View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5494-Insertion-7 (Length: 776)

Name: NF5494-Insertion-7
Description: NF5494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5494-Insertion-7
NF5494-Insertion-7
[»] chr8 (8 HSPs)
chr8 (8-484)||(30172434-30172901)
chr8 (624-695)||(30172215-30172286)
chr8 (573-608)||(30172280-30172315)
chr8 (125-155)||(5290566-5290596)
chr8 (117-155)||(12972773-12972811)
chr8 (112-166)||(40356783-40356837)
chr8 (124-161)||(6918955-6918992)
chr8 (112-161)||(26717169-26717218)
[»] chr1 (4 HSPs)
chr1 (111-151)||(4180714-4180754)
chr1 (109-155)||(46712282-46712328)
chr1 (116-166)||(870961-871011)
chr1 (115-148)||(41638432-41638465)
[»] chr7 (4 HSPs)
chr7 (124-171)||(45078217-45078264)
chr7 (109-152)||(5369807-5369850)
chr7 (111-166)||(39362040-39362095)
chr7 (111-156)||(29574715-29574760)
[»] chr6 (2 HSPs)
chr6 (112-161)||(2732338-2732387)
chr6 (117-155)||(31668800-31668838)
[»] chr5 (6 HSPs)
chr5 (112-152)||(34198347-34198387)
chr5 (123-170)||(29365542-29365589)
chr5 (117-155)||(26516215-26516253)
chr5 (121-166)||(6738511-6738556)
chr5 (126-155)||(7096242-7096271)
chr5 (121-166)||(10391274-10391319)
[»] chr4 (4 HSPs)
chr4 (112-171)||(23819002-23819061)
chr4 (113-156)||(28582023-28582066)
chr4 (112-147)||(30207693-30207728)
chr4 (117-154)||(54414866-54414903)
[»] chr3 (4 HSPs)
chr3 (117-156)||(28842971-28843010)
chr3 (119-161)||(16790465-16790507)
chr3 (121-167)||(49772771-49772817)
chr3 (122-155)||(33307695-33307728)
[»] chr2 (3 HSPs)
chr2 (108-155)||(17952816-17952863)
chr2 (112-166)||(10150667-10150721)
chr2 (117-166)||(44606192-44606241)
[»] scaffold0654 (1 HSPs)
scaffold0654 (117-155)||(6752-6790)
[»] scaffold0014 (1 HSPs)
scaffold0014 (117-155)||(116671-116709)


Alignment Details
Target: chr8 (Bit Score: 441; Significance: 0; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 8 - 484
Target Start/End: Complemental strand, 30172901 - 30172434
Alignment:
Q  8 gatacctcattttcaatgacagctatccgcttgccatgttgggatgtgagaatatgattcagaagagtggtctgcagtacagaaaactcgattataaact 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30172901 gatacctcattttcaatgacagctatccgcttgccatgttgggatgtgagaatatgattcagaagagtggtctgcagtacagaaaactcgattataaact 30172802  T
Q  108 aaatttaattaagcacttatcatacaagtgcttatgtataagctattttcataataaaaataaagtagcacctttccagagccgagaaaaccggtaatga 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30172801 aaatttaattaagcacttatcatacaagtgcttatgtataagctattttgataataaaaataaagtagcacctttccagagccgagaaaaccggtaatga 30172702  T
Q  208 ttgtagctggaatacgattatcaacagaagcttcttcggcgtgggttggagcagagttaatgtacctgaaacttccataatagaagaagttattatggaa 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
T  30172701 ttgtagctggaatacgattatcaacagaagcttcttcggcgtgggttggagcagagttaatgtacctgaaacttccataatagaagaagtt--------- 30172611  T
Q  308 attaggtgaaacgaaggaatgaagagtggtgatagaacggagttgaaggggtgatgattgaacagttcggaaaaaggttttgacggaatttgctatagtc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30172610 attaggtgaaacgaaggaatgaagagtggtgatagaacggagttgaaggggtgatgattgaacagttcggaaaaaggttttgacggaatttgctatagtc 30172511  T
Q  408 atgtatctcttcatcgttggaatggaaaagggaagaaaatcaagagggaaatggttaaacccctcgtataaggaggg 484  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30172510 atgtatctcttcatcgttggaatggaaaagggaagaaaatcaagagggaaatggttaaacccctcgtataaggaggg 30172434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 624 - 695
Target Start/End: Complemental strand, 30172286 - 30172215
Alignment:
Q  624 catttatggatacatgtgatcaagttcaatgaaaatatagagattgagacacawagtttgagcaaacggaag 695  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||    
T  30172286 catttatggatacatgtgatcaagttcaatcaaaatatagagattgaaatacaaagtttgagcaaacggaag 30172215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 573 - 608
Target Start/End: Complemental strand, 30172315 - 30172280
Alignment:
Q  573 cctattcttcatctctcatttttaatcttcatttat 608  Q
    ||||||||||||||||||||||||||||||||||||    
T  30172315 cctattcttcatctctcatttttaatcttcatttat 30172280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 5290566 - 5290596
Alignment:
Q  125 tatcatacaagtgcttatgtataagctattt 155  Q
    |||||||||||||||||||||||||||||||    
T  5290566 tatcatacaagtgcttatgtataagctattt 5290596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 12972773 - 12972811
Alignment:
Q  117 taagcacttatcatacaagtgcttatgtataagctattt 155  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  12972773 taagcatttatcatataagtgcttatgtataagctattt 12972811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 40356783 - 40356837
Alignment:
Q  112 ttaattaagcacttatcatacaagtgcttatgtataagctattttcataataaaa 166  Q
    |||||||| ||||| ||||| |||||||||| ||||||||||||  |||||||||    
T  40356783 ttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaa 40356837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 6918955 - 6918992
Alignment:
Q  124 ttatcatacaagtgcttatgtataagctattttcataa 161  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  6918955 ttatcatataagtgcttatgtataagctatttttataa 6918992  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 26717169 - 26717218
Alignment:
Q  112 ttaattaagcacttatcatacaagtgcttatgtataagctattttcataa 161  Q
    |||||||||||||||||||| |||||||| || |||||||| ||| ||||    
T  26717169 ttaattaagcacttatcatataagtgcttctgaataagctaattttataa 26717218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 4180754 - 4180714
Alignment:
Q  111 tttaattaagcacttatcatacaagtgcttatgtataagct 151  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  4180754 tttaattaagcacttatcatataagtgcttatgtataagct 4180714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 46712282 - 46712328
Alignment:
Q  109 aatttaattaagcacttatcatacaagtgcttatgtataagctattt 155  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  46712282 aatttaattaaacacttatcacacaagtgcttaggtataagctattt 46712328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 870961 - 871011
Alignment:
Q  116 ttaagcacttatcatacaagtgcttatgtataagctattttcataataaaa 166  Q
    |||||| ||||||||| |||||||||||||||| ||||||| |||| ||||    
T  870961 ttaagcgcttatcatataagtgcttatgtataaactatttttataacaaaa 871011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 41638465 - 41638432
Alignment:
Q  115 attaagcacttatcatacaagtgcttatgtataa 148  Q
    ||||||||||||||||| ||||||||||||||||    
T  41638465 attaagcacttatcatataagtgcttatgtataa 41638432  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000007; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 45078217 - 45078264
Alignment:
Q  124 ttatcatacaagtgcttatgtataagctattttcataataaaaataaa 171  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||    
T  45078217 ttatcatataagtgcttatgtataagctatttttataacaaaaataaa 45078264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 152
Target Start/End: Complemental strand, 5369850 - 5369807
Alignment:
Q  109 aatttaattaagcacttatcatacaagtgcttatgtataagcta 152  Q
    |||||||||||||||||| || | ||||||||||||||||||||    
T  5369850 aatttaattaagcacttagcaaataagtgcttatgtataagcta 5369807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 39362040 - 39362095
Alignment:
Q  111 tttaattaagcacttatcatacaagtgcttatgtataagctattttcataataaaa 166  Q
    |||||||||||||||||   | |||  |||||||||||||||||||||||||||||    
T  39362040 tttaattaagcacttatagcataagcacttatgtataagctattttcataataaaa 39362095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 29574760 - 29574715
Alignment:
Q  111 tttaattaagcacttatcatacaagtgcttatgtataagctatttt 156  Q
    |||||||||||  |||||||| || |||||||||||||||||||||    
T  29574760 tttaattaagcgtttatcatataaatgcttatgtataagctatttt 29574715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 2732387 - 2732338
Alignment:
Q  112 ttaattaagcacttatcatacaagtgcttatgtataagctattttcataa 161  Q
    |||||||||||| |||||| |||||| |||||||||||||||||| ||||    
T  2732387 ttaattaagcacctatcatgcaagtgtttatgtataagctatttttataa 2732338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 31668838 - 31668800
Alignment:
Q  117 taagcacttatcatacaagtgcttatgtataagctattt 155  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  31668838 taagcaattatcatataagtgcttatgtataagctattt 31668800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000004; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 34198347 - 34198387
Alignment:
Q  112 ttaattaagcacttatcatacaagtgcttatgtataagcta 152  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  34198347 ttaattaagcacttatcatataagtgcttatgtacaagcta 34198387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 29365542 - 29365589
Alignment:
Q  123 cttatcatacaagtgcttatgtataagctattttcataataaaaataa 170  Q
    ||||||||| ||||||| |||||||||||||||| || ||||||||||    
T  29365542 cttatcatataagtgctcatgtataagctatttttatgataaaaataa 29365589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 26516215 - 26516253
Alignment:
Q  117 taagcacttatcatacaagtgcttatgtataagctattt 155  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  26516215 taagcgcttatcatataagtgcttatgtataagctattt 26516253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 6738556 - 6738511
Alignment:
Q  121 cacttatcatacaagtgcttatgtataagctattttcataataaaa 166  Q
    ||||||||||| |||| ||||||||||||||||||  |||||||||    
T  6738556 cacttatcatataagtacttatgtataagctatttcaataataaaa 6738511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 155
Target Start/End: Complemental strand, 7096271 - 7096242
Alignment:
Q  126 atcatacaagtgcttatgtataagctattt 155  Q
    ||||||||||||||||||||||||||||||    
T  7096271 atcatacaagtgcttatgtataagctattt 7096242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 10391274 - 10391319
Alignment:
Q  121 cacttatcatacaagtgcttatgtataagctattttcataataaaa 166  Q
    ||||||||||| ||||||||| |||||||||||||| |||| ||||    
T  10391274 cacttatcatataagtgcttacgtataagctatttttataacaaaa 10391319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 23819002 - 23819061
Alignment:
Q  112 ttaattaagcacttatcatacaagtgcttatgtataagctattttcataataaaaataaa 171  Q
    |||||| |||| |||||||||||||| ||||||||||| ||||| ||||| ||| |||||    
T  23819002 ttaatttagcatttatcatacaagtgtttatgtataagttatttccataacaaatataaa 23819061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 28582066 - 28582023
Alignment:
Q  113 taattaagcacttatcatacaagtgcttatgtataagctatttt 156  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||    
T  28582066 taattaagcacttatcatagaagtgtttatgtataaactatttt 28582023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 30207728 - 30207693
Alignment:
Q  112 ttaattaagcacttatcatacaagtgcttatgtata 147  Q
    |||||||||||||||||||| |||||||||||||||    
T  30207728 ttaattaagcacttatcatataagtgcttatgtata 30207693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 54414866 - 54414903
Alignment:
Q  117 taagcacttatcatacaagtgcttatgtataagctatt 154  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  54414866 taagcgcttatcatataagtgcttatgtataagctatt 54414903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 28843010 - 28842971
Alignment:
Q  117 taagcacttatcatacaagtgcttatgtataagctatttt 156  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  28843010 taagcgcttatcatataagtgcttatgtataagctatttt 28842971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 16790507 - 16790465
Alignment:
Q  119 agcacttatcatacaagtgcttatgtataagctattttcataa 161  Q
    |||| |||||||| |||||||||||||||||||||||| ||||    
T  16790507 agcatttatcatataagtgcttatgtataagctatttttataa 16790465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 49772817 - 49772771
Alignment:
Q  121 cacttatcatacaagtgcttatgtataagctattttcataataaaaa 167  Q
    ||||||||||| ||||| ||||||||||||||||||  |||||||||    
T  49772817 cacttatcatataagtgtttatgtataagctatttttgtaataaaaa 49772771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 33307728 - 33307695
Alignment:
Q  122 acttatcatacaagtgcttatgtataagctattt 155  Q
    |||||||||| |||||||||||||||||||||||    
T  33307728 acttatcatataagtgcttatgtataagctattt 33307695  T

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Target: chr2 (Bit Score: 32; Significance: 0.00000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 17952863 - 17952816
Alignment:
Q  108 aaatttaattaagcacttatcatacaagtgcttatgtataagctattt 155  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||||||||    
T  17952863 aaatttaataaagcacttatcatataagagcttatatataagctattt 17952816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 10150667 - 10150721
Alignment:
Q  112 ttaattaagcacttatcatacaagtgcttatgtataagctattttcataataaaa 166  Q
    |||||||||||||||| ||| ||||| ||||||||||| |||||  |||||||||    
T  10150667 ttaattaagcacttattatataagtgtttatgtataagttatttctataataaaa 10150721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 44606241 - 44606192
Alignment:
Q  117 taagcacttatcatacaagtgcttatgtataagctattttcataataaaa 166  Q
    ||||| ||||| ||| ||||| ||||||||||||||||||||||| ||||    
T  44606241 taagcgcttattatataagtgtttatgtataagctattttcataacaaaa 44606192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 6790 - 6752
Alignment:
Q  117 taagcacttatcatacaagtgcttatgtataagctattt 155  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  6790 taagcacttatcatataagtgcttatgtataaactattt 6752  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 116709 - 116671
Alignment:
Q  117 taagcacttatcatacaagtgcttatgtataagctattt 155  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  116709 taagcacttatcatataagtgcttatgtataaactattt 116671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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