||(538318-538365)
chr5 (56-103)||(13488498-13488545)
chr5 (56-103)||(42426059-42426106)
chr5 (72-125)||(37439454-37439510)
chr5 (8-103)||(40382555-40382657)
[»] chr3 (40 HSPs)
chr3 (8-125)||(7779802-7779920)
chr3 (8-126)||(23199937-23200055)
chr3 (8-103)||(801338-801435)
chr3 (56-126)||(23197744-23197814)
chr3 (8-103)||(5257967-5258063)
chr3 (8-100)||(5260149-5260242)
chr3 (8-126)||(40735631-40735751)
chr3 (8-103)||(45283239-45283337)
chr3 (8-109)||(9635941-9636043)
chr3 (8-125)||(45095412-45095530)
chr3 (8-125)||(9581532-9581652)
chr3 (8-103)||(6716752-6716851)
chr3 (8-103)||(19683711-19683807)
chr3 (8-103)||(54635376-54635475)
chr3 (56-126)||(40734795-40734866)
chr3 (8-109)||(9634639-9634740)
chr3 (8-125)||(7764714-7764834)
chr3 (56-109)||(22834824-22834877)
chr3 (8-103)||(37408708-37408804)
chr3 (56-103)||(761142-761189)
chr3 (8-102)||(7762515-7762610)
chr3 (56-103)||(29196213-29196260)
chr3 (56-103)||(39153188-39153235)
chr3 (59-125)||(29682657-29682726)
chr3 (56-109)||(9666287-9666340)
chr3 (8-103)||(29811117-29811213)
chr3 (8-103)||(29813310-29813406)
chr3 (46-109)||(16499302-16499365)
chr3 (56-103)||(37406987-37407034)
chr3 (8-103)||(3617703-3617805)
chr3 (8-103)||(25637683-25637785)
chr3 (8-109)||(51399063-51399165)
chr3 (56-109)||(2074900-2074952)
chr3 (56-103)||(23391736-23391783)
chr3 (58-109)||(31314740-31314791)
chr3 (72-126)||(43403529-43403586)
chr3 (59-109)||(5236274-5236324)
chr3 (56-109)||(27305536-27305587)
chr3 (58-103)||(23410155-23410200)
chr3 (56-109)||(44700301-44700354)
[»] scaffold0491 (2 HSPs)
scaffold0491 (8-126)||(10959-11078)
scaffold0491 (8-126)||(8533-8652)
[»] chr1 (32 HSPs)
chr1 (8-126)||(51765648-51765767)
chr1 (8-126)||(20622033-20622154)
chr1 (8-126)||(40282628-40282750)
chr1 (8-103)||(9987453-9987551)
chr1 (8-103)||(21054209-21054307)
chr1 (8-109)||(13316169-13316271)
chr1 (8-109)||(20762917-20763019)
chr1 (8-103)||(9036669-9036767)
chr1 (8-109)||(8550601-8550703)
chr1 (8-109)||(49918599-49918701)
chr1 (8-98)||(3157114-3157205)
chr1 (56-109)||(833987-834040)
chr1 (8-103)||(37559688-37559784)
chr1 (56-103)||(13137804-13137851)
chr1 (56-109)||(40122018-40122071)
chr1 (56-109)||(45644175-45644228)
chr1 (56-109)||(50166997-50167050)
chr1 (56-103)||(196733-196780)
chr1 (46-109)||(13659168-13659231)
chr1 (56-111)||(50169030-50169085)
chr1 (56-110)||(3189642-3189696)
chr1 (56-110)||(3198459-3198513)
chr1 (56-110)||(3207298-3207352)
chr1 (8-109)||(10925471-10925573)
chr1 (8-103)||(44203885-44203987)
chr1 (56-100)||(28223248-28223292)
chr1 (56-103)||(30476270-30476317)
chr1 (62-109)||(37503379-37503426)
chr1 (8-109)||(44455409-44455511)
chr1 (56-97)||(3846950-3846991)
chr1 (60-109)||(28265376-28265425)
chr1 (56-109)||(31659536-31659589)
[»] chr6 (25 HSPs)
chr6 (8-125)||(6097248-6097366)
chr6 (8-103)||(2171350-2171446)
chr6 (22-103)||(3072580-3072661)
chr6 (38-125)||(412368-412456)
chr6 (8-109)||(30834351-30834453)
chr6 (8-103)||(16555123-16555220)
chr6 (8-103)||(16578335-16578432)
chr6 (8-103)||(16616948-16617045)
chr6 (8-103)||(16631679-16631776)
chr6 (8-103)||(16653366-16653463)
chr6 (8-103)||(5408893-5408989)
chr6 (8-103)||(5413218-5413314)
chr6 (8-103)||(27648105-27648202)
chr6 (8-109)||(16452145-16452247)
chr6 (8-100)||(9182857-9182950)
chr6 (8-125)||(31404474-31404594)
chr6 (10-87)||(6136135-6136216)
chr6 (56-125)||(28137211-28137281)
chr6 (56-109)||(26954108-26954161)
chr6 (56-126)||(33160149-33160221)
chr6 (8-103)||(25421559-25421661)
chr6 (56-103)||(5406026-5406073)
chr6 (56-103)||(5410351-5410398)
chr6 (8-103)||(6027499-6027601)
chr6 (56-109)||(3038744-3038797)
[»] scaffold0286 (1 HSPs)
scaffold0286 (10-103)||(11817-11911)
[»] chr2 (24 HSPs)
chr2 (8-109)||(32289817-32289919)
chr2 (8-125)||(6266943-6267061)
chr2 (8-103)||(4484151-4484247)
chr2 (8-126)||(5723055-5723175)
chr2 (8-103)||(4502956-4503052)
chr2 (8-109)||(36205482-36205584)
chr2 (8-109)||(17057186-17057288)
chr2 (8-109)||(17085169-17085271)
chr2 (8-109)||(38312489-38312591)
chr2 (8-103)||(30833597-30833693)
chr2 (8-103)||(45100003-45100099)
chr2 (8-109)||(6594821-6594923)
chr2 (56-109)||(723564-723617)
chr2 (56-109)||(34139590-34139643)
chr2 (56-109)||(36987892-36987945)
chr2 (56-109)||(42362643-42362696)
chr2 (56-125)||(36773856-36773926)
chr2 (56-109)||(2334235-2334288)
chr2 (58-103)||(11690787-11690832)
chr2 (56-109)||(14633645-14633698)
chr2 (56-109)||(33162271-33162324)
chr2 (8-103)||(12647199-12647301)
chr2 (56-109)||(24885883-24885936)
chr2 (56-93)||(11067598-11067635)
[»] chr4 (25 HSPs)
chr4 (8-100)||(31495130-31495224)
chr4 (8-103)||(13992114-13992210)
chr4 (8-125)||(48143297-48143417)
chr4 (7-109)||(52082480-52082583)
chr4 (8-109)||(5369899-5370001)
chr4 (8-109)||(56178453-56178555)
chr4 (56-109)||(29999646-29999699)
chr4 (56-109)||(48893460-48893513)
chr4 (56-103)||(26175460-26175507)
chr4 (56-109)||(34570231-34570284)
chr4 (56-109)||(45687004-45687057)
chr4 (56-109)||(47038233-47038286)
chr4 (56-103)||(12743752-12743799)
chr4 (56-103)||(46147219-46147266)
chr4 (8-103)||(7122936-7123038)
chr4 (8-103)||(8395857-8395959)
chr4 (8-109)||(54199725-54199827)
chr4 (8-87)||(7125155-7125238)
chr4 (10-101)||(9927284-9927376)
chr4 (59-103)||(37740926-37740970)
chr4 (56-103)||(12739377-12739424)
chr4 (56-103)||(52467181-52467228)
chr4 (56-109)||(5872115-5872166)
chr4 (59-109)||(52095179-52095229)
chr4 (56-109)||(36463213-36463266)
[»] chr8 (24 HSPs)
chr8 (8-109)||(19945176-19945278)
chr8 (8-103)||(2627987-2628084)
chr8 (8-108)||(34254149-34254250)
chr8 (8-103)||(25690207-25690305)
chr8 (8-108)||(34256325-34256426)
chr8 (8-87)||(3439755-3439835)
chr8 (8-103)||(31218506-31218602)
chr8 (8-125)||(42498444-42498562)
chr8 (8-103)||(17982902-17982998)
chr8 (8-109)||(1746036-1746138)
chr8 (8-109)||(30143589-30143691)
chr8 (8-126)||(44304104-44304225)
chr8 (56-125)||(5689565-5689635)
chr8 (56-109)||(41366435-41366488)
chr8 (8-103)||(15213035-15213131)
chr8 (8-109)||(4731907-4732009)
chr8 (56-109)||(6599263-6599316)
chr8 (56-109)||(6674716-6674769)
chr8 (56-109)||(12702448-12702501)
chr8 (56-103)||(3303494-3303541)
chr8 (56-103)||(43036720-43036767)
chr8 (8-110)||(27811527-27811632)
chr8 (56-109)||(18105893-18105946)
chr8 (56-103)||(4743051-4743098)
[»] scaffold0002 (1 HSPs)
scaffold0002 (8-126)||(434783-434904)
[»] scaffold0016 (1 HSPs)
scaffold0016 (56-126)||(114901-114972)
[»] scaffold1519 (1 HSPs)
scaffold1519 (8-103)||(1165-1261)
[»] scaffold0006 (1 HSPs)
scaffold0006 (46-109)||(148929-148992)
[»] scaffold0565 (1 HSPs)
scaffold0565 (8-103)||(2417-2519)
[»] scaffold1808 (1 HSPs)
scaffold1808 (8-87)||(118-201)
[»] scaffold0674 (1 HSPs)
scaffold0674 (8-87)||(3558-3641)
[»] scaffold0066 (1 HSPs)
scaffold0066 (8-100)||(20241-20334)
[»] scaffold1668 (1 HSPs)
scaffold1668 (59-103)||(1325-1369)


Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-175; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 452 - 852
Target Start/End: Original strand, 38808342 - 38808734
Alignment:
Q  452 gtctaagaaactgtgttgtagtaataagaaactttggtttttgtaccnnnnnnnnnnnnnnnngaaactttggtttgaccaattgtcctaagaaatttga 551  Q
    |||||||||||||||||||||||||||||||||||||||||||||||                |||||||||||||||||||||||||||||||||||||    
T  38808342 gtctaagaaactgtgttgtagtaataagaaactttggtttttgtaccaaaaaaa---------gaaactttggtttgaccaattgtcctaagaaatttga 38808432  T
Q  552 aatctcaagattcatggaatggaacacagatgtcttacaatacatgattccaaaaacctgatatgatgctagcttctggacagatgataatataatattt 651  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38808433 aatctcaagattcatggaatggaacacagatgtcttacaatacatgattccaaaaacatgatatgatgctagcttctggacagatgataatataatattt 38808532  T
Q  652 ttgtttaaggaattgtttacttggttatggtaccagtttgtctcnnnnnnncaacttttccttttgtttccttctactttcaagttccaacaattgtagt 751  Q
    ||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38808533 ttgtttaaggaattgtttacttggttatggtaccagtttgtctctttttttcaacttttccttttgtttccttctactttcaagttccaacaattgtagt 38808632  T
Q  752 tgactgtaac-aaatatcataattagttggaaattgttattgtccacggaattttctattcagcacatacattcaaggaagattatcttccttcaatttg 850  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38808633 tgactgtaacaaaagatcataattagttggaaattgttattgtccacggaattttctattcagcacatacattcaaggaagattatcttccttcaatttg 38808732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 245 - 372
Target Start/End: Original strand, 38808134 - 38808262
Alignment:
Q  245 tttactataatgaaaaaagtgatagcatggaatcctatttcataacaaactcggattgcaacaatttctatcagg-aaaaaagaaacctagctgaagtaa 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  38808134 tttactataatgaaaaaagtgatagcatggaatcctatttcataacaaactcggattgcaacaatttctatcaggaaaaaaaaaaacctagctgaagtaa 38808233  T
Q  344 ataacatggaaaaacaatatataaccatg 372  Q
    |||||||||||||||||||||||||||||    
T  38808234 ataacatggaaaaacaatatataaccatg 38808262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 24790253 - 24790372
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttgtt-ggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| ||||||||||||| || ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  24790253 agatctaggtggtgttttgttgattattacttgcacgcactttgtttggtggttaccactttccgttgctccacacatcatactttgcattggtgtgttt 24790352  T
Q  107 ttgtacggaattcacaacaa 126  Q
    ||||||||||||||||||||    
T  24790353 ttgtacggaattcacaacaa 24790372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 48409056 - 48409152
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||||| |||||||||  ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  48409056 agatctaggtgctgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatcatatttcgtattggtgtg 48409152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 4179022 - 4179118
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||| ||  |||||||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  4179022 agatctaggtgctgttattgttgattattgcttacattcactttgttattggttactactttcctttgctccacacatcatagtttgtattggtgtg 4179118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 20344148 - 20344247
Alignment:
Q  8 agatctaggtgctg---ttttgttgattgttgcttgcacacactttgtt-ggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||   |||||| ||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||||||| ||||| |||||||||    
T  20344148 agatctaggtgctggttttttgtcgattgttgcttgcacacactttgtttggtggttaccactctcctttgctccacacatcattctttgcattggtgtg 20344247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 25766876 - 25766780
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||| | |||||||||  ||||||||||||| | ||||||||||||||||| || |||||||||||    
T  25766876 agatctaggtgctgttattgttgattattgcttgcgctcactttgttattggttactacttttctttgctccacacatcatatttcgtattggtgtg 25766780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 39731620 - 39731740
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttg-tattggtgtgtt 105  Q
    ||||||||||| |||| ||||||||| |||||||||| |||||||||  ||||||||||||| | ||| |  ||| ||||||||||| |||||||||| |    
T  39731620 agatctaggtgttgttattgttgattattgcttgcacccactttgttattggttactacttttctttgttttacatatcatactttgttattggtgtggt 39731719  T
Q  106 tttgtacggaattcacaacaa 126  Q
    ||||| |||||||||||||||    
T  39731720 tttgtccggaattcacaacaa 39731740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 43504058 - 43503975
Alignment:
Q  22 ttttgttgattgttgcttgcacacac--tttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| ||||||||||||||  ||||||||||||||| ||| ||| ||||||||||||||||| || |||||||||||    
T  43504058 ttttgttgattattgcttgcacacacactttgttggtggttaccactctcctttgctccacacatcatatttcgtattggtgtg 43503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 23555290 - 23555386
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| |||| ||||||||| |||||||    ||||||| |  ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  23555290 agatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 23555386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 25616104 - 25616206
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||    ||||||| |  ||||||||||||||| |||||||| |||||||| |||||||||||||| ||    
T  25616104 agatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccatacatcatagtttgtattggtgtgatt 25616203  T
Q  107 ttg 109  Q
    |||    
T  25616204 ttg 25616206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 35854165 - 35854267
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| ||| |||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||    
T  35854165 agatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtatttgtgtgatt 35854264  T
Q  107 ttg 109  Q
    |||    
T  35854265 ttg 35854267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 38808071 - 38808117
Alignment:
Q  205 gcatccaatgatatgactatccttcatatgatctactatctttacta 251  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  38808071 gcatccagtgatatgactatccttcatatgatctactatctttacta 38808117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 29991302 - 29991422
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg--t 104  Q
    ||||||||||| |||| ||||||||| || ||||  | ||||||| |  ||||||||||||| | ||||||||||||||||| ||||||||||||||  |    
T  29991302 agatctaggtgttgttattgttgattattacttgtgctcactttgatattggttactacttttctttgctccacacatcatagtttgtattggtgtgact 29991401  T
Q  105 ttttgtacggaattcacaaca 125  Q
    ||  | |||||||||||||||    
T  29991402 ttgagaacggaattcacaaca 29991422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 41648882 - 41648831
Alignment:
Q  58 gttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  41648882 gttactactttcctttgctccacacatcatagtttgtattggtgtgattttg 41648831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 47676007 - 47675960
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  47676007 tggttactactttcctttgctccacacatcatagtttgtattggtgtg 47675960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 27348066 - 27348168
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| ||| |||    ||||||| |  ||||| ||||||||| ||||||||||||||||| |||||||| ||||| ||    
T  27348066 agatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttgctactttcctttgctccacacatcataatttgtatttgtgtgatt 27348165  T
Q  107 ttg 109  Q
    |||    
T  27348166 ttg 27348168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 14069702 - 14069657
Alignment:
Q  58 gttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  14069702 gttactactttcctttgctccacacatcatagtttgtattggtgtg 14069657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 14379730 - 14379685
Alignment:
Q  58 gttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  14379730 gttactactttcctttgctccacacatcatagtttgtattggtgtg 14379685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 48489729 - 48489782
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| || ||||||||||| |||||    
T  48489729 tggttactactttcctttgctccacacatcatagttggtattggtgtgattttg 48489782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 43864493 - 43864589
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||    ||||||| |  || |||| ||||||| || |||||||||||||| ||||||||||||||    
T  43864493 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattgattaccactttcctttactccacacatcatagtttgtattggtgtg 43864589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 19502476 - 19502523
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||    
T  19502476 tggttactactttcctttgctccacacatcatagtttgtattagtgtg 19502523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 38671093 - 38671042
Alignment:
Q  58 gttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||| ||||| ||||||||||||||||| |||||||||||||| |||||    
T  38671093 gttactattttcctttgctccacacatcatagtttgtattggtgtgattttg 38671042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 41317309 - 41317262
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  41317309 tggttactactttcctttgctccaaacatcatagtttgtattggtgtg 41317262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 6592255 - 6592153
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttg-ttggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||| ||||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  6592255 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggt 6592156  T
Q  101 gtg 103  Q
    |||    
T  6592155 gtg 6592153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 6594473 - 6594371
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttg-ttggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||| ||||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  6594473 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggt 6594374  T
Q  101 gtg 103  Q
    |||    
T  6594373 gtg 6594371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 18388675 - 18388573
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  18388675 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggt 18388576  T
Q  101 gtg 103  Q
    |||    
T  18388575 gtg 18388573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 26417567 - 26417661
Alignment:
Q  10 atctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||| ||||||||| |||||||     |||||| |  ||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  26417567 atctaggtgctgttattgttgattattgcttgtggttactttgatattggttactactttcctttactccacatatcatagtttgtattggtgtg 26417661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 36146282 - 36146236
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgt 102  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  36146282 tggttactactttcctttgctccacacatcatagtttgtatttgtgt 36146236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 495858 - 495805
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| |||||||||| |||||| |||||||| ||||| |||||    
T  495858 tggttactactttcctttgctccacatatcataatttgtattagtgtgattttg 495805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 32060237 - 32060154
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatcat 87  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| ||||| ||||||||||||||    
T  32060237 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcat 32060154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 18126947 - 18126991
Alignment:
Q  59 ttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||| || |||||||||||||| ||||||||||||||    
T  18126947 ttactactttcctttactccacacatcatagtttgtattggtgtg 18126991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 31732839 - 31732792
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  31732839 tggttactactttcatttgctccacacatcatagtttgtactggtgtg 31732792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 47673815 - 47673768
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||  ||| ||||||||||||| ||||||||||||||    
T  47673815 tggttactactttcttttgttccacacatcatagtttgtattggtgtg 47673768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 1113952 - 1114021
Alignment:
Q  58 gttactactttccgttgctccacacatcatactttgtattg--gtgtgtttttgtacggaattcacaaca 125  Q
    ||||| ||||||| ||||||||||||||||| |||||||||  ||| |||||  | ||||||||||||||    
T  1113952 gttaccactttcctttgctccacacatcatagtttgtattgatgtgagttttgattcggaattcacaaca 1114021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 8153638 - 8153688
Alignment:
Q  59 ttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    |||||||||||| ||||||||| ||||||| |||||||| ||||| |||||    
T  8153638 ttactactttcctttgctccacgcatcatagtttgtattagtgtgattttg 8153688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 18392111 - 18392009
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| || || ||||||||||||   || ||||||||||||    
T  18392111 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctctgtcgctccacacatcattattctttgtattggt 18392012  T
Q  101 gtg 103  Q
    |||    
T  18392011 gtg 18392009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 23344263 - 23344315
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||| |||| |||||    
T  23344263 tggttactactttcctttgctccacacatcatagttt-tattgatgtgattttg 23344315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 5e-43; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 9789140 - 9789039
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgtttt 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  9789140 agatctaggtgctgttttgttgatttttgcttgcacacactttgttggtggttactactttcctttgctccacacatcatactttgtattggtgtggttt 9789041  T
Q  108 tg 109  Q
    ||    
T  9789040 tg 9789039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 16409728 - 16409847
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  16409728 agatctaggtgttgttattgttgattattgcttgcacccactttgttagtggttactactttcctttgctccacacatcatactttgtattggtgtgatt 16409827  T
Q  107 ttgtacggaattcacaacaa 126  Q
    ||||||||||||||||||||    
T  16409828 ttgtacggaattcacaacaa 16409847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 18441560 - 18441459
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgtttt 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||    
T  18441560 agatctaggtgctgttttgttgattattgcttgcacacactttgttggtggttactactttcctttgctccacacatcttactttgtattggtgtggttt 18441461  T
Q  108 tg 109  Q
    ||    
T  18441460 tg 18441459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 36073962 - 36073843
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgt-gtt 105  Q
    |||||||||||||||| ||||||||| |||||||||  |||||||||  |||||| |||||||| ||||||||||||||||| ||||||||||||| |||    
T  36073962 agatctaggtgctgttattgttgattattgcttgcattcactttgttattggttattactttcctttgctccacacatcatagtttgtattggtgtggtt 36073863  T
Q  106 tttgtacggaattcacaaca 125  Q
    ||||||||||||||||||||    
T  36073862 tttgtacggaattcacaaca 36073843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 26178155 - 26178237
Alignment:
Q  27 ttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    |||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| ||||||||||| |||||    
T  26178155 ttgattattgcttgcacacactttgttagtggttactactttcctttgctccacacatcttacttcgtattggtgtggttttg 26178237  T

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Target: chr5; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 26171037 - 26171117
Alignment:
Q  29 gattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    |||| |||||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||| ||||||||||| |||||    
T  26171037 gattattgcttgcacacactttgttagtgcttactactttcctttgctccacacatcttacttcgtattggtgtggttttg 26171117  T

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Target: chr5; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 22536207 - 22536111
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttg--ttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| | ||||||||||||||||||||| ||||||||  |||||||||||  || ||||| |||||||||||||| |||||||||||||||    
T  22536207 agatctaggtgtt-ttttgttgattgttgcttgcatacactttgctttggtggttaccgctctccgtcgctccacacatcattctttgtattggtgtg 22536111  T

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Target: chr5; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 30182837 - 30182939
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| ||| |||||  |||||||||  ||||||||||||||| ||||||||||||||||| ||||| |||||||| ||    
T  30182837 agatctaggtgttgttattgttgattattgtttgcattcactttgttattggttactactttcctttgctccacacatcatagtttgttttggtgtgatt 30182936  T
Q  107 ttg 109  Q
    |||    
T  30182937 ttg 30182939  T

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Target: chr5; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 13343309 - 13343429
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||||  |||||||||  ||||||||||||||| ||||||||||||||||| || ||||| |||||  |    
T  13343309 agatctaggtgttgttattgttgattattgcttgcattcactttgttattggttactactttcctttgctccacacatcatagttcgtattagtgtgact 13343408  T
Q  107 ttgt--acggaattcacaaca 125  Q
    ||||   ||||||||||||||    
T  13343409 ttgttaccggaattcacaaca 13343429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 30682842 - 30682746
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| |||| ||||||||| |||||||    ||||||| |  ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  30682842 agatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 30682746  T

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Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 39468468 - 39468373
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgt 102  Q
    |||||||||||||||| ||||||||| ||| |||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  39468468 agatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 39468373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 10593511 - 10593613
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttg-ttggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| |||||||||||||   |||||||| ||||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  10593511 agatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggt 10593610  T
Q  101 gtg 103  Q
    |||    
T  10593611 gtg 10593613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 29720615 - 29720715
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttg--cacacactttg-ttggtggttactactttccgttgctccacacatcatact--ttgtattggtgt 102  Q
    ||||||||||| ||||||||||||| |||||||  ||||||||||| ||||||||||| ||| ||| |||||||||||| |||| |  ||||||||||||    
T  29720615 agatctaggtggtgttttgttgattattgcttgtacacacactttgtttggtggttaccactctcctttgctccacacaacatatttcttgtattggtgt 29720714  T
Q  103 g 103  Q
    |    
T  29720715 g 29720715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 29751074 - 29750976
Alignment:
Q  10 atctaggtgctgttttgttgattgttgcttgcacacac---tttgttggtggttactactttccgttgctccacacatcatact--ttgtattggtgtg 103  Q
    ||||||||| ||||||||||||| ||||||||||||||   ||  ||||||||||| ||| ||| ||||||||||||||||| |  |||||||||||||    
T  29751074 atctaggtggtgttttgttgattattgcttgcacacacacattgtttggtggttaccactctcctttgctccacacatcatatttcttgtattggtgtg 29750976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 16649716 - 16649652
Alignment:
Q  45 cactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||| | |||||||||||||||| ||||||||||||||||| ||||||||||| || |||||    
T  16649716 cactttgattgtggttactactttcctttgctccacacatcatagtttgtattggtatgattttg 16649652  T

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Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 28750526 - 28750479
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  28750526 tggttactactttcctttgctccacacatcataatttgtattggtgtg 28750479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 42428301 - 42428254
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  42428301 tggttactactttcctttgctccacacatcatagtttgtattggtgtg 42428254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 29722775 - 29722875
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttg--cacacactttg-ttggtggttactactttccgttgctccacacatcatact--ttgtattggtgt 102  Q
    ||||||||||| ||||||||||||| |||||||  ||||||||||| ||||||||||| ||| | | |||||||||||| |||| |  ||||||||||||    
T  29722775 agatctaggtggtgttttgttgattattgcttgtacacacactttgtttggtggttaccactctactttgctccacacaccatatttcttgtattggtgt 29722874  T
Q  103 g 103  Q
    |    
T  29722875 g 29722875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 5887305 - 5887252
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| |||||||||| |||||| |||||||||||||| |||||    
T  5887305 tggttactactttcctttgctccacatatcatagtttgtattggtgtgattttg 5887252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 25413009 - 25413129
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||| ||||||||||| ||||||||| |||||||  | ||||| | |  || |||||| ||||| ||||||||||||||||| || ||||||||||| ||    
T  25413009 agatataggtgctgttattgttgattattgcttgtgctcacttggatattgattactaatttcctttgctccacacatcatagttcgtattggtgtgatt 25413108  T
Q  107 ttgta--cggaattcacaaca 125  Q
    ||| |  ||||||||||||||    
T  25413109 ttgaaaccggaattcacaaca 25413129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 8565829 - 8565765
Alignment:
Q  45 cactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    |||||||||  ||||||||||||||| ||||||||||||||||| ||| |||| ||||| |||||    
T  8565829 cactttgttattggttactactttcctttgctccacacatcatagtttatattagtgtgattttg 8565765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 534056 - 534103
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  534056 tggttactactttcctttgctccacacatcatagtttctattggtgtg 534103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 3075620 - 3075573
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  3075620 tggttattactttcctttgctccacacatcatagtttgtattggtgtg 3075573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 19806660 - 19806711
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttt 107  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||| |||||    
T  19806660 tggttactactttcctttgccccacacatcatagtttgtattggtgagtttt 19806711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 31183273 - 31183324
Alignment:
Q  58 gttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||| ||||||||||||||||  |||||||||||||| |||||    
T  31183273 gttactactttcctttgctccacacatcatggtttgtattggtgtgattttg 31183324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 25078374 - 25078476
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatca---tactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| ||||| |||||||||||||   | ||||||||||||    
T  25078374 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattcttctttgtattggt 25078473  T
Q  101 gtg 103  Q
    |||    
T  25078474 gtg 25078476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 25136343 - 25136445
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatca---tactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| ||||| |||||||||||||   | ||||||||||||    
T  25136343 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattcttctttgtattggt 25136442  T
Q  101 gtg 103  Q
    |||    
T  25136443 gtg 25136445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 33831976 - 33832022
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgt 102  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  33831976 tggttactactttcctttgctccacacatcatagtttgtatttgtgt 33832022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 40380344 - 40380446
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttg-ttggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||| ||||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  40380344 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggt 40380443  T
Q  101 gtg 103  Q
    |||    
T  40380444 gtg 40380446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 13240049 - 13240102
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| || |||||||||||||| |||||||| ||||| |||||    
T  13240049 tggttactactttcctttactccacacatcatagtttgtattagtgtgattttg 13240102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 32637123 - 32637168
Alignment:
Q  58 gttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||| || |||||||||||||| ||||||||||||||    
T  32637123 gttactactttcctttactccacacatcatagtttgtattggtgtg 32637168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 538318 - 538365
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||| |||||||| ||||||||||||||||| ||| ||||||||||    
T  538318 tggttattactttcctttgctccacacatcatagtttatattggtgtg 538365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 13488498 - 13488545
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||| |||||||| || |||||||||||||| ||||||||||||||    
T  13488498 tggttattactttcctttactccacacatcatattttgtattggtgtg 13488545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 42426106 - 42426059
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||  ||||||||||||||||| |||||||| |||||    
T  42426106 tggttactactttcttttgctccacacatcatagtttgtatttgtgtg 42426059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 37439454 - 37439510
Alignment:
Q  72 ttgctccacacatcatacttt---gtattggtgtgtttttgtacggaattcacaaca 125  Q
    ||||||||||||||||| |||   ||||||||||| |||||| ||||||||||||||    
T  37439454 ttgctccacacatcatagttttttgtattggtgtgattttgtccggaattcacaaca 37439510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 40382555 - 40382657
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttg-ttggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||| ||||||||||| ||| ||||  ||||||||||||   || ||||||||||||    
T  40382555 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctccgccgctccacacatcattattctttgtattggt 40382654  T
Q  101 gtg 103  Q
    |||    
T  40382655 gtg 40382657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 7e-39; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 7779920 - 7779802
Alignment:
Q  8 agatctaggtgctgtttt-gttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||| ||||||||||| ||    
T  7779920 agatctaggtgctgtttttgttgattattgcttgcacacactttgttggtggttaccactctcctttgctccacacatcttacttcgtattggtgtggtt 7779821  T
Q  107 ttgtacggaattcacaaca 125  Q
    |||||||||||||||||||    
T  7779820 ttgtacggaattcacaaca 7779802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 23200055 - 23199937
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgtttt 107  Q
    ||||||||||| | | ||||||||| |||||||||| |||||||||  ||||||||||||||| |||||||||| ||||||||||||||||||||| |||    
T  23200055 agatctaggtgttttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacatatcatactttgtattggtgtggttt 23199956  T
Q  108 tgtacggaattcacaacaa 126  Q
    |||||||||||||||||||    
T  23199955 tgtacggaattcacaacaa 23199937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 801338 - 801435
Alignment:
Q  8 agatctaggtgctgtttt--gttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||| || |||||||||||||||| ||||||||||||||||| || |||||||||||    
T  801338 agatctaggtgctgttttttgttgattattgcttgcacacactttattagtggttactactttcctttgctccacacatcatatttcgtattggtgtg 801435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 23197814 - 23197744
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttgtacggaattcacaacaa 126  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  23197814 tggttactactttcctttgctccacatatcatactttgtattggtgtggttttgtacggaattcacaacaa 23197744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 5258063 - 5257967
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||||  |||||||||  ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  5258063 agatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactactttcctttgctccacacatcatagttcgtattggtgtg 5257967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 5260242 - 5260149
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggt 100  Q
    ||||||||||| |||| ||||||||| |||||||||| |||||||||  ||||||||||||||| ||||||||||||||||| || ||||||||    
T  5260242 agatctaggtgttgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatcatagttcgtattggt 5260149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 40735631 - 40735751
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| ||| |||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||    
T  40735631 agatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatcataatttgtattggtgtgatt 40735730  T
Q  107 ttg-tacggaattcacaacaa 126  Q
    ||| ||| |||||||||||||    
T  40735731 ttgataccgaattcacaacaa 40735751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 45283239 - 45283337
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcaca--cactttgtt-ggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| ||||||||||||| |||||||||||  ||||||||| |||||||||  || ||||| |||||||||||||| |||||||||||||||    
T  45283239 agatctaggtggtgttttgttgattattgcttgcacaaacactttgtttggtggttaccgctctccgtcgctccacacatcattctttgtattggtgtg 45283337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 9636043 - 9635941
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||    
T  9636043 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgatt 9635944  T
Q  107 ttg 109  Q
    |||    
T  9635943 ttg 9635941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 45095412 - 45095530
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||| |||||||| ||||||||| |||||||  | ||||||| |  ||||||||||||||| |||||| |||||||||| ||||||||| |||| ||    
T  45095412 agatctatgtgctgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgctctacacatcatagtttgtattgatgtgatt 45095511  T
Q  107 ttgtacggaattcacaaca 125  Q
    |||||  ||||||||||||    
T  45095512 ttgtatagaattcacaaca 45095530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 9581532 - 9581652
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||  | ||||||| |  ||||||||||||||| ||||| ||||||||||| ||| |||||||||| ||    
T  9581532 agatctaggtgctgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgcttcacacatcatagtttatattggtgtgatt 9581631  T
Q  107 tt--gtacggaattcacaaca 125  Q
    ||  || ||||||||||||||    
T  9581632 ttgagtccggaattcacaaca 9581652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 6716752 - 6716851
Alignment:
Q  8 agatctaggtgctgttttg-ttgattgttgcttgcacacac--tttgtt-ggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| ||||||| |||||| ||||||||||||||  |||||| |||||||||  ||||||||||||||||||||||  ||||| |||||||||    
T  6716752 agatctaggtggtgttttggttgattattgcttgcacacacactttgtttggtggttaccgctttccgttgctccacacatcactctttgcattggtgtg 6716851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 19683807 - 19683711
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||    ||||||| |  ||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  19683807 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccaaacatcatagtttgtattggtgtg 19683711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 54635376 - 54635475
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttg--cacacactttg-ttggtggttactactttccgttgctccacacatca-tactttgtattggtgtg 103  Q
    ||||||||||| ||||||||||||| |||||||  ||||||||||| ||||||||||| ||| ||| ||||||||||||||| || || |||||||||||    
T  54635376 agatctaggtggtgttttgttgattattgcttgcacacacactttgtttggtggttaccactctcctttgctccacacatcattatttagtattggtgtg 54635475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 40734795 - 40734866
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg-tacggaattcacaacaa 126  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||  || |||||||||||||    
T  40734795 tggttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagaccgaattcacaacaa 40734866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 9634740 - 9634639
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||    ||||||| |  ||||||||||||||| |||||||||| |||||| |||||||||||||| ||    
T  9634740 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccaca-atcatagtttgtattggtgtgatt 9634642  T
Q  107 ttg 109  Q
    |||    
T  9634641 ttg 9634639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 7764714 - 7764834
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||    ||||||| |  ||||||||||||||| || || ||||||||||| |||||||||||||  ||    
T  7764714 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttacttcacacatcatagtttgtattggtgtagtt 7764813  T
Q  107 tt--gtacggaattcacaaca 125  Q
    ||  || ||||||||||||||    
T  7764814 ttgagtccggaattcacaaca 7764834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 22834877 - 22834824
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  22834877 tggttactactttcctttgctccacacatcatagtttgtattggtgtgattttg 22834824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 37408708 - 37408804
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| ||| |||  | ||||||  |  ||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  37408708 agatctaggtgctgttattgttgattattgtttgtgctcactttaatattggttactactttcctttgctccacacatcatattttgtattgatgtg 37408804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 761142 - 761189
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  761142 tggttactactttcctttgctccacacatcatagtttgtattggtgtg 761189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 7762515 - 7762610
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgt 102  Q
    ||||||||||| |||| ||||||||| || ||||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  7762515 agatctaggtgttgttattgttgattattacttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 7762610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 29196260 - 29196213
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  29196260 tggttactactttcctttgctccacacatcatagtttgtattggtgtg 29196213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 39153235 - 39153188
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  39153235 tggttactactttcctttgctccacacatcatagtttgtattggtgtg 39153188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 29682657 - 29682726
Alignment:
Q  59 ttactactttccgttgctccacacatcatactttgtattggtgtg--tttttgt-acggaattcacaaca 125  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||  |||||||  ||||||||||||||    
T  29682657 ttactactttcctttgctccacacatcatagtttgtattggtgtgattttttgtgtcggaattcacaaca 29682726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 9666340 - 9666287
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| |||||||||| |||||| |||||||||||||| |||||    
T  9666340 tggttactactttcctttgctccacagatcatagtttgtattggtgtgattttg 9666287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 29811117 - 29811213
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||    | |||||    ||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  29811117 agatctaggtgctgttattgttgattattgcttgtgttctctttgaaattggttactactttcctttgctccacaaatcatattttgtattggtgtg 29811213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 29813310 - 29813406
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| ||| |||    ||||||| |  | ||||||||||| | ||||||||||||||||| ||||||||||||||    
T  29813310 agatctaggtgctgttattgttgattattgtttgtgttcactttgatattagttactacttttctttgctccacacatcatagtttgtattggtgtg 29813406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 16499302 - 16499365
Alignment:
Q  46 actttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    |||||| || ||||||||||||||| ||||||||||||| ||| ||||||||| |||| |||||    
T  16499302 actttgatgttggttactactttcctttgctccacacattatagtttgtattgatgtgattttg 16499365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 37406987 - 37407034
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  37406987 tggttactactttcctttgctccacacatcatattttgtagtggtgtg 37407034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 3617703 - 3617805
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatcatac---tttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| ||||| |||||||||||||| |   |||||||||||    
T  3617703 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattcttatttgtattggt 3617802  T
Q  101 gtg 103  Q
    |||    
T  3617803 gtg 3617805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 25637683 - 25637785
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcaca---cactttgtt-ggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| ||  ||||||||||   ||||||||| ||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  25637683 agatctaggtggtgttttgttgtttcctgcttgcacaatacactttgttaggtggttaccactctccgtcgctccacacatcattattctttgtattggt 25637782  T
Q  101 gtg 103  Q
    |||    
T  25637783 gtg 25637785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 51399063 - 51399165
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| ||||| |  | ||||||| |  || || ||||||||| |||||||| |||||||| ||||||||||| || ||    
T  51399063 agatctaggtgctgttattgttgattattgctagtgctcactttgatattgttttctactttcctttgctccatacatcatagtttgtattggtatgatt 51399162  T
Q  107 ttg 109  Q
    |||    
T  51399163 ttg 51399165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 2074952 - 2074900
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||    
T  2074952 tggttactactttcctttgctccacacatcatagttt-tattggtgtgattttg 2074900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 23391783 - 23391736
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||| |||||||| || |||||||||||||| ||||||||||||||    
T  23391783 tggttattactttccttttctccacacatcatagtttgtattggtgtg 23391736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 31314740 - 31314791
Alignment:
Q  58 gttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    |||| |||||||| |||||||| |||||||| |||||||||||||| |||||    
T  31314740 gttattactttcctttgctccatacatcatagtttgtattggtgtgattttg 31314791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 43403586 - 43403529
Alignment:
Q  72 ttgctccacacatcatactttgtattggtgtg---tttttgtacggaattcacaacaa 126  Q
    ||||||||||||||||| ||||||||||||||   |||| || |||||||||||||||    
T  43403586 ttgctccacacatcatagtttgtattggtgtgaaattttagtccggaattcacaacaa 43403529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 5236324 - 5236274
Alignment:
Q  59 ttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||  | |||||||||||||| |||||||||||||| |||||    
T  5236324 ttactactttcctgtactccacacatcatagtttgtattggtgtgattttg 5236274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 27305587 - 27305536
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| ||  |||||||||| |||||    
T  27305587 tggttactactttcctttgctccacacatcatagtt--tattggtgtgattttg 27305536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 23410200 - 23410155
Alignment:
Q  58 gttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||| ||| ||||||||||||| ||||||||| ||||    
T  23410200 gttactactttcctttgatccacacatcatagtttgtattgatgtg 23410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 44700354 - 44700301
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||| | ||||||||  ||||||| |||||||||||||| |||||    
T  44700354 tggttactacttttctttgctccatgcatcatagtttgtattggtgtgattttg 44700301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 72; Significance: 3e-32; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 11078 - 10959
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||| ||   ||||||||||||||| |||||||||| ||||||||||||||||||||| ||    
T  11078 agatctaggtgttgttattgttgattattgcttgcacccacttagtcattggttactactttcctttgctccacatatcatactttgtattggtgtggtt 10979  T
Q  107 ttgtacggaattcacaacaa 126  Q
    ||||||||||||||||||||    
T  10978 ttgtacggaattcacaacaa 10959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 8652 - 8533
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||| ||   ||||||||||||||| |||||||||  ||||||||||||||||||||| ||    
T  8652 agatctaggtgttgttattgttgattattgcttgcacccacttagtcattggttactactttcctttgctccacgtatcatactttgtattggtgtggtt 8553  T
Q  107 ttgtacggaattcacaacaa 126  Q
    |||||| |||||||||||||    
T  8552 ttgtacagaattcacaacaa 8533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 3e-32; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 51765648 - 51765767
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||||| |||||  || |||||||||||||||| ||||||||||||||||| || ||||||||||| ||    
T  51765648 agatctaggtgttgttattgttgattattgcttgcactcacttaattagtggttactactttcctttgctccacacatcatatttcgtattggtgtggtt 51765747  T
Q  107 ttgtacggaattcacaacaa 126  Q
    ||||||||||||||||||||    
T  51765748 ttgtacggaattcacaacaa 51765767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 20622154 - 20622033
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacac--tttgtt-ggtggttactactttccgttgctccacacatcatactttgtattggtgtgt 104  Q
    ||||||||||| ||||||||||||| ||||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||||| |||  ||||||     
T  20622154 agatctaggtggtgttttgttgattattgcttgcacacacactttgtttggtggttactactttcctttgctccacacatcatacttggtacaggtgtgg 20622055  T
Q  105 ttttgtacggaattcacaacaa 126  Q
    ||| ||  ||||||||||||||    
T  20622054 tttcgttaggaattcacaacaa 20622033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 40282628 - 40282750
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacac--tttgtt--ggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| ||||||||||||| ||||||||||||||  ||||||  ||||||||| ||| ||| ||||||||||||||||| |||| |||||||||    
T  40282628 agatctaggtggtgttttgttgattattgcttgcacacacactttgttttggtggttaccactctcctttgctccacacatcatagtttgcattggtgtg 40282727  T
Q  104 tttttgtacggaattcacaacaa 126  Q
     ||| || ||| |||||||||||    
T  40282728 gtttcgtccgggattcacaacaa 40282750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 9987453 - 9987551
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttg-ttggtggttactactttccgttgctccacacatcatacttt--gtattggtgtg 103  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||| |||  |||||||||||    
T  9987453 agatctaggtggtgttttgttgattattgcttgcacacactttgattggtggttaccactctcctttgctccacacatcatatttttcgtattggtgtg 9987551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 21054209 - 21054307
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttg-ttggtggttactactttccgttgctccacacatcatact--ttgtattggtgtg 103  Q
    ||||||||||| ||||||||||||| |||||||||||||||| | ||||||||||| ||| ||| ||||||||||||||||| |  |||||||||||||    
T  21054209 agatctaggtggtgttttgttgattattgcttgcacacacttagtttggtggttaccactctcctttgctccacacatcatatttcttgtattggtgtg 21054307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 13316271 - 13316169
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||||  |||||||||  || |||||||||||| ||||||||||||| ||| || ||||||||||| ||    
T  13316271 agatctaggtgctgttattgttgattattgcttgcattcactttgttattgattactactttcctttgctccacacattatatttcgtattggtgtgatt 13316172  T
Q  107 ttg 109  Q
    |||    
T  13316171 ttg 13316169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 20762917 - 20763019
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| ||||||| |  ||||||| |  |||||| |||||||| ||||||||||||||||| |||||||||||||| ||    
T  20762917 agatctaggtgctgttattgttgattattgcttgaattcactttgatattggttaatactttcctttgctccacacatcatagtttgtattggtgtgatt 20763016  T
Q  107 ttg 109  Q
    |||    
T  20763017 ttg 20763019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 9036669 - 9036767
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac--acactttg-ttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| |||||||||| |||||||||||||  |||||||| ||||||||||| ||| ||| | |||||||||||||| ||||| |||||||||    
T  9036669 agatctaggtggtgttttgttgtttgttgcttgcacaaacactttgtttggtggttaccactctccttagctccacacatcatcctttgcattggtgtg 9036767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 8550703 - 8550601
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||    
T  8550703 agatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgatt 8550604  T
Q  107 ttg 109  Q
    |||    
T  8550603 ttg 8550601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 49918599 - 49918701
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||| ||||||||||| ||||||||| |||||||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||    
T  49918599 agatataggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgatt 49918698  T
Q  107 ttg 109  Q
    |||    
T  49918699 ttg 49918701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 3157114 - 3157205
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattg 98  Q
    |||||||||||||||| ||||||||| |||||||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||    
T  3157114 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattg 3157205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 834040 - 833987
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  834040 tggttactactttcctttgctccacacatcatagtttgtattggtgtgattttg 833987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 37559784 - 37559688
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||    ||||||| |  ||||||||||||||| |||||||| |||||||| ||| ||||||||||    
T  37559784 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccagacatcatagtttatattggtgtg 37559688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 13137851 - 13137804
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  13137851 tggttactactttcctttgctccacacatcataatttgtattggtgtg 13137804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 40122071 - 40122018
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||    
T  40122071 tggttactactttcctttgctccacgcatcatagtttgtattggtgtgattttg 40122018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 45644228 - 45644175
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||    
T  45644228 tggttactactttcctttgctccacacatcatagtttgtatttgtgtgattttg 45644175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 50167050 - 50166997
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||    
T  50167050 tggttactactttcctttgctccacacatcatagtttgttttggtgtgattttg 50166997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 196780 - 196733
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  196780 tggttactattttcctttgctccacacatcataatttgtattggtgtg 196733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 13659231 - 13659168
Alignment:
Q  46 actttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    |||||| || ||||||||||||||| ||||||||||||| ||| ||||||||| |||| |||||    
T  13659231 actttgatgttggttactactttcctttgctccacacattatagtttgtattgatgtgattttg 13659168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 50169085 - 50169030
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttgta 111  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||||| |||||||    
T  50169085 tggttactactttcatttgcttcacacatcatagtttgtattggtgtgattttgta 50169030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 3189642 - 3189696
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttgt 110  Q
    ||||||||||||||| |||||||| |||||||| ||| |||||||||| ||||||    
T  3189642 tggttactactttcctttgctccagacatcatagtttatattggtgtgattttgt 3189696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 3198459 - 3198513
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttgt 110  Q
    ||||||||||||||| |||||||| |||||||| ||| |||||||||| ||||||    
T  3198459 tggttactactttcctttgctccagacatcatagtttatattggtgtgattttgt 3198513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 3207298 - 3207352
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttgt 110  Q
    ||||||||||||||| |||||||| |||||||| ||| |||||||||| ||||||    
T  3207298 tggttactactttcctttgctccagacatcatagtttatattggtgtgattttgt 3207352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 10925471 - 10925573
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||    ||||||| |  || |||||||||||| |||||||||||| |||| ||||||||| |||| ||    
T  10925471 agatctaggtgttgttattgttgattattgcttgtgttcactttgatattgattactactttcctttgctccacacaacatagtttgtattgttgtgatt 10925570  T
Q  107 ttg 109  Q
    |||    
T  10925571 ttg 10925573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 44203885 - 44203987
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttg-ttggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||| ||||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  44203885 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggt 44203984  T
Q  101 gtg 103  Q
    |||    
T  44203985 gtg 44203987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 28223292 - 28223248
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggt 100  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||    
T  28223292 tggttactactttcgtttgctccacacatcatagtttgtattggt 28223248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 30476317 - 30476270
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| || |||||||||| ||| ||||||||||||||    
T  30476317 tggttactactttcctttactccacacattatagtttgtattggtgtg 30476270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 37503426 - 37503379
Alignment:
Q  62 ctactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||| || |||||||||||||| |||||||||||||| |||||    
T  37503426 ctactttcctttactccacacatcatagtttgtattggtgtgattttg 37503379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 44455409 - 44455511
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| ||| |||    ||||||| |  ||||||| ||||| | || ||||||| |||||| |||||||||||||| ||    
T  44455409 agatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttaccacttttcttttctccacatatcatagtttgtattggtgtgatt 44455508  T
Q  107 ttg 109  Q
    |||    
T  44455509 ttg 44455511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 3846991 - 3846950
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtatt 97  Q
    ||||||||||||||| || |||||||||||||| ||||||||    
T  3846991 tggttactactttcctttactccacacatcatagtttgtatt 3846950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 28265425 - 28265376
Alignment:
Q  60 tactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||| ||||| || |||||||||||||| |||||||||||||| |||||    
T  28265425 tactattttcctttactccacacatcatagtttgtattggtgtgattttg 28265376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 31659536 - 31659589
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||| | || |||||||||||||| ||| |||||||||| |||||    
T  31659536 tggttactacttttcttttctccacacatcatattttatattggtgtgattttg 31659589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 1e-31; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 6097366 - 6097248
Alignment:
Q  8 agatctaggtgctgtttt-gttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||| |||||||||||| ||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || |||||| ||    
T  6097366 agatcaaggtgctgtttttgttgattatagcttgcacacactttgttagtggttactactttccgttgctccacacatcattctttgcatcggtgtggtt 6097267  T
Q  107 ttgtacggaattcacaaca 125  Q
    | || ||||||||||||||    
T  6097266 tcgttcggaattcacaaca 6097248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 2171446 - 2171350
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| || |||||||||||    
T  2171446 agatctaggtgctgttattgttgattattgcttgcacacactttgttagtggttactactttcctttgctccacacatcatagttcgtattggtgtg 2171350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 3072661 - 3072580
Alignment:
Q  22 ttttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| || |||||||||||    
T  3072661 ttttgttgattattgcttgcacacactttgttagtggttactactttcctttgctccacacatcatatttcgtattggtgtg 3072580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 412368 - 412456
Alignment:
Q  38 ttgcacacactttgtt-ggtggttactactttccgttgctccacacatcatactttgtattggtgtgtttttgtacggaattcacaaca 125  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| ||  |||||||||||||    
T  412368 ttgcacacactttgtttggtggttactactttcctttgctccacacatcatacttggtattggtgtggtttcgttaggaattcacaaca 412456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 30834453 - 30834351
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||||  |||||||||  ||||||||| ||||| ||||||||||||||||| || ||||||||||| ||    
T  30834453 agatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactattttcctttgctccacacatcatatttcgtattggtgtgatt 30834354  T
Q  107 ttg 109  Q
    |||    
T  30834353 ttg 30834351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 16555123 - 16555220
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttg-ttggtggttactactttccgttgctccacacatca-tactttgtattggtgtg 103  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||||| || || |||||||||||    
T  16555123 agatctaggtggtgttttgttgtttgttgcttgcacacactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtgtg 16555220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 16578432 - 16578335
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttg-ttggtggttactactttccgttgctccacacatca-tactttgtattggtgtg 103  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||||| || || |||||||||||    
T  16578432 agatctaggtggtgttttgttgtttgttgcttgcacacactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtgtg 16578335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 16616948 - 16617045
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttg-ttggtggttactactttccgttgctccacacatca-tactttgtattggtgtg 103  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||||| || || |||||||||||    
T  16616948 agatctaggtggtgttttgttgtttgttgcttgcacacactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtgtg 16617045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 16631679 - 16631776
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttg-ttggtggttactactttccgttgctccacacatca-tactttgtattggtgtg 103  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||||| || || |||||||||||    
T  16631679 agatctaggtggtgttttgttgtttgttgcttgcacacactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtgtg 16631776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 16653366 - 16653463
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttg-ttggtggttactactttccgttgctccacacatca-tactttgtattggtgtg 103  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||||| || || |||||||||||    
T  16653366 agatctaggtggtgttttgttgtttgttgcttgcacacactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtgtg 16653463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 5408989 - 5408893
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| |||| ||||||||| |||||||  | ||||||| |  ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  5408989 agatctaggtgttgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 5408893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 5413314 - 5413218
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| |||| ||||||||| |||||||  | ||||||| |  ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  5413314 agatctaggtgttgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 5413218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 27648105 - 27648202
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttg--cacacactttgtt-ggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| ||||||||||||| |||||||  ||||||||||||| ||||||||| ||| ||| |||||||||||||||| | |||||||||||||    
T  27648105 agatctaggtggtgttttgttgattattgcttgcacacacactttgttcggtggttaccactctcctttgctccacacatcattc-ttgtattggtgtg 27648202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 16452247 - 16452145
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| ||||||| |  |||||||||  ||||||||||||||| || |||||||||||||| || ||||||||||| ||    
T  16452247 agatctaggtgatgttattgttgattattgcttgtattcactttgttattggttactactttcctttactccacacatcatagttcgtattggtgtgatt 16452148  T
Q  107 ttg 109  Q
    |||    
T  16452147 ttg 16452145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 9182950 - 9182857
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggt 100  Q
    ||||||||||| |||| ||||||||| |||||||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||||    
T  9182950 agatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggt 9182857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 31404594 - 31404474
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg--t 104  Q
    |||||||||||||||| ||||||||| |||||||  | ||||||| |  || |||||| ||||| ||||||||||||||||| || ||||||| |||  |    
T  31404594 agatctaggtgctgttattgttgattattgcttgtgctcactttgatattgattactattttcctttgctccacacatcatagttcgtattggagtgatt 31404495  T
Q  105 ttttgtacggaattcacaaca 125  Q
    |||||| || |||||||||||    
T  31404494 ttttgtccgaaattcacaaca 31404474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 6136216 - 6136135
Alignment:
Q  10 atctaggtgctgttttgttgattgttgcttgcaca---cactttgtt-ggtggttactactttccgttgctccacacatcat 87  Q
    ||||||||| |||||||||| || |||||||||||   ||||||||| ||||||||| ||| ||||||||||||||||||||    
T  6136216 atctaggtggtgttttgttgtttcttgcttgcacaatacactttgtttggtggttaccactctccgttgctccacacatcat 6136135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 28137281 - 28137211
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg-tacggaattcacaaca 125  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||  || ||||||||||||    
T  28137281 tggttactactttcctttgctccacacgtcatagtttgtattggtgtgattttgagaccgaattcacaaca 28137211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 26954161 - 26954108
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||||| |||||    
T  26954161 tggttactactttcttttgctccacacatcatagtttgtattggtgtgattttg 26954108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 33160221 - 33160149
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg--tttttgtacggaattcacaacaa 126  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||| ||  ||| ||| |||||||||||||||    
T  33160221 tggttactattttcctttgctccacacatcatagtttgtattggtatgattttatgtccggaattcacaacaa 33160149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 25421559 - 25421661
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  25421559 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggt 25421658  T
Q  101 gtg 103  Q
    |||    
T  25421659 gtg 25421661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 5406073 - 5406026
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||| | || |||||||||||||| ||||||||||||||    
T  5406073 tggttactacttttctttactccacacatcatagtttgtattggtgtg 5406026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 5410398 - 5410351
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||| | || |||||||||||||| ||||||||||||||    
T  5410398 tggttactacttttctttactccacacatcatagtttgtattggtgtg 5410351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 6027499 - 6027601
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   |||| ||||| |||||||||  || ||||| ||||||||||||   || ||||||||||||    
T  6027499 agatctaggtggtgttttgttgtttcttgcttgcacaatacaccttgttaggtggttacccctctccgtcgctccacacatcattattctttgtattggt 6027598  T
Q  101 gtg 103  Q
    |||    
T  6027599 gtg 6027601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 3038797 - 3038744
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    |||||| |||||||| |||||| |||||||||| ||||||||||| || |||||    
T  3038797 tggttattactttcctttgctcgacacatcatagtttgtattggtctgattttg 3038744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 11817 - 11911
Alignment:
Q  10 atctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| || |||||||||||    
T  11817 atctaggtgctgttattgttgattattgcttgcacacactttgttagtggttactactttcctttgctccacacatcatagttcgtattggtgtg 11911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 3e-29; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 32289817 - 32289919
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||    
T  32289817 agatctaggtgttgttattgttgattattgcttgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggtt 32289916  T
Q  107 ttg 109  Q
    |||    
T  32289917 ttg 32289919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 6266943 - 6267061
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttg-ttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||| ||| ||| ||||||||||||||||| |||  ||||||||| ||    
T  6266943 agatctaggtgttgttttgttgatttttgcttacacacactttgtttggtggttaccactctcctttgctccacacatcatagtttacattggtgtggtt 6267042  T
Q  107 ttgtacggaattcacaaca 125  Q
    | || ||| ||||||||||    
T  6267043 tcgtccgggattcacaaca 6267061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 4484247 - 4484151
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| |||| ||||||||| |||||||||| |||||||||  ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  4484247 agatctaggtgttgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatcatatttcgtattggtgtg 4484151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 5723175 - 5723055
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg-tt 105  Q
    ||||||||||| |||| ||||||||| ||| |||  | ||||||| |  ||||||||||||| | ||||||||||||||||| |||||||||||||| ||    
T  5723175 agatctaggtgttgttattgttgattattgtttgtgctcactttgatattggttactactttactttgctccacacatcatagtttgtattggtgtgatt 5723076  T
Q  106 tttgtacggaattcacaacaa 126  Q
    |||||||||||||||||||||    
T  5723075 tttgtacggaattcacaacaa 5723055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 4503052 - 4502956
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||||  |||||||||  ||||||||||||||| || |||||||||| ||| ||||||||||||||    
T  4503052 agatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactactttcctttactccacacattatagtttgtattggtgtg 4502956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 36205584 - 36205482
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||    |||||||||  ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||    
T  36205584 agatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttactactttcctttgctccacacatcatagtttgtattagtgtgatt 36205485  T
Q  107 ttg 109  Q
    |||    
T  36205484 ttg 36205482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 17057288 - 17057186
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||    ||||||| |  ||||||||||||||| |||||| |||||||||| |||||||||||||| ||    
T  17057288 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctctacacatcatattttgtattggtgtgatt 17057189  T
Q  107 ttg 109  Q
    |||    
T  17057188 ttg 17057186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 17085271 - 17085169
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||    ||||||| |  ||||||||||||||| |||||| |||||||||| |||||||||||||| ||    
T  17085271 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctctacacatcatattttgtattggtgtgatt 17085172  T
Q  107 ttg 109  Q
    |||    
T  17085171 ttg 17085169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 38312489 - 38312591
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| |||||||||||||||||    ||||||| |  ||||||||||||||| ||||||||||||||||  ||| |||||||||| ||    
T  38312489 agatctaggtgctgttattgttgattgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcattgtttatattggtgtgatt 38312588  T
Q  107 ttg 109  Q
    |||    
T  38312589 ttg 38312591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 30833597 - 30833693
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| |||| ||||||||| |||||||||| ||| |  ||  ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  30833597 agatctaggtgttgttattgttgattattgcttgcactcacataattaatggttactactttcctttgctccacacatcatatttcgtattggtgtg 30833693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 45100003 - 45100099
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||    ||||||| |  ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  45100003 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcataattcgtattggtgtg 45100099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 6594923 - 6594821
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| || ||||    ||||||| |  ||||||||||||| | ||||||||||||||||| |||||||||||||| ||    
T  6594923 agatctaggtgctgttattgttgattattacttgtgttcactttgatattggttactactttactttgctccacacatcatagtttgtattggtgtgatt 6594824  T
Q  107 ttg 109  Q
    |||    
T  6594823 ttg 6594821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 723617 - 723564
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  723617 tggttactactttcctttgctccacacatcatagtttgtattggtgtgattttg 723564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 34139643 - 34139590
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  34139643 tggttactactttcctttgctccacacatcatagtttgtattggtgtgattttg 34139590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 36987945 - 36987892
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  36987945 tggttactactttcctttgctccacacatcatagtttgtattggtgtgattttg 36987892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 42362643 - 42362696
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  42362643 tggttactactttcctttgctccacacatcatagtttgtattggtgtgattttg 42362696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 36773856 - 36773926
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttgta-cggaattcacaaca 125  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||||| ||||| | | ||||||||||||    
T  36773856 tggttactactttcatttgctccacacatcatagtttgtattggtgtgattttgaatccgaattcacaaca 36773926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 2334288 - 2334235
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||    
T  2334288 tggttactactttcctttgcttcacacatcatagtttgtattggtgtgattttg 2334235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 11690787 - 11690832
Alignment:
Q  58 gttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  11690787 gttactactttcctttgctccacacatcatagtttgtattggtgtg 11690832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 14633698 - 14633645
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||    
T  14633698 tggttactactttcctttgcttcacacatcatagtttgtattggtgtgattttg 14633645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 33162324 - 33162271
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| |||| |||||    
T  33162324 tggttactactttcctttgctccacacatcatagtttgtattgatgtgattttg 33162271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 12647301 - 12647199
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  12647301 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggt 12647202  T
Q  101 gtg 103  Q
    |||    
T  12647201 gtg 12647199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 24885883 - 24885936
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||| ||||| ||||| ||||||||||| |||||||||||||| |||||    
T  24885883 tggttactattttcctttgctacacacatcatagtttgtattggtgtgattttg 24885936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 11067598 - 11067635
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttg 93  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  11067598 tggttactactttcctttgctccacacatcatagtttg 11067635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 2e-27; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 31495224 - 31495130
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacac--tttgttggtggttactactttccgttgctccacacatcatactttgtattggt 100  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||| || ||||||||    
T  31495224 agatctaggtgctgttttgttgattattgcttgcacacacactttgttgatggttactactttcctttgctccacacatcatatttcgtattggt 31495130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 13992210 - 13992114
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||||| |||||||||  ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  13992210 agatctaggtgctgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatcatatttcgtattggtgtg 13992114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 48143297 - 48143417
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||    
T  48143297 agatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgatt 48143396  T
Q  107 tt--gtacggaattcacaaca 125  Q
    ||  || ||||||||||||||    
T  48143397 ttgagtccggaattcacaaca 48143417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 52082583 - 52082480
Alignment:
Q  7 aagatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgtt 105  Q
    ||||||||||||||||| ||||||||| |||||||    ||||||| |  ||||||||||||||| ||| ||||||||||||| |||||||||||||| |    
T  52082583 aagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgttccacacatcataatttgtattggtgtgat 52082484  T
Q  106 tttg 109  Q
    ||||    
T  52082483 tttg 52082480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 5370001 - 5369899
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||    ||||||| |  || |||||||||||| || |||||||||||||| |||||||||||||| ||    
T  5370001 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattgattactactttcctttactccacacatcatagtttgtattggtgtgatt 5369902  T
Q  107 ttg 109  Q
    |||    
T  5369901 ttg 5369899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 56178555 - 56178453
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||| ||| |||||||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||    
T  56178555 agatctaggtgttgttattgtttattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgatt 56178456  T
Q  107 ttg 109  Q
    |||    
T  56178455 ttg 56178453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 29999699 - 29999646
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  29999699 tggttactactttcctttgctccacacatcatagtttgtattggtgtgattttg 29999646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 48893513 - 48893460
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  48893513 tggttactactttcctttgctccacacatcatagtttgtattggtgtgattttg 48893460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 26175507 - 26175460
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  26175507 tggttactactttcctttgctccacacatcatagtttgtattggtgtg 26175460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 34570284 - 34570231
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||    
T  34570284 tggttactactttcctttgctccacacatcatagtttatattggtgtgattttg 34570231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 45687057 - 45687004
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||| |||||    
T  45687057 tggttactactttcctttgctccatacatcatagtttgtattggtgtgattttg 45687004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 47038286 - 47038233
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||    
T  47038286 tggttactactttcctttgttccacacatcatagtttgtattggtgtgattttg 47038233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 12743799 - 12743752
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||    
T  12743799 tggttactactttcctttgctccacacaacatagtttgtattggtgtg 12743752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 46147266 - 46147219
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  46147266 tggttactactttcctttgctccacacatcatagtttgcattggtgtg 46147219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 7122936 - 7123038
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  7122936 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggt 7123035  T
Q  101 gtg 103  Q
    |||    
T  7123036 gtg 7123038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 8395857 - 8395959
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttg-ttggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||| ||||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  8395857 agatctaggtggtgttttgttgttttttgcttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggt 8395956  T
Q  101 gtg 103  Q
    |||    
T  8395957 gtg 8395959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 54199827 - 54199725
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||| ||||| |||||||    ||||||| |  ||||||||||||||| |||||||| |||||||  |||||||||||||| ||    
T  54199827 agatctaggtgatgttattgctgattattgcttgtgttcactttgatactggttactactttcctttgctccatacatcatcgtttgtattggtgtgatt 54199728  T
Q  107 ttg 109  Q
    |||    
T  54199727 ttg 54199725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 7125155 - 7125238
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatcat 87  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| ||||| ||||||||||||||    
T  7125155 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcat 7125238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 9927376 - 9927284
Alignment:
Q  10 atctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtg 101  Q
    |||||||||||||| ||||||||| |||||||     |||||| |  |||| |||||||||| ||||||||||||||||| ||| ||||||||    
T  9927376 atctaggtgctgttattgttgattattgcttgtgtttactttgatattggtaactactttcctttgctccacacatcatagtttatattggtg 9927284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 37740926 - 37740970
Alignment:
Q  59 ttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||    
T  37740926 ttactactttcctgtgctccacacatcatagtttgtattggtgtg 37740970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 12739424 - 12739377
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||  || |||||||||||||| ||||||||||||||    
T  12739424 tggttactactttcttttactccacacatcatagtttgtattggtgtg 12739377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 52467228 - 52467181
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||| ||||||| ||||| ||||||||||| ||||||||||||||    
T  52467228 tggttaccactttcctttgcttcacacatcatagtttgtattggtgtg 52467181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 5872115 - 5872166
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||  | |||||||||||||| |||||    
T  5872115 tggttactactttcctttgctccacacatc--agtttgtattggtgtgattttg 5872166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 52095229 - 52095179
Alignment:
Q  59 ttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    |||||||||||| ||| ||||||| ||||| |||||||||||||| |||||    
T  52095229 ttactactttcctttgttccacacgtcatagtttgtattggtgtgattttg 52095179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 36463266 - 36463213
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    |||||| |||||||| || |||||||||||||| |||||||| ||||| |||||    
T  36463266 tggttattactttcctttactccacacatcatagtttgtattagtgtgattttg 36463213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 2e-24; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 19945278 - 19945176
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||||  |||||||||  ||||||||||||||| ||||||||||||||| | |||||||||||||| ||    
T  19945278 agatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactactttcctttgctccacacatcaaagtttgtattggtgtgatt 19945179  T
Q  107 ttg 109  Q
    |||    
T  19945178 ttg 19945176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 2627987 - 2628084
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgtt-gcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| |||| ||||||||| || |||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  2627987 agatctaggtgttgttattgttgattttttgcttgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 2628084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 34254250 - 34254149
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||  | ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  34254250 agatctaggtgctgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgttt 34254151  T
Q  107 tt 108  Q
    ||    
T  34254150 tt 34254149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 25690207 - 25690305
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacac--tttgtt-ggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| ||||||||||||| ||||||||||||||  |||||| ||||||||| ||| ||| |||||||||||||||| |||||||||||||||    
T  25690207 agatctaggtggtgttttgttgattcttgcttgcacacacactttgtttggtggttaccactctcctttgctccacacatcattctttgtattggtgtg 25690305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 34256426 - 34256325
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||  | ||||||  |  ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  34256426 agatctaggtgctgttattgttgattattgcttgtgctcactttaatattggttactactttcctttgctccacacatcatagtttgtattggtgtgttt 34256327  T
Q  107 tt 108  Q
    ||    
T  34256326 tt 34256325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 3439755 - 3439835
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcacacactttg-ttggtggttactactttccgttgctccacacatcat 87  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||  || ||||| ||||||||||||||    
T  3439755 agatctaggtggtgttttgttgattgttgcttgcacacactttgtttggtggttaccgctctccgtcgctccacacatcat 3439835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 31218506 - 31218602
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||||  |||||||||  ||||| ||||||||| ||||||||||||||||| ||| ||||||||||    
T  31218506 agatctaggtgctgttattgttgattattgcttgcattcactttgttattggttgctactttcctttgctccacacatcatagtttatattggtgtg 31218602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 42498444 - 42498562
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||| ||| |||||||    ||||||| |  ||||| ||||||||| ||||||||||||||||| |||||||||||||| ||    
T  42498444 agatctaggtgttgttattgttaattattgcttgtgttcactttgatattggttgctactttcctttgctccacacatcatattttgtattggtgtgatt 42498543  T
Q  107 ttgtacggaattcacaaca 125  Q
    |||| ||||||||||||||    
T  42498544 ttgtccggaattcacaaca 42498562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 17982902 - 17982998
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||||||| ||||||||| |||||||    |||||||||  |||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  17982902 agatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttactacgttcctttgctccacacatcatagtttgtattggtgtg 17982998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 1746138 - 1746036
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| |||||||    |||||||||  ||||||||||||||| || |||||||||||||| || ||||||||||| ||    
T  1746138 agatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttactactttcctttactccacacatcatagttcgtattggtgtgatt 1746039  T
Q  107 ttg 109  Q
    |||    
T  1746038 ttg 1746036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 30143589 - 30143691
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||    ||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||    
T  30143589 agatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgatt 30143688  T
Q  107 ttg 109  Q
    |||    
T  30143689 ttg 30143691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 44304104 - 44304225
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    ||||||||||| |||| ||||||||| |||||||  | ||||||  |  ||||||||||||||| ||||||||||||||||| | |||||||||||| ||    
T  44304104 agatctaggtgttgttattgttgattattgcttgtgctcactttaatattggttactactttcctttgctccacacatcatagtatgtattggtgtgatt 44304203  T
Q  107 tt--gtacggaattcacaacaa 126  Q
    ||  | ||||||||||||||||    
T  44304204 ttgagaacggaattcacaacaa 44304225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 5689565 - 5689635
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg-tacggaattcacaaca 125  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||   ||||||||||||||    
T  5689565 tggttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagtcggaattcacaaca 5689635  T

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Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 41366488 - 41366435
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  41366488 tggttactactttcctttgctccacacatcatagtttgtattggtgtgattttg 41366435  T

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Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 15213035 - 15213131
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||| |||||||||| ||||||||| ||| |||    ||||||| |  ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  15213035 agatcaaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 15213131  T

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Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 4731907 - 4732009
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgttt 106  Q
    |||||||||||||||| ||||||||| ||| |||    ||||||| |   |||||||||||||| ||||||||||||||||  |||||||||||||| ||    
T  4731907 agatctaggtgctgttattgttgattattgtttgtgttcactttgatatcggttactactttcctttgctccacacatcattgtttgtattggtgtgatt 4732006  T
Q  107 ttg 109  Q
    |||    
T  4732007 ttg 4732009  T

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Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 6599263 - 6599316
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  6599263 tggttactactttcctttgctctacacatcatagtttgtattggtgtgattttg 6599316  T

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Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 6674716 - 6674769
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  6674716 tggttactactttcctttgctctacacatcatagtttgtattggtgtgattttg 6674769  T

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Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 12702501 - 12702448
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| |||| |||||    
T  12702501 tggttactactttcctttgctccacacatcatagtttgtattgatgtgattttg 12702448  T

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Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 3303541 - 3303494
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  3303541 tggttaccactttcctttgctccacacatcatagtttgtattggtgtg 3303494  T

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Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 43036720 - 43036767
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  43036720 tggttactactttcctttgctccacacatcattttttgtattggtgtg 43036767  T

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Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 27811527 - 27811632
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatc--atactttgtattggtgtgt 104  Q
    ||||||||||| |||| ||||||||| |||||||    ||||||| |  ||||||||||||||| || |||||||||||  ||| ||||||||||||||     
T  27811527 agatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttcctccacacatcatatagtttgtattggtgtga 27811626  T
Q  105 ttttgt 110  Q
    ||||||    
T  27811627 ttttgt 27811632  T

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Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 18105946 - 18105893
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    ||||||||||||||| |||||| |||||||||| |||||||| ||||| |||||    
T  18105946 tggttactactttcctttgctctacacatcatagtttgtattagtgtgattttg 18105893  T

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Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 4743098 - 4743051
Alignment:
Q  56 tggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||| ||||||| ||||||||||||| ||| ||||||||||||||    
T  4743098 tggttaccactttcctttgctccacacattatagtttgtattggtgtg 4743051  T

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Target: scaffold0002 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 434783 - 434904
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg--t 104  Q
    |||||||||||||||| ||||||||| ||| ||| | |||||||  |  ||||||||||||||| ||||||||||||||||| || |||||||||||  |    
T  434783 agatctaggtgctgttattgttgattattgattgaaaacactttaataatggttactactttcctttgctccacacatcatagttcgtattggtgtgact 434882  T
Q  105 ttttgtacggaattcacaacaa 126  Q
    ||  | ||||||||||||||||    
T  434883 ttgagaacggaattcacaacaa 434904  T

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Target: scaffold0016 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 114901 - 114972
Alignment:
Q  56 tggttactactttccgttgctccacacatcatacttt-gtattggtgtgtttttgtacggaattcacaacaa 126  Q
    |||||| |||||||| ||||||||||||||||| ||| ||||||||||| |||||| |||||||||||||||    
T  114901 tggttattactttcctttgctccacacatcatagttttgtattggtgtgattttgtccggaattcacaacaa 114972  T

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Target: scaffold1519 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 1165 - 1261
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    ||||||||||| |||| ||||||||| |||||||||  ||| ||||   ||||||||||| ||| ||| ||||||||||||| || |||||||||||    
T  1165 agatctaggtggtgttattgttgattattgcttgcattcacattgtcattggttactactatcctttgttccacacatcatagttcgtattggtgtg 1261  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 148992 - 148929
Alignment:
Q  46 actttgttggtggttactactttccgttgctccacacatcatactttgtattggtgtgtttttg 109  Q
    |||||| || ||||||||||||||| ||||||||||||| ||| ||||||||| |||| |||||    
T  148992 actttgatgttggttactactttcctttgctccacacattatagtttgtattgatgtgattttg 148929  T

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Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 2519 - 2417
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttg-ttggtggttactactttccgttgctccacacatc---atactttgtattggt 100  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||| ||||||||||| ||| ||||| ||||||||||||   || ||||||||||||    
T  2519 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggt 2420  T
Q  101 gtg 103  Q
    |||    
T  2419 gtg 2417  T

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Target: scaffold1808 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 118 - 201
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatcat 87  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| ||||| ||||||||||||||    
T  118 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttaggtggttaccactctccgtcgctccacacatcat 201  T

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Target: scaffold0674 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 3641 - 3558
Alignment:
Q  8 agatctaggtgctgttttgttgattgttgcttgcac---acactttgtt-ggtggttactactttccgttgctccacacatcat 87  Q
    ||||||||||| |||||||||| || ||||||||||   | |||||||| ||||||||| ||| ||||| ||||||||||||||    
T  3641 agatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcat 3558  T

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Target: scaffold0066 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 20334 - 20241
Alignment:
Q  8 agatctaggtgctgtt-ttgttgattgttgcttgcacacactttgttggtggttactactttccgttgctccacacatcatactttgtattggt 100  Q
    |||||||||||||||| ||||| ||| |||||||    |||||||    |||||||||| |||| ||||||||||||||||| |||||||||||    
T  20334 agatctaggtgctgttattgttaattattgcttgtgttcactttgacattggttactaccttcctttgctccacacatcatagtttgtattggt 20241  T

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Target: scaffold1668 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 1369 - 1325
Alignment:
Q  59 ttactactttccgttgctccacacatcatactttgtattggtgtg 103  Q
    |||||||||||| |||||||||||||||||  |||||||||||||    
T  1369 ttactactttcctttgctccacacatcatagattgtattggtgtg 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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