View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5491_low_19 (Length: 226)

Name: NF5491_low_19
Description: NF5491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5491_low_19
NF5491_low_19
[»] chr8 (35 HSPs)
chr8 (1-226)||(17264407-17264630)
chr8 (1-226)||(22499345-22499569)
chr8 (1-226)||(23118881-23119105)
chr8 (12-226)||(17499766-17499980)
chr8 (9-226)||(24554623-24554840)
chr8 (1-219)||(23216573-23216788)
chr8 (1-226)||(33170160-33170384)
chr8 (4-226)||(18043195-18043416)
chr8 (7-205)||(45561752-45561952)
chr8 (1-151)||(25607883-25608032)
chr8 (7-226)||(20707697-20707915)
chr8 (35-197)||(11600011-11600173)
chr8 (56-226)||(22725530-22725699)
chr8 (35-197)||(16000121-16000280)
chr8 (1-216)||(7468220-7468432)
chr8 (48-226)||(19334098-19334274)
chr8 (41-226)||(22883699-22883881)
chr8 (14-226)||(24236941-24237151)
chr8 (14-226)||(11541914-11542128)
chr8 (35-151)||(22311040-22311156)
chr8 (95-197)||(24905885-24905987)
chr8 (2-144)||(23350163-23350306)
chr8 (7-219)||(24265911-24266122)
chr8 (73-225)||(18263516-18263667)
chr8 (61-226)||(37655744-37655910)
chr8 (7-226)||(15931232-15931451)
chr8 (7-133)||(26009434-26009558)
chr8 (82-191)||(22317445-22317554)
chr8 (49-118)||(21234093-21234161)
chr8 (38-133)||(29295881-29295974)
chr8 (24-131)||(33613038-33613144)
chr8 (157-219)||(21234223-21234285)
chr8 (173-226)||(23229502-23229555)
chr8 (101-148)||(18120540-18120587)
chr8 (35-76)||(22319695-22319736)
[»] chr3 (37 HSPs)
chr3 (1-218)||(15551936-15552153)
chr3 (1-191)||(6817673-6817863)
chr3 (35-226)||(8602214-8602405)
chr3 (1-226)||(43429578-43429802)
chr3 (1-197)||(5230652-5230848)
chr3 (1-226)||(17320618-17320841)
chr3 (1-219)||(17760844-17761058)
chr3 (1-219)||(19062164-19062378)
chr3 (35-219)||(12950485-12950670)
chr3 (35-226)||(22637241-22637429)
chr3 (40-151)||(37918959-37919070)
chr3 (1-206)||(21168744-21168949)
chr3 (35-145)||(10902469-10902579)
chr3 (1-219)||(41659531-41659749)
chr3 (95-226)||(14182523-14182654)
chr3 (14-206)||(17390934-17391126)
chr3 (7-206)||(18968006-18968204)
chr3 (35-226)||(8687780-8687968)
chr3 (35-226)||(9039649-9039837)
chr3 (14-150)||(25106389-25106524)
chr3 (94-226)||(55513830-55513962)
chr3 (16-226)||(4164298-4164509)
chr3 (16-226)||(6230712-6230923)
chr3 (93-196)||(15988468-15988571)
chr3 (75-226)||(31416331-31416480)
chr3 (40-196)||(40041635-40041795)
chr3 (7-206)||(33371411-33371608)
chr3 (1-151)||(14967816-14967969)
chr3 (30-226)||(11517518-11517715)
chr3 (16-202)||(4147746-4147935)
chr3 (2-118)||(14889902-14890019)
chr3 (35-127)||(20418776-20418868)
chr3 (166-226)||(38378373-38378433)
chr3 (7-219)||(34557785-34557995)
chr3 (173-226)||(12019833-12019886)
chr3 (166-226)||(14820029-14820089)
chr3 (174-226)||(38815672-38815724)
[»] chr7 (42 HSPs)
chr7 (1-226)||(17948066-17948290)
chr7 (1-226)||(9640961-9641185)
chr7 (35-226)||(39294226-39294417)
chr7 (5-226)||(12245601-12245822)
chr7 (1-226)||(9323098-9323322)
chr7 (35-151)||(17922970-17923086)
chr7 (40-226)||(18081378-18081562)
chr7 (7-226)||(31499154-31499375)
chr7 (2-226)||(3194060-3194284)
chr7 (1-218)||(4482185-4482401)
chr7 (51-226)||(21677588-21677760)
chr7 (1-196)||(15980553-15980746)
chr7 (49-226)||(28388374-28388548)
chr7 (35-151)||(17926807-17926923)
chr7 (7-226)||(14938617-14938836)
chr7 (7-226)||(15366210-15366429)
chr7 (62-226)||(16381822-16381984)
chr7 (7-226)||(48345497-48345714)
chr7 (2-219)||(14278946-14279160)
chr7 (35-226)||(9058691-9058884)
chr7 (21-226)||(4436794-4437001)
chr7 (39-216)||(4444205-4444385)
chr7 (1-126)||(12182238-12182365)
chr7 (48-151)||(18921154-18921255)
chr7 (48-226)||(20587706-20587884)
chr7 (7-226)||(34243188-34243404)
chr7 (9-86)||(33557949-33558026)
chr7 (87-226)||(28717954-28718093)
chr7 (7-151)||(9609230-9609371)
chr7 (7-151)||(9836802-9836943)
chr7 (97-151)||(13460352-13460406)
chr7 (24-133)||(16930024-16930133)
chr7 (24-133)||(16935407-16935516)
chr7 (42-133)||(4073069-4073159)
chr7 (82-149)||(33555661-33555728)
chr7 (7-143)||(5617450-5617583)
chr7 (35-151)||(15305426-15305542)
chr7 (166-226)||(14303049-14303109)
chr7 (175-226)||(18921267-18921318)
chr7 (168-225)||(18366222-18366279)
chr7 (40-76)||(16370421-16370457)
chr7 (35-151)||(16915634-16915752)
[»] chr4 (25 HSPs)
chr4 (1-226)||(13596060-13596284)
chr4 (5-219)||(47470377-47470592)
chr4 (1-226)||(41919289-41919512)
chr4 (14-226)||(19624085-19624298)
chr4 (35-197)||(5373190-5373351)
chr4 (1-226)||(50224196-50224421)
chr4 (1-226)||(19557242-19557464)
chr4 (44-226)||(14569315-14569497)
chr4 (40-191)||(12136362-12136513)
chr4 (1-99)||(15216281-15216379)
chr4 (1-226)||(10239481-10239705)
chr4 (114-226)||(12729316-12729428)
chr4 (14-198)||(17378244-17378427)
chr4 (48-226)||(13449102-13449277)
chr4 (100-226)||(54366187-54366313)
chr4 (62-219)||(5407088-5407243)
chr4 (1-151)||(19082979-19083130)
chr4 (10-226)||(18241235-18241452)
chr4 (47-118)||(12732212-12732283)
chr4 (7-142)||(41258428-41258558)
chr4 (102-151)||(24236925-24236974)
chr4 (1-61)||(24236980-24237041)
chr4 (24-133)||(7966659-7966768)
chr4 (74-226)||(42706694-42706847)
chr4 (87-133)||(17194573-17194619)
[»] chr6 (24 HSPs)
chr6 (12-226)||(22595711-22595925)
chr6 (1-226)||(29162955-29163180)
chr6 (10-226)||(15006679-15006894)
chr6 (1-226)||(34964841-34965065)
chr6 (1-149)||(22468148-22468296)
chr6 (2-226)||(17858408-17858632)
chr6 (5-196)||(16131196-16131386)
chr6 (7-226)||(12311051-12311268)
chr6 (50-196)||(23218920-23219065)
chr6 (48-226)||(19670445-19670621)
chr6 (35-226)||(16373896-16374088)
chr6 (7-226)||(29603484-29603702)
chr6 (97-226)||(17375846-17375976)
chr6 (102-226)||(19852209-19852333)
chr6 (1-73)||(19852327-19852399)
chr6 (48-219)||(31469602-31469769)
chr6 (93-196)||(21929381-21929484)
chr6 (81-226)||(17085669-17085813)
chr6 (11-226)||(22846032-22846244)
chr6 (7-219)||(25649171-25649379)
chr6 (1-55)||(15295531-15295586)
chr6 (173-226)||(14150487-14150540)
chr6 (166-226)||(6092438-6092498)
chr6 (7-206)||(33540279-33540476)
[»] chr1 (25 HSPs)
chr1 (12-226)||(21041701-21041915)
chr1 (1-226)||(40555284-40555508)
chr1 (1-206)||(41213699-41213902)
chr1 (1-216)||(33383841-33384055)
chr1 (1-226)||(5770236-5770460)
chr1 (46-226)||(78576-78756)
chr1 (7-218)||(5472439-5472653)
chr1 (24-203)||(9293461-9293641)
chr1 (16-219)||(46143694-46143898)
chr1 (7-226)||(50001991-50002210)
chr1 (16-226)||(29217066-29217275)
chr1 (39-226)||(20191672-20191845)
chr1 (1-93)||(40438371-40438463)
chr1 (82-219)||(12891447-12891583)
chr1 (35-226)||(21193070-21193261)
chr1 (48-226)||(18164120-18164294)
chr1 (1-117)||(20820455-20820572)
chr1 (39-90)||(25092904-25092955)
chr1 (114-226)||(25090983-25091095)
chr1 (35-151)||(22837680-22837796)
chr1 (7-226)||(52397569-52397787)
chr1 (35-218)||(37236029-37236214)
chr1 (81-224)||(22148521-22148663)
chr1 (35-133)||(17606929-17607027)
chr1 (155-216)||(40438509-40438570)
[»] chr2 (17 HSPs)
chr2 (1-226)||(6092362-6092585)
chr2 (1-226)||(24271957-24272182)
chr2 (7-226)||(30995029-30995245)
chr2 (35-148)||(18533345-18533458)
chr2 (41-133)||(19643889-19643981)
chr2 (1-99)||(25132254-25132352)
chr2 (38-226)||(43640259-43640446)
chr2 (68-214)||(24839346-24839493)
chr2 (2-147)||(20270922-20271066)
chr2 (40-94)||(25593213-25593267)
chr2 (24-226)||(19435982-19436184)
chr2 (7-226)||(19647994-19648211)
chr2 (7-143)||(32738460-32738593)
chr2 (73-226)||(22137922-22138075)
chr2 (35-93)||(24296642-24296700)
chr2 (168-226)||(24381680-24381738)
chr2 (97-125)||(45620576-45620604)
[»] chr5 (22 HSPs)
chr5 (7-226)||(23236455-23236673)
chr5 (35-180)||(20456636-20456780)
chr5 (35-219)||(14345743-14345926)
chr5 (9-206)||(19871843-19872038)
chr5 (1-151)||(11963579-11963729)
chr5 (41-226)||(16837814-16837998)
chr5 (7-226)||(29911956-29912175)
chr5 (1-226)||(3420871-3421096)
chr5 (1-206)||(5623457-5623662)
chr5 (14-226)||(11765764-11765975)
chr5 (1-206)||(26561826-26562030)
chr5 (40-196)||(23411926-23412081)
chr5 (35-206)||(37985770-37985940)
chr5 (16-226)||(24082024-24082234)
chr5 (7-226)||(24227987-24228204)
chr5 (87-224)||(37483115-37483253)
chr5 (95-175)||(33628385-33628464)
chr5 (7-226)||(6454613-6454833)
chr5 (100-226)||(22879806-22879931)
chr5 (7-95)||(22881440-22881528)
chr5 (177-226)||(11963166-11963215)
chr5 (82-151)||(21829080-21829150)
[»] scaffold0115 (1 HSPs)
scaffold0115 (40-226)||(19250-19435)
[»] scaffold0725 (1 HSPs)
scaffold0725 (35-226)||(6995-7186)
[»] scaffold0216 (1 HSPs)
scaffold0216 (47-226)||(23194-23373)
[»] scaffold0047 (2 HSPs)
scaffold0047 (35-196)||(73357-73518)
scaffold0047 (2-226)||(2159-2382)
[»] scaffold0009 (2 HSPs)
scaffold0009 (35-206)||(99014-99186)
scaffold0009 (14-219)||(256842-257046)
[»] scaffold0561 (1 HSPs)
scaffold0561 (35-226)||(4815-5006)
[»] scaffold0017 (1 HSPs)
scaffold0017 (35-226)||(10194-10384)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-226)||(99056-99282)
[»] scaffold0088 (1 HSPs)
scaffold0088 (35-219)||(45654-45838)
[»] scaffold0005 (1 HSPs)
scaffold0005 (44-226)||(247879-248061)
[»] scaffold0387 (1 HSPs)
scaffold0387 (16-226)||(3078-3290)
[»] scaffold0808 (1 HSPs)
scaffold0808 (2-151)||(5330-5479)
[»] scaffold0331 (1 HSPs)
scaffold0331 (35-198)||(11291-11453)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-151)||(25536-25686)
scaffold0004 (1-206)||(84353-84557)
[»] scaffold0480 (1 HSPs)
scaffold0480 (48-226)||(11086-11264)
[»] scaffold0025 (2 HSPs)
scaffold0025 (2-151)||(2472-2621)
scaffold0025 (24-143)||(51306-51424)
[»] scaffold0442 (3 HSPs)
scaffold0442 (1-198)||(2008-2208)
scaffold0442 (21-98)||(14159-14235)
scaffold0442 (104-206)||(14250-14352)
[»] scaffold0193 (1 HSPs)
scaffold0193 (7-226)||(2852-3070)
[»] scaffold0219 (2 HSPs)
scaffold0219 (16-134)||(26022-26141)
scaffold0219 (90-226)||(26144-26281)
[»] scaffold0601 (1 HSPs)
scaffold0601 (35-125)||(3448-3538)
[»] scaffold0327 (1 HSPs)
scaffold0327 (24-224)||(6948-7147)
[»] scaffold0205 (1 HSPs)
scaffold0205 (35-151)||(4455-4573)
[»] scaffold0049 (1 HSPs)
scaffold0049 (40-151)||(34976-35088)
[»] scaffold0073 (2 HSPs)
scaffold0073 (35-151)||(49476-49594)
scaffold0073 (35-151)||(54007-54125)
[»] scaffold0021 (2 HSPs)
scaffold0021 (7-151)||(19860-20001)
scaffold0021 (7-151)||(29436-29577)
[»] scaffold0151 (1 HSPs)
scaffold0151 (7-143)||(31688-31824)
[»] scaffold0031 (1 HSPs)
scaffold0031 (2-226)||(99233-99455)
[»] scaffold0010 (2 HSPs)
scaffold0010 (2-143)||(29098-29236)
scaffold0010 (55-150)||(123517-123612)
[»] scaffold0148 (1 HSPs)
scaffold0148 (48-226)||(35833-36007)
[»] scaffold0357 (1 HSPs)
scaffold0357 (7-132)||(5732-5856)
[»] scaffold0174 (2 HSPs)
scaffold0174 (7-226)||(483-703)
scaffold0174 (2-125)||(22599-22723)
[»] scaffold0020 (1 HSPs)
scaffold0020 (77-226)||(103895-104041)
[»] scaffold0032 (2 HSPs)
scaffold0032 (7-226)||(106657-106874)
scaffold0032 (61-151)||(122050-122139)
[»] scaffold0385 (2 HSPs)
scaffold0385 (43-122)||(12545-12624)
scaffold0385 (174-226)||(12677-12729)
[»] scaffold0165 (1 HSPs)
scaffold0165 (48-226)||(20055-20230)
[»] scaffold0080 (1 HSPs)
scaffold0080 (35-219)||(25684-25871)
[»] scaffold0107 (1 HSPs)
scaffold0107 (7-151)||(11423-11564)
[»] scaffold0138 (1 HSPs)
scaffold0138 (24-93)||(18673-18741)
[»] scaffold0057 (1 HSPs)
scaffold0057 (102-226)||(3871-3995)
[»] scaffold0253 (2 HSPs)
scaffold0253 (168-226)||(9619-9677)
scaffold0253 (168-226)||(19044-19102)
[»] scaffold0231 (1 HSPs)
scaffold0231 (87-226)||(15978-16118)
[»] scaffold0086 (2 HSPs)
scaffold0086 (54-124)||(34237-34307)
scaffold0086 (169-226)||(34352-34409)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-66)||(16723-16789)
[»] scaffold1068 (2 HSPs)
scaffold1068 (173-226)||(1229-1282)
scaffold1068 (24-93)||(1293-1362)
[»] scaffold0006 (1 HSPs)
scaffold0006 (106-226)||(199487-199607)
[»] scaffold0786 (1 HSPs)
scaffold0786 (73-226)||(4656-4809)
[»] scaffold0390 (1 HSPs)
scaffold0390 (73-151)||(3265-3342)
[»] scaffold0090 (1 HSPs)
scaffold0090 (7-219)||(7190-7398)
[»] scaffold0001 (1 HSPs)
scaffold0001 (48-226)||(141342-141518)
[»] scaffold0258 (1 HSPs)
scaffold0258 (168-226)||(8214-8272)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-53)||(129961-130013)
[»] scaffold0035 (1 HSPs)
scaffold0035 (180-226)||(64677-64723)
[»] scaffold0503 (1 HSPs)
scaffold0503 (173-226)||(9268-9321)
[»] scaffold0028 (1 HSPs)
scaffold0028 (173-226)||(70511-70564)


Alignment Details
Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 17264630 - 17264407
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17264630 ttattctggatttatttatgttgtggagatttgcccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatactttgg 17264531  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    ||||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  17264530 agatgtatgatttatatccgctgcgactgttgaggattttt--atatgcatgcatgtttggtttttgttgaagacgtagtgtctatttcttgaatattta 17264433  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    | |||| |||||||||||| ||||||    
T  17264432 ttttattcgtgtgttttatcgcttta 17264407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 22499345 - 22499569
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| | |||||    
T  22499345 ttattctggatttatttatgttgtggagatttgcccatttgtcgggatttggagaatttttatgatattgtattttgatctcatggcatgtagactttgg 22499444  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    ||||||||||| |||||||||||| ||||||||  |||||||||||||| |   ||||||| || |||||| ||||||||||||||||||| ||||||||    
T  22499445 agatgtatgatctatatccgctgcaactgttgagaatttttatatatgcct-gttgtttggattttgttgatgacgtagcgtctatttcttgaatattta 22499543  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| |  ||||||||| ||||||    
T  22499544 tattattcacgtgttttatcgcttta 22499569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 23118881 - 23119105
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||| |    
T  23118881 ttattctggatttatttatgttgtggagatttgcccatttgtcgggatttggataatttttatgatgttgtattttgatctcatggcatgtatacttt-g 23118979  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || ||||||||||||||||||||||||||||||  |||||||||||||||||    |||||||| ||||||  || |||||||| |||||| |||||||     
T  23118980 aggtgtatgatttatatccgctgcgactgttgagaatttttatatatgcatattgatttggtttttgttgatcacatagcgtctgtttcttgaatatttt 23119079  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||| ||||||    
T  23119080 tattattcgcgtgttttatcgcttta 23119105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 17499980 - 17499766
Alignment:
Q  12 ttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgat 111  Q
    ||||||| |||||||||||||  |||||||| |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  17499980 ttatttacgttgtggagatttacccatttgttgggattcggagaatttatatgatgatgtattttgattgcatggcatgtatattttggagatgtatgat 17499881  T
Q  112 ttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtg 211  Q
    ||||||||||||||||||||||  | |||||||||| |||     ||| |||| ||||||||||||| |||||||||||| |||||||||||||| || |    
T  17499880 ttatatccgctgcgactgttgagaaattttatatattcatgttgatttagtttttgttgaagacgtaacgtctatttcttgaatatttatattattcgcg 17499781  T
Q  212 tgttttattgcttta 226  Q
    |||||||| ||||||    
T  17499780 tgttttatcgcttta 17499766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 24554623 - 24554840
Alignment:
Q  9 gatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtat 108  Q
    ||||||||||||||||||||||||  ||| ||||||| |||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24554623 gatttatttatgttgtggagatttacccaattgtcggaattcagagaatttatatgatgatgtattttgatctcatggcatgtatactttggagatgtat 24554722  T
Q  109 gatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatattatc 207  Q
    |||||||||||||||||||||||||  |||||||||||| |     ||||||| ||| |||||| ||||| ||||||||||||| ||||||||||||||     
T  24554723 gatttatatccgctgcgactgttgataatttttatatatac-ccgttgtttggatttttgttgatgacgtggcgtctatttcttgaatatttatattatt 24554821  T
Q  208 cgtgtgttttattgcttta 226  Q
    || ||||||||| ||||||    
T  24554822 cgcgtgttttatcgcttta 24554840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 23216788 - 23216573
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||| |    
T  23216788 ttattctggatttatttatgttgtatagatttgcccatttgtcgggaaatggagaatttttatgatgatgtattttgatctcatggcatgtatacttt-g 23216690  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || |||||| |||||||| ||||| ||||||||  ||||||||||||||||   ||||||| || ||||||||||||| |||||||||||| ||||||||    
T  23216689 aggtgtatggtttatatcagctgcaactgttgagaatttttatatatgcat-gttgtttggatt-tgttgaagacgtaacgtctatttcttgaatattta 23216592  T
Q  201 tattatccgtgtgttttat 219  Q
    |||||| || |||||||||    
T  23216591 tattattcgcgtgttttat 23216573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 33170384 - 33170160
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||| |    
T  33170384 ttattctggatttatttatgttgtggagatttgtccatttgtcgggatttggagaattt-tatgatgatgtattttgatctcatgacatgtatacttttg 33170286  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg-tttggtttctgttgaagacgtagcgtctatttcttaaatattt 199  Q
    || ||||||||||||||| ||||| ||| ||||   ||||||||||||| |  ||| ||| |||  |||||| ||||| ||||||||||||| |||||||    
T  33170285 aggtgtatgatttatatctgctgcaactattgagattttttatatatgcct-gatgatttcgttattgttgatgacgtggcgtctatttcttgaatattt 33170187  T
Q  200 atattatccgtgtgttttattgcttta 226  Q
    ||||||| || ||||||||| ||||||    
T  33170186 atattattcgcgtgttttatcgcttta 33170160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 18043195 - 18043416
Alignment:
Q  4 ttctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggaga 103  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||| ||| |||     
T  18043195 ttctggatttatttatgttgtggagatttgctcatttgtcgggatttggagaatctttatgatgatgtattttgacctcatggcatgtatacttttgagg 18043294  T
Q  104 tgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatat 203  Q
    |||||||||||||||  |||| ||||||||  |||||||||||||| |   |||||||  | |||||| || || ||||||||||||| ||||||| |||    
T  18043295 tgtatgatttatatcttctgcaactgttgagaatttttatatatgcct-gttgtttggaatttgttgatgatgtggcgtctatttcttgaatatttgtat 18043393  T
Q  204 tatccgtgtgttttattgcttta 226  Q
    ||| || ||||||||| ||||||    
T  18043394 tattcgcgtgttttatcgcttta 18043416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 45561752 - 45561952
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||| |||    
T  45561752 tggatttatttatgttgtggaggtttgccaatttgtcgggatttggagaatttatatgatgatgtattttgatctcttggcatgtatactcttgaggtgt 45561851  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatatt 204  Q
    |||||||||||||| ||||||||||||  ||||| ||||| ||||     |||||||| ||  |||| || |||||||||||||||| ||||||||||||    
T  45561852 atgatttatatccgatgcgactgttgataattttaatatacgcatgttgatttggtttttgaattgatgatgtagcgtctatttcttgaatatttatatt 45561951  T
Q  205 a 205  Q
    |    
T  45561952 a 45561952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 25608032 - 25607883
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |    
T  25608032 ttattctggacttgtttatgttgtgaagatttgcccaattgtcgggatttggagaattgatatgatgatgtattttgatctcatggcatgtatacttt-g 25607934  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    |||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  25607933 agatgtatgatttatatccgctgcgactgttgagaaaatttatatatgcat 25607883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 20707915 - 20707697
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||||||||||||||||| |  ||||||||||||||||| ||||||| ||||||| ||||||||||||| ||| |||||||| ||| ||| |||    
T  20707915 tggatttatttatgttgtggagatctacccatttgtcgggatttgaagaatttttatgatgttgtattttgatcttatgtcatgtatacttttgaggtgt 20707816  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    ||| ||| |||| ||||| ||||||||  ||||||||||||||||   ||||||| || |||||| || || ||||||||||||| ||||||| ||||||    
T  20707815 atggtttctatctgctgcaactgttgagaatttttatatatgcat-gttgtttggattttgttgatgatgtggcgtctatttcttgaatatttgtattat 20707717  T
Q  207 ccgtgtgttttattgcttta 226  Q
     |  ||||||||| ||||||    
T  20707716 tcacgtgttttatcgcttta 20707697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 197
Target Start/End: Complemental strand, 11600173 - 11600011
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| ||| |||||||| ||||||||||||||||||||||||||||| |||||||||  | |||||||| |||| || |||||||||||||||||||||     
T  11600173 ccatatgttgggatttgaagaatttatatgatgatgtattttgatcttatggcatgtcgactttggagaagtattatctatatccgctgcgactgttgat 11600074  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatat 197  Q
     ||||||||||||||||     ||| |||| |||||||||||||||||||||||||| |||||    
T  11600073 aatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtctatttcttgaatat 11600011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 56 - 226
Target Start/End: Original strand, 22725530 - 22725699
Alignment:
Q  56 atttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacat 155  Q
    |||| ||||||||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||   |    
T  22725530 atttttatgatgatgtatattgatcttatgacatgtatcttttggagatgtatgatttatatccgctgcgactgttgaggaattttatatatgcat-gtt 22725628  T
Q  156 gtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||| | | ||||||||| |||||||||||||||| |||||||  ||||| |  ||||||||| ||||||    
T  22725629 gtttgatatttgttgaagatgtagcgtctatttcttgaatatttggattattcacgtgttttatcgcttta 22725699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 197
Target Start/End: Complemental strand, 16000280 - 16000121
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||| |||||| |||||||||||||||||||||| ||||||||||| ||||||||  || |||||||||||||||||||||||||||||||||||    
T  16000280 ccatatgtcaggatttagagaatttatatgatgatgtatattgatctcatgacatgtatacattagagatgtatgatttatatccgctgcgactgttgaa 16000181  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatat 197  Q
     | |||||| |||||||   || |  |||| ||||||||| ||||||||||||||||||||||    
T  16000180 aaattttatgtatgcat-gttgat--gtttttgttgaagatgtagcgtctatttcttaaatat 16000121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 7468432 - 7468220
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||| || ||||||| ||||| ||||| |||||||||||||  ||| |    
T  7468432 ttattttggatttatttacattgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtattcttttg 7468333  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    |  ||| || |||||||||||||| ||||||||  |||||||||| |   |   ||||||| || |||||| ||||| |||| |||||||| ||||||||    
T  7468332 aagtgtgtggtttatatccgctgcaactgttgagaatttttatatgtctgt---tgtttggattttgttgatgacgtggcgtatatttcttgaatattta 7468236  T
Q  201 tattatccgtgtgttt 216  Q
    |||||| | |||||||    
T  7468235 tattattcatgtgttt 7468220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 19334098 - 19334274
Alignment:
Q  48 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 147  Q
    |||||||||||| ||||||||||||||  ||||||||| ||| |||| |||||||||||||||| ||||||||||||| |||||||  ||| ||||||||    
T  19334098 tttggagaattt-tatgatgatgtattc-gatctcatgacatatatactttggagatgtatgatctatatccgctgcggctgttgagaattcttatatat 19334195  T
Q  148 gcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||   ||||||| ||| |||||| |||||| |||||||||||| |||||||||||||| || ||||||||| ||||||    
T  19334196 gcat-gttgtttggatttttgttgatgacgtaacgtctatttcttgaatatttatattattcgcgtgttttatcgcttta 19334274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 226
Target Start/End: Complemental strand, 22883881 - 22883699
Alignment:
Q  41 gtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttt 140  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||  | |||    
T  22883881 gtcgggatttggagactttatatgatgatgtatattgatctcatggcatgtata-cttggagatgtatgatttatatccgttgcgactgttgagaaattt 22883783  T
Q  141 tatatatgcatacatgtt--tggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||    ||| ||||||  || | | |||||||||||||||||||||||||| ||| | | | |||| || ||||||||| ||||||    
T  22883782 tata----catgcatgttgatgttatttgttgaagacgtagcgtctatttcttgaatttatgttttattcgcgtgttttatcgcttta 22883699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 24237151 - 24236941
Alignment:
Q  14 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 112  Q
    ||||||||||| ||||||| ||| || |||||||| || |||| ||| | |  |||||||| ||||||| ||| |||||||||||||||||||||| |||    
T  24237151 atttatgttgttgagattttgcccatgtgtcgggactttgagattttttgt--tgatgtatattgatcttatgacatgtatattttggagatgtatcatt 24237054  T
Q  113 tatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgt 212  Q
    ||||||| || ||| ||||||  ||||||||||||||||     |||||||| |||||||||||||||||||||||||| |||| ||||||||| ||  |    
T  24237053 tatatccactacgaatgttgagaatttttatatatgcatgttgatttggtttttgttgaagacgtagcgtctatttcttgaata-ttatattattcgcat 24236955  T
Q  213 gttttattgcttta 226  Q
    ||||||| ||||||    
T  24236954 gttttatcgcttta 24236941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 11542128 - 11541914
Alignment:
Q  14 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 112  Q
    ||||||||||| ||||||| ||| || |||||||| ||||||| ||| |||| |||||||  ||||||| ||| |||||||| |||||||||||||||||    
T  11542128 atttatgttgttgagattttgcccatgtgtcgggacttggagatttt-tatgttgatgtaaattgatcttatgacatgtatactttggagatgtatgatt 11542030  T
Q  113 tatatccgctgcgactgttgaagatttttatatatgcatacatgtt----tggtttctgttgaagacgtagcgtctatttcttaaatatttatattatcc 208  Q
    |||||||| | ||||||||||  ||||||||||||  || ||||||    |||||| | ||| ||| |||||||||||||||||||||  | | |||| |    
T  11542029 tatatccgttacgactgttgagaatttttatatat--atgcatgttgatttggtttttattgtagatgtagcgtctatttcttaaataaatgttttattc 11541932  T
Q  209 gtgtgttttattgcttta 226  Q
    | ||||||||| ||||||    
T  11541931 gcgtgttttatcgcttta 11541914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 22311156 - 22311040
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||| ||| ||||||||||||||| | || ||| |||||     
T  22311156 ccatatgtcgggatttggagaatttacatgatgatgtattttgatctcatgacatgaatacttttgaggtgtatgatttatatcagttgggacggttgag 22311057  T
Q  135 gatttttatatatgcat 151  Q
     ||||||||||||||||    
T  22311056 aatttttatatatgcat 22311040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 24905987 - 24905885
Alignment:
Q  95 ttttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaa 194  Q
    |||||||||||||||||||||||||||| ||||||||||  || ||||| |||||||  ||||||||||| |||||||||||||| ||||||||||| ||    
T  24905987 ttttggagatgtatgatttatatccgctacgactgttgagaatatttatgtatgcatgtatgtttggtttttgttgaagacgtagtgtctatttcttgaa 24905888  T
Q  195 tat 197  Q
    |||    
T  24905887 tat 24905885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 23350306 - 23350163
Alignment:
Q  2 tattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||| |||||||||||||||| ||||||||| ||| |||||| ||| |||||||| ||||| |   ||||||| ||||||| | | ||||||||||||||    
T  23350306 tattatggatttatttatgttatggagattttgcccatttgttgggttttggagattttatttatggatgtatgttgatcttacgacatgtatattttgg 23350207  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttata 144  Q
    |||  ||||| ||||||||||||| ||||||||  |||||||||    
T  23350206 agacatatgaattatatccgctgctactgttgagaatttttata 23350163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 24266122 - 24265911
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||| |||||||||  ||| |||||| ||||| |||||||||  |||||||||||| ||||  |||| |||||||| |||| ||  |     
T  24266122 tggatttatt-atgttttggagatttacccagttgtcgagatttcggagaattttgatgatgatgtatgttgacatcatagcatgtatgtttttgaatta 24266024  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatatta 205  Q
    |||  |||||||||||||| ||||||| ||| ||||||| ||||||     ||||  || |||||| ||||| ||||||||||||| |||||||||||||    
T  24266023 tattgtttatatccgctgcaactgttg-agaattttatacatgcatgttgttttgaattttgttgatgacgtggcgtctatttcttgaatatttatatta 24265925  T
Q  206 tccgtgtgttttat 219  Q
    | || |||||||||    
T  24265924 ttcgcgtgttttat 24265911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 73 - 225
Target Start/End: Original strand, 18263516 - 18263667
Alignment:
Q  73 ttttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaa 172  Q
    ||||||| ||||| |||||||| ||| ||| |||||| |||||||||||||||||||||| ||| ||||||| ||| ||     ||||| || ||||||     
T  18263516 ttttgatatcatgacatgtatacttttgaggtgtatggtttatatccgctgcgactgttg-agaattttatacatggatgttgttttggattttgttgat 18263614  T
Q  173 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttt 225  Q
    |||||  |||||||||||| ||| |||||||||| || |||||||||||||||    
T  18263615 gacgtgacgtctatttcttgaatttttatattattcgcgtgttttattgcttt 18263667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 37655744 - 37655910
Alignment:
Q  61 tatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttg 160  Q
    |||||| ||||||||| || |||||||||||||  |||| || | |||| |||||||||||||||||||||||  ||||||||||||||||     ||||    
T  37655744 tatgattatgtattttaatatcatggcatgtatgctttgaag-tatatggtttatatccgctgcgactgttgagaatttttatatatgcatgttgttttg 37655842  T
Q  161 gtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||| ||  |||| |||||||||||||||| || ||||| |  ||||| |||||||||||| ||||||    
T  37655843 gtttttgtattgatgacgtagcgtctattttttgaatatatgaattattcgtgtgttttatcgcttta 37655910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 15931451 - 15931232
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  ||| |||  ||||||||||||| | |||| | || |||| |||| || ||||||| |||||||||||||  |||| || |     
T  15931451 tggatttattcatgttg--gagttttacccatttgtcgggactgggagtacttttatgttgatatacttttgatatcatggcatgtatgctttgaag-ta 15931355  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgttt--ggtttctgt-tgaagacgtagcgtctatttcttaaatatttata 202  Q
    |||| |||||||||||||||||||||||  ||||||||| ||||||   |||||  || || ||| ||| ||||||||||||||||||| ||||| | ||    
T  15931354 tatggtttatatccgctgcgactgttgagaatttttatacatgcat-gttgttttgggattttgtatgatgacgtagcgtctatttcttgaatatatgta 15931256  T
Q  203 ttatccgtgtgttttattgcttta 226  Q
    |||| || ||||||||||||||||    
T  15931255 ttattcgcgtgttttattgcttta 15931232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 26009558 - 26009434
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  |||||||  ||||||||||||| |||||||| || |||| ||||||| ||||||| ||||||||||||| ||||| || |     
T  26009558 tggatttattcatgttg--gagatttacccatttgtcgggacttggagaaattttatgttgatgtagttttgatatcatggcatgtatgttttgaag-ta 26009462  T
Q  106 tatgatttatatccgctgcgactgttga 133  Q
    |||| |||||||||||||| ||||||||    
T  26009461 tatggtttatatccgctgctactgttga 26009434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 191
Target Start/End: Complemental strand, 22317554 - 22317445
Alignment:
Q  82 catggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcg 181  Q
    ||||||||||||| ||| ||| | ||||||||||||||||||| ||||||||  ||||||||||| ||||     |||||||| | ||||||||||| ||    
T  22317554 catggcatgtatacttttgaggtatatgatttatatccgctgccactgttgagaatttttatatacgcatgttgatttggtttttattgaagacgtaacg 22317455  T
Q  182 tctatttctt 191  Q
    ||||||||||    
T  22317454 tctatttctt 22317445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 21234093 - 21234161
Alignment:
Q  49 ttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatc 118  Q
    ||||||||||| ||||||||| ||||||||| ||||| |||||||| ||| ||| |||||||||||||||    
T  21234093 ttggagaattt-tatgatgatatattttgatatcatgacatgtatacttttgaggtgtatgatttatatc 21234161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 29295974 - 29295881
Alignment:
Q  38 tttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 133  Q
    |||||||| | |||||||| || |||||| |||||||| ||| ||||| |||||||| |||| || | |||| |||||||||||||||||||||||    
T  29295974 tttgtcggaacttggagaacttttatgattatgtattt-gatatcatgacatgtatactttgaag-tatatggtttatatccgctgcgactgttga 29295881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 33613038 - 33613144
Alignment:
Q  24 tggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctg 123  Q
    |||||||||  |||||||||| || |||||||| || |||||| |||||||||||| ||||| ||| |||  |||| || | ||| ||||| ||||||||    
T  33613038 tggagatttatccatttgtcgagacttggagaacttttatgattatgtattttgatatcatgacatatatgctttgaag-tatattatttagatccgctg 33613136  T
Q  124 cgactgtt 131  Q
    ||||||||    
T  33613137 cgactgtt 33613144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 21234223 - 21234285
Alignment:
Q  157 tttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttat 219  Q
    |||||||| |||||| || || ||||||||||||| |||||||||||||| || |||||||||    
T  21234223 tttggtttttgttgatgatgtggcgtctatttcttgaatatttatattattcgcgtgttttat 21234285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 23229502 - 23229555
Alignment:
Q  173 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||||||||||||| ||||||  |||||| |||||||||||| ||||||    
T  23229502 gacgtagcgtctatttcttgaatattattattattcgtgtgttttatcgcttta 23229555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 18120540 - 18120587
Alignment:
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatg 148  Q
    |||||||||||||||||||| ||||| ||||||  |||||||||||||    
T  18120540 agatgtatgatttatatccgttgcgaatgttgataatttttatatatg 18120587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 22319736 - 22319695
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtatttt 76  Q
    |||| ||||||||||| |||||||||||||||||||| ||||    
T  22319736 ccatatgtcgggatttagagaatttatatgatgatgtttttt 22319695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 15551936 - 15552153
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||| || |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  15551936 ttattctagacttatttatgttgtggagatttgcccatttgtcgggatttagagaatttatatgatgatgtatattgatctcatgacatgtatattttgg 15552035  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||     |||||||| ||||||||||||| |||||||||||| |||||||     
T  15552036 agatgtatgatttatatctgctgcgactgttgagaatttttatatatgcatgttgatttggtttttgttgaagacgtaacgtctatttcttgaatatttt 15552135  T
Q  201 tattatccgtgtgtttta 218  Q
    |||||| |||||||||||    
T  15552136 tattattcgtgtgtttta 15552153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 6817673 - 6817863
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  6817673 ttattttggatttatttatgttgtgaagatttgcccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatacttttg 6817772  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttctt 191  Q
    || ||||||||||||||||||||||||||||||  ||||||||||||||||     |||||||| |||||| || ||||||||||||||||    
T  6817773 aggtgtatgatttatatccgctgcgactgttgagaatttttatatatgcatgttgatttggtttttgttgatgatgtagcgtctatttctt 6817863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 8602405 - 8602214
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||     
T  8602405 ccatatgtcgggacttggagaatttatatgatgatgtattttgatcttatgacatgtatattttggagatgtatgacttatatccgctgcgactgttgag 8602306  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
     | ||||||||||||||  |||||||| || |||||||||||||||||||||||||| ||||||||||||||  | ||||||||| ||||||    
T  8602305 aaattttatatatgcatgtatgtttggcttttgttgaagacgtagcgtctatttcttgaatatttatattatttgcgtgttttatcgcttta 8602214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 43429578 - 43429802
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |    
T  43429578 ttattctggatttatttatgttgtggagatttgcccatttgttgggatttggagaatttttatgatgatgtattttgatctcatggcatgtatacttttg 43429677  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || |||||| |||||||||||||| ||||||||| |||||||||||||| |     ||| |||| |||||| | ||| ||||||||||||| |||| |||    
T  43429678 aggtgtatggtttatatccgctgcaactgttgaaaatttttatatatgcctgttgattttgtttttgttgatgtcgtggcgtctatttcttgaata-tta 43429776  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||| ||||||    
T  43429777 tattattcgcgtgttttatcgcttta 43429802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 5230652 - 5230848
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||||||  |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||| ||||||    
T  5230652 ttattctatatttatttatgttgtggagatttacccatttgtcgggatttggagattttatatgatgatgtatattgatcttatgacatgtatgttttgg 5230751  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatat 197  Q
    ||||||||||||||||| |||||| ||| ||||  ||||||||||||||||     ||| |||| |||||||||||||||||||||||||| |||||    
T  5230752 agatgtatgatttatatacgctgcaactattgagaatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtctatttcttgaatat 5230848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 17320618 - 17320841
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| | ||| |    
T  17320618 ttattttggatttatttatgttgtggagatttgcccatttgtcgggatttggagaatttttatgatgttgtattttggtctcatggcatgtagactttag 17320717  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    ||||| ||||| ||||||||||||  ||| |||  |||||||||||||| |   ||||||| || |||||| || || ||||||||||| | ||||||||    
T  17320718 agatgaatgatctatatccgctgcagctg-tgagaatttttatatatgcct-gttgtttggattttgttgatgatgtggcgtctatttcctgaatattta 17320815  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||||||||||    
T  17320816 tattattcgcgtgttttattgcttta 17320841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 17760844 - 17761058
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| |||||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  17760844 ttattatggatttatttatgttgttgagatttgccaatttgtcgagatttggagaatttatatgatgatgtattttgatcttatgacatgtatactttgg 17760943  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    |    |||||| |||||||||||||| ||||||  ||||||||||||||||     ||| ||||  ||||||||||||||||| ||||||| |||||||     
T  17760944 a----tatgatctatatccgctgcgaatgttgagaatttttatatatgcatgttaattttgttttcgttgaagacgtagcgtccatttcttgaatatttc 17761039  T
Q  201 tattatccgtgtgttttat 219  Q
     ||||| || |||||||||    
T  17761040 gattattcgcgtgttttat 17761058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 19062164 - 19062378
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| |||||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  19062164 ttattatggatttatttatgttgttgagatttgccaatttgtcgagatttggagaatttatatgatgatgtattttgatcttatgacatgtatactttgg 19062263  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    |    |||||| |||||||||||||| ||||||  ||||||||||||||||     ||| ||||  ||||||||||||||||| ||||||| |||||||     
T  19062264 a----tatgatctatatccgctgcgaatgttgagaatttttatatatgcatgttaattttgttttcgttgaagacgtagcgtccatttcttgaatatttc 19062359  T
Q  201 tattatccgtgtgttttat 219  Q
     ||||| || |||||||||    
T  19062360 gattattcgcgtgttttat 19062378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 219
Target Start/End: Complemental strand, 12950670 - 12950485
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||     
T  12950670 ccatttatcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatacttttgag-ggtatgatttatatccgctgcgactgttgag 12950572  T
Q  135 gatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttat 219  Q
     ||||||||| ||||||     ||| |||| ||  |||| ||||||||||||||||||| |||||||||||||| || |||||||||    
T  12950571 aatttttatacatgcatgttgattttgtttttgaattgatgacgtagcgtctatttcttgaatatttatattattcgcgtgttttat 12950485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 22637429 - 22637241
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||| |||||| |||||||||||||| ||||||| |    
T  22637429 ccatttgtcgggatttggagaatttttatgatgatgtattttgatctcatgacatgtatacttt-gaggtgtatggtttatatccgctgcaactgttg-a 22637332  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||  ||||||||||| |   ||||||| || |||||| ||||| ||||||||||||| |||||||||||||| || ||||||||||||||||    
T  22637331 gaaatttatatatgcct-gttgtttggattttgttgatgacgtggcgtctatttcttcaatatttatattattcgcgtgttttattgcttta 22637241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 37918959 - 37919070
Alignment:
Q  40 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 139  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||    
T  37918959 tgtcgggacttggagaatttttatgatgatgtattttgatctcatgacatgtatattttggagatgtatgatttctatccgctgcgactgttgagaattt 37919058  T
Q  140 ttatatatgcat 151  Q
    ||||||||||||    
T  37919059 ttatatatgcat 37919070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 21168744 - 21168949
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| |||||||||||||||| |||||||||  ||||||||||||||||||||||||| |||||||||||||| |||| ||||| |||||||| | | |    
T  21168744 ttattgtggatttatttatgttttggagatttacccatttgtcgggatttggagaatttttatgatgatgtattgtgatatcatgacatgtatactattg 21168843  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    |  ||||||||||||||||||||| ||||||||  ||||||||| || |||     ||||| || |||||| |||||  |||||||||||| |||| |||    
T  21168844 atgtgtatgatttatatccgctgcaactgttgagaatttttatacatacatgttattttggattttgttgatgacgtgacgtctatttcttgaataatta 21168943  T
Q  201 tattat 206  Q
    ||||||    
T  21168944 tattat 21168949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 35 - 145
Target Start/End: Complemental strand, 10902579 - 10902469
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||||||| ||||||||     
T  10902579 ccatatgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatacttttgaggtgtataatttatatccgctgcaactgttgag 10902480  T
Q  135 gatttttatat 145  Q
     ||||||||||    
T  10902479 aatttttatat 10902469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 41659749 - 41659531
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| ||||||||||||| || |||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||| ||| |    
T  41659749 ttattttggatttatttatattttggagatttacccatttgtcgggatttggagaatttttatgatgatgtattttgatatcatgaaatgtatacttttg 41659650  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || | |||| |||||||||||||| | ||||||  |||||  || |||||| |   ||||| || |||||| |||||   ||||||||||| ||||||||    
T  41659649 aggtttatggtttatatccgctgcaattgttgagaattttattacatgcatgctattttggattttgttgatgacgtgatgtctatttcttgaatattta 41659550  T
Q  201 tattatccgtgtgttttat 219  Q
    |||||| |  |||||||||    
T  41659549 tattattctcgtgttttat 41659531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 95 - 226
Target Start/End: Original strand, 14182523 - 14182654
Alignment:
Q  95 ttttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaa 194  Q
    |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||     |||| ||| |||||||||||||||||||||||||| ||    
T  14182523 ttttggcgatgtatgatttatatccgctgcgaccgttgaaaatttttatatatgcatgttgatttgatttttgttgaagacgtagcgtctatttcttgaa 14182622  T
Q  195 tatttatattatccgtgtgttttattgcttta 226  Q
    |||| ||||||| || ||||||||| ||||||    
T  14182623 tattcatattattcgcgtgttttatcgcttta 14182654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 17391126 - 17390934
Alignment:
Q  14 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 112  Q
    ||||||||||| ||| ||||||| || ||||||||||| |||| |||||||  |||| ||| ||||| | ||| ||||||||||| ||||||||||||||    
T  17391126 atttatgttgttgagttttggcccatatgtcgggatttagagattttatatattgatatatattgattttatgacatgtatattt-ggagatgtatgatt 17391028  T
Q  113 tatatccgctgcgactgttga-agatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    |||||||||||||||||||||   |  |||||||||||||   ||||||   | |||||||||||||||||||||||||| ||||||||||||||    
T  17391027 tatatccgctgcgactgttgagcaaaatttatatatgcat-gttgtttgaaatttgttgaagacgtagcgtctatttcttgaatatttatattat 17390934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 18968204 - 18968006
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||||||||  |||||||||| ||| ||||||||||||||||||||| |||  |||  ||||||||| ||||| ||||||||||||  || |||    
T  18968204 tggatttatttatgtgttggagatttgcccacttgtcgggatttggagaatttttatattgagatattttgatatcatgacatgtatattttttaggtgt 18968105  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    ||| |||||||||||||||||||||| | ||||||||| |||| |     ||||  || |||||| |||||  |||||||||||| ||||||||| ||||    
T  18968104 atgctttatatccgctgcgactgttgga-atttttatacatgcgtgttgttttgaattttgttgatgacgtgacgtctatttcttgaatatttatcttat 18968006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 8687968 - 8687780
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||  ||||  ||||||||||||||||||||||||||||||||     
T  8687968 ccatatgtcgggatttggagattttatatcatgatgtatattgatttcatggcatgtat-gtttgatgatgtatgatttatatccgctgcgactgttgag 8687870  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
     | |||||||||| |||  ||   || | | ||||||||||||| |||||||||||| ||||| |   |||| ||| |||||||| ||||||    
T  8687869 aaattttatatatccat--attgatgttatttgttgaagacgtaacgtctatttcttgaatatatgctttattcgtatgttttatcgcttta 8687780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 9039837 - 9039649
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||  ||||  ||||||||||||||||||||||||||||||||     
T  9039837 ccatatgtcgggatttggagattttatatcatgatgtatattgatttcatggcatgtat-gtttgatgatgtatgatttatatccgctgcgactgttgag 9039739  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
     | |||||||||| |||  ||   || | | ||||||||||||| |||||||||||| ||||| |   |||| ||| |||||||| ||||||    
T  9039738 aaattttatatatccat--attgatgttatttgttgaagacgtaacgtctatttcttgaatatatgctttattcgtatgttttatcgcttta 9039649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 25106389 - 25106524
Alignment:
Q  14 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 112  Q
    ||||||||||| ||||||| ||| || | |||||| ||||||| ||||| |  ||||| || ||||||| |||  |||||||||||||||||||||||||    
T  25106389 atttatgttgttgagattttgcctatgtatcgggacttggagattttatgt--tgatgcatattgatcttatgatatgtatattttggagatgtatgatt 25106486  T
Q  113 tatatccgctgcgactgttgaagatttttatatatgca 150  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  25106487 tatatccgctgcgactgttgaaattttttatatatgca 25106524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 94 - 226
Target Start/End: Original strand, 55513830 - 55513962
Alignment:
Q  94 attttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaa 193  Q
    ||||||||||||||||| ||||||||||||||||||||||  | ||||||||||||||  ||||||||  | ||||||||| |||||||||||||||| |    
T  55513830 attttggagatgtatgacttatatccgctgcgactgttgagaaattttatatatgcatgtatgtttggcctttgttgaagatgtagcgtctatttcttga 55513929  T
Q  194 atatttatattatccgtgtgttttattgcttta 226  Q
    |||| |   |||| || ||||||||| ||||||    
T  55513930 atatctgctttattcgcgtgttttatcgcttta 55513962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 4164298 - 4164509
Alignment:
Q  16 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 114  Q
    ||||||| | |||||||  ||| |||||||||||| |||||||||  ||||||||||||||| || |||||||||||||| ||| ||  | |||| ||||    
T  4164298 ttatgttttagagatttacccaattgtcgggattttggagaattttaatgatgatgtattttaatatcatggcatgtatacttttgaattttatggttta 4164397  T
Q  115 tatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgt 214  Q
    |||||||||    ||||||  ||||||||| ||||||     ||||| || |||||| |||||  |||||||||||| |||||||||||||| || ||||    
T  4164398 tatccgctgtagttgttgagaatttttatacatgcatgttgttttggattttgttgatgacgtgacgtctatttcttgaatatttatattattcgcgtgt 4164497  T
Q  215 tttattgcttta 226  Q
    ||||| ||||||    
T  4164498 tttatcgcttta 4164509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 6230712 - 6230923
Alignment:
Q  16 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 114  Q
    ||||||| |||||||||  ||| |||||||||||| |||||||||  |||||||||||||||||| ||||  |||||||| ||  | | |||||| ||||    
T  6230712 ttatgttttggagatttacccaattgtcgggattttggagaattttgatgatgatgtattttgatatcattacatgtatacttctgcggtgtatggttta 6230811  T
Q  115 tatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgt 214  Q
    ||| ||||||||||||||| |||||||||| ||||||     ||||| ||  ||||| ||||   |||||||||||| ||||||| |||||| ||  |||    
T  6230812 tattcgctgcgactgttgaggatttttatacatgcatgttgttttggatttggttgatgacgcgacgtctatttcttgaatatttgtattattcgcatgt 6230911  T
Q  215 tttattgcttta 226  Q
    ||||| ||||||    
T  6230912 tttatcgcttta 6230923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 15988571 - 15988468
Alignment:
Q  93 tattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttctta 192  Q
    ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||     |||||||| | ||||||||||||||||||||||||     
T  15988571 tattttggagatgtatgatatatatccgctgcgactgttgagaatttttatatatgcatgttgatttggtttttattgaagacgtagcgtctatttcttg 15988472  T
Q  193 aata 196  Q
    ||||    
T  15988471 aata 15988468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 31416331 - 31416480
Alignment:
Q  75 ttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaaga 174  Q
    ||||||||||||||| |||| |||| || |||||| ||||||| |||||| ||||||||  |||||||||||||| |   ||||||| || |||||| ||    
T  31416331 ttgatctcatggcatatatactttg-aggtgtatggtttatattcgctgcaactgttgagaatttttatatatgcctgt-tgtttggattttgttgatga 31416428  T
Q  175 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||| ||||||||||||| |||||||||||||| || ||||||||| ||||||    
T  31416429 cgtggcgtctatttcttgaatatttatattattcgcgtgttttatcgcttta 31416480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 40041635 - 40041795
Alignment:
Q  40 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 139  Q
    |||| ||| ||||||||||||| |||| ||||||||||||||| || ||| |||| ||| ||| ||||||||||||||| | |||||||||| |  ||||    
T  40041635 tgtcaggacttggagaatttatgtgataatgtattttgatctcttgacatatatacttttgaggtgtatgatttatatctgatgcgactgttaagaattt 40041734  T
Q  140 ttatatatgcatacatg-tttggtttctgttgaagacgt---agcgtctatttcttaaata 196  Q
    ||||||||||||   || |||||||| ||||||||||||   |||||||||||||| ||||    
T  40041735 ttatatatgcatgattgatttggtttttgttgaagacgtagcagcgtctatttcttgaata 40041795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 33371411 - 33371608
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||| ||||| |||||||||  | ||||||||||| ||| |||| || |||||| |||||||||||| ||||| || ||||  |||| || | |    
T  33371411 tggatttattcatgtt-tggagatttaccaatttgtcgggacttgaagaacttttatgattatgtattttgatatcatgacaggtatgctttgaag-tat 33371508  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    ||| |||||||||||||||||||||||  ||||||||| ||||||     ||||| || |||| |  |||||| ||||||||||| ||||||||||||||    
T  33371509 atggtttatatccgctgcgactgttgagaatttttatacatgcatgttgttttggattttgttaattacgtagtgtctatttcttgaatatttatattat 33371608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14967969 - 14967816
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccat-ttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatatttt- 98  Q
    ||||| |||||| || |||||||| |||||||  |||  ||||||||||||| ||| |||||||| |||||||| ||||| | ||| ||||||||||||     
T  14967969 ttattttggattgatctatgttgttgagattttaccaacttgtcgggatttgaagattttatatggtgatgtatattgattttatgacatgtatattttt 14967870  T
Q  99 -ggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
     | ||||||||| | |||||||||||||||||||||  | ||||||||||||||    
T  14967869 tgaagatgtatgttatatatccgctgcgactgttgagaaattttatatatgcat 14967816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 226
Target Start/End: Original strand, 11517518 - 11517715
Alignment:
Q  30 tttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtata-ttttggagatgtatgatttatatccgctgcgact 128  Q
    |||| |||| |||||||| ||||||| ||| ||||||||||||| ||||||| ||| |||||||| |||| |||||||||||||| |||| | || |  |    
T  11517518 tttgcccatatgtcgggacttggagatttt-tatgatgatgtatattgatcttatgacatgtatatttttagagatgtatgatttttatctgttgtgttt 11517616  T
Q  129 gttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||| || |||||||||||||||  ||||||  || ||   |||||| ||| |||||||||||| |||||||||||||| || |||| |||| ||||||    
T  11517617 gttgaggaattttatatatgcata-ttgtttgaattttgatgtgaagatgtatcgtctatttcttgaatatttatattattcgcgtgtattatcgcttta 11517715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 4147746 - 4147935
Alignment:
Q  16 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 114  Q
    ||||||| |||||||||  ||| |||||||||||| |||||||||  ||||| |||||||||||| ||||| |||||||| ||| ||  | |||| ||||    
T  4147746 ttatgttttggagatttacccaattgtcgggatttcggagaattttgatgataatgtattttgatatcatgacatgtatacttttgaattttatggttta 4147845  T
Q  115 tatccgctgcgactgttgaagatttttatatatgcatacatg----tttggtttctgttgaagacgtagcgtctatttcttaaatatttata 202  Q
    |||||||||| | ||||||  |||||| ||||  ||| ||||    ||||| || |||||| ||||| ||||||||||||| ||||||||||    
T  4147846 tatccgctgcaattgttgagaatttttttata--catgcatgttgttttggattttgttgatgacgtggcgtctatttcttgaatatttata 4147935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 14890019 - 14889902
Alignment:
Q  2 tattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||| ||||||| |||||||| ||||||||| ||| |||||||||| |||||||| ||||| |   ||||||| ||||||| ||| |||||||| |||||    
T  14890019 tattatggatttttttatgttatggagattttgcccatttgtcgggttttggagattttatttatggatgtatattgatcttatgacatgtatactttgg 14889920  T
Q  101 agatgtatgatttatatc 118  Q
     |||||||||||||||||    
T  14889919 tgatgtatgatttatatc 14889902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 20418868 - 20418776
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgac 127  Q
    |||| |||||||||||||||| ||||| || ||||||||| |||  | ||| |||| |||||||||||||||||| | | |||||||||||||    
T  20418868 ccatatgtcgggatttggagattttatgtggtgatgtattatgagtttatgacatgaatattttggagatgtatgttatttatccgctgcgac 20418776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 38378373 - 38378433
Alignment:
Q  166 tgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||| || ||| ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  38378373 tgttgatgatgtaacgtctatttcttaaatatttatattattcgtgtgttttatcgcttta 38378433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 34557995 - 34557785
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  |||||||  ||||||||||||| || ||||| || |||| ||||||| ||||||  |||||||||||||  |||| || |     
T  34557995 tggatttattcatgttg--gagatttacccatttgtcgggactttgagaacttttatgttgatgtatttttgacatcatggcatgtatgctttgaag-ta 34557899  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatatt 204  Q
    |||| |||||||| | ||||||||||| ||||||||||| ||||||     ||||| |||   |||| |||||| |||||||||||| ||||| | ||||    
T  34557898 tatggtttatatctgttgcgactgttg-agatttttatacatgcatgttgttttggattttatttgatgacgtatcgtctatttcttgaatatatgtatt 34557800  T
Q  205 atccgtgtgttttat 219  Q
    || || |||||||||    
T  34557799 attcgcgtgttttat 34557785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 12019886 - 12019833
Alignment:
Q  173 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||||||||||||||||||| | |||||| || |||||||| |||||||    
T  12019886 gacgtagcgtctatttcttaaatatctgtattattcgcgtgttttactgcttta 12019833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 14820029 - 14820089
Alignment:
Q  166 tgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||| |||||| | |||||||||| |||||||||||||| || ||||||||| ||||||    
T  14820029 tgttgatgacgtaacttctatttcttgaatatttatattattcgcgtgttttatcgcttta 14820089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 38815672 - 38815724
Alignment:
Q  174 acgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||||||||||||||| ||||||  |||||| |||||||||||| ||||||    
T  38815672 acgtagcgtctatttcttgaatattattattattcgtgtgttttatcgcttta 38815724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 17948066 - 17948290
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||| |    
T  17948066 ttattctggatttatttatgttgttgagatttgcccatttgtcgggatttggagaatttttatgatgatgtattttgatctcatgtcatgtatacttttg 17948165  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || ||||||||||||||||||||| ||||||||  ||||||||||||||||   ||||||| || |||||| || |||||||||||||||| ||||||||    
T  17948166 aggtgtatgatttatatccgctgcaactgttgagaatttttatatatgcat-gttgtttggattttgttgatgatgtagcgtctatttcttgaatattta 17948264  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||| ||||||    
T  17948265 tattattcgcgtgttttatcgcttta 17948290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 9641185 - 9640961
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| | |||||    
T  9641185 ttattctggatttatttatgttgtggagatttgcccatttatcgggatttggagaatttttatgatgttgtattttgatctcatggcatgtagactttgg 9641086  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    ||||||||||| |||||||| ||| ||||||||| |||||||||||||| |   ||||||| || |||||| ||||||||||| ||||||| ||||||||    
T  9641085 agatgtatgatctatatccgatgcaactgttgaaaatttttatatatgcct-gttgtttggattttgttgatgacgtagcgtcgatttcttgaatattta 9640987  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    ||| || || ||||||||| ||||||    
T  9640986 tatgattcgcgtgttttatcgcttta 9640961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 35 - 226
Target Start/End: Original strand, 39294226 - 39294417
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||||| | ||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||     
T  39294226 ccatatgtcggtacttgaagaatttatatgatgatgtattttgatctcatggcatgtatactttggatatgtatgatttatatccgctgcgactgttgag 39294325  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
     ||||||||||||||||     |||| ||| | ||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  39294326 aatttttatatatgcatgttgatttgatttttattgtagacgtagcgtctatttcttgaatatttatattattcgtgtgttttatcgcttta 39294417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 12245822 - 12245601
Alignment:
Q  5 tctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggaga 103  Q
    |||||||||||||||||| ||||||||| ||| || |||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  12245822 tctggatttatttatgttatggagattttgcccatatgtcgggatttggagattttatatgatgatgtatattgatcttatgacatgtatattttggaga 12245723  T
Q  104 tgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatat 203  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||   |||||| | | ||||||||||||| ||||||||| || ||||  | | |    
T  12245722 tgtatgatttatatccgctgcgactgttgagaaattttatatatgcat-gttgtttgatatttgttgaagacgtaacgtctatttattgaataaatgttt 12245624  T
Q  204 tatccgtgtgttttattgcttta 226  Q
    ||| || ||||||||||||||||    
T  12245623 tattcgcgtgttttattgcttta 12245601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 9323098 - 9323322
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||||| ||| |    
T  9323098 ttattgtggatttatttatgttgtggagattttcccatttgtcgggatttgaataatttttatgttgatgtattttgatctcatggcatgtatacttttg 9323197  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg-tttggtttctgttgaagacgtagcgtctatttcttaaatattt 199  Q
    || |||||| |||||||||||||| ||||||||  |||||||||||||  | |||| ||| |||  |||||| ||||||||||||||||||| ||||||     
T  9323198 aggtgtatggtttatatccgctgcaactgttgataatttttatatatgtct-catgattttgttattgttgatgacgtagcgtctatttcttgaatattc 9323296  T
Q  200 atattatccgtgtgttttattgcttta 226  Q
    | ||||| || ||||||||| ||||||    
T  9323297 a-attattcgcgtgttttatcgcttta 9323322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 17923086 - 17922970
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  17923086 ccatatgtcaggatttggagaatttatatgatgatgtattttgatctcatgacatgtatactttagagatgtatgatttatatccgctgcgactgttgaa 17922987  T
Q  135 gatttttatatatgcat 151  Q
     ||||||||| ||||||    
T  17922986 aatttttatacatgcat 17922970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 18081378 - 18081562
Alignment:
Q  40 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 139  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |  | ||||||||||||| |||||||||||| ||| ||| ||| ||    
T  18081378 tgtcgggatttggagaatttatatgatgttgtattttgatctcatggcatgtagacctaggagatgtatgatctatatccgctgcaactattg-agaatt 18081476  T
Q  140 ttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||||| |||   ||||||| || |||||| ||||||| ||| ||||||| |||||||||||||| || ||||||||| ||||||    
T  18081477 ttatatatacat-gttgtttggattttgttgatgacgtagagtcaatttcttgaatatttatattattcgcgtgttttatcgcttta 18081562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 31499375 - 31499154
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    ||||||||||||||||||||||||||  ||| |||||||||||| |||||||| |||| |||| ||||||||| ||||| |||| ||| ||| ||| |||    
T  31499375 tggatttatttatgttgtggagatttacccaattgtcgggattttgagaatttttatgttgatatattttgatatcatgacatgcatacttttgaggtgt 31499276  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatatt 204  Q
    ||||||||||||||||||||||||| |  ||||||||| ||||||     ||||| || ||  |||| ||  |  |||||||||||| ||||||||||||    
T  31499275 atgatttatatccgctgcgactgttaagaatttttatacatgcatgttattttggattttgaattgatgatatgacgtctatttcttgaatatttatatt 31499176  T
Q  205 atccgtgtgttttattgcttta 226  Q
    || || ||||||||| ||||||    
T  31499175 attcgcgtgttttatcgcttta 31499154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 3194060 - 3194284
Alignment:
Q  2 tattctggatttatttatgttgtggagatttggc-catttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||| |||||||||  | ||||||||||| |||||||| ||||| |   ||||||| ||||||| ||| ||||||||  ||||    
T  3194060 tattctggatttatttatgttatggagatttcactcatttgtcgggttttggagattttatttatggatgtatgttgatcttatgacatgtatacattgg 3194159  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
     ||| ||||||||||||| | ||||||||||||  ||||||||| ||||||   |||||| | | ||||||| ||||||||||||||| || |||||||     
T  3194160 tgatatatgatttatatctggtgcgactgttgagaatttttataaatgcat-gttgtttgatatttgttgaaaacgtagcgtctattttttgaatatttg 3194258  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||| ||||||    
T  3194259 tattattcgcgtgttttatcgcttta 3194284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 4482401 - 4482185
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| ||||||||||||  | ||||||||||| |||||||||||||||||||||| || ||||||| ||||| ||||| |||||||||||||  |||      
T  4482401 ttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgctttta 4482303  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    |  | |||| |||||||||||||| |||||||||  |||||||| ||||||     ||||| || |||||| || || |||||||||| || ||||||||    
T  4482302 aagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctattttttgaatattta 4482203  T
Q  201 tattatccgtgtgtttta 218  Q
    |||||| |||||||||||    
T  4482202 tattattcgtgtgtttta 4482185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 51 - 226
Target Start/End: Original strand, 21677588 - 21677760
Alignment:
Q  51 ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgca 150  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||| || |||||| |||||||||||||| ||||||||  ||| ||||||||||     
T  21677588 ggagaatttctatgatgatgtattt-gatctcatggcatgtatactttg-aggtgtatggtttatatccgctgcaactgttgagaattcttatatatgcc 21677685  T
Q  151 tacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |  || ||||| || |||||| | ||| ||||||||||||| |||||||||||||| || ||||||||| ||||||    
T  21677686 tg-atatttggattttgttgatggcgtggcgtctatttcttgaatatttatattattcgcgtgttttatcgcttta 21677760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 15980553 - 15980746
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 99  Q
    |||||||| |||||||||||||||||||||||  || || |||||||||||| ||| ||||||||  ||||||| ||| |||  || |||||||||||||    
T  15980553 ttattctgaatttatttatgttgtggagattttacccatatgtcgggatttgaagattttatatgtcgatgtatattgttctt-tgacatgtatattttg 15980651  T
Q  100 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggt-ttctgttgaagacgtagcgtctatttcttaaata 196  Q
     |||||||||||||||||||||||||||||||||  | ||||||||||||||   | |||| | || |||| ||||||||||||||||||||| ||||    
T  15980652 -agatgtatgatttatatccgctgcgactgttgagaaattttatatatgcat--gtttttgatgttttgttcaagacgtagcgtctatttcttgaata 15980746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 226
Target Start/End: Complemental strand, 28388548 - 28388374
Alignment:
Q  49 ttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatg 148  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||| | | ||| ||||||||||||||||||||| ||| ||||  ||||||||| |||    
T  28388548 ttggagaattt-tatgatgatgtattc-gatctcatggcatgtatactcttgaggtgtatgatttatatccgctgcaactattgagaatttttatagatg 28388451  T
Q  149 catacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||    ||||| || |||||| ||||| ||||||||||||| |||| ||||||||| || ||||||||| ||||||    
T  28388450 catattattttggattttgttgaggacgtggcgtctatttcttgaata-ttatattattcgcgtgttttatcgcttta 28388374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 17926923 - 17926807
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| ||||||||||  ||||||||||||||| |||||||||||||||||| ||| |||| ||| |||||||||||| |||||| |||||||||||||||    
T  17926923 ccatatgtcgggattcagagaatttatatgataatgtattttgatctcatgacatatatactttagagatgtatgatgtatatctgctgcgactgttgaa 17926824  T
Q  135 gatttttatatatgcat 151  Q
      |||||||| ||||||    
T  17926823 attttttatacatgcat 17926807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 14938836 - 14938617
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||||||||  |||||||||| ||| |||| ||||||  |||||||| |||  |||  |||||| || |||||||||||||| ||| |||||||    
T  14938836 tggatttatttatgtgttggagatttgcccacttgttgggattcagagaatttttatattgagatatttttatatcatggcatgtatacttttgagatgt 14938737  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    ||||| | ||| ||||||||||||||   ||||||||| ||||||     ||||  || |||||| |||||  |  ||||||||||||||||||||||||    
T  14938736 atgatctttattcgctgcgactgttgggaatttttatacatgcatgttgttttgaattttgttgatgacgtgactactatttcttaaatatttatattat 14938637  T
Q  207 ccgtgtgttttattgcttta 226  Q
     || ||||||||| ||||||    
T  14938636 tcgcgtgttttatcgcttta 14938617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 15366429 - 15366210
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||||||||  |||||||||| ||| |||| ||||||  |||||||| |||  |||  |||||| || |||||||||||||| ||| |||||||    
T  15366429 tggatttatttatgtgttggagatttgcccacttgttgggattcagagaatttttatattgagatatttttatatcatggcatgtatacttttgagatgt 15366330  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    ||||| | ||| ||||||||||||||   ||||||||| ||||||     ||||  || |||||| |||||  |  ||||||||||||||||||||||||    
T  15366329 atgatctttattcgctgcgactgttgggaatttttatacatgcatgttgttttgaattttgttgatgacgtgactactatttcttaaatatttatattat 15366230  T
Q  207 ccgtgtgttttattgcttta 226  Q
     || ||||||||| ||||||    
T  15366229 tcgcgtgttttatcgcttta 15366210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 16381984 - 16381822
Alignment:
Q  62 atgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg 161  Q
    |||| |||||||||||||||||||||||||||| |||| || |||||| ||||||||| |||| ||||||||| | |||| ||||||| |   |||||||    
T  16381984 atgacgatgtattttgatctcatggcatgtatactttgaag-tgtatggtttatatccactgcaactgttgaaaaattttctatatgcct-gttgtttgg 16381887  T
Q  162 tttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
     || ||||||  ||||  | ||||||||||||||||||||||||| || ||||||||| ||||||    
T  16381886 attttgttgataacgtgacatctatttcttaaatatttatattattcgcgtgttttatcgcttta 16381822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 48345714 - 48345497
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  |||||||  ||||||||||||| |||||||| || || | ||||||| ||||||| ||||| |||||||  |||| || |     
T  48345714 tggatttattcatgttg--gagatttacccatttgtcgggacttggagaacttttaagttgatgtatttttgatatcatgacatgtatgctttgaag-ta 48345618  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg-ttgaagacgtagcgtctatttcttaaatatttatatt 204  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||     ||||| || || |||| | ||||||||||||||||| ||||| | ||||    
T  48345617 tatggtttatatccgctgcgactgttg-agatttttatacatgcatgttgttttggattttgtttgatggcgtagcgtctatttcttgaatatatgtatt 48345519  T
Q  205 atccgtgtgttttattgcttta 226  Q
    ||  ||||||||||| ||||||    
T  48345518 atttgtgtgttttatcgcttta 48345497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 14278946 - 14279160
Alignment:
Q  2 tattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttg-atctcatggcatgtatattttgg 100  Q
    |||| |||||||||| ||||||  |||||||  ||||||||||||| |||||||| || |||| |||||||||||  || |||||||||||||  ||||     
T  14278946 tattttggatttattcatgttg--gagatttacccatttgtcgggacttggagaactt-tatgttgatgtattttttatatcatggcatgtatggtttga 14279042  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaa-gacgtagcgtctatttcttaaatattt 199  Q
    || | |||| |||||||||||||||||||||| |||||||| || ||||||     ||||| || |||| || ||||||||||||||||||| ||||| |    
T  14279043 ag-tatatggtttatatccgctgcgactgttg-agatttttgtacatgcatgttgttttggattttgtttaatgacgtagcgtctatttcttgaatatat 14279140  T
Q  200 atattatccgtgtgttttat 219  Q
     |||||| || |||||||||    
T  14279141 gtattattcgcgtgttttat 14279160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 226
Target Start/End: Original strand, 9058691 - 9058884
Alignment:
Q  35 ccatttgtcgggatttgg-agaatttat-atgatgatgtatttt-gatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgtt 131  Q
    ||||||||||||| |||| ||||||| | ||| | ||||||||| ||| ||||||||||||| ||||| || | |||| |||||||||| ||||||||||    
T  9058691 ccatttgtcgggacttgggagaattttttatgtttatgtatttttgatatcatggcatgtatgttttgaag-tatatggtttatatccgatgcgactgtt 9058789  T
Q  132 gaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    || || ||||||| ||||||     ||||| || ||| ||||||||||||||||||||||||||||| |||||||| || |||||| || ||||||    
T  9058790 ga-gaattttatacatgcatgttgttttggattttgtatgaagacgtagcgtctatttcttaaatatatatattattcgcgtgtttgatcgcttta 9058884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 4437001 - 4436794
Alignment:
Q  21 ttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccg 120  Q
    ||||||||||||  || ||||||||||||||||||||||  |||||| | | || |||||| |||||||||||||||  ||| |||||| |||||||| |    
T  4437001 ttgtggagatttaccc-tttgtcgggatttggagaattttcatgatgttattttatgatcttatggcatgtatatttgtgaggtgtatggtttatatctg 4436903  T
Q  121 ctgcgactgttgaagatt----tttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttt 216  Q
     ||| ||||||||  |||    ||||||||||| |   ||||||  || |||||  ||||||||||||||||||| |||||||||| ||| || ||||||    
T  4436902 ttgcaactgttgagaattattatttatatatgc-ttgttgtttgaattttgttgttgacgtagcgtctatttcttgaatatttatactattcgcgtgttt 4436804  T
Q  217 tattgcttta 226  Q
     || ||||||    
T  4436803 aatcgcttta 4436794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 39 - 216
Target Start/End: Complemental strand, 4444385 - 4444205
Alignment:
Q  39 ttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatt 138  Q
    ||||||||||||| |||||||  |||||| ||| || |||| | |||||||||||||||  ||| |||||  |||||||| ||||| ||||||||  |||    
T  4444385 ttgtcgggatttgaagaattttcatgatgttgttttatgatattatggcatgtatatttgtgaggtgtatcgtttatatctgctgcaactgttgagaatt 4444286  T
Q  139 ----tttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttt 216  Q
        ||||||||||| | | ||||||  || |||||  ||||||||||||||||||| |||||||||||||| || ||||||    
T  4444285 attatttatatatgcttgc-tgtttgaattttgttgttgacgtagcgtctatttcttgaatatttatattattcgcgtgttt 4444205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 12182365 - 12182238
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggc-catttgtcgggatttggagaatttatatgatgatgtat-tttgatctcatggcatgtatatttt 98  Q
    ||||| |||||| ||||||||||| |||||||  | || ||||||||| ||||||| |||||||| |||||||| |||||  | ||| ||||||||||||    
T  12182365 ttattttggattgatttatgttgttgagattttactcacttgtcgggaattggagattttatatggtgatgtatgtttgagttgatgacatgtatatttt 12182266  T
Q  99 ggagatgtatgatttatatccgctgcga 126  Q
    ||||||||||| | ||||||| ||||||    
T  12182265 ggagatgtatgttatatatcctctgcga 12182238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 18921154 - 18921255
Alignment:
Q  48 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 147  Q
    ||||||| |||| |||| |||||||||| ||||||||| |||||||| ||| ||| |||||| |||||||||||||||||||||||  ||||||||| ||    
T  18921154 tttggaggattt-tatgttgatgtattt-gatctcatgacatgtataattttgaggtgtatggtttatatccgctgcgactgttgagaatttttatacat 18921251  T
Q  148 gcat 151  Q
    ||||    
T  18921252 gcat 18921255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 20587706 - 20587884
Alignment:
Q  48 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 147  Q
    |||||||||||| |||  |||  |||||| || |||||| ||||||| ||| ||| |||||| ||||||| || |||| |||||||  ||||||||| ||    
T  20587706 tttggagaatttttatattgagatatttttatatcatggtatgtatacttttgaggtgtatggtttatattcgttgcgtctgttgagaatttttatacat 20587805  T
Q  148 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||     ||||| || ||||||||||||   ||||||||||| |||||| ||||||| || ||||||||| ||||||    
T  20587806 gcatgttgttttggattttgttgaagacgtgatgtctatttcttgaatattcatattattcgcgtgttttatcgcttta 20587884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 226
Target Start/End: Original strand, 34243188 - 34243404
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  |||||||  ||||||||||||| |||||||| |  |||| ||||||| ||||||| ||||||||||| || |||| || |     
T  34243188 tggatttattcatgttg--gagatttacccatttgtcgggacttggagaact--tatgttgatgtatttttgatatcatggcatgtgtactttgaag-ta 34243282  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg--tttggtttctg-ttgaagacgtagcgtctatttcttaaatatttata 202  Q
    |||| |||||||| ||||||||||||| ||||||||||| ||||||   ||  ||||| || || |||| |||||||||||||||||||  |||| | ||    
T  34243283 tatggtttatatctgctgcgactgttg-agatttttatacatgcat-gttgaatttggattttgtttgatgacgtagcgtctatttcttgcatatatgta 34243380  T
Q  203 ttatccgtgtgttttattgcttta 226  Q
    |||| || ||||||||| ||||||    
T  34243381 ttattcgcgtgttttatcgcttta 34243404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 33558026 - 33557949
Alignment:
Q  9 gatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatgg 86  Q
    ||||||||| ||||||||||||||  |||  |||||||||||||||||||| |||| |||| ||||||||||||||||    
T  33558026 gatttatttttgttgtggagatttacccaaatgtcgggatttggagaatttttatgttgatatattttgatctcatgg 33557949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 226
Target Start/End: Complemental strand, 28718093 - 28717954
Alignment:
Q  87 catgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctat 186  Q
    |||||||| ||||||| |||||| ||||||||| |||||||||||||  ||||||||| ||||||     ||||| || ||| ||  || | ||||||||    
T  28718093 catgtatactttggaggtgtatggtttatatccactgcgactgttgagaatttttataaatgcatgttgttttggattttgtcgataacatggcgtctat 28717994  T
Q  187 ttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||| ||||||||||| || || ||||||||| ||||||    
T  28717993 ttcttgaatatttatatcattcgcgtgttttatcgcttta 28717954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 151
Target Start/End: Complemental strand, 9609371 - 9609230
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  |||||||  ||| ||||||||| |||||||| || |||| ||||||| |||| || |||||||||||||  |||| || |     
T  9609371 tggatttattcatgttg--gagatttacccacttgtcgggacttggagaacttttatgttgatgtattttttatatcatggcatgtatgctttgaag-ta 9609275  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    |||| |||||||||||||||||||||| |||| |||||| ||||||    
T  9609274 tatggtttatatccgctgcgactgttg-agatatttatacatgcat 9609230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 151
Target Start/End: Complemental strand, 9836943 - 9836802
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  |||||||  ||| ||||||||| |||||||| || |||| ||||||| |||| || |||||||||||||  |||| || |     
T  9836943 tggatttattcatgttg--gagatttacccacttgtcgggacttggagaacttttatgttgatgtattttttatatcatggcatgtatgctttgaag-ta 9836847  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    |||| |||||||||||||||||||||| |||| |||||| ||||||    
T  9836846 tatggtttatatccgctgcgactgttg-agatatttatacatgcat 9836802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 13460406 - 13460352
Alignment:
Q  97 ttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  13460406 ttggtgatgtatgatttatatccgctgcgactgttgagaatttttataaatgcat 13460352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 16930024 - 16930133
Alignment:
Q  24 tggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatgatttatatccgct 122  Q
    |||||||||  |||||| |||||| |||||||| || |||| ||||||| ||||||| |||||||||||||  |||| || | |||| ||||||| ||||    
T  16930024 tggagatttacccatttttcgggacttggagaacttttatgttgatgtatttttgatatcatggcatgtatgctttgaag-tatatggtttatatacgct 16930122  T
Q  123 gcgactgttga 133  Q
    |||||||||||    
T  16930123 gcgactgttga 16930133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 16935407 - 16935516
Alignment:
Q  24 tggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatgatttatatccgct 122  Q
    |||||||||  |||||| |||||| |||||||| || |||| ||||||| ||||||| |||||||||||||  |||| || | |||| ||||||| ||||    
T  16935407 tggagatttacccatttttcgggacttggagaacttttatgttgatgtatttttgatatcatggcatgtatgctttgaag-tatatggtttatatacgct 16935505  T
Q  123 gcgactgttga 133  Q
    |||||||||||    
T  16935506 gcgactgttga 16935516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 4073069 - 4073159
Alignment:
Q  42 tcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 133  Q
    |||||||||||||| ||||||||||||||||| || || | ||| ||| |||||||||  ||| ||||| ||||||||| |||||| |||||    
T  4073069 tcgggatttggagattttatatgatgatgtatattaattttatgccatatatattttgatgatatatgacttatatccg-tgcgaccgttga 4073159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 33555728 - 33555661
Alignment:
Q  82 catggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgc 149  Q
    ||||||||||||| ||| ||| |||||| |||||| ||||||||||||||||   |||||||||||||    
T  33555728 catggcatgtatacttttgaggtgtatggtttatacccgctgcgactgttgagagtttttatatatgc 33555661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 5617583 - 5617450
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  |||||||  ||||||||||||| |||||||| || |||| ||||||| ||||||| ||||| |||||||  || | || |     
T  5617583 tggatttattcatgttg--gagatttacccatttgtcgggacttggagaacttttatgttgatgtatttttgatatcatgacatgtatgcttcgaag-ta 5617487  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttat 143  Q
    | || |||||||||| ||||||||||| ||||||||||    
T  5617486 tttggtttatatccgttgcgactgttg-agatttttat 5617450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 15305542 - 15305426
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattt-tgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 133  Q
    |||| |||||| ||||||||| |||||||| ||| |||| | |||| | ||   |||||||||||||||||||||| | |||||||||||||| | ||||    
T  15305542 ccatatgtcggaatttggagattttatatggtgacgtatgtatgattttataaaatgtatattttggagatgtatgttatatatccgctgcgatttttga 15305443  T
Q  134 agatttttatatatgcat 151  Q
     || |||| |||||||||    
T  15305442 ggaatttt-tatatgcat 15305426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 14303049 - 14303109
Alignment:
Q  166 tgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||| ||||||| |||||||||||| ||||||| |||||| || ||||||||| ||||||    
T  14303049 tgttggagacgtaacgtctatttcttgaatatttgtattattcgcgtgttttatcgcttta 14303109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 18921267 - 18921318
Alignment:
Q  175 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||| ||||||||||||| |||||||||||||| || ||||||||| ||||||    
T  18921267 cgtggcgtctatttcttgaatatttatattattcgcgtgttttatcgcttta 18921318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 18366222 - 18366279
Alignment:
Q  168 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttt 225  Q
    ||||||||||  |||||||||||| ||||||| |||||| || ||||||||| |||||    
T  18366222 ttgaagacgtgacgtctatttcttgaatatttgtattattcgcgtgttttatcgcttt 18366279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 16370421 - 16370457
Alignment:
Q  40 tgtcgggatttggagaatttatatgatgatgtatttt 76  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  16370421 tgtcgggatttggagattttatatgatgatgtttttt 16370457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 16915752 - 16915634
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatgatt--tatatccgctgcgactgtt 131  Q
    |||||| |||||| ||||||||  | |||| ||||||| |||| || ||||||||||||| ||||| || | |||| ||  |||||||||||||||||||    
T  16915752 ccatttatcgggacttggagaacatttatgttgatgtattttttatatcatggcatgtatgttttgaag-tatatggtttatatatccgctgcgactgtt 16915654  T
Q  132 gaagatttttatatatgcat 151  Q
    ||   |||||||| ||||||    
T  16915653 gagtttttttatacatgcat 16915634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 13596060 - 13596284
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| | |||||    
T  13596060 ttattctggatttatttatgttgtggagatttgcccatttatcgggatttggagaatttttatgatgttgtattttgatctcatggcatgtagactttgg 13596159  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    ||||||||||| |||||||| ||| ||||||||| |||||||||||||| |   ||||||| || |||||| ||||||||||| ||||||| ||||||||    
T  13596160 agatgtatgatctatatccgatgcaactgttgaaaatttttatatatgcct-gttgtttggattttgttgatgacgtagcgtcgatttcttgaatattta 13596258  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    ||| || || ||||||||| ||||||    
T  13596259 tatgattcgcgtgttttatcgcttta 13596284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 219
Target Start/End: Original strand, 47470377 - 47470592
Alignment:
Q  5 tctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttat-atgatgatgtattttgatctcatggcatgtatattttggaga 103  Q
    ||||||||||||||||||||||||||||  |||||||||| |||||||||||||| | |||||||||||||||||| ||||| |||||||| ||| |||     
T  47470377 tctggatttatttatgttgtggagattttcccatttgtcgagatttggagaattttttatgatgatgtattttgatatcatgacatgtatacttttgagg 47470476  T
Q  104 tgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatat 203  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||     |||||||| |||||| ||||| ||||||||||||| |||||||||||    
T  47470477 tgtatggtttatatccgctgcgactgttgagaatttttatatatgcatgttgatttggtttttgttgatgacgtggcgtctatttcttgaatatttatat 47470576  T
Q  204 tatccgtgtgttttat 219  Q
    ||| || |||||||||    
T  47470577 tattcgcgtgttttat 47470592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 41919289 - 41919512
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||  ||| ||||||||||||||||| ||||||| ||| ||| ||||||||||    
T  41919289 ttattctggatttatttatgttgtggatatttgcccatttgtcgggattttaagattttatatgatgatgtatattgatcttatgacatctatattttgg 41919388  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    ||||||||||| ||||||| |||| ||| ||| ||| |||||||||||| |   ||||||| || |||||| |||||||| |||||||||| ||||||||    
T  41919389 agatgtatgatctatatccactgcaacttttg-agaattttatatatgcct-gttgtttggattttgttgatgacgtagcatctatttcttgaatattta 41919486  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||| ||||||    
T  41919487 tattattcgcgtgttttatcgcttta 41919512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 226
Target Start/End: Original strand, 19624085 - 19624298
Alignment:
Q  14 atttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattt 113  Q
    ||||||||| |||||||||  |||| |||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||    
T  19624085 atttatgttatggagattttaccatatgtcgggatttggagattttatatgatgatgtatattgatcttatgacatgtatattttggagatgtatgattt 19624184  T
Q  114 atatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtg 211  Q
    |||||| ||||||||||||| || ||||||||||||||   ||||||  || ||   ||||||||||||||||||||||| ||||||||| |||| ||||    
T  19624185 atatccactgcgactgttgatgaattttatatatgcat-gttgtttgaattttgatgtgaagacgtagcgtctatttcttgaatatttatgttattcgtg 19624283  T
Q  212 tgttttattgcttta 226  Q
    ||| |||| ||||||    
T  19624284 tgtattatcgcttta 19624298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 35 - 197
Target Start/End: Original strand, 5373190 - 5373351
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||     
T  5373190 ccatatgttgggatttggagaatttatatgatgatgtattttgatctcatgacatgtatattttggagaagtatgatttatatccgctgcgaccgttgag 5373289  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatat 197  Q
     ||||||||||||||||  ||||||||||| ||||||||||||||||||| ||| || |||||    
T  5373290 aatttttatatatgcatgtatgtttggttt-tgttgaagacgtagcgtctgttttttgaatat 5373351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 50224196 - 50224421
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| ||| |    
T  50224196 ttattctgaatttatttatgttgtggagatttgtccatttgtcgggatttggagaatttttatgttgatgtattttgatctcatggtatgtatacttttg 50224295  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg-tttggtttctgttgaagacgtagcgtctatttcttaaatattt 199  Q
    || |||||  |||||||||||||| ||||||||  |||| ||||||||| |  ||| ||| |||   ||||| ||||| ||||||||||||| |||||||    
T  50224296 aggtgtattgtttatatccgctgcaactgttgagaatttatatatatgc-ttgatgatttcgttatagttgacgacgtggcgtctatttcttgaatattt 50224394  T
Q  200 atattatccgtgtgttttattgcttta 226  Q
     |||||| || ||||||||| ||||||    
T  50224395 ttattattcgcgtgttttatcgcttta 50224421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 19557464 - 19557242
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||| || |||||||||||  |||||| | |||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| |    
T  19557464 ttattctggatttatttctgatgtggagatttacccattttttgggatttggagaatttttatgatgatgtattttgatctcatagcatgtatacttt-g 19557366  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || |||||| |||||||||||||| | ||||| ||| |||||| ||||| |   ||||| | || |||||| ||| | ||||||||||||| ||||||||    
T  19557365 aggtgtatggtttatatccgctgcaattgttg-agaattttatgtatgcct-gttgtttagattttgttgatgacatggcgtctatttcttgaatattta 19557268  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| | |||||||||| ||||||    
T  19557267 tattattcatgtgttttatcgcttta 19557242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 44 - 226
Target Start/End: Complemental strand, 14569497 - 14569315
Alignment:
Q  44 gggatttggagaatttatatgatgatgtattt--tgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattttt 141  Q
    |||||||||||| ||||||||||||| ||| |  ||  || ||| ||||||||||||||||||||||||||||||| |||||||||||||||  | ||||    
T  14569497 gggatttggagattttatatgatgatatatatattggacttatgacatgtatattttggagatgtatgatttatattcgctgcgactgttgagaaatttt 14569398  T
Q  142 atatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||||   ||||||  || |||||||||||||||||||||||||| |||||||||||||| ||||||| |||| ||||||    
T  14569397 atatatgcat-gttgtttgaatt-tgttgaagacgtagcgtctatttcttgaatatttatattattcgtgtgtattatcgcttta 14569315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 191
Target Start/End: Original strand, 12136362 - 12136513
Alignment:
Q  40 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 139  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| || ||    
T  12136362 tgtcggtacttggagaatttatatgatgatgtattttgatctcatgacatgtatactttggagatgtatgatttatatacattgcgactgttgaggactt 12136461  T
Q  140 ttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttctt 191  Q
    ||||||||||||     |||| ||| |  |||||||||||||||||||||||    
T  12136462 ttatatatgcatgttgttttgatttttaatgaagacgtagcgtctatttctt 12136513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15216281 - 15216379
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 99  Q
    |||||||||| |||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  15216281 ttattctggacttatttatgttgtggagactttcccaattgtcgggatttggagaatttatatgatgatgtattttaatctcatggcatgtatactttg 15216379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 10239481 - 10239705
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| ||||||||||| ||||||||||||||  ||| ||||||| ||||| ||||||| |||| ||||||||||||| ||||||||||||||| ||| |    
T  10239481 ttattttggatttatttgtgttgtggagatttacccaattgtcggaatttgaagaatttttatgttgatgtattttgacctcatggcatgtatacttttg 10239580  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    |  |||||| |||||||||||||| || ||  |  |||||||||||||| |   | ||||     |||||| || || |||||||||||||  |||||||    
T  10239581 aagtgtatggtttatatccgctgcaacggtatagaatttttatatatgc-ttgttatttgaacattgttgatgatgtggcgtctatttcttggatattta 10239679  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||||||||||    
T  10239680 tattattcgcgtgttttattgcttta 10239705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 12729428 - 12729316
Alignment:
Q  114 atatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtg 213  Q
    ||||||||||||||||||||  ||||||||||||||||     ||| |||| ||||||||||||||||||||||||||||||||||||||||| || |||    
T  12729428 atatccgctgcgactgttgagaatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtctatttcttaaatatttatattattcgcgtg 12729329  T
Q  214 ttttattgcttta 226  Q
    |||||| ||||||    
T  12729328 ttttatcgcttta 12729316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 17378244 - 17378427
Alignment:
Q  14 atttatgttgtggagatttggc-catttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 112  Q
    ||||||||||| ||||||| || ||| |||| ||| ||||||| ||||| |  |||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  17378244 atttatgttgttgagattttgctcatgtgtcaggacttggagattttatgt--tgatgtatattgatcttatgacatgtatattttggagatgtatgatt 17378341  T
Q  113 tatatccgctgcgactgttgaag-atttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatt 198  Q
    |||||||||||||||| |||| | |||||| |||||||||  ||||| | | | ||||||||||||| | | |||||||| ||||||    
T  17378342 tatatccgctgcgactattgatgaatttttgtatatgcat-gatgttcgatatttgttgaagacgtaacatttatttcttgaatatt 17378427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 13449102 - 13449277
Alignment:
Q  48 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 147  Q
    |||||||||||| ||||||||||||||  ||||||||| |||||||| ||| ||| |||||  |||||||||||||| ||||||||  ||||||||| ||    
T  13449102 tttggagaattt-tatgatgatgtattc-gatctcatgacatgtatacttttgaggtgtatagtttatatccgctgcaactgttgagaatttttatacat 13449199  T
Q  148 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||     ||||| || |||||| |||||  |||||||||||| |||| ||||||||| || ||||||||| ||||||    
T  13449200 gcatgttgttttggattttgttgatgacgtgacgtctatttcttgaata-ttatattattcgcgtgttttatcgcttta 13449277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 100 - 226
Target Start/End: Original strand, 54366187 - 54366313
Alignment:
Q  100 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 199  Q
    |||||||||||| |||||||||| ||||||||||  ||||||||||||||||     ||| |||| |||||||||||||||||||||||||| ||||| |    
T  54366187 gagatgtatgatctatatccgctacgactgttgagaatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtctatttcttgaatatat 54366286  T
Q  200 atattatccgtgtgttttattgcttta 226  Q
       |||| || ||||||||||||||||    
T  54366287 gctttattcgcgtgttttattgcttta 54366313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 5407243 - 5407088
Alignment:
Q  62 atgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg 161  Q
    |||||||||||||| |||||||||||||||||| |||| || |||||| |||||||||||||| ||||||||  || |||||| ||||||     |||||    
T  5407243 atgatgatgtattt-gatctcatggcatgtatactttg-aggtgtatggtttatatccgctgcaactgttgagaatatttatacatgcatgttgttttgg 5407146  T
Q  162 tttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttat 219  Q
     || | |||||||||| ||||||||| ||| |||||||||||||  || |||||||||    
T  5407145 attttattgaagacgtggcgtctattacttgaatatttatattactcgcgtgttttat 5407088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 19082979 - 19083130
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggc-catttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtata-tttt 98  Q
    |||| ||||||||||| ||||||| |||||||  | ||| |||||||||||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||    
T  19082979 ttatgctggatttatt-atgttgttgagattttacgcatatgtcgggatttggagattttatatggtgatgtatgttgatttcatgacatgtatattttt 19083077  T
Q  99 ggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
     |||||||||| | |||||| ||||||| | |||| || ||||||||| ||||    
T  19083078 tgagatgtatgttatatatctgctgcgatttttgaggaattttatataggcat 19083130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 18241235 - 18241452
Alignment:
Q  10 atttatttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtat 108  Q
    |||| |||||||| | || ||||  ||| |||||||||||| ||| |||||  |||||||||||| ||||  |||| ||||||||  ||| ||  | |||    
T  18241235 atttttttatgttttagatatttacccagttgtcgggattttggaaaattttgatgatgatgtatgttgacatcatagcatgtatgcttttgaattatat 18241334  T
Q  109 gatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatcc 208  Q
    |||||||||||||||| ||||||||  ||||||||| ||||||     ||| | || |||||| || |||||||||||||||| | |||||||||||| |    
T  18241335 gatttatatccgctgcaactgttgagaatttttatacatgcatgttgttttcgattttgttgatgatgtagcgtctatttcttgactatttatattattc 18241434  T
Q  209 gtgtgttttattgcttta 226  Q
      ||||||||| ||||||    
T  18241435 acgtgttttatcgcttta 18241452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 12732283 - 12732212
Alignment:
Q  47 atttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatc 118  Q
    ||||||||||||| | | |||||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  12732283 atttggagaatttttttaatgatgtattttgatctcatggcatgtagactttggagatgtatgatctatatc 12732212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 41258428 - 41258558
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||| ||||| |||||||||  ||||||||||||| |||||  | ||  ||||| |||||||| ||| ||||||||||||| ||||| || | |    
T  41258428 tggatttattcatgtt-tggagatttacccatttgtcgggacttgga--actttcatgattatgtattt-gatatcatggcatgtatgttttgaag-tat 41258522  T
Q  107 atgatttatatccgctgcgactgttgaagattttta 142  Q
    ||| |||||||||||||||||||||||  |||||||    
T  41258523 atggtttatatccgctgcgactgttgagaattttta 41258558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 24236974 - 24236925
Alignment:
Q  102 gatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    ||||||||| ||||||||||||||||||||||| | ||||||||||||||    
T  24236974 gatgtatgacttatatccgctgcgactgttgaataattttatatatgcat 24236925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24237041 - 24236980
Alignment:
Q  1 ttattctggatttatttatgttgtggaga-tttggccatttgtcgggatttggagaatttat 61  Q
    ||||||||| ||||||||||||||||||| |||  ||||||||||||||||||||| |||||    
T  24237041 ttattctgggtttatttatgttgtggagattttatccatttgtcgggatttggagactttat 24236980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 7966659 - 7966768
Alignment:
Q  24 tggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatgatttatatccgct 122  Q
    |||||||||  ||||||||||||| || ||||| || |||| ||||||| ||||||| |||||||||||||  ||| || |  |||| ||||||| ||||    
T  7966659 tggagatttacccatttgtcgggaattagagaacttttatgttgatgtatttttgatatcatggcatgtatgcttt-gaaacatatggtttatattcgct 7966757  T
Q  123 gcgactgttga 133  Q
    |||||||||||    
T  7966758 gcgactgttga 7966768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 226
Target Start/End: Complemental strand, 42706847 - 42706694
Alignment:
Q  74 tttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgca--tacatgtttggtttctgtt-g 170  Q
    |||||| ||||||||||||| ||||| || | |||||||||||||||||||||||| || |||||| |||  |||||  |  || || | |||  ||| |    
T  42706847 tttgatatcatggcatgtatgttttgaag-tatatgatttatatccgctgcgactgatg-agatttctatgcatgcatgttgattttggattttggttcg 42706750  T
Q  171 aagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    | ||||||||||||||||||| ||||| | |||||| || ||||||||| ||||||    
T  42706749 atgacgtagcgtctatttcttgaatatatttattattcgcgtgttttatcgcttta 42706694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 17194573 - 17194619
Alignment:
Q  87 catgtatattttggagatgtatgatttatatccgctgcgactgttga 133  Q
    |||||||| ||| | ||||||||||||||||||||| ||||||||||    
T  17194573 catgtatactttagtgatgtatgatttatatccgctacgactgttga 17194619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 226
Target Start/End: Original strand, 22595711 - 22595925
Alignment:
Q  12 ttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgat 111  Q
    ||||||||||| |||||||||  |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  22595711 ttatttatgttttggagatttacccatttgtcggggtttggagaatttatatgatgatgtattttgatcacatgacatgtatactttggagatgtatgat 22595810  T
Q  112 ttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtg 211  Q
    ||||||| ||||||||||||||  | ||||||||||||||     ||| |||| |||||||||||||||||||||||||| |||||||||||||| || |    
T  22595811 ttatatctgctgcgactgttgagaaattttatatatgcatgttgatttagtttttgttgaagacgtagcgtctatttcttgaatatttatattattcgcg 22595910  T
Q  212 tgttttattgcttta 226  Q
    |||||||| ||||||    
T  22595911 tgttttatcgcttta 22595925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 29162955 - 29163180
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||||||||||||||||||||||||||| |||| |||||| ||| |||||| |||||||||| |||||||||||||||||||||| |||||||| |||||    
T  29162955 ttattctggatttatttatgttgtggagttttgcccatttttcgagatttgaagaatttatacgatgatgtattttgatctcatgacatgtatactttgg 29163054  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatattt 199  Q
    ||||||||||| ||||||||||| |||||||||  ||||||||||||||||   ||||||| ||| |||||| || |||||||||||||||| |||||||    
T  29163055 agatgtatgatctatatccgctgtgactgttgagaatttttatatatgcat-gttgtttggatttttgttgatgatgtagcgtctatttcttgaatattt 29163153  T
Q  200 atattatccgtgtgttttattgcttta 226  Q
    || |||| |  ||||||||| ||||||    
T  29163154 atgttattcacgtgttttatcgcttta 29163180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 15006679 - 15006894
Alignment:
Q  10 atttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatg 109  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||| | |||  || ||||||    
T  15006679 atttatttatgttgtggagatttgcccatttgtcgggatttcgagaatttttatgatgttgtattttgatctcatggcatgtagacttttaaggtgtatg 15006778  T
Q  110 atttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccg 209  Q
     |||||||||||||| |||||| |  |||||||||||||| |   ||||||| || |||||| ||||||||||||||||||| |||||||||||||| |     
T  15006779 gtttatatccgctgcaactgttaagaatttttatatatgcct-gttgtttggattttgttgatgacgtagcgtctatttcttgaatatttatattattcc 15006877  T
Q  210 tgtgttttattgcttta 226  Q
     ||||||||| ||||||    
T  15006878 cgtgttttatcgcttta 15006894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 34965065 - 34964841
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||      
T  34965065 ttattctggatttatttatgttgtggagattttcccatttgtcgggatttagagaatttttatgatgatgtattttgatctcatggcatgtatacttttt 34964966  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || |||||| |||||||| ||||| | ||||||  ||||||| |||||| |   |||||||  | |||||| ||||  |||||||||| || ||||||||    
T  34964965 aggtgtatggtttatatctgctgcaaatgttgagaatttttaaatatgcct-gttgtttggactttgttgatgacgaggcgtctattttttgaatattta 34964867  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||| ||||||    
T  34964866 tattattcgcgtgttttatcgcttta 34964841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 22468148 - 22468296
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||| | ||| |    
T  22468148 ttattctggatttatttatgttgtggagatttgtccatttgtcgggatttggagaatttttatgatgttgtattttgatctcatgccatgtagactttag 22468247  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgc 149  Q
    ||||| ||||| |||||||||||| ||||||||  ||||||||||||||    
T  22468248 agatgcatgatctatatccgctgcaactgttgagaatttttatatatgc 22468296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 17858408 - 17858632
Alignment:
Q  2 tattctggatttatttatgttgtggagatttgg-ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||  |||||||||   |||||||||||| ||| |||| ||||| |   ||||||| ||||||| ||| ||||||||  ||||    
T  17858408 tattctggatttatttatgtcatggagatttttaccatttgtcgggtttttgagattttatttatggatgtatgttgatcttatgacatgtataccttgg 17858507  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
     ||||||||||||||||||||||||||||||||  ||||||||| ||||||   |||||| | | ||||| ||||||||| | |||||||| |||||||     
T  17858508 tgatgtatgatttatatccgctgcgactgttgagaatttttataaatgcat-gttgtttgatatttgttgcagacgtagcatgtatttcttgaatatttg 17858606  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||||||||||    
T  17858607 tattattcgcgtgttttattgcttta 17858632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 16131386 - 16131196
Alignment:
Q  5 tctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggaga 103  Q
    ||||||||| |||||||||||||||||| ||| || |||||||||||||||| ||||||||  ||||||| ||| |||  || ||||||||||| |||||    
T  16131386 tctggatttgtttatgttgtggagattttgcccatatgtcgggatttggagattttatatggcgatgtatattgttctt-tgacatgtatattt-ggaga 16131289  T
Q  104 tgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaata 196  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||||   |||||| |||   | ||||||||||||||||||||||| ||||    
T  16131288 tgtatgatttatatcccctgcgactgttgagaatttttatatatgcat-gttgtttgattttgatgtgaagacgtagcgtctatttcttgaata 16131196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 226
Target Start/End: Original strand, 12311051 - 12311268
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||| ||||| |||||||||   |||||||||||| ||||||||  | |||||| |||||||||||| |||||||||||||  |||| || | |    
T  12311051 tggatttattcatgtt-tggagatttacgcatttgtcgggacttggagaacatttatgattatgtattttgatatcatggcatgtatgctttgaag-tat 12311148  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    ||| |||||||||||||||||||||||  ||||||||| ||||||     ||||| || ||||||  |||||||||||||||||| ||||| | ||||||    
T  12311149 atggtttatatccgctgcgactgttgagaatttttatacatgcatgttgctttggattttgttgataacgtagcgtctatttcttgaatatatgtattat 12311248  T
Q  207 ccgtgtgttttattgcttta 226  Q
     || ||||||||| ||||||    
T  12311249 tcgcgtgttttatcgcttta 12311268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 23219065 - 23218920
Alignment:
Q  50 tggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgc 149  Q
    |||||| ||||||||||||||||| ||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||  |||||| |||||||    
T  23219065 tggagattttatatgatgatgtatattgatcttatgacatgtatattt-ggagacgtatgatttatatccgctgcgactgttgagaatttttctatatgc 23218967  T
Q  150 atacatgtttggtttctgttgaagacgtagcgtctatttcttaaata 196  Q
    ||     |||||||| | ||| |||||||||||||||||||| ||||    
T  23218966 atgttgatttggtttttattgtagacgtagcgtctatttcttgaata 23218920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 226
Target Start/End: Complemental strand, 19670621 - 19670445
Alignment:
Q  48 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 147  Q
    |||||||||||| ||||||||||||||  |||||| ||||||||||  ||||||| |||||| |||||||||||||| ||||||||  ||||||||||||    
T  19670621 tttggagaatttttatgatgatgtattc-gatctcttggcatgtatgctttggaggtgtatggtttatatccgctgcaactgttgagaatttttatatat 19670523  T
Q  148 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||     ||||| || |||||| ||  | ||||||||||||| |||| ||||||||| || ||||||||| ||||||    
T  19670522 gcatgttgttttggattttgttgatgatctggcgtctatttcttgaata-ttatattattcgcgtgttttatcgcttta 19670445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 16374088 - 16373896
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattt-tgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 133  Q
    |||| ||| |||||||||||| ||||| || ||| |||| | |||  | ||| ||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  16374088 ccatatgttgggatttggagattttatttggtgacgtatgtatgagtttatgacatatatattttggagatgtatgttttatatccgctgcgacttttga 16373989  T
Q  134 agatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
     || ||||||||||||||     |||||  | ||||||||||||  |||||| ||||| ||||||| |||||| || ||||||||| ||||||    
T  16373988 ggaattttatatatgcatgttattttggaatttgttgaagacgtcacgtctaattcttgaatatttgtattattcgcgtgttttatcgcttta 16373896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 29603702 - 29603484
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| |||  |||  || |||||| ||||| |||||||  | |  |  |||    
T  29603702 tggatttatt-atgttttggagaattgcccacttgtcgggatttggagaatttttatattgagatactttgatatcatgacatgtatgctcttaaattgt 29603604  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    ||| |||||||||||| ||||||||||  ||||||||| ||||||     ||||| || | |||| |||||  |||||||||||| ||||||||||||||    
T  29603603 atggtttatatccgctacgactgttgagaatttttatacatgcatgttgttttggatttttttgatgacgtgacgtctatttcttgaatatttatattat 29603504  T
Q  207 ccgtgtgttttattgcttta 226  Q
     ||||| |||||| ||||||    
T  29603503 tcgtgtattttatcgcttta 29603484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 97 - 226
Target Start/End: Original strand, 17375846 - 17375976
Alignment:
Q  97 ttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttg--aagacgtagcgtctatttcttaaa 194  Q
    |||| ||||||||| |||||| |||||||||||||||| | || |||||||| ||   ||||||||||  | ||  ||||||||||||||||||||||||    
T  17375846 ttggtgatgtatgacttatattcgctgcgactgttgaataattgtatatatgtatgt-tgtttggttttggatgtgaagacgtagcgtctatttcttaaa 17375944  T
Q  195 tatttatattatccgtgtgttttattgcttta 226  Q
    |||| ||||||| |||||||||||| ||||||    
T  17375945 tattaatattattcgtgtgttttatcgcttta 17375976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 19852333 - 19852209
Alignment:
Q  102 gatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttat 201  Q
    |||||||| |||||||||||||| | ||||||  ||||||||| || |||    |||||| || |||||| ||| | |||||||||||||||||||||||    
T  19852333 gatgtatggtttatatccgctgcaattgttgagaatttttatacattcatgttggtttggattttgttgatgacatggcgtctatttcttaaatatttat 19852234  T
Q  202 attatccgtgtgttttattgcttta 226  Q
    ||||| |||||||||| ||||||||    
T  19852233 attattcgtgtgtttttttgcttta 19852209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19852399 - 19852327
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtat 73  Q
    ||||| ||||||||||||| || |||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  19852399 ttattttggatttatttatattttggagatttacccatttgtcgggatttggagaatttttatgatgatgtat 19852327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 31469602 - 31469769
Alignment:
Q  48 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 147  Q
    |||||||||||| ||||||||||||||| ||||||||| ||| ||||  | | || ||||||||||||||||||||| || |||||  ||||||||| ||    
T  31469602 tttggagaattt-tatgatgatgtattt-gatctcatgacatctatacgtcg-aggtgtatgatttatatccgctgcaaccgttgagaatttttatacat 31469698  T
Q  148 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttat 219  Q
    ||||     ||||| || |||||| ||||| ||||||||||||| |||| ||||||||| || |||||||||    
T  31469699 gcatgttgttttggattttgttgatgacgtggcgtctatttcttgaata-ttatattattcgcgtgttttat 31469769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 21929484 - 21929381
Alignment:
Q  93 tattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttctta 192  Q
    |||||||||||||||| || |||||| |||||||||||| |  ||||||||||||||||     ||| |||| |||||||||||||| |||||||||| |    
T  21929484 tattttggagatgtattatatatatctgctgcgactgttaagaatttttatatatgcatgttgattttgtttttgttgaagacgtagggtctatttctca 21929385  T
Q  193 aata 196  Q
    ||||    
T  21929384 aata 21929381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 226
Target Start/End: Original strand, 17085669 - 17085813
Alignment:
Q  81 tcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgtt-gaagacgtag 179  Q
    ||||| |||||||| |||| || | |||||||| |||||||||||||||||| ||||||||||| ||||||     ||||| || |||| || ||||||     
T  17085669 tcatgacatgtataatttgaag-tatatgatttgtatccgctgcgactgttg-agatttttatacatgcatgttattttggattttgttggatgacgtaa 17085766  T
Q  180 cgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||||||||| ||||| | |||||| || ||||||||| ||||||    
T  17085767 cgtctatttcttgaatatatttattattcgcgtgttttatcgcttta 17085813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 22846244 - 22846032
Alignment:
Q  11 tttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatga 110  Q
    |||||| ||||| |||||||||  |||||||||| || || ||||| || ||||||  ||||||||| | ||||| |||||||  ||  ||  | ||||     
T  22846244 tttattcatgtt-tggagatttacccatttgtcgagactttgagaacttttatgatattgtattttgttatcatgacatgtatgctt--gatgtatatgg 22846148  T
Q  111 tttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatattatccg 209  Q
    |||||||||||||||||| |||| || ||||||| ||||||     ||||| ||| | |||| |||||||||| |||||||| |||||||||||||| ||    
T  22846147 tttatatccgctgcgactattga-gaattttatacatgcatgttgttttggattttttttgatgacgtagcgtttatttcttgaatatttatattattcg 22846049  T
Q  210 tgtgttttattgcttta 226  Q
     | ||||||| ||||||    
T  22846048 cgggttttatcgcttta 22846032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 25649379 - 25649171
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||| ||||||  |||||||  |||| |||||||| |||||||| || |||| |||||||||||||| | |||  ||||||  |||  || | |    
T  25649379 tggatttattcatgttg--gagatttacccatgtgtcgggacttggagaacttttatgttgatgtattttgatattatgatatgtatgctttaaag-tat 25649283  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    ||| ||| |||||||||||||| ||| ||||||||||  ||||||     |||||||| |||||| | | |  |||||||||||| ||||||||||||||    
T  25649282 atggtttgtatccgctgcgactattg-agatttttatgcatgcatggtgttttggtttttgttgatggcatgacgtctatttcttgaatatttatattat 25649184  T
Q  207 ccgtgtgttttat 219  Q
     || || ||||||    
T  25649183 tcgcgtattttat 25649171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15295531 - 15295586
Alignment:
Q  1 ttattctggatttatttatgttgtggaga-tttggccatttgtcgggatttggaga 55  Q
    ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  15295531 ttattctggatttatttatgttgtgaagattttacccatttgtcgggatttggaga 15295586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 14150540 - 14150487
Alignment:
Q  173 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||||||||||||| ||||| | |||||| |||||| ||||| ||||||    
T  14150540 gacgtagcgtctatttcttgaatatatttattattcgtgtgctttatcgcttta 14150487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 6092498 - 6092438
Alignment:
Q  166 tgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||| ||||||||||||||||||| |||||   |||||| || ||||||||| ||||||    
T  6092498 tgttgatgacgtagcgtctatttcttgaatataattattattcgcgtgttttatcgcttta 6092438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 33540279 - 33540476
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||| |||||||||  ||| ||||||||| |||||||| || |||| ||||||||||| ||| |||| ||||| ||  ||| ||  |     
T  33540279 tggatttattcatgtt-tggagatttacccaattgtcgggacttggagaactt-tatgttgatgtatttttgatatcatagcatgcatgcttttgaatta 33540376  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatatta 205  Q
    |||| |||||||||||||| || |||| ||| | ||||| |||||||    ||||| || |||||| ||| || | |||||||||| ||||| | |||||    
T  33540377 tatggtttatatccgctgcaaccgttg-agaatgttatacatgcatatcgttttggattttgttgatgacataacatctatttcttgaatatatgtatta 33540475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 21041915 - 21041701
Alignment:
Q  12 ttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgat 111  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||||||||||||||||    
T  21041915 ttatttatgttgtggagatttacccatttgtcgggatttggagaatttatatgatgatgtattttgatcacatgacaagtatactttggagatgtatgat 21041816  T
Q  112 ttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtg 211  Q
    ||||||||||||||||||||||  | ||||||||||||||     ||| |||| |||||||| |||||||||| |||||| |||||||||||||| || |    
T  21041815 ttatatccgctgcgactgttgagaaattttatatatgcatgttgatttagtttttgttgaaggcgtagcgtctgtttcttgaatatttatattattcgcg 21041716  T
Q  212 tgttttattgcttta 226  Q
    |||||||| ||||||    
T  21041715 tgttttatcgcttta 21041701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 40555508 - 40555284
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| | | |    
T  40555508 ttattttggatttatttatgttgtggagatttgcccatttgtcgggatttgaagaattt-tatgatgatgtattttgatctcatgacatgtatactattg 40555410  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || |||||| |||||||||||||| ||||||||  |||||||||||||| |     ||| |||| |||||| ||||| ||||||||||||| ||||||||    
T  40555409 aggtgtatggtttatatccgctgcaactgttgagaatttttatatatgcctgttgattttgtttttgttgatgacgtggcgtctatttcttgaatattta 40555310  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||| ||||||    
T  40555309 tattattcgcgtgttttatcgcttta 40555284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 41213699 - 41213902
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||  |||||||| ||| |    
T  41213699 ttattctggatttatttatgttatggagatttgcccatttgtcgggatttggagaatttttatgatgatgtattttaatctcattacatgtatacttttg 41213798  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || |||||| |||||||| ||||| ||||||||  ||||||||||||||||   || ||||||| |||||| ||||||||||||||||||| ||||||||    
T  41213799 aggtgtatggtttatatctgctgcaactgttgagaatttttatatatgcat-gttgattggttt-tgttgatgacgtagcgtctatttcttgaatattta 41213896  T
Q  201 tattat 206  Q
    ||||||    
T  41213897 tattat 41213902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 33384055 - 33383841
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||||||| |||||| | |||||    
T  33384055 ttattctggatttatttatgtttcggagatttgcccatttgtcggaatttggagaatttttatgatgttgtattttgatctcatgacatgtagactttgg 33383956  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    ||||||||||| |||||||||||| ||||||||  |||||||||||||| |   ||||||| || | |||| |||||| |||||||||||| ||||||||    
T  33383955 agatgtatgatctatatccgctgcaactgttgagaatttttatatatgc-ttgttgtttggattttcttgatgacgtaacgtctatttcttgaatattta 33383857  T
Q  201 tattatccgtgtgttt 216  Q
    |||||| || ||||||    
T  33383856 tattattcgcgtgttt 33383841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 5770236 - 5770460
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||| ||| |    
T  5770236 ttatcctggatttatttatgttgtggagatttacccatttgtcgggatttggagaatttttatgatgttgtattttgatctcatggcatatatacttttg 5770335  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || ||| || | |||||||||||| ||||||||  ||||||||||| ||||   |||||||||  |||||| ||||| ||||||||||||| ||||||||    
T  5770336 aggtgtctggtctatatccgctgcaactgttgagaatttttatataagcat-gttgtttggttcttgttgatgacgtggcgtctatttcttgaatattta 5770434  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    ||| || | |||||||||| ||||||    
T  5770435 tatgattcatgtgttttatcgcttta 5770460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 46 - 226
Target Start/End: Original strand, 78576 - 78756
Alignment:
Q  46 gatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatat 145  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||  ||||||| ||    
T  78576 gatttggagaatttacatgatgatgtattttgatctcatggcatgtatactttggagatgtatgatctatatccgctgccactgttgagaatttttacat 78675  T
Q  146 atgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||   ||||||| ||| |||||| ||| ||| ||||||||||| |||||||||||||| || ||||||||| ||||||    
T  78676 atgcat-gttgtttggatttttgttgatgacatagtgtctatttcttgaatatttatattattcgcgtgttttatcgcttta 78756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 218
Target Start/End: Original strand, 5472439 - 5472653
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||    
T  5472439 tggatttatttatgtt-tggagatttacccatttgtcgggatttggagaatttatatgatgatgtatttcgatatcatgacatgtatacttttgagatgt 5472537  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttctt--aaatatttata 202  Q
    ||||| | ||||||||||||||||||   ||||||||| ||||||     ||||| || ||  |||| |||||||||||||||||||  | |||||||||    
T  5472538 atgatctttatccgctgcgactgttgggaatttttatacatgcatgttgttttggattttgaattgatgacgtagcgtctatttcttgaatatatttata 5472637  T
Q  203 ttatccgtgtgtttta 218  Q
    |||| || ||||||||    
T  5472638 ttattcgcgtgtttta 5472653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 9293461 - 9293641
Alignment:
Q  24 tggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgct 122  Q
    |||||||||  ||| |||||||||||| |||||||||  |||||| ||||||||||| ||||| |||||||||||| ||  | |||||||||||||||||    
T  9293461 tggagatttatccaattgtcgggattttggagaattttgatgatgttgtattttgatatcatgacatgtatatttttgaattatatgatttatatccgct 9293560  T
Q  123 gcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatat 203  Q
    |||||||||||  ||||||||||||||||     ||| |||| |||||| ||| ||||||||||||||| |||||||||||    
T  9293561 gcgactgttgagaatttttatatatgcatgttgatttagtttttgttgatgacatagcgtctatttcttgaatatttatat 9293641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 219
Target Start/End: Complemental strand, 46143898 - 46143694
Alignment:
Q  16 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 114  Q
    ||||||| |||||||||  ||| |||||||||||| |||||||||  |||||||||||||||||| ||||| |||||||| ||| ||| |||||  ||||    
T  46143898 ttatgttttggagatttacccaattgtcgggattttggagaattttgatgatgatgtattttgatatcatgacatgtatacttttgaggtgtatcgttta 46143799  T
Q  115 tatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgt 214  Q
    |||||||||||||||||||  ||||||||| ||| ||     ||||| || |||||| |||||  |||||||||||| |||||||||||||| || ||||    
T  46143798 tatccgctgcgactgttgagaatttttatacatggatgttgttttggattttgttgatgacgtgacgtctatttcttgaatatttatattattcgcgtgt 46143699  T
Q  215 tttat 219  Q
    |||||    
T  46143698 tttat 46143694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 226
Target Start/End: Original strand, 50001991 - 50002210
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||||||||  |||||||||  ||| ||||||||||||||||||||| |||  |||  |||||| || ||||||||||||||  || |||||||    
T  50001991 tggatttatttatgtgctggagatttacccacttgtcgggatttggagaatttttatattgagatatttttatatcatggcatgtatacctttgagatgt 50002090  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    ||||| | ||||||||||||||||||   ||||||||| ||||||     ||||| || |||||| |||||  || ||||||||| ||||||||||||||    
T  50002091 atgatatttatccgctgcgactgttgggaatttttatacatgcatgttgttttggattttgttgatgacgtgacgactatttcttgaatatttatattat 50002190  T
Q  207 ccgtgtgttttattgcttta 226  Q
     || ||||||||| ||||||    
T  50002191 tcgcgtgttttatcgcttta 50002210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 29217275 - 29217066
Alignment:
Q  16 ttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttat 115  Q
    ||||||| |||||||||  ||| ||||||| ||||||||||||| ||||||| ||||||||||| || | ||||||||  ||| ||  | |||| |||||    
T  29217275 ttatgttttggagatttacccaattgtcggaatttggagaatttttatgatgttgtattttgatttcttagcatgtatgcttttgaattatatggtttat 29217176  T
Q  116 atccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgtt 215  Q
    ||||||||| |||||||| || ||||||| ||||||     |||||||| |||||| |||||||||| |||||||| |||||||||||||| || |||||    
T  29217175 atccgctgcaactgttga-gaattttatacatgcatgttgttttggtttttgttgatgacgtagcgtatatttcttgaatatttatattattcgcgtgtt 29217077  T
Q  216 ttattgcttta 226  Q
    |||| ||||||    
T  29217076 ttatcgcttta 29217066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 20191845 - 20191672
Alignment:
Q  39 ttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatt 138  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||              ||||||||||||||||| |||||||||||||||  |||    
T  20191845 ttgtcgggacttggagaacttatatgatgatgtattttgatctcatgg--------------agatgtatgatttatattcgctgcgactgttgagaatt 20191760  T
Q  139 tttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||||||||||     |||||||| | ||| |||||||||||||||||||| ||||  | | |||| |||||||||||| ||||||    
T  20191759 tttatatatgcatgttgatttggtttttattgtagacgtagcgtctatttcttgaataaatgttttattcgtgtgttttatcgcttta 20191672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 40438371 - 40438463
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtat 93  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||    
T  40438371 ttattctggttttatttatgttgcggagattagcccatttgtcgggatttgaagaattgttatgatgttgtattttgatctcatggcatgtat 40438463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 12891447 - 12891583
Alignment:
Q  82 catggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcg 181  Q
    |||| ||||||||||||||||||||||||| |||||||| ||| | |||||||  ||||||||||||  |   ||||||| || |||||| |||||||||    
T  12891447 catgacatgtatattttggagatgtatgatctatatccgttgcaattgttgaaattttttatatatgtct-gttgtttggattatgttgatgacgtagcg 12891545  T
Q  182 tctatttcttaaatatttatattatccgtgtgttttat 219  Q
    |||||||||| |||||||||||||| ||  ||||||||    
T  12891546 tctatttcttgaatatttatattattcgcatgttttat 12891583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 21193261 - 21193070
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    ||||||||||||| || ||||| || |||||| |||||||||||| |||| ||||||||  |||| || | |||| |||||||||||||||||||||||     
T  21193261 ccatttgtcgggacttagagaacttttatgattatgtattttgatatcatagcatgtatgctttgaag-tatatggtttatatccgctgcgactgttgag 21193163  T
Q  135 gatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
     ||||||||| ||||||     ||||  || ||| ||| ||||||||||||||||||| ||||| | |||||| || ||||||||| ||||||    
T  21193162 aatttttatacatgcatgttgttttgaattttgtatgatgacgtagcgtctatttcttgaatatatgtattattcgcgtgttttatcgcttta 21193070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 226
Target Start/End: Complemental strand, 18164294 - 18164120
Alignment:
Q  48 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 147  Q
    |||||||||||| ||||||||||||||  ||| ||||| |||||||| |||| || ||||||||||||||||||||| ||||||||  ||||||||| ||    
T  18164294 tttggagaattt-tatgatgatgtattc-gatatcatgacatgtatactttg-aggtgtatgatttatatccgctgcaactgttgagaatttttatacat 18164198  T
Q  148 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||     ||||  || ||||||||| |  ||||||||||||| |||| ||||||||| || ||||||||||||||||    
T  18164197 gcatgttgttttgcattttgttgaagatgcggcgtctatttcttgaata-ttatattattcgcgtgttttattgcttta 18164120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20820572 - 20820455
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatt-tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 99  Q
    ||||||| ||||| |||||||||| ||||||| |||| | ||||||||||| |||| ||||||||||||||||| ||||||| ||| | ||||||||||     
T  20820572 ttattctagatttgtttatgttgttgagattttgccaatatgtcgggatttagagattttatatgatgatgtatattgatcttatgacttgtatatttta 20820473  T
Q  100 gagatgtatgatttatat 117  Q
    ||||  ||||||||||||    
T  20820472 gagaattatgatttatat 20820455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 25092955 - 25092904
Alignment:
Q  39 ttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatg 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25092955 ttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatg 25092904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 25091095 - 25090983
Alignment:
Q  114 atatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtg 213  Q
    ||||||||||||||||||||  ||||||||||||||||     ||| ||||  ||||||||||||||||||||||||| ||||  ||| |||| || |||    
T  25091095 atatccgctgcgactgttgagaatttttatatatgcatgttgatttagttttcgttgaagacgtagcgtctatttcttgaataaatattttattcgcgtg 25090996  T
Q  214 ttttattgcttta 226  Q
    |||||| ||||||    
T  25090995 ttttatcgcttta 25090983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 22837680 - 22837796
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 133  Q
    ||||||||||||| |||||||| ||  ||||| ||||||||| ||| ||||||||||||| ||| | ||   | || ||||||||||||||||||||||     
T  22837680 ccatttgtcgggacttggagaactttcatgattatgtatttttgatatcatggcatgtatgtttcgaagtattttggtttatatccgctgcgactgttg- 22837778  T
Q  134 agatttttatatatgcat 151  Q
    ||||||||||| ||||||    
T  22837779 agatttttatacatgcat 22837796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 52397787 - 52397569
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||| |||||||||  ||| |||||||||||| |||||||||  |||||||||||| ||||  ||||  |||||||  ||| ||  |     
T  52397787 tggatttatt-atgttttggagatttacccagttgtcgggattttggagaattttgatgatgatgtatgttgacgtcataacatgtatgcttttgaatta 52397689  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatatta 205  Q
    |||| |||||||| |||||  |||| ||  ||||||||| ||||||    |||||  || |||||| | |||||||||||||| || |||||||| ||||    
T  52397688 tatggtttatatctgctgcatctgtcgagaatttttatacatgcat-gtcgtttgaattttgttgatggcgtagcgtctatttattgaatatttagatta 52397590  T
Q  206 tccgtgtgttttattgcttta 226  Q
    | || ||||||||| ||||||    
T  52397589 ttcgcgtgttttatcgcttta 52397569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 37236029 - 37236214
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatg--atttatatccgctgcgactgtt 131  Q
    ||||||||||||| ||||||||  | |||| ||||||| ||||||| ||||| ||||||| ||||| || | ||||   | |||||||||||||||||||    
T  37236029 ccatttgtcgggacttggagaacatttatgttgatgtatttttgatatcatgacatgtatgttttgaag-tatatggcttatatatccgctgcgactgtt 37236127  T
Q  132 gaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgtttta 218  Q
    | ||||||||||| ||||||     ||| | || ||| ||| ||||||||||||||||||| ||||| | |||||| || ||||||||    
T  37236128 g-agatttttatacatgcatgttgttttagattttgtatgatgacgtagcgtctatttcttgaatatatgtattattcgcgtgtttta 37236214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 22148521 - 22148663
Alignment:
Q  81 tcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat-acatgtttggtttctgttgaagacgtag 179  Q
    |||||||||||||  |||| || | |||||||| |||||||||||||||||| ||||||||||| ||||||   || || | |||    ||| |||||||    
T  22148521 tcatggcatgtatgatttgaagtt-tatgatttgtatccgctgcgactgttg-agatttttatacatgcatgttattttagattttatatgatgacgtag 22148618  T
Q  180 cgtctatttcttaaatatttatattatccgtgtgttttattgctt 224  Q
    |||||||||||| ||||| | |||||| || ||||||||| ||||    
T  22148619 cgtctatttcttgaatatatttattattcgcgtgttttatcgctt 22148663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 17607027 - 17606929
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtatt-ttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 133  Q
    ||||||||||||| |||||||| ||  ||| ||||||||| ||||| |||||||||||||  |||| || | | || ||||||| |||||||||||||||    
T  17607027 ccatttgtcgggacttggagaactttcatgttgatgtattcttgatatcatggcatgtatgctttgaag-tatttggtttatattcgctgcgactgttga 17606929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 40438509 - 40438570
Alignment:
Q  155 tgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttt 216  Q
    ||||||| || |||||| |||||  |||||||||||| |||||||||||||| || ||||||    
T  40438509 tgtttggattttgttgatgacgtgacgtctatttcttgaatatttatattattcgcgtgttt 40438570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 6092585 - 6092362
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| | | |||||| | |||||    
T  6092585 ttattctggatttatttatgttgcggagatttgcccatttgtcgggatttggagaatttttatgatgttgtattttgatcttacgacatgtagactttgg 6092486  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    ||||||||||| |||||||||||| ||||||| ||| |||||||||||| |   ||||||| || |||||| ||||||||||||||||||| ||||||||    
T  6092485 agatgtatgatctatatccgctgcaactgttg-agaattttatatatgc-ttgttgtttggattttgttgatgacgtagcgtctatttcttgaatattta 6092388  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||| ||||||    
T  6092387 tattattcgcgtgttttatcgcttta 6092362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 24272182 - 24271957
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| |||||||||||||||| | |||||||  ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||| ||| |    
T  24272182 ttattttggatttatttatgttttagagatttacccatttgtcgggatttggagaatttttatgatgatgtattttgatatcatgacatatatactttag 24272083  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || |||||||||||||||| |||||||||||||  ||||||||| ||||||     ||||| ||  ||||| ||||| ||||||||||||| ||||||||    
T  24272082 aggtgtatgatttatatccactgcgactgttgagaatttttatacatgcatgttattttggatttcgttgatgacgtggcgtctatttcttgaatattta 24271983  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
     ||||| || ||||||||| ||||||    
T  24271982 cattattcgcgtgttttatcgcttta 24271957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 7 - 226
Target Start/End: Original strand, 30995029 - 30995245
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||||||||   ||||||||  ||| |||||||||||| |||||||| || | ||||||||||||||||| || |||||||| ||| ||| |||    
T  30995029 tggatttatttatgt---ggagattttcccaattgtcgggatttagagaatttttaggttgatgtattttgatctc-tgacatgtatacttttgaggtgt 30995124  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatatt 204  Q
    ||| |||||||||||||||||||||||  |||||||||||||  |   | ||||| || ||  |||| ||||| ||||||||||||| ||||||||||||    
T  30995125 atggtttatatccgctgcgactgttgagaatttttatatatgtct-gttatttggattttgaattgatgacgtggcgtctatttcttgaatatttatatt 30995223  T
Q  205 atccgtgtgttttattgcttta 226  Q
    || |||||||||||| ||||||    
T  30995224 attcgtgtgttttatcgcttta 30995245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 18533458 - 18533345
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||     
T  18533458 ccatatgttgggacttgaagaatttatatgatgatgtattttgatctcatgacatgtatactttggagatgtatgttttatatccgctgcgactgttgag 18533359  T
Q  135 gatttttatatatg 148  Q
     |||||| ||||||    
T  18533358 aatttttttatatg 18533345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 19643981 - 19643889
Alignment:
Q  41 gtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 133  Q
    |||| ||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19643981 gtcgagatttagagaatttatatgatgatgtatattgatcttatgacatgtatattttggagatgtatgatttatatccgctgcgactgttga 19643889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 25132352 - 25132254
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 99  Q
    ||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||    
T  25132352 ttattttggatttatttatattgtggagatttgcccatttgacgggatttggagaatttttatgatgttgtattttgatctcatggcatgtatactttg 25132254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 226
Target Start/End: Complemental strand, 43640446 - 43640259
Alignment:
Q  38 tttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagat 137  Q
    ||||| |||| || |||||||| |||||| |||||||||||| |||||||||||||  |||| || | |||| |||||||||||||||||||||| | ||    
T  43640446 tttgtagggacttagagaatttttatgattatgtattttgatatcatggcatgtatgctttgaag-tatatggtttatatccgctgcgactgttggaaat 43640348  T
Q  138 ttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||| ||||||     ||||| || |||||| |||||| |||||||||||| |||||||||  ||| || ||||||||| ||||||    
T  43640347 ttttatacatgcatgttgttttgggttttgttgatgacgtatcgtctatttcttgaatatttatgctattcgcgtgttttatcgcttta 43640259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 24839493 - 24839346
Alignment:
Q  68 atgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg 167  Q
    |||||| ||||||| ||| |||||||||||||||||  ||||| ||||||| ||||||||||||||  ||||||||||||||||   ||||||  || ||    
T  24839493 atgtatgttgatcttatgacatgtatattttggagacatatgaattatatctgctgcgactgttgagaatttttatatatgcat-gttgtttgaattttg 24839395  T
Q  168 --ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgt 214  Q
       ||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  24839394 atatgaagacgtagcgtctatttcttgaatttttatattatccgcgtgt 24839346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 20271066 - 20270922
Alignment:
Q  2 tattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||| ||||||| |||||||| ||||||||| ||| || ||||||| |||||||| ||||| |  |||| ||||| ||  | ||| ||||||||||| ||    
T  20271066 tattatggatttgtttatgttatggagattttgcccatatgtcgggttttggagattttatgtattgatatatttggagtt-atgacatgtatattt-gg 20270969  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatat 147  Q
    |||||||||||||||||| ||||||||| ||||  ||||||||||||    
T  20270968 agatgtatgatttatatctgctgcgactattgagaatttttatatat 20270922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 25593267 - 25593213
Alignment:
Q  40 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtata 94  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  25593267 tgtcgggacttggagaatttatgtgatgatgtattttgatctcatggcatgtata 25593213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 226
Target Start/End: Original strand, 19435982 - 19436184
Alignment:
Q  24 tggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttg-atctcatggcatgtatattttggagatgtatgatttatatccgct 122  Q
    |||||||||  |||||| |||||| ||||||||  | |||| |||||||||||  || ||||||||||||| ||||| || | |||  ||||||||||||    
T  19435982 tggagatttacccatttctcgggacttggagaacatttatgttgatgtattttttatatcatggcatgtatgttttgaag-tatattgtttatatccgct 19436080  T
Q  123 gcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaa-gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattg 221  Q
    |||||||||| ||||||||||| ||||||     ||||| || |||| || || ||||| |||||||||| ||||| | |||||| || ||||||||| |    
T  19436081 gcgactgttg-agatttttatacatgcatgttgttttggattttgtttaatgatgtagcttctatttcttgaatatatgtattattcgcgtgttttatcg 19436179  T
Q  222 cttta 226  Q
    |||||    
T  19436180 cttta 19436184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 19648211 - 19647994
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatt-ttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  || ||||  |||||| |||||| ||||||| ||| |||| ||||||||| ||||| ||||||||||||||||||| || ||    
T  19648211 tggatttattcatgttg--gatatttacccatttatcgggacttggagagttt-tatgttgatgtattattgatatcatggcatgtatattttgaag-tg 19648116  T
Q  106 tatgatttat-atccgctgcgactgttgaagatttttatatatgcatacatgtttgg-tttctgt-tgaagacgtagcgtctatttcttaaatatttata 202  Q
    |||| ||||| ||||||||||||||||| ||| | ||||||||||||   |||||||  || ||| ||| || |||||||||||||||| ||||||  ||    
T  19648115 tatggtttataatccgctgcgactgttg-aga-tattatatatgcatgattgtttggaattttgtatgatgatgtagcgtctatttcttgaatattatta 19648018  T
Q  203 ttatccgtgtgttttattgcttta 226  Q
    |||| ||  |||||||| ||||||    
T  19648017 ttattcgcttgttttatcgcttta 19647994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 32738593 - 32738460
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  ||| |||  ||||||||||||| || ||||| || |||| | ||||||||| ||| ||||||||||||| |||||||| |     
T  32738593 tggatttattcatgttg--gagttttacccatttgtcgggactttgagaacttttatgtttatgtatttttgatatcatggcatgtatgttttggag-ta 32738497  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttat 143  Q
    |||| ||||||| |||||||||||||| ||||||||||    
T  32738496 tatggtttatattcgctgcgactgttg-agatttttat 32738460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 226
Target Start/End: Original strand, 22137922 - 22138075
Alignment:
Q  73 ttttgatctcatggcatgtatattttggagatgtatgatttat-atccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tg 170  Q
    ||||||| |||||||||||||||||| ||  | |||||||||| ||| ||||||||||||| ||||||||||| ||||||     |||||  | ||| ||    
T  22137922 ttttgatatcatggcatgtatatttt-gaattatatgatttataatctgctgcgactgttg-agatttttatacatgcatgttgttttggaatttgtgtg 22138019  T
Q  171 aagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    | ||||||||||||||||||| ||||| | |||||| || |||||| || ||||||    
T  22138020 atgacgtagcgtctatttcttgaatatatgtattattcgcgtgtttaatcgcttta 22138075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 24296642 - 24296700
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtat 93  Q
    ||||||||||||| |||||||| ||  ||||| |||||||||||| |||||||||||||    
T  24296642 ccatttgtcgggacttggagaactttcatgattatgtattttgatatcatggcatgtat 24296700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 24381738 - 24381680
Alignment:
Q  168 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||||  |||||||||||| ||||||| |||||| || ||||||||| ||||||    
T  24381738 ttgaagacgtgacgtctatttcttgaatatttgtattattcgcgtgttttatcgcttta 24381680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 125
Target Start/End: Original strand, 45620576 - 45620604
Alignment:
Q  97 ttggagatgtatgatttatatccgctgcg 125  Q
    |||||||||||||||||||||||||||||    
T  45620576 ttggagatgtatgatttatatccgctgcg 45620604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 7 - 226
Target Start/End: Original strand, 23236455 - 23236673
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| ||| |||    
T  23236455 tggatttatttatgttgtggagatttacccatttgtcgggatttggagaatttttatgatgttgtattttgatctcatggcatgtatacttttgaggtgt 23236554  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    |||||||||||||||||| ||||||||  |||||||||||||  |   ||||||| || |||||| |||||  |||||||||||| ||||||||||||||    
T  23236555 atgatttatatccgctgcaactgttgagaatttttatatatgtct-gttgtttggattttgttgatgacgtgacgtctatttcttgaatatttatattat 23236653  T
Q  207 ccgtgtgttttattgcttta 226  Q
      | ||||||||| ||||||    
T  23236654 ttgcgtgttttatcgcttta 23236673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 20456636 - 20456780
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  20456636 ccatatgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgtgactgttgag 20456735  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagc 180  Q
     ||||||||||||||||  ||||||||||| |||||||||||||||    
T  20456736 aatttttatatatgcatgtatgtttggttt-tgttgaagacgtagc 20456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 14345743 - 14345926
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||     
T  14345743 ccatatgtcgggacttgaagaatttatatgatgatgtattttgatctcatgacatgtatactttggagatgtatgatttatatctgctgtgactgttgag 14345842  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttat 219  Q
     || ||||||||||  ||  || |||| || |||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  14345843 aatatttatatatgtcta-ttggttggattttgttgaagacgtagcgtctatttcttgaatatttatattattcgtgtgttttat 14345926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 19872038 - 19871843
Alignment:
Q  9 gatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtat 108  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||| | |||||||||||||    
T  19872038 gatttatttatgttgtggagatttgctcatttgtcgggatttggagaattt-tatgatgttgtattttgatctcatgacatgtagactttggagatgtat 19871940  T
Q  109 gatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
    ||| | |||| ||||| ||| ||||  |||||||||||||| |   ||||||| || |||||| ||||||||||||||||||| ||||||||||||||    
T  19871939 gatctgtatctgctgcaactattgagaatttttatatatgcct-gttgtttggattttgttgatgacgtagcgtctatttcttgaatatttatattat 19871843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 11963729 - 11963579
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||| |||||||| |    
T  11963729 ttattctagatttatttatattgtggagatttgcccatttgtcaggatttggagattttatatgatgatgtatattgatcttatgacatttatatttttg 11963630  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  11963629 agatgtatgatttatatccgctgcgactattgagaatttttatatatgcat 11963579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 41 - 226
Target Start/End: Original strand, 16837814 - 16837998
Alignment:
Q  41 gtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttt 140  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||||||||| | |||||||||||| |||||||||||||||||||| ||||  |||||    
T  16837814 gtcgggatttggagaatttatatgatgttgtatttttatcttatggcatgtagactttggagatgtaagatttatatccgctgcgactattgagaatttt 16837913  T
Q  141 tatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||||||||     ||| |||| |||||||||| ||||||||||||||| |||||||||||||| || ||||||||| ||||||    
T  16837914 tatatatgcatgttaattttgttt-tgttgaagacctagcgtctatttcttgaatatttatattattcgcgtgttttatcgcttta 16837998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 29912175 - 29911956
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||||||||  |||||||||| ||| ||||||||||||||||||||| |||  |||  | ||||||| |||||||||||||| ||| |||||||    
T  29912175 tggatttatttatgtgttggagatttgcccacttgtcgggatttggagaatttttatattgagattttttgatatcatggcatgtatacttttgagatgt 29912076  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgttt-ggtttctgttgaagacgtagcgtctatttcttaaatatttatatta 205  Q
    ||||||| |||| ||||||||||||| | ||||||||| ||||||   ||||| || || |||||| || ||  |||||||||||| |||||||||||||    
T  29912075 atgatttttatctgctgcgactgttggaaatttttatacatgcat-gttgtttcggattttgttgatgatgtgacgtctatttcttgaatatttatatta 29911977  T
Q  206 tccgtgtgttttattgcttta 226  Q
    | |||||||||||| ||||||    
T  29911976 ttcgtgtgttttatcgcttta 29911956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 3420871 - 3421096
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| |||||||||||||||| |||||||||   ||||||||||||| |||| ||  | ||| ||||||||||||||| ||||| |||||||| ||| |    
T  3420871 ttattgtggatttatttatgttttggagattttctcatttgtcgggatgtggaaaaaatttataatgatgtattttgatatcatgacatgtatacttttg 3420970  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || ||||||||||||||| ||||||| ||||||  ||||||||| ||||||     ||||| || |||||| |||||  |||||||||||| ||||||||    
T  3420971 aggtgtatgatttatatctgctgcgattgttgagaatttttatacatgcatcttattttggattttgttgatgacgtgacgtctatttcttgaatattta 3421070  T
Q  201 tattatccgtgtgttttattgcttta 226  Q
    |||||| || ||||||||| ||||||    
T  3421071 tattattcgcgtgttttatcgcttta 3421096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 5623457 - 5623662
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| |||||||||||||||| |||||||||  ||||||||||||||||||||||||| |||||||||||||| |||| ||||| |||||||| | | |    
T  5623457 ttattgtggatttatttatgttttggagatttacccatttgtcgggatttggagaatttttatgatgatgtattgtgatatcatgacatgtatactattg 5623556  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    |  ||||||||||||||||||||| ||||||||  ||||||||| || |||     ||||| || |||||| |||||  |||||||||||| |||| |||    
T  5623557 atgtgtatgatttatatccgctgcaactgttgagaatttttatacatacatgttattttggattttgttgatgacgtgacgtctatttcttgaataatta 5623656  T
Q  201 tattat 206  Q
    ||||||    
T  5623657 tattat 5623662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 226
Target Start/End: Original strand, 11765764 - 11765975
Alignment:
Q  14 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 112  Q
    ||||||||||| ||||||| ||| || |||||| |||| |||| ||||||||||||||||||||| |||  || ||||||||||||||||||||||||||    
T  11765764 atttatgttgttgagattttgcccatatgtcgg-attttgagattttatatgatgatgtattttgttcttttgtcatgtatattttggagatgtatgatt 11765862  T
Q  113 tatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgt 212  Q
    |||||||||||||||| ||||  | ||||||||||||||   |||| |  || ||||||||||||| |||||||||||| ||||  |   |||| |||||    
T  11765863 tatatccgctgcgactattgagaaattttatatatgcat-gttgttggtgttttgttgaagacgtaacgtctatttcttgaataaatgatttattcgtgt 11765961  T
Q  213 gttttattgcttta 226  Q
    ||||||| ||||||    
T  11765962 gttttatcgcttta 11765975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 26561826 - 26562030
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| || ||||||||||||| |||||| ||  |||||||||||||||||||||| || |||||| ||| |||||||| ||||||| |||||| ||| |    
T  26561826 ttattgtgaatttatttatgttttggagaattacccatttgtcgggatttggagaaattttatgataatgaattttgatatcatggcttgtatacttttg 26561925  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    ||  |||||||||||||||||||||||||||| ||| ||||||| ||||||     |||||||| |||||| ||| |   ||||||||||| ||||||||    
T  26561926 aggagtatgatttatatccgctgcgactgttg-agaattttatacatgcatgttgatttggtttttgttgaggacatgatgtctatttcttgaatattta 26562024  T
Q  201 tattat 206  Q
    ||||||    
T  26562025 tattat 26562030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 40 - 196
Target Start/End: Complemental strand, 23412081 - 23411926
Alignment:
Q  40 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 139  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || ||||||| ||||  ||||    
T  23412081 tgtcaggatttggagaatttatatgatgatgtattt-gatctcatggcatgtatactttggagatgtatgatttatattcggtgcgactattgagaattt 23411983  T
Q  140 ttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaata 196  Q
    ||||| ||||||     |||||||| | ||| ||||||| |||||||||||| ||||    
T  23411982 ttatacatgcatgttgatttggtttttattgtagacgtaacgtctatttcttgaata 23411926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 206
Target Start/End: Complemental strand, 37985940 - 37985770
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||||||||||||||| ||||||||  ||||||| ||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||||||     
T  37985940 ccatatgtcgggatttggagattttatatgtcgatgtatgttgatcttatgacatgtatattttggagatgtatgatttatatctgatgcgactgttgag 37985841  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 206  Q
     |  |||||||||||||   |||||    ||| ||||||||| |||||||||||||| ||||||| ||||||    
T  37985840 aaaatttatatatgcat-gttgtttaaaatctattgaagacgcagcgtctatttcttgaatatttgtattat 37985770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 24082234 - 24082024
Alignment:
Q  16 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 114  Q
    ||||||| |||||||||  ||| |||||||||||| |||||||||  |||||||||||||||||| ||||| |||||||| ||| ||  | |||| ||||    
T  24082234 ttatgttttggagatttacccagttgtcgggattttggagaattttgatgatgatgtattttgatatcatgtcatgtatacttttgaattatatggttta 24082135  T
Q  115 tatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgt 214  Q
    |||||||||| ||||||||  ||||||||| ||||||     ||||| || |||||| ||||| ||||||||||||| |||| ||||||||| || ||||    
T  24082134 tatccgctgcaactgttgagaatttttatacatgcatgttgttttggattttgttgatgacgtggcgtctatttcttgaata-ttatattattcgcgtgt 24082036  T
Q  215 tttattgcttta 226  Q
    | ||| ||||||    
T  24082035 tgtatcgcttta 24082024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 226
Target Start/End: Original strand, 24227987 - 24228204
Alignment:
Q  7 tggatttatttatgttgtggagatttggccattt-gtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  |||||||  |||||| ||||||| ||||||||||| |||||  |||||||||||| |||||||||||||  |||| || |     
T  24227987 tggatttattcatgttg--gagatttatccattttgtcgggacttggagaatttttatgactatgtattttgatatcatggcatgtatgctttgaag-ta 24228083  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatatta 205  Q
    |||| ||||||||||||||||||||||   ||||||||| ||||||     ||||| || |||||| ||| ||||||||||||||| ||||| | |||||    
T  24228084 tatggtttatatccgctgcgactgttgggaatttttatacatgcatgttgttttggattttgttgatgacatagcgtctatttcttgaatatatgtatta 24228183  T
Q  206 tccgtgtgttttattgcttta 226  Q
    | ||  |||||||| ||||||    
T  24228184 ttcgcatgttttatcgcttta 24228204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 224
Target Start/End: Original strand, 37483115 - 37483253
Alignment:
Q  87 catgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtct 184  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||   ||||||  || ||   |||||||||||||| |    
T  37483115 catgtatatttttgagatgtatgacttatatccgctgcgactgttgatgaattttatatatgcat-gttgtttgaattttgatgtgaagacgtagcgttt 37483213  T
Q  185 atttcttaaatatttatattatccgtgtgttttattgctt 224  Q
    |||| || |||||||||||||| || |||| |||| ||||    
T  37483214 atttattgaatatttatattattcgcgtgtattatcgctt 37483253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 33628385 - 33628464
Alignment:
Q  95 ttttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagac 175  Q
    |||||||||||| ||||||||||||||||||| |||||| || ||||||||||||||  ||||||||||| ||||||||||    
T  33628385 ttttggagatgtctgatttatatccgctgcgagtgttgagga-ttttatatatgcatgtatgtttggtttttgttgaagac 33628464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 6454833 - 6454613
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||| |||| ||||| ||| ||||||| |||| |||||||||  |||||||||||| ||||  ||||  |||||||  ||| ||  |     
T  6454833 tggatttatt-atgttttggatatttgcccagttgtcggaattttggagaattttgatgatgatgtatgttgacatcataacatgtatgcttttgaatta 6454735  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg--tttctgttgaagacgtagcgtctatttcttaaatatttatat 203  Q
    |||| ||| ||||||||||||||||| |||| ||||||| ||||||     |||||  |||  ||||| |||||  |||||||||||| |||||||||||    
T  6454734 tatggtttgtatccgctgcgactgtt-aagaattttatacatgcatgttattttggattttgagttgatgacgtgacgtctatttcttgaatatttatat 6454636  T
Q  204 tatccgtgtgttttattgcttta 226  Q
    ||| || ||||||||| ||||||    
T  6454635 tattcgcgtgttttatcgcttta 6454613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 22879931 - 22879806
Alignment:
Q  100 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 199  Q
    |||||||||||| | ||||||||||||||||| |||| ||||||| ||||||     ||||| || |||  | ||||| ||||||||||||| |||||||    
T  22879931 gagatgtatgatctttatccgctgcgactgtt-aagaattttatacatgcatgttattttggattttgtgaatgacgtggcgtctatttcttgaatattt 22879833  T
Q  200 atattatccgtgtgttttattgcttta 226  Q
    || |||| || ||||||||| ||||||    
T  22879832 atgttattcgcgtgttttatcgcttta 22879806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 22881528 - 22881440
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatat 95  Q
    ||||||| |||||||  |||||||||  ||| ||||||||||||||||||||| |||| |||  |||||| || | |||||||||||||    
T  22881528 tggatttgtttatgtaatggagattttcccacttgtcgggatttggagaatttttatgttgagatatttttatattatggcatgtatat 22881440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 11963215 - 11963166
Alignment:
Q  177 tagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||||||||| |||||||||||||| || ||||||||| ||||||    
T  11963215 tagcgtctatttcttgaatatttatattattcgcgtgttttatcgcttta 11963166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 21829150 - 21829080
Alignment:
Q  82 catggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt-ttatatatgcat 151  Q
    ||||||||||||||||||||||  ||||| ||||||  ||||||| |||||||  ||| ||||||||||||    
T  21829150 catggcatgtatattttggagacatatgaattatatttgctgcgattgttgaaattttcttatatatgcat 21829080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 40 - 226
Target Start/End: Complemental strand, 19435 - 19250
Alignment:
Q  40 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||| |||||||||||| ||||||||  ||||    
T  19435 tgtcgggatttggagaatttatatgatgatgtattttgatctcatgacatgtagactttggagatgtatgatctatatccgctgcaactgttgataattt 19336  T
Q  140 ttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||  ||   ||||||| || |||||| ||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  19335 ttatatataaat-gttgtttggattttgttgatgacatagcgtctatttcttgaatatttatattattcgtgtgttttatcgcttta 19250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 7186 - 6995
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattt-atatccgctgcgactgttga 133  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||| |||||| |||||||||||||    
T  7186 ccatatgtcggaatttggagaatttatatgatgatgtattttgatcttatgacatgtatattttggagatatatgatttcatatccactgcgactgttga 7087  T
Q  134 agatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |  |||||||||||||||  ||||||||||| || |||||| |||||||||||||||| ||||| |   |||| || ||||||||| ||||||    
T  7086 aattttttatatatgcatgtatgtttggttt-tgctgaagatgtagcgtctatttcttgaatatatgctttattcgcgtgttttatcgcttta 6995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 23194 - 23373
Alignment:
Q  47 atttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatata 146  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||    
T  23194 atttggagaatttatatgatgatgtattttgatcttatgacatgtatattttggagatatatgatttatatccactgcgactgttgaaattttttatata 23293  T
Q  147 tgcatacatgtttggtttctgttgaagacgt-agcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||  ||||||||||| || ||||||||| |||||||||||||| ||||| |   |||| || ||||||||| ||||||    
T  23294 tgcatgtatgtttggttt-tgctgaagacgtaagcgtctatttcttgaatatatgctttattcgcgtgttttatcgcttta 23373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 73357 - 73518
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||     
T  73357 ccatatgtcgggacttggagaatttatatgatgatgtattttgatctcatggcatgtatactttggagatgtatgatttatatccgctgcgattgttgag 73456  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaata 196  Q
     ||||||||||||||||     |||||||| | | | ||||||||| |||||||||| ||||    
T  73457 aatttttatatatgcatgttgatttggtttttatcgtagacgtagcatctatttcttgaata 73518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 2159 - 2382
Alignment:
Q  2 tattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattt-tgatctcatggcatgtatattttgg 100  Q
    |||| |||||||||| ||||||  |||||||  ||||||||||||| || ||||| || |||| |||||||||| |||| |||| ||||||||  ||| |    
T  2159 tattttggatttattcatgttg--gagatttacccatttgtcgggacttagagaacttttatgttgatgtatttgtgatatcatagcatgtatgcttt-g 2255  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatt 198  Q
    |  | | || |||||| |||||| |||||||| ||||||||||| ||||| |    ||||| || ||  |||| |||||||||||||||||| ||||||     
T  2256 aattatttggtttatacccgctgtgactgttg-agatttttatacatgcagatcgttttggattttgaattgatgacgtagcgtctatttctcaaatata 2354  T
Q  199 tatattatccgtgtgttttattgcttta 226  Q
    |   |||| || ||||||||| ||||||    
T  2355 tgccttattcgcgtgttttatcgcttta 2382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 35 - 206
Target Start/End: Original strand, 99014 - 99186
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||     
T  99014 ccatatgtcgggatttggagaatttatataatgatgtatattgatctcatgacatgtatactttggagatgtatgacttatatccgctgcgactgttgag 99113  T
Q  135 gatttttatatatgcatacatgtttg-gtttctgt-tgaagacgtagcgtctatttcttaaatatttatattat 206  Q
     ||||||||||||||||   ||||||  ||| | | ||||||||||||||||||||||| ||||||||||||||    
T  99114 aatttttatatatgcat-gttgtttgaatttttatgtgaagacgtagcgtctatttcttgaatatttatattat 99186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 256842 - 257046
Alignment:
Q  14 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 112  Q
    ||||||||| ||||||||| ||| || | | |||||||| ||| ||||||| || || ||| ||||||| ||| ||||||||| || |||||||||||||    
T  256842 atttatgttatggagattttgcccatatattgggatttgaagattttatataatcatttatattgatcttatgacatgtatatcttagagatgtatgatt 256941  T
Q  113 tatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgt 212  Q
    |||||| |||||||||||||| ||  |||||||||||||  ||  ||| |   ||||||| || ||||||||||||||||||||| | | |||| |||||    
T  256942 tatatctgctgcgactgttgatgaactttatatatgcat--attgttgatagttgttgaaaacatagcgtctatttcttaaatatatgttttattcgtgt 257039  T
Q  213 gttttat 219  Q
    |||||||    
T  257040 gttttat 257046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 35 - 226
Target Start/End: Original strand, 4815 - 5006
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||| |||||||||||| | |||||||||||||||| |||||||||||| || |||||     
T  4815 ccatatgtcgggatttggagaatttttatgatgttgtattttgatttcatggcatgtagactttggagatgtatgatctatatccgctgcaaccgttgag 4914  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
     ||||||||||||||||     |||||||| |||||||||||||||||||||||||| ||||  | | |||| || ||||||||| ||||||    
T  4915 aatttttatatatgcatgttgttttggtttttgttgaagacgtagcgtctatttcttgaataaatgttttattcgcgtgttttatcgcttta 5006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 10384 - 10194
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||     
T  10384 ccatatgttgggatttggagaattta-atgatgatgtattttgatctcatggcatgtagactttggagatgtatgatctatatccgctgcgactgttgag 10286  T
Q  135 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
     | ||||||||||||||     ||| |||| ||||||| ||||||| |||||||||| ||||| |   |||| || ||||||||| ||||||    
T  10285 aacttttatatatgcatgttgattttgtttttgttgaatacgtagcatctatttcttgaatatatgctttattcgcgtgttttatcgcttta 10194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 99282 - 99056
Alignment:
Q  1 ttattctggatt-tatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 99  Q
    ||||| |||||| |||||||||| |||||||||  ||| |||||||||||| |||||||| ||||||| | ||||| | | |||||||||||||| |||     
T  99282 ttattttggattatatttatgttatggagatttacccaattgtcgggatttagagaatttttatgatgttatatttcgttatcatggcatgtatactttt 99183  T
Q  100 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 199  Q
    ||| ||||||||||||||||||||| ||||||||  ||||||||| ||||||     ||||| || | |||| || || ||||||||||||| |||||||    
T  99182 gaggtgtatgatttatatccgctgcaactgttgagaatttttatacatgcatgttattttggatttttttgatgatgtggcgtctatttcttgaatattt 99083  T
Q  200 atattatccgtgtgttttattgcttta 226  Q
    ||||||| || ||||||||| ||||||    
T  99082 atattattcgcgtgttttatcgcttta 99056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 45654 - 45838
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| ||||| || ||| ||||||||||||||||| |||||||||||||||||||||| | |||| |||||||||||  |||||| |||||||||||||     
T  45654 ccatatgtcgagacttgaagaatttatatgatgatttattttgatctcatggcatgtagactttgaagatgtatgatccatatcctctgcgactgttgag 45753  T
Q  135 gatttttatatatgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttat 219  Q
     || |||||||||||||   ||||||| ||| |||||| |||||||||||||||| || |||||||||||||| || |||||||||    
T  45754 aatatttatatatgcat-gttgtttggatttatgttgatgacgtagcgtctattttttgaatatttatattattcgcgtgttttat 45838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 44 - 226
Target Start/End: Original strand, 247879 - 248061
Alignment:
Q  44 gggatttggagaatttatatgatgatgtattt--tgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattttt 141  Q
    |||||||||||| ||||||||||||| ||| |  ||  || ||| ||||||||||||||||||||||||||||||| |||||||||||||||  | ||||    
T  247879 gggatttggagattttatatgatgatatatatattggacttatgacatgtatattttggagatgtatgatttatattcgctgcgactgttgagaaatttt 247978  T
Q  142 atatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||||   ||||||  || |||||||||||||||||||||||||| |||||||||||||| ||||||| |||| ||||||    
T  247979 atatatgcat-gttgtttgaatt-tgttgaagacgtagcgtctatttcttgaatatttatattattcgtgtgtattatcgcttta 248061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 3078 - 3290
Alignment:
Q  16 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 114  Q
    ||||||| |||||||||  ||| |||||||||||| ||| |||||  || ||||||||||||||| ||||| |||||||| ||| ||| ||| || ||||    
T  3078 ttatgttttggagatttacccaattgtcgggattttggaaaattttgatcatgatgtattttgatatcatgacatgtatacttttgaggtgtctggttta 3177  T
Q  115 tatccgctgcgactgttga-agatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtg 213  Q
    ||||||||||||||||||| || || ||||| ||||||     ||||| || |||||| ||||||||||||||||||| |||||||||||||| || |||    
T  3178 tatccgctgcgactgttgagagtttcttatacatgcatgttgttttggattttgttgatgacgtagcgtctatttctttaatatttatattattcgcgtg 3277  T
Q  214 ttttattgcttta 226  Q
    |||||| ||||||    
T  3278 ttttatcgcttta 3290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 5479 - 5330
Alignment:
Q  2 tattctggatttatttatgttgtggaga-tttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||||||||||||| ||||  |||||| |||| |||||||||||| ||| |||| |||||||||| |||||| ||||||| ||| ||||||||||||||    
T  5479 tattctggatttatt-atgtgttggagaatttgcccatttgtcgggttttagagattttatatgataatgtatattgatcttatgacatgtatattttgg 5381  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    ||||||||||||||||||  |||||||||||||  | ||||||||||||||    
T  5380 agatgtatgatttatatcatctgcgactgttgataaattttatatatgcat 5330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 198
Target Start/End: Complemental strand, 11453 - 11291
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 134  Q
    |||| ||||||||||||||| |||| | |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||     
T  11453 ccatatgtcgggatttggaggatttttgtgatgatgcatattgatctcatggcatgtatactttggagatgtatgatttatatccgctgcggctattgag 11354  T
Q  135 g-atttttatatatgcatacatgtt--tggtttctgttgaagacgtagcgtctatttcttaaatatt 198  Q
    | |||||||||||||    ||||||  || | | |||||||||||||||||||||||||| ||||||    
T  11353 gaatttttatatatg----catgttgatgttatttgttgaagacgtagcgtctatttcttgaatatt 11291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 25686 - 25536
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||||||||||||||||| |||||||||||||  ||| ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||  ||| |    
T  25686 ttattctggatttatttacgttgtggagatttacccaattgtcaggatttggagaatttttatgatgatgtattttgacctcatggcatgtatgcttttg 25587  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    |  |||||| ||||||| || ||| ||||||||  ||||||||| ||||||    
T  25586 aagtgtatggtttatattcgttgctactgttgagaatttttatacatgcat 25536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 84557 - 84353
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| || |||||||||  ||||||||||||| |||||||||||||||||||||| || ||||||| ||||| || || ||||||| ||||||  || |    
T  84557 ttattttgaatttatttacattgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttaatttcatggcgtgtatacatttg 84458  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 200  Q
    || ||||||||||||||||||| | ||| ||||  |||||||||||||||||    |||||||| | |||| |||| | ||||||||| || ||||||||    
T  84457 aggtgtatgatttatatccgctacaacttttgagaatttttatatatgcatatcaatttggttttttttgacgacgcaacgtctattt-ttgaatattta 84359  T
Q  201 tattat 206  Q
    ||||||    
T  84358 tattat 84353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 11086 - 11264
Alignment:
Q  48 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 147  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||||| |||  || |||||| |||||||||| ||| ||||||||  ||||||||| ||    
T  11086 tttggagaatttttatgatgatgtattttgatatcatgacatgtatactttttaggtgtatggtttatatccgttgcaactgttgagaatttttatacat 11185  T
Q  148 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||    |||||| || |||||| ||||| |  |||||| |||||||||||||||||| || ||||||||| ||||||    
T  11186 gcatgttggtttggattttgttgatgacgtggaatctattacttaaatatttatattattcgcgtgttttatcgcttta 11264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 2621 - 2472
Alignment:
Q  2 tattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    ||||| ||||||||||||||| ||||||||| ||| |||||||||| |||||||| ||||| |   ||||||| ||||||| ||| |||||||| |||||    
T  2621 tattcaggatttatttatgttatggagattttgcctatttgtcgggttttggagattttatttatggatgtatgttgatcttatgacatgtatactttgg 2522  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
     |||||| || ||||||||||||||||||||| ||| ||||||||||||||    
T  2521 tgatgtaggacttatatccgctgcgactgttg-agaattttatatatgcat 2472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 51424 - 51306
Alignment:
Q  24 tggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatgatttatatccgct 122  Q
    |||||||||  ||||||||||||| ||| |||| || |||| | ||||| ||||||| ||||| |||||||  |||| || | |||| |||||||||| |    
T  51424 tggagatttacccatttgtcgggacttgaagaacttttatgtttatgtatttttgatatcatgacatgtatgctttgaag-tatatggtttatatccgtt 51326  T
Q  123 gcgactgttgaagatttttat 143  Q
    |||||||| | ||||||||||    
T  51325 gcgactgtag-agatttttat 51306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 2008 - 2208
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgta----tatt 96  Q
    ||||| |||||||||||||  |||||||||||  ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    | ||    
T  2008 ttattttggatttatttatactgtggagatttacccatttgtcgggatt-ggagaatttttatgatgatgtattttgacctcatggcatgtatgtttttt 2106  T
Q  97 ttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg-ttgaagacgtagcgtctatttcttaaat 195  Q
    || ||  |||||| |||||||||||| | ||||||||  |||||||||||||| |   ||||||| || || |||| |||||||| |||||||||| |||    
T  2107 tttgaagtgtatggtttatatccgctacaactgttgagaatttttatatatgcct-gttgtttggattttgtttgatgacgtagcatctatttcttgaat 2205  T
Q  196 att 198  Q
    |||    
T  2206 att 2208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 14159 - 14235
Alignment:
Q  21 ttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatatttt 98  Q
    ||||||||||||  ||||||||||||||| ||||||||| |||||||||||||||||| |||||| ||||||| ||||    
T  14159 ttgtggagatttacccatttgtcgggatt-ggagaatttttatgatgatgtattttgacctcatgacatgtatgtttt 14235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 14250 - 14352
Alignment:
Q  104 tgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg-ttgaagacgtagcgtctatttcttaaatatttata 202  Q
    |||||| |||||||||||||| ||||||||  |||||||||||||| |   ||||||| || || |||| ||||  ||||||||||||| ||||||| ||    
T  14250 tgtatggtttatatccgctgcaactgttgagaatttttatatatgcct-gttgtttggattttgtttgatgacgaggcgtctatttcttgaatatttcta 14348  T
Q  203 ttat 206  Q
    ||||    
T  14349 ttat 14352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 3070 - 2852
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||| ||||| |||||||||   |||||||||||| ||||||||||| |||||| |||||||||||| |||||||||||||  |||| || ||     
T  3070 tggatttattcatgtt-tggagatttacgcatttgtcgggacttggagaatttttatgattatgtattttgatatcatggcatgtatgctttgaag-tga 2973  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatatta 205  Q
    ||| |||||||||||||||| ||||||  ||||||||| ||||||     ||||| || ||| ||| |||||| | |||||||||| ||||| | |||||    
T  2972 atggtttatatccgctgcgattgttgagaatttttatacatgcatgttgttttggattttgtatgatgacgtatcatctatttcttgaatatatgtatta 2873  T
Q  206 tccgtgtgttttattgcttta 226  Q
    | || ||||||||| ||||||    
T  2872 ttcgcgtgttttatcgcttta 2852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 26022 - 26141
Alignment:
Q  16 ttatgttgtggagatttggccatttgtcgggatttggagaatttat-atgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 114  Q
    ||||||| |||||||||  ||| ||||||||||||||||||||| | |||||||||||||||||| ||||| |||||||| ||| ||| |||||| ||||    
T  26022 ttatgttttggagatttacccaattgtcgggatttggagaattttttatgatgatgtattttgatatcatgacatgtatacttttgaggtgtatggttta 26121  T
Q  115 tatccgctgcgactgttgaa 134  Q
    |||| |||||||||||||||    
T  26122 tatctgctgcgactgttgaa 26141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 226
Target Start/End: Original strand, 26144 - 26281
Alignment:
Q  90 gtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttc 189  Q
    ||||| ||| ||| |||||| |||||||| ||||||||||||||| |||| |||| ||||||     ||||| || |||||| || ||  ||||||||||    
T  26144 gtatacttttgaggtgtatggtttatatctgctgcgactgttgaaaatttgtatacatgcatgttgttttggattttgttgatgatgtgacgtctatttc 26243  T
Q  190 ttaaatatttatatta-tccgtgtgttttattgcttta 226  Q
    || ||||||||||||| || | ||||||||| ||||||    
T  26244 ttgaatatttatattattcggcgtgttttatcgcttta 26281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 3448 - 3538
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcg 125  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| | |||||||||||||    
T  3448 ccatatgtcgggatttgaagaatttatataatgatgtattttgatctcatgacatgtatactttggagatgtatgttatatatccgctgcg 3538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 224
Target Start/End: Original strand, 6948 - 7147
Alignment:
Q  24 tggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctg 123  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||| |||||| |||| ||||||||  ||| ||| | || | |||||||||||||    
T  6948 tggagatttacccatttgtcgggatttggagaatttttatgatgatgta-tttgatatcatagcatgtatgcttttgagttataaggtttatatccgctg 7046  T
Q  124 cgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgct 223  Q
    | ||||||||| |  |||||| ||||||     ||||  ||  ||||| || |||||||||||||||| |||||||||||||| || || |||||| |||    
T  7047 caactgttgaaaaaatttatacatgcatgttgttttgcatttcgttgatgaagtagcgtctatttcttgaatatttatattattcgcgtattttatcgct 7146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 4573 - 4455
Alignment:
Q  35 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtata-ttttggagatgtatgatttatatccgctgcgactgttga 133  Q
    |||| |||||||||||||||| ||||||||  ||||||| ||||| |||||||||||||| |||||||  |||||| | |||||||||||||||| ||||    
T  4573 ccatatgtcgggatttggagattttatatggcgatgtatgttgatttcatggcatgtatatttttggaagtgtatgttatatatccgctgcgactattga 4474  T
Q  134 -agatttttatatatgcat 151  Q
     | ||||||||||||||||    
T  4473 gaaatttttatatatgcat 4455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 34976 - 35088
Alignment:
Q  40 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 139  Q
    |||| ||||||| ||||||| ||||||||||||||||||| ||||||||||| |||||||||||  ||||| |||||| |||||||| ||||| ||||||    
T  34976 tgtcaggatttgaagaatttttatgatgatgtattttgatatcatggcatgtgtattttggagacatatgaattatattcgctgcgattgttg-agattt 35074  T
Q  140 --ttatatatgcat 151  Q
      ||||||||||||    
T  35075 tcttatatatgcat 35088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 49594 - 49476
Alignment:
Q  35 ccatttgtcgggatttgga-gaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 133  Q
    |||| ||||||||||| || |||||| | ||||||||||||||||| ||||||||| | |||||||||||  ||||| |||||||||||||||||||||     
T  49594 ccatatgtcgggattttgaagaatttttctgatgatgtattttgatatcatggcatatgtattttggagacatatgaattatatccgctgcgactgttg- 49496  T
Q  134 agattt--ttatatatgcat 151  Q
    ||||||  ||||||||||||    
T  49495 agattttcttatatatgcat 49476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 54125 - 54007
Alignment:
Q  35 ccatttgtcgggatttgga-gaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 133  Q
    |||| ||||||||||| || |||||| | ||||||||||||||||| ||||||||| | |||||||||||  ||||| |||||||||||||||||||||     
T  54125 ccatatgtcgggattttgaagaatttttctgatgatgtattttgatatcatggcatatgtattttggagacatatgaattatatccgctgcgactgttg- 54027  T
Q  134 agattt--ttatatatgcat 151  Q
    ||||||  ||||||||||||    
T  54026 agattttcttatatatgcat 54007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 151
Target Start/End: Original strand, 19860 - 20001
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||| || || |||||||||  ||||||||||||| |||||||| || |||||| |||||||||||| |||||||||||||  |||| || | |    
T  19860 tggatttattcatatt-tggagatttacccatttgtcgggacttggagaaattttatgattatgtattttgatatcatggcatgtatgctttgaag-tat 19957  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    ||| |||||||||||| |||||||||  |||||| ||||||||||    
T  19958 atggtttatatccgctacgactgttg-cgattttaatatatgcat 20001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 151
Target Start/End: Original strand, 29436 - 29577
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||| || || |||||||||  ||||||||||||| |||||||| || |||||| |||||||||||| |||||||||||||  |||| || | |    
T  29436 tggatttattcatatt-tggagatttacccatttgtcgggacttggagaaattttatgattatgtattttgatatcatggcatgtatgctttgaag-tat 29533  T
Q  107 atgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    ||| |||||||||||| |||||||||  |||||| ||||||||||    
T  29534 atggtttatatccgctacgactgttg-cgattttaatatatgcat 29577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 31688 - 31824
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggag--at 104  Q
    |||||||||| ||||| |||||||||  ||||||||||||| |||||||| || |||||| |||||| ||||| | ||||||||||| ||||| ||   |    
T  31688 tggatttattcatgtt-tggagatttacccatttgtcgggacttggagaacttttatgattatgtatcttgatataatggcatgtatgttttgaagtatt 31786  T
Q  105 gtatgatttatatccgctgcgactgttgaagatttttat 143  Q
     |||||||||||||||||||||||| || ||||||||||    
T  31787 atatgatttatatccgctgcgactgatg-agatttttat 31824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 99233 - 99455
Alignment:
Q  2 tattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttgg 100  Q
    |||| |||||||||| |||||   |||||||  ||||||||| ||| |||||||| || |||| ||| ||| ||||||| | |||||||||||  ||||     
T  99233 tattttggatttattcatgtta--gagatttacccatttgtcaggacttggagaacttttatgttgacgtacttttgatattatggcatgtatgctttga 99330  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg-ttgaagacgtagcgtctatttcttaaatattt 199  Q
    || | |||| |||||||||||||||||||||| ||||||||||| ||||||     ||||| || || |||| ||||||||||||||||||| ||||| |    
T  99331 ag-tatatggtttatatccgctgcgactgttg-agatttttatacatgcatgttgttttggattttgtttgatgacgtagcgtctatttcttgaatatat 99428  T
Q  200 atattatccgtgtgttttattgcttta 226  Q
     |||||| || ||||||||| ||||||    
T  99429 gtattattcgcgtgttttatcgcttta 99455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 29236 - 29098
Alignment:
Q  2 tattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttgg 100  Q
    |||| |||||||||| ||||||  |||||||  |||| |||||||| |||||||| || |||| ||||||||||| ||| |||||||||||||  ||||     
T  29236 tattttggatttattcatgttg--gagatttacccatgtgtcgggacttggagaacttttatgttgatgtatttttgatatcatggcatgtatcctttga 29139  T
Q  101 agatgtatgatttatatccgctgcgactgttgaagatttttat 143  Q
    || | ||||||||||||||||||||||||||| ||||||||||    
T  29138 ag-tatatgatttatatccgctgcgactgttg-agatttttat 29098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 123517 - 123612
Alignment:
Q  55 aatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgca 150  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||| ||||| ||| ||||  |||| ||||||||||    
T  123517 aatttttatgatgatgtattttgatctcatgacatgtatacttttgaggtgtatgatttatatctgctgcaactattgagaatttatatatatgca 123612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 226
Target Start/End: Complemental strand, 36007 - 35833
Alignment:
Q  48 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 147  Q
    |||||||||||| ||||||||| ||||  ||||||||| |||||||| ||| ||| |||||| |||||||||||||| ||||||||  ||||||||| ||    
T  36007 tttggagaattt-tatgatgat-tattc-gatctcatgtcatgtatacttttgaggtgtatggtttatatccgctgcaactgttgagaatttttatacat 35911  T
Q  148 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||     ||||| || |||||| || || ||||||||||||| |||| ||||||||| || ||||||||| ||||||    
T  35910 gcatgttgttttggattttgttgatgatgtggcgtctatttcttgaata-ttatattattcgcgtgttttatcgcttta 35833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 5856 - 5732
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 106  Q
    |||||||||| ||||  |||||||||| ||| ||||||||||||||||||||| |||  |||  |||||| || ||||||||| ||||  || |||||||    
T  5856 tggatttatt-atgtgttggagatttgcccacttgtcgggatttggagaatttttatactgagatatttttatatcatggcatctatacctttgagatgt 5758  T
Q  107 atgatttatatccgctgcgactgttg 132  Q
    ||||| | ||||||||||||||||||    
T  5757 atgatatttatccgctgcgactgttg 5732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 703 - 483
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||| |||||||||  ||| |||||||||||| |||||||||  |||||||||||| ||||  || | ||||||||  ||| ||  |     
T  703 tggatttatt-atgttttggagatttacccaattgtcgggattttggagaattttgatgatgatgtatgttgacatcgtagcatgtatgcttttgaatta 605  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg-ttgaagacgtagcgtctatttcttaaatatttatatt 204  Q
    |||| |||||||||||||| ||||||||  |  |||||||||||||     ||||| || || |||| || |||||||||||||||| ||||||||||||    
T  604 tatggtttatatccgctgcaactgttgagaacgtttatatatgcatgttgttttggattttgtttgatgatgtagcgtctatttcttcaatatttatatt 505  T
Q  205 atccgtgtgttttattgcttta 226  Q
    ||  | ||||||||| ||||||    
T  504 atttgcgtgttttatcgcttta 483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 22599 - 22723
Alignment:
Q  2 tattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 100  Q
    |||| ||||||| |||||||| ||| ||||| ||| |||||||||| |||| ||| ||||| |  |||| ||||||||  | ||| |||||||| |||||    
T  22599 tattatggatttgtttatgttatggggattttgcctatttgtcgggttttgaagattttatgtattgatatattttgagtttatgacatgtatactttgg 22698  T
Q  101 agatgtatgatttatatccgctgcg 125  Q
    ||||||||| | |||||||| ||||    
T  22699 agatgtatgctatatatccgttgcg 22723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 226
Target Start/End: Complemental strand, 104041 - 103895
Alignment:
Q  77 gatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacg 176  Q
    ||||||||||||||||||||||| || |||||| || ||||||||||| ||||||||  ||||||||| ||||||     ||||| || | |||||||||    
T  104041 gatctcatggcatgtatattttg-aggtgtatggtt-atatccgctgcaactgttgagaatttttatacatgcatgttgttttggattttattgaagacg 103944  T
Q  177 tagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    | ||||||||||||| |||| ||||||||| || ||||||||| ||||||    
T  103943 tggcgtctatttcttgaata-ttatattattcgcgtgttttatcgcttta 103895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 7 - 226
Target Start/End: Original strand, 106657 - 106874
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatg 105  Q
    |||||||||||||||||  || ||||  ||||||||||||| | |||||| || |||||  ||||||||| ||| ||||||||||||||||||| || |     
T  106657 tggatttatttatgttg--gatatttacccatttgtcgggactcggagaactt-tatgacaatgtatttttgatatcatggcatgtatattttgaag-ta 106752  T
Q  106 tatgatttat-atccgctgcgactgttgaagatttttatatatgcatacatgtttgg-tttctgt-tgaagacgtagcgtctatttcttaaatatttata 202  Q
    |||| ||||| ||||||||||||||||| ||| ||||||||||||||   |||||||  || ||| ||| ||||||||||||||||||| ||||||  ||    
T  106753 tatggtttataatccgctgcgactgttg-aga-ttttatatatgcatgattgtttggaattttgtatgatgacgtagcgtctatttcttgaatattatta 106850  T
Q  203 ttatccgtgtgttttattgcttta 226  Q
    |||| ||  |||||||| ||||||    
T  106851 ttattcgcttgttttatcgcttta 106874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 151
Target Start/End: Original strand, 122050 - 122139
Alignment:
Q  61 tatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    ||||||||| ||| ||||||| | | ||||||||||| |||||||||||| || ||||| |||||||||||||  | ||||||||||||||    
T  122050 tatgatgatatatattgatcttaggacatgtatattt-ggagatgtatgaattgtatccactgcgactgttgagaaattttatatatgcat 122139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 12545 - 12624
Alignment:
Q  43 cgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgct 122  Q
    |||||||| |||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||| | ||||| ||||    
T  12545 cgggattttgagaatttatatgatgatgtattttgatccgatgacatgtatactttggagatgtatgctatatatacgct 12624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 12677 - 12729
Alignment:
Q  174 acgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||| ||||||||||| |||||||||||||| || ||||||||| ||||||    
T  12677 acgtagagtctatttcttgaatatttatattattcgcgtgttttatcgcttta 12729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 226
Target Start/End: Complemental strand, 20230 - 20055
Alignment:
Q  48 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 147  Q
    |||||||||||| ||||||||||||||  ||||||||| |||||||| ||| ||| ||||||||||||||  ||||| ||||||||  ||||||||| ||    
T  20230 tttggagaattt-tatgatgatgtattc-gatctcatgtcatgtatacttttgaggtgtatgatttatatttgctgcaactgttgagaatttttatacat 20133  T
Q  148 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||     ||||| || |||| | |||||  |||||||||||| |||| ||||||||| || || |||||| ||||||    
T  20132 gcatgttgttttggattttgttcatgacgtgacgtctatttcttgaata-ttatattattcgcgttttttatcgcttta 20055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 25684 - 25871
Alignment:
Q  35 ccatttgtcgggatttggagaatttat--atgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttg 132  Q
    ||||||||||||| ||||||||||| |  ||||| |||||||||||| |||||||||||||  |||| || | |||| ||||||||   || ||||||||    
T  25684 ccatttgtcgggacttggagaatttttttatgattatgtattttgatatcatggcatgtatgctttgaag-tatatggtttatatcaattgtgactgttg 25782  T
Q  133 aagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttat 219  Q
    |  ||||||||| |||||      |||||||| ||  |||| ||||||||||||||||||| ||||| | |||||| ||||||||||||    
T  25783 agaatttttatacatgcacgttgttttggtttttgtattgatgacgtagcgtctatttcttgaatatatgtattattcgtgtgttttat 25871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 151
Target Start/End: Complemental strand, 11564 - 11423
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  |||||||  ||||||||||||| |||||||| || |||| || |||| |||| || ||||| |||||||  |||| || |     
T  11564 tggatttattcatgttg--gagatttacccatttgtcgggacttggagaacttttatgttgttgtattttttatatcatgtcatgtattctttgaag-ta 11468  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcat 151  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||    
T  11467 tatggtttatatccgctgcgactgttg-agatttttatacatgcat 11423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 18741 - 18673
Alignment:
Q  24 tggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtat 93  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||| |||||| |||| ||||||||    
T  18741 tggagatttacccatttgtcgggatttggagaatttttatgatgatgta-tttgatatcatagcatgtat 18673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 3995 - 3871
Alignment:
Q  102 gatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatattt 199  Q
    ||||||||| ||||||||| |||||||||||| || ||||||||||||||   |||||| |||  |   ||||||| ||||||||||||||| |||| ||    
T  3995 gatgtatgacttatatccgttgcgactgttgatgaattttatatatgcat-gttgtttgattttggaagtgaagacatagcgtctatttcttgaata-tt 3898  T
Q  200 atattatccgtgtgttttattgcttta 226  Q
    ||||||| ||| |||||||| ||||||    
T  3897 atattattcgtatgttttatcgcttta 3871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 9677 - 9619
Alignment:
Q  168 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||| |||||| | |||||||||| |||||||||||||| |||||||||||||||||||    
T  9677 ttgatgacgtatcatctatttcttgaatatttatattattcgtgtgttttattgcttta 9619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 19102 - 19044
Alignment:
Q  168 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||| |||||| | |||||||||| |||||||||||||| |||||||||||||||||||    
T  19102 ttgatgacgtatcatctatttcttgaatatttatattattcgtgtgttttattgcttta 19044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 226
Target Start/End: Original strand, 15978 - 16118
Alignment:
Q  87 catgtatattttggagatgtatgatttatatccgctgcgactgttgaaga--tttttatatatgcatacatgtttggtttctgttgaagacgtagcgtct 184  Q
    ||||| ||||||||| ||||||| |||||||||||||||||| |||| ||  ||| |||||||||||     |||||  ||||||||||||| | |||||    
T  15978 catgtgtattttggatatgtatgttttatatccgctgcgacttttgaggaactttatatatatgcatgttgttttggaatctgttgaagacg-aacgtct 16076  T
Q  185 atttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    || |||| |||||||  ||||| || ||||||||| ||||||    
T  16077 atgtcttgaatatttgcattattcgcgtgttttatcgcttta 16118  T

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Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 34237 - 34307
Alignment:
Q  54 gaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgc 124  Q
    |||||| |||| |||||||| ||||||| |||  |||||||||||| |||||||||| |||||||||||||    
T  34237 gaatttttatgttgatgtatattgatcttatgatatgtatattttgaagatgtatgacttatatccgctgc 34307  T

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Target: scaffold0086; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 34352 - 34409
Alignment:
Q  169 tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||| |||| ||||||||||| |||||||||||||| || |||| |||| ||||||    
T  34352 tgaagatgtagggtctatttcttgaatatttatattattcgcgtgtattatcgcttta 34409  T

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Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16723 - 16789
Alignment:
Q  1 ttattctggatttatttatgttgtggaga-tttggccatttgtcgggatttggagaatttatatgat 66  Q
    ||||||||||||||||||||||||| ||| |||  |||||||||||||| |||||| ||||||||||    
T  16723 ttattctggatttatttatgttgtgaagattttacccatttgtcgggatgtggagattttatatgat 16789  T

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Target: scaffold1068 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 1282 - 1229
Alignment:
Q  173 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||| ||||||    
T  1282 gacgtagcgtctatttcttgaatatttatattattcgcgtgttttatcgcttta 1229  T

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Target: scaffold1068; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 1362 - 1293
Alignment:
Q  24 tggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtat 93  Q
    |||||||||  ||| ||||||||| |||||||| || |||| |||||||||||||| |||||||||||||    
T  1362 tggagatttacccacttgtcgggacttggagaacttttatgttgatgtattttgatatcatggcatgtat 1293  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 226
Target Start/End: Original strand, 199487 - 199607
Alignment:
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgtt-gaagacgtagcgtctatttcttaaatatttatatt 204  Q
    |||| |||||||||||||||||||||||  ||||||||| ||||||     ||||| || |||| || ||||||||||||||||||| ||||| |||||     
T  199487 tatgttttatatccgctgcgactgttgac-atttttatacatgcatgttgttttggattttgtttgatgacgtagcgtctatttcttgaatatatatata 199585  T
Q  205 atccgtgtgttttattgcttta 226  Q
    || || ||||||||| ||||||    
T  199586 attcgcgtgttttatcgcttta 199607  T

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Target: scaffold0786 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 4809 - 4656
Alignment:
Q  73 ttttgatctcatggcatgtatattttggagatgtatgatttat-atccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tg 170  Q
    ||||||| |||||||||||||||||| ||  | |||||||||| ||| ||||||||||||| ||||||||||| ||||||     |||||  | ||| ||    
T  4809 ttttgatatcatggcatgtatatttt-gaattatatgatttataatctgctgcgactgttg-agatttttatacatgcatgttgttttggaatttgtgtg 4712  T
Q  171 aagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    | ||||||||||||||||||| ||||| | |||||| || |||||| || ||||||    
T  4711 atgacgtagcgtctatttcttgaatatatgtattattcgcgtgtttaatcgcttta 4656  T

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Target: scaffold0390 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 3342 - 3265
Alignment:
Q  73 ttttgatctcatggcatgtatattttggagatgtatgatttat-atccgctgcgactgttgaagatttttatatatgcat 151  Q
    ||||||| |||||||||||||||||| ||  | |||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  3342 ttttgatatcatggcatgtatatttt-gaattatatgatttataatccgctgcgactgttg-agatttttatacatgcat 3265  T

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Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 7190 - 7398
Alignment:
Q  7 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatg 105  Q
    |||||||||| ||||||  |||||||  ||||||||| ||| || ||||| || |||| ||||||||||| ||| |||||||||||||| |||| || |     
T  7190 tggatttattcatgttg--gagatttacccatttgtcaggactttgagaactt-tatgttgatgtatttttgatatcatggcatgtatactttgaag-ta 7285  T
Q  106 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatatt 204  Q
    |||| ||||||||||||| |||  ||| ||||||||||| ||||||   | ||||| || ||| ||   |||||||||||||||||| ||||| | ||||    
T  7286 tatggtttatatccgctgtgacaattg-agatttttatacatgcat-gttatttggattttgtatgctcacgtagcgtctatttcttgaatatatgtatt 7383  T
Q  205 atccgtgtgttttat 219  Q
    || || |||||||||    
T  7384 attcgcgtgttttat 7398  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 141342 - 141518
Alignment:
Q  48 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtat-gatttatatccgctgcgactgttgaagatttttatata 146  Q
    |||||||||||| ||||||||||||||   |||||||  |||||||| ||| ||| ||||| | |||||||||||||| ||||||||  ||||||||| |    
T  141342 tttggagaattt-tatgatgatgtattca-atctcattacatgtatacttttgaggtgtattggtttatatccgctgcaactgttgagaatttttataca 141439  T
Q  147 tgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||     ||||| || |||||| ||| | || |||||||||| |||| ||||||||| |  ||||||||| ||||||    
T  141440 tgcatgttgttttggattttgttgaggacctggcatctatttcttgaata-ttatattattcacgtgttttatcgcttta 141518  T

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Target: scaffold0258 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 8272 - 8214
Alignment:
Q  168 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||||| |||||||||||| ||||||| |||||| || ||||||||| ||||||    
T  8272 ttgaagacgtaacgtctatttcttgaatatttgtattattcgcgtgttttatcgcttta 8214  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 130013 - 129961
Alignment:
Q  1 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttgga 53  Q
    ||||| |||| ||||||||||| |||||||||  |||||||||||||||||||    
T  130013 ttattttggacttatttatgttttggagatttacccatttgtcgggatttgga 129961  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 64677 - 64723
Alignment:
Q  180 cgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    |||||||||||| ||||||| |||||| || ||||||||||||||||    
T  64677 cgtctatttcttgaatatttgtattattcgggtgttttattgcttta 64723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 9321 - 9268
Alignment:
Q  173 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||||||||||||| ||||| | |||||| || ||||||||| ||||||    
T  9321 gacgtagcgtctatttcttgaatatatttattattcgcgtgttttatcgcttta 9268  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 70511 - 70564
Alignment:
Q  173 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 226  Q
    ||||||||||||||||||| ||||||  |||||| || ||||||||| ||||||    
T  70511 gacgtagcgtctatttcttgaatattattattattcgcgtgttttatcgcttta 70564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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