View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5492_high_52 (Length: 254)
Name: NF5492_high_52
Description: NF5492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5492_high_52 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28118988 - 28118743
Alignment:
| Q |
1 |
gaaggaaaaattgaaaggaaagaattaaggtagtgtttgtaggaatatttggtggggttatatagctagtgatttaatgaggaaatttaagaaaaattct |
100 |
Q |
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| T |
28118988 |
gaaggaaaaattgaaaggaaagaattaaggtagtgtttgtaggaatatttggtggggttatatagctagtgatttaatgaggaaatttaagaaaaattct |
28118889 |
T |
|
| Q |
101 |
ttaaagccacgcgaaggagcaaaggcttaacctaaacatttttgcttcttgcgtgaagaaaaacataagataaaaatttatataagattggttattggtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28118888 |
ttaaagccacgcgaaggagcaaaggcttaacctaaacatttttgcttcttgcgtgaagaaaaacataagataaaaatttatataagattggttattggtt |
28118789 |
T |
|
| Q |
201 |
atatataccttaaatgattcacttttcctcttttgtccttcttctc |
246 |
Q |
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| T |
28118788 |
atatataccttaaatgattcacttttcctcttttgtccttcttctc |
28118743 |
T |
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