View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5493-Insertion-3 (Length: 265)
Name: NF5493-Insertion-3
Description: NF5493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5493-Insertion-3 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 265
Target Start/End: Complemental strand, 625215 - 624957
Alignment:
| Q |
7 |
atgaatagggtgagtagcttaatagatcaatcatgcatttgaatcgataacaaccaatgagacctaatgactaaatcagtttgatgaacaagttctagtc |
106 |
Q |
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| T |
625215 |
atgactagggtgagtagcttaatagatcaatcatgcatttgaatcgataagaaccaatgagacctaatgactaaatcagtttgatgaacaagttctagtc |
625116 |
T |
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| Q |
107 |
cgttcacatgttattataatacatatttttaagaaatgtaatcatnnnnnnnnnnnnnnnnnnnngagcgaaatcgggacttcatcttctcaaagagcta |
206 |
Q |
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| T |
625115 |
cgttcacatgttattataatacatatttttaagaaatgtaatcataaaaaattaaaaaataaaaagagtgaaatcgggacttcatcttctcaaagagcta |
625016 |
T |
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| Q |
207 |
ggaaccctaaatagctaatccaaaacttcattgtggttggtcgaccacattctcttcct |
265 |
Q |
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| T |
625015 |
ggaaccctaaacagctaatccaaaacttcattgtggttggtcgaccacattctattcct |
624957 |
T |
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