View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5492_high_37 (Length: 309)
Name: NF5492_high_37
Description: NF5492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5492_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 24291150 - 24290854
Alignment:
| Q |
1 |
ccaccgcaattgccacagcacctgtcgataagacaaattcagagggttcaatatcataattttgcattatatatcgagagttttagaaaaaactgaatgg |
100 |
Q |
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| T |
24291150 |
ccaccgcaattgccacagcacctgtcgataagacaaattcagagggttcaatatcataattttgcattatatatcgagagttttagaaaaaactgaatgg |
24291051 |
T |
|
| Q |
101 |
gattaattaccagttgttagtgcagcaagaannnnnnnngtcaacggagcatctccaacatggtctttcccaacatacaaattcttaacctgttcaattc |
200 |
Q |
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| T |
24291050 |
gattaattaccagttgttagtgcagcaagaattttttttgtcaacggagcatctccaacatggtctttcccaacatacaaattcttaacctgttcaattc |
24290951 |
T |
|
| Q |
201 |
caaagtaattaacacatcagattgcatatgcaaaaaattagatatgaactcaaacaaatgaacaatctttcagacacggttgattactcacaggttc |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
24290950 |
caaagtaattaacacatcagattgcatatgcaaaaaattagatatgaactcaaagaaatgaacaatctttcagacacggttgattactcacaggttc |
24290854 |
T |
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