View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5493-Insertion-2 (Length: 401)
Name: NF5493-Insertion-2
Description: NF5493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5493-Insertion-2 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 8 - 401
Target Start/End: Original strand, 22945014 - 22945407
Alignment:
| Q |
8 |
taatgttggttctttatattatatcaaaggtttgactacaattcaagggtttggttatgatagcgttaaagatgactacaaggtcattcaacatgtaaag |
107 |
Q |
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| T |
22945014 |
taatgttggttctttatattatatcaaaggtttgactacaattcaagggtttggttatgatagcgttaaagatgactacaaggtcattcaacatgtaaag |
22945113 |
T |
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| Q |
108 |
cttcatccgttcaaccgtcgagtagtcatgccaaagatttataaaaacttgtgggaaatttatagcctgaaaagtaagtcatggagaaaactcgatgtcg |
207 |
Q |
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|||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22945114 |
cttcttccgttcaacagtcgagtagtcatgccaaagatttataaaaacttgtgggaaatttatagcctgaaaagtaagtcatggagaaaactcgatgtcg |
22945213 |
T |
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| Q |
208 |
atatgccttgtcgtgatacaaacattgatgatgtgtacatgaatggcatgtgccattggtggggaataagaaataatggagagtatttggtgtcatttga |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22945214 |
atatgccttgtcgtgatacaaacattgatgatgtgtacatgaatggcatgtgccattggtggggaataagaaataatggagagtatttggtgtcatttga |
22945313 |
T |
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| Q |
308 |
tttgagcaacgaagtattccttacaactcatgtacctcttgatatgtatgttttttctaaatatgttgagagacacctgacagtgttaaatatg |
401 |
Q |
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||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22945314 |
tttgagcgacgaagtattccttacaactcaagtacctcttgatatgtatgttttttctaaatatgttgagagacacctgacagtgttaaatatg |
22945407 |
T |
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