View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5491_high_8 (Length: 302)
Name: NF5491_high_8
Description: NF5491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5491_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 8555229 - 8555163
Alignment:
| Q |
75 |
acctaccaatacaatacattacatgcagtagtactctctttcacactcacctaccctctctattcta |
141 |
Q |
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| T |
8555229 |
acctaccaatacaatacattacatgcagtagtactctctttcacactcacctaccctctctattcta |
8555163 |
T |
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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 289
Target Start/End: Complemental strand, 8555043 - 8555015
Alignment:
| Q |
261 |
tgggattatgggaagcagacaaagtagta |
289 |
Q |
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| T |
8555043 |
tgggattatgggaagcagacaaagtagta |
8555015 |
T |
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