View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5491_high_17 (Length: 228)
Name: NF5491_high_17
Description: NF5491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5491_high_17 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 36698081 - 36698301
Alignment:
| Q |
8 |
tcccttaacaaattgacaatatatatagttgtgttatttagttatgatataaaacattaaaaatcgacaacaacttagatgattaatatgtacgtttaac |
107 |
Q |
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| T |
36698081 |
tcccttaacaaattgacaatatatatagctgtgttatttagttatgatataaaacatcaaaaatcgacaacaacttagatgattaatatgtaagtttaac |
36698180 |
T |
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| Q |
108 |
aaatggttaattaatataacaacttataatcatctagtgaatacaattagtcaagtttaattaaccattacttttaggtgttgatcaattgtgtccaaat |
207 |
Q |
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| T |
36698181 |
aaatggttaattaatataacaacttataatcatctagtgaatacaattagtcaagtttcattaaccattacttttaggtgttgatcaattgtgtccaaat |
36698280 |
T |
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| Q |
208 |
atacgtgattttcaaatatac |
228 |
Q |
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| T |
36698281 |
atacgtgattttcaaatatac |
36698301 |
T |
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