View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5494_high_4 (Length: 351)

Name: NF5494_high_4
Description: NF5494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5494_high_4
NF5494_high_4
[»] chr7 (69 HSPs)
chr7 (142-272)||(31425510-31425640)
chr7 (144-272)||(21917333-21917461)
chr7 (144-272)||(23232051-23232179)
chr7 (142-272)||(18217839-18217969)
chr7 (142-272)||(22486404-22486534)
chr7 (142-271)||(1842904-1843033)
chr7 (146-272)||(3872186-3872312)
chr7 (146-271)||(3904478-3904603)
chr7 (142-271)||(24605848-24605977)
chr7 (141-272)||(21623030-21623160)
chr7 (144-271)||(47523650-47523777)
chr7 (142-272)||(6849210-6849340)
chr7 (142-272)||(23750735-23750865)
chr7 (144-272)||(27806030-27806158)
chr7 (144-271)||(28800890-28801017)
chr7 (142-272)||(23577188-23577318)
chr7 (142-271)||(9698538-9698667)
chr7 (142-271)||(11036517-11036646)
chr7 (142-271)||(14786635-14786764)
chr7 (151-271)||(2650828-2650948)
chr7 (144-272)||(7733311-7733439)
chr7 (142-261)||(20174030-20174149)
chr7 (151-272)||(23539251-23539372)
chr7 (142-271)||(37135285-37135414)
chr7 (142-271)||(39979624-39979753)
chr7 (142-241)||(10050866-10050965)
chr7 (144-271)||(15014405-15014532)
chr7 (156-271)||(48933160-48933275)
chr7 (142-272)||(1907365-1907495)
chr7 (142-271)||(20429475-20429604)
chr7 (142-271)||(40847435-40847564)
chr7 (142-272)||(816190-816320)
chr7 (142-271)||(23699825-23699954)
chr7 (146-271)||(33427704-33427828)
chr7 (142-271)||(38057642-38057771)
chr7 (142-254)||(36636516-36636628)
chr7 (142-241)||(45664778-45664877)
chr7 (146-271)||(4514779-4514904)
chr7 (144-272)||(15969796-15969925)
chr7 (142-274)||(21871582-21871710)
chr7 (146-272)||(2093361-2093487)
chr7 (145-255)||(31042264-31042374)
chr7 (146-271)||(1824200-1824325)
chr7 (142-270)||(24140460-24140588)
chr7 (144-271)||(42926419-42926547)
chr7 (146-261)||(26577279-26577394)
chr7 (142-265)||(32267357-32267479)
chr7 (145-262)||(11852021-11852138)
chr7 (142-263)||(22501604-22501725)
chr7 (145-262)||(26415437-26415554)
chr7 (142-261)||(2457680-2457797)
chr7 (142-271)||(20923958-20924087)
chr7 (157-261)||(27304895-27304999)
chr7 (142-271)||(36993830-36993959)
chr7 (142-272)||(10222629-10222758)
chr7 (142-271)||(27130344-27130471)
chr7 (142-275)||(25777108-25777241)
chr7 (170-270)||(27132722-27132822)
chr7 (142-241)||(11890177-11890276)
chr7 (142-271)||(687887-688005)
chr7 (146-261)||(1822006-1822118)
chr7 (164-261)||(1841793-1841889)
chr7 (170-229)||(15330247-15330306)
chr7 (142-264)||(5106740-5106861)
chr7 (205-271)||(38090336-38090402)
chr7 (178-261)||(8116516-8116599)
chr7 (226-271)||(7740672-7740717)
chr7 (159-191)||(5235420-5235452)
chr7 (224-272)||(30908944-30908992)
[»] chr3 (91 HSPs)
chr3 (142-272)||(27449094-27449224)
chr3 (141-272)||(48404865-48404996)
chr3 (142-271)||(19269864-19269993)
chr3 (142-272)||(5260943-5261073)
chr3 (142-271)||(13921331-13921460)
chr3 (144-271)||(25882578-25882705)
chr3 (141-272)||(29236049-29236180)
chr3 (141-271)||(21816726-21816856)
chr3 (146-271)||(13905038-13905163)
chr3 (144-271)||(18091547-18091674)
chr3 (142-272)||(11007682-11007812)
chr3 (142-272)||(19223455-19223585)
chr3 (142-271)||(8110345-8110474)
chr3 (142-270)||(11915764-11915892)
chr3 (146-272)||(23773487-23773613)
chr3 (146-272)||(26098823-26098949)
chr3 (142-271)||(1310959-1311088)
chr3 (146-271)||(43329763-43329888)
chr3 (142-264)||(18539810-18539932)
chr3 (146-271)||(1745488-1745612)
chr3 (151-271)||(10941665-10941785)
chr3 (142-272)||(7623530-7623660)
chr3 (142-272)||(19610344-19610474)
chr3 (142-271)||(9652584-9652713)
chr3 (142-271)||(18104530-18104659)
chr3 (142-255)||(28859597-28859710)
chr3 (144-272)||(8428179-8428307)
chr3 (151-271)||(26390634-26390754)
chr3 (144-271)||(17762650-17762777)
chr3 (144-271)||(19063970-19064097)
chr3 (142-241)||(19545516-19545615)
chr3 (146-272)||(3461309-3461435)
chr3 (142-264)||(4393357-4393479)
chr3 (142-272)||(29956378-29956508)
chr3 (142-272)||(30005533-30005663)
chr3 (142-271)||(11085342-11085471)
chr3 (142-271)||(11219144-11219273)
chr3 (146-271)||(11837214-11837339)
chr3 (146-271)||(21490034-21490159)
chr3 (142-271)||(23217208-23217337)
chr3 (156-264)||(8546265-8546373)
chr3 (142-262)||(29704041-29704161)
chr3 (145-272)||(21020074-21020201)
chr3 (142-272)||(26830440-26830571)
chr3 (142-265)||(28389979-28390102)
chr3 (146-272)||(6088227-6088353)
chr3 (142-271)||(10803726-10803856)
chr3 (146-271)||(15063992-15064117)
chr3 (142-271)||(16299867-16299996)
chr3 (142-271)||(30219344-30219473)
chr3 (146-261)||(50665646-50665761)
chr3 (142-272)||(18380030-18380160)
chr3 (142-272)||(29215998-29216128)
chr3 (142-272)||(31250094-31250224)
chr3 (146-271)||(5565732-5565857)
chr3 (164-272)||(37283551-37283659)
chr3 (142-265)||(1628221-1628344)
chr3 (164-271)||(17269604-17269711)
chr3 (142-241)||(17582331-17582430)
chr3 (142-273)||(36543755-36543886)
chr3 (141-272)||(47263264-47263395)
chr3 (145-271)||(46942496-46942622)
chr3 (142-271)||(8543475-8543603)
chr3 (142-262)||(29451100-29451220)
chr3 (152-271)||(31433753-31433872)
chr3 (151-241)||(6718725-6718815)
chr3 (146-271)||(5744426-5744551)
chr3 (146-271)||(5781385-5781510)
chr3 (146-271)||(46012728-46012853)
chr3 (142-261)||(21088758-21088875)
chr3 (142-265)||(26963255-26963378)
chr3 (142-273)||(36564437-36564568)
chr3 (142-261)||(49915457-49915576)
chr3 (142-270)||(27968921-27969049)
chr3 (176-271)||(20761950-20762045)
chr3 (142-241)||(27212811-27212910)
chr3 (142-271)||(10772053-10772183)
chr3 (173-271)||(6447246-6447344)
chr3 (142-272)||(15490041-15490170)
chr3 (142-271)||(20088406-20088540)
chr3 (142-271)||(20615345-20615472)
chr3 (142-271)||(27182658-27182785)
chr3 (153-272)||(15501550-15501670)
chr3 (146-253)||(27711188-27711293)
chr3 (146-221)||(23233213-23233288)
chr3 (141-191)||(35579605-35579655)
chr3 (154-271)||(13615433-13615550)
chr3 (146-241)||(50240756-50240851)
chr3 (176-260)||(45304374-45304458)
chr3 (237-271)||(23233184-23233218)
chr3 (228-265)||(11386427-11386464)
[»] chr8 (71 HSPs)
chr8 (142-271)||(3823141-3823270)
chr8 (142-272)||(8555303-8555433)
chr8 (141-271)||(11938752-11938881)
chr8 (142-271)||(19240875-19241004)
chr8 (142-271)||(19314059-19314188)
chr8 (140-271)||(19256218-19256349)
chr8 (144-271)||(24576024-24576151)
chr8 (142-272)||(17824615-17824745)
chr8 (146-272)||(32247921-32248047)
chr8 (142-271)||(43431559-43431688)
chr8 (144-271)||(27869248-27869375)
chr8 (142-271)||(4330986-4331115)
chr8 (142-271)||(21350486-21350615)
chr8 (146-271)||(23752286-23752411)
chr8 (142-271)||(30687944-30688073)
chr8 (141-265)||(5670175-5670299)
chr8 (141-271)||(24636659-24636790)
chr8 (141-271)||(25000431-25000561)
chr8 (146-272)||(25273327-25273452)
chr8 (142-271)||(17103865-17103994)
chr8 (146-271)||(19488061-19488186)
chr8 (151-272)||(27910763-27910884)
chr8 (151-272)||(27957182-27957303)
chr8 (144-272)||(17810308-17810436)
chr8 (144-272)||(22939323-22939451)
chr8 (151-271)||(25655858-25655978)
chr8 (144-264)||(33652577-33652697)
chr8 (142-272)||(24193195-24193325)
chr8 (141-271)||(30466954-30467084)
chr8 (151-272)||(16061938-16062059)
chr8 (151-264)||(18010067-18010180)
chr8 (142-272)||(6817062-6817192)
chr8 (146-272)||(8824837-8824963)
chr8 (142-271)||(4647755-4647884)
chr8 (146-271)||(13060931-13061056)
chr8 (142-271)||(32961667-32961796)
chr8 (142-271)||(40289421-40289549)
chr8 (146-272)||(31399507-31399633)
chr8 (144-272)||(29350933-29351062)
chr8 (142-265)||(9915047-9915169)
chr8 (146-271)||(33412977-33413095)
chr8 (146-238)||(19493688-19493781)
chr8 (146-246)||(26399032-26399132)
chr8 (1-84)||(32323108-32323191)
chr8 (142-272)||(29345079-29345209)
chr8 (154-271)||(21219240-21219357)
chr8 (144-271)||(6816383-6816510)
chr8 (142-261)||(37992107-37992226)
chr8 (167-272)||(8789873-8789978)
chr8 (142-263)||(15251610-15251730)
chr8 (154-271)||(9631423-9631541)
chr8 (165-271)||(10917858-10917964)
chr8 (191-272)||(25274654-25274735)
chr8 (142-232)||(5879212-5879302)
chr8 (145-261)||(31344182-31344298)
chr8 (141-271)||(6084246-6084374)
chr8 (185-271)||(42700657-42700743)
chr8 (142-271)||(17003270-17003399)
chr8 (142-271)||(18844544-18844673)
chr8 (146-264)||(14304241-14304359)
chr8 (142-265)||(3692176-3692300)
chr8 (175-242)||(2265407-2265474)
chr8 (171-241)||(15289679-15289749)
chr8 (171-241)||(15470048-15470118)
chr8 (146-241)||(41527730-41527825)
chr8 (176-267)||(35678063-35678154)
chr8 (207-271)||(24479813-24479877)
chr8 (144-195)||(24479874-24479925)
chr8 (224-265)||(6103761-6103802)
chr8 (145-189)||(25651089-25651133)
chr8 (314-346)||(32323249-32323281)
[»] chr6 (84 HSPs)
chr6 (142-271)||(28364921-28365050)
chr6 (142-272)||(9892973-9893103)
chr6 (142-271)||(15364458-15364587)
chr6 (142-271)||(22579349-22579478)
chr6 (142-265)||(25398012-25398135)
chr6 (142-272)||(495626-495756)
chr6 (141-271)||(15448394-15448524)
chr6 (150-270)||(5360427-5360547)
chr6 (144-272)||(6598476-6598604)
chr6 (146-265)||(5192195-5192314)
chr6 (142-271)||(30833960-30834089)
chr6 (144-272)||(26224440-26224568)
chr6 (144-271)||(24661009-24661136)
chr6 (142-271)||(2669319-2669448)
chr6 (142-271)||(21990175-21990303)
chr6 (146-262)||(12499230-12499346)
chr6 (146-262)||(12506559-12506675)
chr6 (146-262)||(12509555-12509671)
chr6 (144-271)||(11049751-11049878)
chr6 (142-272)||(20182155-20182285)
chr6 (142-272)||(22153706-22153836)
chr6 (144-265)||(12200706-12200827)
chr6 (155-271)||(1939242-1939358)
chr6 (144-272)||(2992627-2992755)
chr6 (155-271)||(6978300-6978416)
chr6 (142-253)||(12845013-12845124)
chr6 (142-265)||(21140949-21141072)
chr6 (146-272)||(6605495-6605621)
chr6 (142-271)||(12951718-12951847)
chr6 (146-271)||(15961407-15961532)
chr6 (142-271)||(22083848-22083977)
chr6 (144-271)||(12160847-12160973)
chr6 (144-271)||(26939599-26939726)
chr6 (144-271)||(33250708-33250835)
chr6 (142-264)||(14886571-14886693)
chr6 (142-272)||(16250801-16250931)
chr6 (152-265)||(18492389-18492502)
chr6 (146-265)||(11077663-11077782)
chr6 (142-273)||(18033524-18033654)
chr6 (142-272)||(12351585-12351715)
chr6 (151-273)||(17919555-17919677)
chr6 (144-270)||(27796835-27796961)
chr6 (142-271)||(9060101-9060229)
chr6 (142-255)||(23281796-23281908)
chr6 (146-271)||(28668114-28668239)
chr6 (164-264)||(15509188-15509288)
chr6 (145-272)||(21691494-21691622)
chr6 (142-241)||(343593-343692)
chr6 (146-261)||(14872133-14872248)
chr6 (142-273)||(18048798-18048929)
chr6 (142-241)||(27705432-27705531)
chr6 (146-272)||(20692810-20692936)
chr6 (146-270)||(10458778-10458902)
chr6 (164-271)||(14772693-14772800)
chr6 (142-272)||(9885253-9885383)
chr6 (142-271)||(11530235-11530364)
chr6 (142-243)||(12680212-12680313)
chr6 (151-271)||(12205185-12205305)
chr6 (146-230)||(13145016-13145100)
chr6 (145-261)||(22055622-22055738)
chr6 (171-265)||(12157382-12157476)
chr6 (146-271)||(6065451-6065576)
chr6 (146-225)||(19175823-19175902)
chr6 (146-241)||(33547560-33547655)
chr6 (188-271)||(5250195-5250278)
chr6 (142-227)||(3673177-3673262)
chr6 (146-261)||(11350196-11350308)
chr6 (169-261)||(1954917-1955009)
chr6 (142-271)||(14036630-14036751)
chr6 (151-261)||(10929506-10929617)
chr6 (145-241)||(5270405-5270502)
chr6 (211-272)||(13251378-13251439)
chr6 (142-271)||(16118156-16118285)
chr6 (142-253)||(2396213-2396325)
chr6 (142-261)||(11431649-11431769)
chr6 (188-271)||(8844168-8844252)
chr6 (189-272)||(9878514-9878596)
chr6 (187-270)||(28221647-28221730)
chr6 (183-270)||(28234036-28234123)
chr6 (232-271)||(33191180-33191219)
chr6 (146-261)||(30745729-30745842)
chr6 (205-271)||(7000882-7000949)
chr6 (212-273)||(19175876-19175937)
chr6 (142-194)||(13668071-13668123)
[»] chr1 (78 HSPs)
chr1 (141-271)||(4340416-4340546)
chr1 (141-271)||(41120737-41120867)
chr1 (146-271)||(28229455-28229580)
chr1 (146-271)||(46790014-46790139)
chr1 (141-268)||(46785961-46786088)
chr1 (142-271)||(22603558-22603687)
chr1 (144-272)||(9109974-9110102)
chr1 (144-272)||(12720821-12720949)
chr1 (144-271)||(6459229-6459356)
chr1 (144-271)||(45839304-45839431)
chr1 (142-246)||(41071860-41071964)
chr1 (142-273)||(20408158-20408289)
chr1 (142-272)||(29549428-29549558)
chr1 (142-271)||(14760877-14761006)
chr1 (142-271)||(50845330-50845459)
chr1 (144-271)||(6412053-6412180)
chr1 (142-273)||(9985325-9985456)
chr1 (146-272)||(8940993-8941119)
chr1 (141-271)||(9177109-9177239)
chr1 (142-264)||(9464113-9464235)
chr1 (142-271)||(15243095-15243224)
chr1 (146-271)||(19865258-19865383)
chr1 (144-271)||(41752445-41752572)
chr1 (152-271)||(46339445-46339564)
chr1 (142-272)||(12161824-12161954)
chr1 (142-272)||(18890548-18890678)
chr1 (142-264)||(22158812-22158934)
chr1 (142-271)||(23457907-23458036)
chr1 (142-271)||(38531170-38531299)
chr1 (142-271)||(52183688-52183817)
chr1 (142-272)||(17661060-17661190)
chr1 (145-271)||(19081741-19081867)
chr1 (145-271)||(19129629-19129755)
chr1 (142-272)||(50092297-50092427)
chr1 (142-271)||(17200010-17200139)
chr1 (142-271)||(18894900-18895029)
chr1 (142-271)||(51973434-51973563)
chr1 (142-272)||(13102326-13102456)
chr1 (164-270)||(25787998-25788104)
chr1 (146-238)||(41359001-41359094)
chr1 (152-271)||(7181555-7181674)
chr1 (142-261)||(16913587-16913706)
chr1 (142-241)||(32046886-32046985)
chr1 (142-272)||(12989862-12989992)
chr1 (142-271)||(41063207-41063336)
chr1 (151-272)||(48522537-48522658)
chr1 (142-272)||(7830041-7830171)
chr1 (145-271)||(11917799-11917924)
chr1 (146-272)||(13308819-13308945)
chr1 (142-271)||(46865253-46865382)
chr1 (142-270)||(9259184-9259312)
chr1 (145-271)||(20580922-20581049)
chr1 (145-239)||(13522993-13523087)
chr1 (142-271)||(13195593-13195722)
chr1 (142-255)||(22789607-22789720)
chr1 (145-265)||(26825253-26825373)
chr1 (171-271)||(27253855-27253955)
chr1 (142-261)||(6775897-6776015)
chr1 (142-265)||(20290327-20290449)
chr1 (170-261)||(30928388-30928479)
chr1 (144-241)||(12174796-12174893)
chr1 (142-271)||(12369951-12370070)
chr1 (164-272)||(12806835-12806944)
chr1 (142-271)||(29093554-29093683)
chr1 (142-263)||(18787921-18788039)
chr1 (142-272)||(39748943-39749073)
chr1 (142-261)||(16258496-16258615)
chr1 (146-241)||(9882070-9882162)
chr1 (142-270)||(17733954-17734083)
chr1 (142-205)||(14486698-14486761)
chr1 (151-257)||(45918918-45919024)
chr1 (146-272)||(49881058-49881183)
chr1 (141-241)||(6091286-6091386)
chr1 (142-241)||(25687310-25687409)
chr1 (142-246)||(30673504-30673608)
chr1 (142-241)||(52621164-52621263)
chr1 (224-270)||(25679973-25680019)
chr1 (170-246)||(27864889-27864965)
[»] scaffold0076 (1 HSPs)
scaffold0076 (144-271)||(26495-26622)
[»] chr4 (61 HSPs)
chr4 (142-272)||(19839187-19839317)
chr4 (146-274)||(38645762-38645890)
chr4 (141-271)||(4586758-4586888)
chr4 (142-271)||(55309212-55309342)
chr4 (146-273)||(9670477-9670604)
chr4 (141-271)||(25026564-25026694)
chr4 (142-271)||(5473857-5473986)
chr4 (142-271)||(30268988-30269117)
chr4 (142-271)||(30283072-30283201)
chr4 (142-271)||(32175737-32175866)
chr4 (146-271)||(38619859-38619984)
chr4 (142-271)||(45532579-45532708)
chr4 (141-271)||(13028816-13028946)
chr4 (146-272)||(7111945-7112071)
chr4 (151-272)||(9238624-9238745)
chr4 (142-271)||(13564915-13565044)
chr4 (142-271)||(19680424-19680553)
chr4 (144-271)||(22168278-22168405)
chr4 (142-261)||(25147729-25147848)
chr4 (141-272)||(54539293-54539424)
chr4 (141-271)||(18714909-18715039)
chr4 (146-272)||(29625337-29625463)
chr4 (142-271)||(27040025-27040154)
chr4 (142-271)||(46286229-46286358)
chr4 (144-271)||(2275677-2275805)
chr4 (142-265)||(37378629-37378752)
chr4 (142-264)||(18051847-18051969)
chr4 (142-264)||(30568006-30568128)
chr4 (141-270)||(4627079-4627208)
chr4 (142-271)||(22128312-22128441)
chr4 (146-271)||(30507999-30508124)
chr4 (144-271)||(44783492-44783620)
chr4 (144-271)||(12071972-12072099)
chr4 (142-265)||(38223518-38223641)
chr4 (142-264)||(8878891-8879013)
chr4 (142-272)||(33914067-33914197)
chr4 (142-264)||(36689685-36689807)
chr4 (142-271)||(1638455-1638584)
chr4 (146-241)||(14944758-14944853)
chr4 (146-273)||(42055409-42055536)
chr4 (142-272)||(5399617-5399747)
chr4 (146-264)||(9239288-9239406)
chr4 (152-270)||(24682328-24682446)
chr4 (145-271)||(9913269-9913395)
chr4 (146-272)||(12105995-12106120)
chr4 (151-272)||(9058951-9059072)
chr4 (141-272)||(45091281-45091399)
chr4 (144-241)||(22156631-22156728)
chr4 (142-255)||(34557191-34557304)
chr4 (142-241)||(18744100-18744199)
chr4 (146-271)||(4606829-4606954)
chr4 (142-271)||(16915377-16915506)
chr4 (145-272)||(3613006-3613134)
chr4 (142-270)||(29238431-29238559)
chr4 (142-271)||(30420033-30420162)
chr4 (151-241)||(313604-313694)
chr4 (142-201)||(37761912-37761971)
chr4 (142-264)||(39234950-39235071)
chr4 (146-241)||(6553816-6553911)
chr4 (142-271)||(25225107-25225234)
chr4 (164-272)||(23104378-23104487)
[»] chr2 (55 HSPs)
chr2 (141-271)||(37552232-37552362)
chr2 (141-271)||(12779605-12779735)
chr2 (146-271)||(43408511-43408636)
chr2 (142-272)||(41736178-41736308)
chr2 (142-271)||(13788055-13788184)
chr2 (154-275)||(44476371-44476492)
chr2 (142-270)||(28319580-28319708)
chr2 (145-263)||(13613101-13613219)
chr2 (142-271)||(32008958-32009088)
chr2 (142-264)||(32300457-32300579)
chr2 (146-271)||(7093578-7093703)
chr2 (142-265)||(37723998-37724121)
chr2 (141-271)||(23857958-23858087)
chr2 (142-272)||(41637624-41637754)
chr2 (144-273)||(18551251-18551380)
chr2 (155-272)||(22140363-22140480)
chr2 (144-271)||(28841342-28841469)
chr2 (146-265)||(38362277-38362396)
chr2 (142-264)||(1141542-1141664)
chr2 (142-264)||(15636742-15636864)
chr2 (142-271)||(20065074-20065203)
chr2 (142-273)||(30783344-30783475)
chr2 (142-272)||(21293710-21293840)
chr2 (176-273)||(27039906-27040003)
chr2 (142-271)||(32185838-32185967)
chr2 (142-270)||(23388379-23388507)
chr2 (144-271)||(14757121-14757248)
chr2 (146-277)||(26243315-26243446)
chr2 (142-271)||(8430302-8430431)
chr2 (142-271)||(29749403-29749532)
chr2 (142-271)||(31266360-31266489)
chr2 (142-265)||(28262370-28262493)
chr2 (164-271)||(44722960-44723067)
chr2 (144-271)||(36550844-36550970)
chr2 (142-271)||(27327622-27327751)
chr2 (142-261)||(18916411-18916529)
chr2 (142-272)||(26687689-26687820)
chr2 (142-272)||(37802378-37802507)
chr2 (142-272)||(40018808-40018938)
chr2 (145-261)||(44366007-44366123)
chr2 (164-254)||(35697483-35697573)
chr2 (145-271)||(2556104-2556230)
chr2 (142-272)||(9004307-9004437)
chr2 (142-271)||(18609520-18609649)
chr2 (144-209)||(27523019-27523084)
chr2 (142-245)||(13134646-13134749)
chr2 (142-259)||(8763640-8763757)
chr2 (142-254)||(9590476-9590588)
chr2 (189-272)||(22192232-22192315)
chr2 (142-271)||(36373906-36374033)
chr2 (205-265)||(12860235-12860295)
chr2 (189-272)||(16098916-16098999)
chr2 (151-241)||(31966555-31966644)
chr2 (145-197)||(29998633-29998685)
chr2 (142-180)||(27058407-27058445)
[»] scaffold0576 (1 HSPs)
scaffold0576 (142-271)||(9229-9358)
[»] scaffold0007 (4 HSPs)
scaffold0007 (142-271)||(3752-3881)
scaffold0007 (142-272)||(202784-202914)
scaffold0007 (204-271)||(274665-274732)
scaffold0007 (142-198)||(276207-276263)
[»] scaffold0014 (1 HSPs)
scaffold0014 (141-272)||(22220-22351)
[»] chr5 (61 HSPs)
chr5 (144-271)||(618306-618433)
chr5 (146-272)||(38837670-38837796)
chr5 (141-272)||(26708584-26708715)
chr5 (141-272)||(26978318-26978449)
chr5 (146-264)||(746875-746993)
chr5 (142-271)||(7888807-7888936)
chr5 (146-271)||(10494751-10494876)
chr5 (142-271)||(12045737-12045866)
chr5 (142-271)||(17039631-17039760)
chr5 (141-271)||(24138841-24138971)
chr5 (142-272)||(25652582-25652712)
chr5 (142-271)||(8886851-8886980)
chr5 (154-271)||(16631874-16631991)
chr5 (144-271)||(2472714-2472841)
chr5 (144-271)||(16121839-16121966)
chr5 (144-271)||(35620344-35620470)
chr5 (142-272)||(8108859-8108989)
chr5 (142-271)||(28265475-28265604)
chr5 (142-271)||(36196404-36196533)
chr5 (142-262)||(23975645-23975765)
chr5 (142-271)||(5982655-5982785)
chr5 (142-271)||(23408990-23409120)
chr5 (142-272)||(36831889-36832019)
chr5 (142-271)||(33818561-33818690)
chr5 (146-271)||(40484058-40484183)
chr5 (144-271)||(12328226-12328353)
chr5 (146-272)||(4125187-4125313)
chr5 (142-264)||(15060983-15061105)
chr5 (146-271)||(25397788-25397913)
chr5 (143-271)||(17036412-17036540)
chr5 (146-270)||(17771969-17772093)
chr5 (142-261)||(27428022-27428141)
chr5 (142-272)||(20187940-20188070)
chr5 (142-271)||(36716200-36716329)
chr5 (144-265)||(17986741-17986862)
chr5 (142-271)||(20959518-20959647)
chr5 (142-259)||(23423768-23423885)
chr5 (142-271)||(7003730-7003857)
chr5 (145-271)||(11927786-11927912)
chr5 (142-271)||(13620127-13620256)
chr5 (142-271)||(13974078-13974207)
chr5 (145-256)||(10420267-10420378)
chr5 (146-273)||(36597338-36597465)
chr5 (142-255)||(25673245-25673357)
chr5 (142-243)||(33816786-33816887)
chr5 (142-241)||(17079415-17079514)
chr5 (142-261)||(32726736-32726855)
chr5 (142-272)||(3080695-3080825)
chr5 (168-270)||(33734974-33735076)
chr5 (146-265)||(35778155-35778274)
chr5 (144-271)||(23974576-23974703)
chr5 (142-270)||(16472182-16472310)
chr5 (142-241)||(5043541-5043640)
chr5 (151-228)||(31853131-31853208)
chr5 (185-241)||(9024267-9024323)
chr5 (142-194)||(22649406-22649458)
chr5 (232-271)||(19890986-19891025)
chr5 (142-189)||(29727928-29727975)
chr5 (142-252)||(18413566-18413676)
chr5 (227-271)||(29727895-29727939)
chr5 (226-271)||(16464723-16464768)
[»] scaffold0603 (1 HSPs)
scaffold0603 (142-271)||(5979-6108)
[»] scaffold0128 (1 HSPs)
scaffold0128 (141-265)||(10669-10793)
[»] scaffold0240 (1 HSPs)
scaffold0240 (140-271)||(14990-15121)
[»] scaffold0599 (1 HSPs)
scaffold0599 (142-270)||(7515-7643)
[»] scaffold0219 (1 HSPs)
scaffold0219 (144-271)||(19615-19742)
[»] scaffold0006 (2 HSPs)
scaffold0006 (146-265)||(84680-84799)
scaffold0006 (145-271)||(120987-121113)
[»] scaffold0062 (1 HSPs)
scaffold0062 (142-271)||(43927-44056)
[»] scaffold0001 (3 HSPs)
scaffold0001 (144-265)||(8116-8237)
scaffold0001 (144-265)||(21848-21969)
scaffold0001 (142-271)||(84313-84442)
[»] scaffold0009 (3 HSPs)
scaffold0009 (146-270)||(182544-182668)
scaffold0009 (144-271)||(219648-219775)
scaffold0009 (146-271)||(215663-215781)
[»] scaffold0108 (1 HSPs)
scaffold0108 (142-263)||(12663-12783)
[»] scaffold0019 (1 HSPs)
scaffold0019 (144-274)||(173456-173587)
[»] scaffold0717 (1 HSPs)
scaffold0717 (144-271)||(918-1046)
[»] scaffold0087 (1 HSPs)
scaffold0087 (142-272)||(37786-37916)
[»] scaffold0047 (1 HSPs)
scaffold0047 (142-272)||(58592-58722)
[»] scaffold0002 (1 HSPs)
scaffold0002 (146-271)||(439977-440102)
[»] scaffold0023 (1 HSPs)
scaffold0023 (151-271)||(39703-39823)
[»] scaffold0069 (1 HSPs)
scaffold0069 (142-261)||(10168-10287)
[»] scaffold0058 (1 HSPs)
scaffold0058 (142-271)||(74541-74670)
[»] scaffold0184 (1 HSPs)
scaffold0184 (142-265)||(7466-7589)
[»] scaffold0035 (1 HSPs)
scaffold0035 (144-265)||(74723-74845)
[»] scaffold0655 (1 HSPs)
scaffold0655 (151-271)||(3162-3282)
[»] scaffold0161 (1 HSPs)
scaffold0161 (142-265)||(6805-6928)
[»] scaffold0011 (1 HSPs)
scaffold0011 (183-271)||(17617-17705)
[»] scaffold0502 (1 HSPs)
scaffold0502 (142-272)||(10902-11032)
[»] scaffold0554 (1 HSPs)
scaffold0554 (204-271)||(9882-9949)
[»] scaffold0284 (1 HSPs)
scaffold0284 (146-241)||(1549-1644)
[»] scaffold0114 (1 HSPs)
scaffold0114 (146-241)||(36316-36411)
[»] scaffold0038 (2 HSPs)
scaffold0038 (187-270)||(22145-22228)
scaffold0038 (183-270)||(34197-34284)
[»] scaffold0024 (1 HSPs)
scaffold0024 (142-202)||(112338-112398)
[»] scaffold0211 (1 HSPs)
scaffold0211 (146-241)||(19168-19263)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 9e-61; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 31425640 - 31425510
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31425640 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgtgaggaatttcattttttccgtcactaattt 31425541  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||||||||||    
T  31425540 ccctcgctaattttgctttttctaatagtga 31425510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 21917461 - 21917333
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21917461 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 21917362  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    ||| |||||||||||||||||| ||||||    
T  21917361 ctcactaattttgctttttctagtagtga 21917333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 23232051 - 23232179
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23232051 atttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 23232150  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    |||||||||||||||||||||| ||||||    
T  23232151 ctctctaattttgctttttctagtagtga 23232179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 18217839 - 18217969
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18217839 aaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 18217938  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  18217939 ccctcgctaattttgctttttctagtagtga 18217969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 22486404 - 22486534
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22486404 aaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 22486503  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  22486504 ccctcgctaattttgctttttctagtagtga 22486534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 1842904 - 1843033
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1842904 aaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 1843003  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    |||||  ||||||||||||||||| |||||    
T  1843004 ccctcgttaattttgctttttctagtagtg 1843033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 3872312 - 3872186
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3872312 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 3872213  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | |||||||||||||||||| ||||||    
T  3872212 cgctaattttgctttttctagtagtga 3872186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 3904603 - 3904478
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||    
T  3904603 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatttccct 3904504  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||||||| |||||    
T  3904503 cgctaattttgctttttctagtagtg 3904478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 24605848 - 24605977
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24605848 aaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 24605947  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| || ||||| ||||||||| |||||    
T  24605948 ccctcgctgatttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 21623030 - 21623160
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  21623030 taaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaatt 21623129  T
Q  241 tccctctctaattttgctttttctaatagtga 272  Q
    |||||| || ||||||||||||||| ||||||    
T  21623130 tccctcgct-attttgctttttctagtagtga 21623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 47523777 - 47523650
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47523777 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 47523678  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| ||||||||  |||||||| |||||    
T  47523677 ctcgctaattttattttttctagtagtg 47523650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 6849340 - 6849210
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  6849340 aaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccgtcactaattt 6849241  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  6849240 ccctcgctaattttgctttttctagtagtga 6849210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 23750865 - 23750735
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  23750865 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccgtcactaattt 23750766  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| ||||||||| |||||||| ||||||    
T  23750765 ccctcgctaattttgttttttctagtagtga 23750735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 27806030 - 27806158
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |    
T  27806030 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaattttc 27806129  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    ||| |||||||||||||||||| ||||||    
T  27806130 ctcgctaattttgctttttctagtagtga 27806158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 28800890 - 28801017
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  28800890 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttctgtcactaatttcc 28800989  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||||||||||||||| |||||    
T  28800990 ctcgctaattttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 23577318 - 23577188
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23577318 aaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 23577219  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    | ||| || ||||| ||||||||| ||||||    
T  23577218 ctctcgctgatttttctttttctagtagtga 23577188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 9698667 - 9698538
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||| |||||||||| |||||||||| ||||||||||||||||    
T  9698667 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcactaattt 9698568  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  9698567 ccctcgctaattttgctttttctagtagtg 9698538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 11036517 - 11036646
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  11036517 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 11036616  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||  |||||||||||||||||| |||||    
T  11036617 cccttgctaattttgctttttctagtagtg 11036646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 14786764 - 14786635
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  14786764 aaatttaacgagggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcactaattt 14786665  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| ||||||||| ||||||||||||||    
T  14786664 tcctcactaattttgttttttctaatagtg 14786635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 151 - 271
Target Start/End: Complemental strand, 2650948 - 2650828
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||||||| |||    
T  2650948 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcacta 2650849  T
Q  251 attttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||||    
T  2650848 atttttctttttctagtagtg 2650828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 7733439 - 7733311
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||| ||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7733439 atttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 7733340  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    ||| ||||||| |||||||||| ||||||    
T  7733339 ctcgctaatttcgctttttctagtagtga 7733311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 20174030 - 20174149
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  20174030 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 20174129  T
Q  242 ccctctctaattttgctttt 261  Q
    ||||| ||||||||||||||    
T  20174130 ccctcgctaattttgctttt 20174149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 23539251 - 23539372
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  23539251 gagggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 23539350  T
Q  251 attttgctttttctaatagtga 272  Q
    ||||||||||||||| ||||||    
T  23539351 attttgctttttctagtagtga 23539372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 37135414 - 37135285
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||||||    
T  37135414 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatttcattttttccgtcactaattt 37135315  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||||||| |||||    
T  37135314 ccctcactaattttgttttttctagtagtg 37135285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 39979753 - 39979624
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||||||| |||||    
T  39979753 aaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 39979654  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||| |||||||||    
T  39979653 ccctccctaattttgcttttcctaatagtg 39979624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 10050965 - 10050866
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  10050965 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattt 10050866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 15014532 - 15014405
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||| |||||||    
T  15014532 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcaccaatttcc 15014433  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||||| ||||||||| |||||    
T  15014432 ctcgctaattttactttttctagtagtg 15014405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 156 - 271
Target Start/End: Original strand, 48933160 - 48933275
Alignment:
Q  156 aaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaatttt 255  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  48933160 aaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcactaattttcctcgctaatttt 48933259  T
Q  256 gctttttctaatagtg 271  Q
    ||||||||||||||||    
T  48933260 gctttttctaatagtg 48933275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 1907365 - 1907495
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| ||| |||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  1907365 aaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcactaattt 1907464  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||| ||| ||||||    
T  1907465 ccctcgctaattttgcttttcctagtagtga 1907495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 20429475 - 20429604
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||||||||||    
T  20429475 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 20429574  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||   ||||||||||||||||| |||||    
T  20429575 cccttgttaattttgctttttctagtagtg 20429604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 40847564 - 40847435
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||||    
T  40847564 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaattt 40847465  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||| ||||| ||| |||||    
T  40847464 ccctccctaattttacttttcctagtagtg 40847435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 816320 - 816190
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  |||||||||||||||||||    
T  816320 aaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagattttgttttttccgtcactaattt 816221  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||| |||| |||||| | ||||||    
T  816220 ccctccctaaatttgttttttccagtagtga 816190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 23699954 - 23699825
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||||||||| || |||||||||| |||||| ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  23699954 aaattttgtgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 23699855  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||| ||||||||| |||||    
T  23699854 ccctcgctaatttttctttttctagtagtg 23699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 33427704 - 33427828
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  33427704 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcatttttt-ggtcactaatttccct 33427802  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | ||||||||| |||||||| |||||    
T  33427803 cgctaattttgttttttctagtagtg 33427828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 38057642 - 38057771
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  38057642 aaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgaggaattttattttttccatcactaattt 38057741  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     ||||  | |||||||||||| || |||||    
T  38057742 tcctcgttgattttgctttttgtagtagtg 38057771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 36636516 - 36636628
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||    
T  36636516 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 36636615  T
Q  242 ccctctctaattt 254  Q
    ||||| |||||||    
T  36636616 ccctccctaattt 36636628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 45664778 - 45664877
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||    
T  45664778 aaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttctgtcactaattt 45664877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 4514779 - 4514904
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||||||||    
T  4514779 ttagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtcacaaatttccct 4514878  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||| ||| |||||    
T  4514879 ccctaattttgcttttcctagtagtg 4514904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 15969796 - 15969925
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatttc 242  Q
    |||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||    
T  15969796 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagaaatttcatttttttccgtcactaatatc 15969895  T
Q  243 cctctctaattttgctttttctaatagtga 272  Q
    ||||  ||||||| ||||||||| ||||||    
T  15969896 cctcattaattttactttttctagtagtga 15969925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 274
Target Start/End: Original strand, 21871582 - 21871710
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| ||||||||    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||| ||||    
T  21871582 aaatttagtgagggaaaatgtaaaatc----tctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgccactgattt 21871677  T
Q  242 ccctctctaattttgctttttctaatagtgaga 274  Q
     |||| ||||||||| |||||||| ||||||||    
T  21871678 tcctcgctaattttgttttttctagtagtgaga 21871710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 2093487 - 2093361
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||   ||| |||||||||||||||||||||||||||||||||||    
T  2093487 ttagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatttccct 2093388  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | || ||||| ||||||||| ||||||    
T  2093387 cgctgatttttctttttctagtagtga 2093361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 31042264 - 31042374
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||||||| | |||||||| ||    
T  31042264 tttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttattttttccataactaattttcc 31042363  T
Q  245 tctctaatttt 255  Q
    |||||||||||    
T  31042364 tctctaatttt 31042374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 1824325 - 1824200
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||  | |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||| || ||||||||||| |||||||||    
T  1824325 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttccct 1824226  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||| ||| |||||    
T  1824225 ccctaattttgcttttcctagtagtg 1824200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 142 - 270
Target Start/End: Original strand, 24140460 - 24140588
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| |||||||| |||| |||||||||| |||||||| ||||||||||||||||||||||||| || ||||||||||| |||||    
T  24140460 aaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgaggaattttatattttccgtcacaaattt 24140559  T
Q  242 ccctctctaattttgctttttctaatagt 270  Q
     |||| |||||||| ||||| ||| ||||    
T  24140560 tcctccctaattttacttttcctagtagt 24140588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 42926547 - 42926419
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatt-ttttccgtcactaatttc 242  Q
    |||||| |||| ||||| | |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| |||||||||||||||||     
T  42926547 atttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcatttttttccgtcactaatttt 42926448  T
Q  243 cctctctaattttgctttttctaatagtg 271  Q
    |||| ||||||||  |||||||| |||||    
T  42926447 cctcgctaattttattttttctagtagtg 42926419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 26577279 - 26577394
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| | |||||||    
T  26577279 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtttccct 26577378  T
Q  246 ctctaattttgctttt 261  Q
      ||||||||||||||    
T  26577379 tcctaattttgctttt 26577394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 32267357 - 32267479
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| |||  ||||||||||| |||| | |||||||||||||||| |    
T  32267357 aaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggatttta-tttttccgtcactaatct 32267455  T
Q  242 ccctctctaattttgctttttcta 265  Q
    ||||| |||||||||| |||||||    
T  32267456 ccctccctaattttgcattttcta 32267479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 11852021 - 11852138
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||| | |||||| ||||||||||||||||||||||||| ||||||||||||||||||  |||| |||||||| ||||| |||||| |    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtcacaaatttctc 11852120  T
Q  245 tctctaattttgcttttt 262  Q
    || |||||||||||||||    
T  11852121 tccctaattttgcttttt 11852138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 263
Target Start/End: Original strand, 22501604 - 22501725
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||   |||| ||||||||||||||||||||    
T  22501604 aaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttattttttccgtcactaattt 22501703  T
Q  242 ccctctctaattttgctttttc 263  Q
     | ||  ||||||||| |||||    
T  22501704 tcatccttaattttgccttttc 22501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 26415437 - 26415554
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||| |||||||||||||||||| ||||| |||||||||||||| ||| |||| |||||||||| ||||| ||||||||| ||||||||||||     
T  26415437 tttagagaggaaaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgagaaattttattttttccatcactaatttcct 26415536  T
Q  245 tctctaattttgcttttt 262  Q
    ||||||||||| ||||||    
T  26415537 tctctaattttacttttt 26415554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 2457680 - 2457797
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||| | ||||||||||| |||||||||||||||||||||||| ||||||||||||||  |||| || ||||| |||||||||||    
T  2457680 aaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttgtgag--attttatattttctgtcactaattt 2457777  T
Q  242 ccctctctaattttgctttt 261  Q
    ||||| ||||||||||||||    
T  2457778 ccctccctaattttgctttt 2457797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 20924087 - 20923958
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||| |||||||||||||| ||||||  ||||||| ||  |||| ||||||||| ||||||||||    
T  20924087 aaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttattttttccatcactaattt 20923988  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    |||||  ||||||| ||||||||| |||||    
T  20923987 ccctccataattttactttttctagtagtg 20923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 27304895 - 27304999
Alignment:
Q  157 aaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttg 256  Q
    |||||| | |||||||||||||||||||||||||||||||| |||| ||||||||| || |||| |||||||| |||||||||||||||| |||||||||    
T  27304895 aaacgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctgtcactaatttccctccctaattttg 27304994  T
Q  257 ctttt 261  Q
     ||||    
T  27304995 ttttt 27304999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 36993830 - 36993959
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||| | ||||| || |||||||||||||||||||||| |||| ||  |||||||||||||||| || |||||| |||| |||||    
T  36993830 aaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaattttatattttccatcacaaattt 36993929  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||| ||| |||||    
T  36993930 ccctccctaattttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 10222758 - 10222629
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||  |||||||||||||||||||||||||| |||| |||||||||||| |||| ||||| |||| ||||| | |||||| |||||||||||    
T  10222758 aaatttagagaaagaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaaa-aatttatgagaaattttactttttctgtcactaattt 10222660  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
     |||| |||||| || |||||||| ||||||    
T  10222659 tcctccctaattatgttttttctagtagtga 10222629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 27130344 - 27130471
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| || ||||||||||  |||||||||||||| ||||||||  || |||||||||||| |||| || |||||| ||||| ||||    
T  27130344 aaatttagagagggaaaatgtgaaatccctct--aattccgtcactaacttttgcgattaacgaatttgtgaggcattttatattttccatcactgattt 27130441  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    | ||||| |||||||||||||||| |||||    
T  27130442 ctctctcgaattttgctttttctagtagtg 27130471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 275
Target Start/End: Complemental strand, 25777241 - 25777108
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||| |||||||||| | |||||||||||| ||| |||| ||||||||||| |||| ||||| |  |||||||||||    
T  25777241 aaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttattttattggtcactaattt 25777142  T
Q  242 ccctctctaattttgctttttctaatagtgagaa 275  Q
     | || |||||||| | ||||||| |||||||||    
T  25777141 tcttccctaattttaccttttctagtagtgagaa 25777108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 27132822 - 27132722
Alignment:
Q  170 ctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatag 269  Q
    ||||||||||| ||||||||||||||| || ||  ||||||||| | |||| ||||||||||| || ||||||||||||||||||| ||||||||| |||    
T  27132822 ctctctaattctgtcactaaattttgcaacaaacaaatttgtgatggattttattttttccgttaccaatttccctctctaattttactttttctagtag 27132723  T
Q  270 t 270  Q
    |    
T  27132722 t 27132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 11890276 - 11890177
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||  | | ||||||| |||| | ||||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  11890276 aaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattttattttttccgtcactaattt 11890177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 687887 - 688005
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| ||||||||| |||||||||| ||||||||| |||||||| ||           ||||||| ||||||| ||||| | ||||    
T  687887 aaatttagtgagggaaaatgtaaaatccttctctaattctgtcactaaactttgcgacaaa-----------ggaattttatttttttcgtcattgattt 687975  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  687976 ccctcgctaattttgctttttctagtagtg 688005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 1822118 - 1822006
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||| ||||| | ||||| |||||||||||| ||| ||||||||  || | | ||||||||||||||||| || ||||||||||||||||   ||    
T  1822118 ttagtgaggaaaaacatgaaatctctctctaattccttcagtaaattttaagatcgaggaatttgtgaggaattttatattttccgtcactaatt---ct 1822022  T
Q  246 ctctaattttgctttt 261  Q
    | ||||||||||||||    
T  1822021 ccctaattttgctttt 1822006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 164 - 261
Target Start/End: Complemental strand, 1841889 - 1841793
Alignment:
Q  164 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttt 261  Q
    |||||||||||||||||| ||| |||||||||| | ||| |||||||||||| |||| ||||||| | | ||||||||| ||  ||||||||||||||    
T  1841889 aaatccctctctaattccttcagtaaattttgcaatcaaggaatttgtgagggattttatttttt-cttaactaatttctcttcctaattttgctttt 1841793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 15330306 - 15330247
Alignment:
Q  170 ctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttc 229  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||| ||||||    
T  15330306 ctctctaattctgtcactaaattttgcgaccaagaaatttgtgagaaatttcaatttttc 15330247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 5106861 - 5106740
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||| ||||||  |||||||||| |||||| |||||||  ||    | ||||| ||||| ||||| ||||||| |||||||||||    
T  5106861 aaatttagagaggcaaaacataaaatttctctctaatttcgtcacgaaattttatgatgggaaaatttatgagggatttc-ttttttctgtcactaattt 5106763  T
Q  242 ccctctctaattttgctttttct 264  Q
    ||||  |||||||||||||||||    
T  5106762 cccttactaattttgctttttct 5106740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 38090336 - 38090402
Alignment:
Q  205 aatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    ||||||||||| |||| |||||||||||||| |||||||||| ||||||||||| || ||| |||||    
T  38090336 aatttgtgagggattttattttttccgtcacaaatttccctccctaattttgctattcctagtagtg 38090402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 8116516 - 8116599
Alignment:
Q  178 ttccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttt 261  Q
    |||| ||||||||||||| ||| | | | |||||||||||||| |||||||  ||||||||||| || |||||||||| |||||    
T  8116516 ttccatcactaaattttgtgacgagaaagtttgtgaggaattttattttttttgtcactaattttccgctctaatttttctttt 8116599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 7740717 - 7740672
Alignment:
Q  226 tttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    ||||||||| |||||| ||||| ||||||||||||| |||||||||    
T  7740717 tttccgtcattaattttcctctttaattttgcttttcctaatagtg 7740672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 5235452 - 5235420
Alignment:
Q  159 acgtaaaatccctctctaattccgtcactaaat 191  Q
    |||| ||||||||||||||||||||||||||||    
T  5235452 acgtgaaatccctctctaattccgtcactaaat 5235420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 30908992 - 30908944
Alignment:
Q  224 tttttccgtcactaatttccctctctaattttgctttttctaatagtga 272  Q
    ||||| ||||||||||||  |||||||||||||||||| ||| ||||||    
T  30908992 ttttttcgtcactaatttttctctctaattttgcttttcctagtagtga 30908944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 9e-61; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 27449094 - 27449224
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449094 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 27449193  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  27449194 ccctcgctaattttgctttttctagtagtga 27449224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 48404865 - 48404996
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48404865 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 48404964  T
Q  241 tccctctctaattttgctttttctaatagtga 272  Q
    |||||| |||||||||||||||||| ||||||    
T  48404965 tccctcgctaattttgctttttctagtagtga 48404996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 19269993 - 19269864
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19269993 aaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 19269894  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||||||||||||||||||    
T  19269893 ccctcgctaattttgctttttctaatagtg 19269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 5260943 - 5261073
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5260943 aaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 5261042  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  5261043 ccctcactaattttgctttttctagtagtga 5261073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 13921331 - 13921460
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13921331 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 13921430  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| |||||||||||||||||| |||||    
T  13921431 tcctcgctaattttgctttttctagtagtg 13921460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 25882578 - 25882705
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25882578 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 25882677  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| ||||||||||||||||||||||||    
T  25882678 ctcgctaattttgctttttctaatagtg 25882705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 29236049 - 29236180
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||||||||    
T  29236049 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaattttgtgagaaatttcattttttccgtcactaatt 29236148  T
Q  241 tccctctctaattttgctttttctaatagtga 272  Q
    |||||| |||||||||||||||||||||||||    
T  29236149 tccctcgctaattttgctttttctaatagtga 29236180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 21816726 - 21816856
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21816726 taaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 21816825  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||| ||||||||| |||||    
T  21816826 tccctcgctaatttttctttttctagtagtg 21816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 13905163 - 13905038
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||    
T  13905163 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcgct 13905064  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    |||||||||||||||||||| |||||    
T  13905063 ctctaattttgctttttctagtagtg 13905038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 18091674 - 18091547
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18091674 atttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttcc 18091575  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| ||||||||||||||| || |||||    
T  18091574 ctcgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 11007812 - 11007682
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  11007812 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcattttttccgtcactaattt 11007713  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||  |||||||||||||||||| ||||||    
T  11007712 cccttactaattttgctttttctagtagtga 11007682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 19223455 - 19223585
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||    
T  19223455 aaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcaccaattt 19223554  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  19223555 ccctcgctaattttgctttttctagtagtga 19223585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 8110345 - 8110474
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  8110345 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 8110444  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  8110445 ccctcactaattttgctttttctagtagtg 8110474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 142 - 270
Target Start/End: Original strand, 11915764 - 11915892
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||    
T  11915764 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcactaattt 11915863  T
Q  242 ccctctctaattttgctttttctaatagt 270  Q
    ||||| |||||||||||||||||| ||||    
T  11915864 ccctcgctaattttgctttttctagtagt 11915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 23773487 - 23773613
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  23773487 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatttccct 23773586  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
      ||||||||| |||||||| ||||||    
T  23773587 tactaattttgttttttctagtagtga 23773613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 26098823 - 26098949
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  26098823 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatttccct 26098922  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | |||||||||||||||||| ||||||    
T  26098923 cgctaattttgctttttctagtagtga 26098949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 1311088 - 1310959
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  1311088 aaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggattttcattttttccgtcactaattt 1310989  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||  |||||||||||||||||| |||||    
T  1310988 tccttgctaattttgctttttctagtagtg 1310959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 43329888 - 43329763
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43329888 ttagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 43329789  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||||||| |||||    
T  43329788 cgctaattttgctttttctagtagtg 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 18539810 - 18539932
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||||||||    
T  18539810 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttttgaggaatttcattttttccgtcactaattt 18539909  T
Q  242 ccctctctaattttgctttttct 264  Q
    |||||||||||||||||||||||    
T  18539910 ccctctctaattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 1745612 - 1745488
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  1745612 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-ttttccgtcactaatttccct 1745514  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | ||||||||||||||| || |||||    
T  1745513 cgctaattttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 151 - 271
Target Start/End: Complemental strand, 10941785 - 10941665
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||    
T  10941785 gagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttacta 10941686  T
Q  251 attttgctttttctaatagtg 271  Q
    ||||||||||||||| |||||    
T  10941685 attttgctttttctagtagtg 10941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 7623660 - 7623530
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  7623660 aaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatctgtgagaaatttcattttttccgtcactaattt 7623561  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| || ||||| ||||||||| ||||||    
T  7623560 ccctcgctgatttttctttttctagtagtga 7623530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 19610344 - 19610474
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||    
T  19610344 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 19610443  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||| ||| ||||||    
T  19610444 ccctccctaattttgcttttcctagtagtga 19610474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 9652584 - 9652713
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||    
T  9652584 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcactaattt 9652683  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| | |||||||||||||||| |||||    
T  9652684 ccctcgccaattttgctttttctagtagtg 9652713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 18104659 - 18104530
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||    
T  18104659 aaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaattttttccgtcaataattt 18104560  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  18104559 ccctcgctaattttgctttttctagtagtg 18104530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 28859597 - 28859710
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  28859597 aaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaattt 28859696  T
Q  242 ccctctctaatttt 255  Q
     |||| ||||||||    
T  28859697 tcctcgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 8428179 - 8428307
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8428179 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 8428278  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    ||| ||||||||  |||||||| ||||||    
T  8428279 ctcgctaattttattttttctagtagtga 8428307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 151 - 271
Target Start/End: Complemental strand, 26390754 - 26390634
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||| ||| | |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| |||    
T  26390754 gagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttctctcgcta 26390655  T
Q  251 attttgctttttctaatagtg 271  Q
    ||||||||||||||| |||||    
T  26390654 attttgctttttctagtagtg 26390634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 17762650 - 17762777
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  17762650 atttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 17762749  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| ||||||||| | |||||| |||||    
T  17762750 ctcgctaattttgttctttctagtagtg 17762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 19063970 - 19064097
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  19063970 atttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 19064069  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| ||||||||| | |||||| |||||    
T  19064070 ctcgctaattttgttctttctagtagtg 19064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 19545516 - 19545615
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19545516 aaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 19545615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 3461435 - 3461309
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||  |||||||||||||||| |||||||| ||||||||||||| |    
T  3461435 ttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatttcctt 3461336  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | |||||||||||||||||| ||||||    
T  3461335 cgctaattttgctttttctagtagtga 3461309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 4393479 - 4393357
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||    
T  4393479 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtcactaattt 4393380  T
Q  242 ccctctctaattttgctttttct 264  Q
    ||||| |||||||||||||||||    
T  4393379 ccctcactaattttgctttttct 4393357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 29956378 - 29956508
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||||||||| || |||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  29956378 aaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcactaattt 29956477  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||| ||||||||| ||||||    
T  29956478 ccctcgctaattttactttttctagtagtga 29956508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 30005533 - 30005663
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||||||||| || |||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  30005533 aaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcactaattt 30005632  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||| ||||||||| ||||||    
T  30005633 ccctcgctaattttactttttctagtagtga 30005663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 11085471 - 11085342
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||  || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  11085471 aaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatttcattttttccgttactgattt 11085372  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    | ||| |||||||| ||||||||| |||||    
T  11085371 ctctcgctaattttactttttctagtagtg 11085342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 11219144 - 11219273
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||||||||||||| ||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||    
T  11219144 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttccgtcactaattt 11219243  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||||||| |||||    
T  11219244 ccctcgctaattttgttttttctagtagtg 11219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 11837339 - 11837214
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  11837339 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccatcacgaatttccct 11837240  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | ||||||||| |||||||| |||||    
T  11837239 cgctaattttgttttttctagtagtg 11837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 21490159 - 21490034
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||    
T  21490159 ttagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcattgatttccct 21490060  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | ||||||||| |||||||| |||||    
T  21490059 cactaattttgttttttctagtagtg 21490034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 23217337 - 23217208
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||| ||||||    
T  23217337 aaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgaggaatttgattttttccctcattaattt 23217238  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||| |||||| || |||||    
T  23217237 ccctccctaatttttctttttttagtagtg 23217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 264
Target Start/End: Original strand, 8546265 - 8546373
Alignment:
Q  156 aaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaatttt 255  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  256 gctttttct 264  Q
    |||||||||    
T  8546365 gctttttct 8546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 29704161 - 29704041
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||| |||||||| |||||||||| |||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||    
T  29704161 aaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgaggaatttcattttttccgtcactaattt 29704062  T
Q  242 ccctctctaattttgcttttt 262  Q
    ||||| |||||||||||||||    
T  29704061 ccctcgctaattttgcttttt 29704041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 145 - 272
Target Start/End: Original strand, 21020074 - 21020201
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||  |||| |||||||||||||||||||||||    
T  21020074 tttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttattttttccgtcactaatttccc 21020173  T
Q  245 tctctaattttgctttttctaatagtga 272  Q
    || |||||||||||||| ||| ||||||    
T  21020174 tccctaattttgcttttcctagtagtga 21020201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 26830571 - 26830440
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatt 240  Q
    |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| | |||||||||||| |||||    
T  26830571 aaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgaggaattttatttttttccgtcattaatt 26830472  T
Q  241 tccctctctaattttgctttttctaatagtga 272  Q
    | |||| |||||||| ||||||||||||||||    
T  26830471 ttcctccctaatttttctttttctaatagtga 26830440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 28389979 - 28390102
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||||||||||    
T  28389979 aaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaattt 28390078  T
Q  242 ccctctctaattttgctttttcta 265  Q
     ||||||| ||||| |||||||||    
T  28390079 tcctctctgattttactttttcta 28390102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 6088353 - 6088227
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||    
T  6088353 ttagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtcactaatttccct 6088254  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
      || ||||||||||||||| ||||||    
T  6088253 tacttattttgctttttctagtagtga 6088227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 10803726 - 10803856
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatt 240  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||| |||||    
T  10803726 aaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgaggaatttcatttttttccgtcattaatt 10803825  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| ||||||| |||||||||| |||||    
T  10803826 tccctccctaatttggctttttctagtagtg 10803856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 15064117 - 15063992
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||    
T  15064117 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 15064018  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||| ||| |||||    
T  15064017 ccctaattttgcttttcctagtagtg 15063992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 16299867 - 16299996
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||    
T  16299867 aaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 16299966  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    | ||| |||||||||||||| ||| |||||    
T  16299967 cgctccctaattttgcttttcctagtagtg 16299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 30219344 - 30219473
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||| | |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||||| |||||    
T  30219344 aaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtcacaaattt 30219443  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||| ||| |||||    
T  30219444 ccctccctaattttgcttttcctagtagtg 30219473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 50665761 - 50665646
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||||||||  |||||||||    
T  50665761 ttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataaatttccct 50665662  T
Q  246 ctctaattttgctttt 261  Q
    ||||||||||||||||    
T  50665661 ctctaattttgctttt 50665646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 18380030 - 18380160
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||  ||||||||| ||||||||||||| |||||||||||||||||||| ||| |||  ||||||||| |||||||||||||||||||||| ||||    
T  18380030 aaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatttcattttttccgtcactgattt 18380129  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||| ||||||||| ||||||    
T  18380130 ccctcgctaattttactttttctagtagtga 18380160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 29215998 - 29216128
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||    
T  29215998 aaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 29216097  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
     ||||  ||||||||||||| ||| ||||||    
T  29216098 tcctccataattttgcttttcctagtagtga 29216128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 31250094 - 31250224
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||  ||||||| |||||||| |||||||||||||||||| |    
T  31250094 aaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaattttattttttccgtcactaatct 31250193  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
     |||| |||||||||| ||||||| ||||||    
T  31250194 tcctccctaattttgcattttctagtagtga 31250224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 5565732 - 5565857
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||| ||||||||||||||||  |||||||||||||||||||||  ||||||||||  |||| ||||||||||||||||||||||||    
T  5565732 ttagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatttccct 5565831  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | || ||||||||||||||| |||||    
T  5565832 ccctgattttgctttttctagtagtg 5565857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 272
Target Start/End: Original strand, 37283551 - 37283659
Alignment:
Q  164 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttc 263  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||||||||| || ||||||||||| |||||||||| |||||||||||||| |    
T  37283551 aaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcc 37283650  T
Q  264 taatagtga 272  Q
    |||||||||    
T  37283651 taatagtga 37283659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 1628221 - 1628344
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| |||||||||||||||| |||||||||||||| |||| || |||||| |||||||||| ||||||||| ||| ||||||    
T  1628221 aaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgaggaattttattttttccatcattaattt 1628320  T
Q  242 ccctctctaattttgctttttcta 265  Q
    ||||| |||||||| |||||||||    
T  1628321 ccctccctaattttactttttcta 1628344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 17269711 - 17269604
Alignment:
Q  164 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttc 263  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||  |||||||| || ||||||||||||||||    
T  17269711 aaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttccatcgttaatttccatcgctaattttgctttttc 17269612  T
Q  264 taatagtg 271  Q
    || |||||    
T  17269611 tagtagtg 17269604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 17582430 - 17582331
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  17582430 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcactaattt 17582331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 36543755 - 36543886
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||| ||||||||| ||||||||||    
T  36543755 aaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagattttattttttccatcactaattt 36543854  T
Q  242 ccctctctaattttgctttttctaatagtgag 273  Q
     |||| |||||||| ||||||||| |||||||    
T  36543855 tcctccctaatttttctttttctagtagtgag 36543886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 141 - 272
Target Start/End: Complemental strand, 47263395 - 47263264
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||||||  || ||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  47263395 taaatttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaatt 47263296  T
Q  241 tccctctctaattttgctttttctaatagtga 272  Q
    ||| ||  ||||||||||||||||| ||||||    
T  47263295 tccttcgttaattttgctttttctagtagtga 47263264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 271
Target Start/End: Original strand, 46942496 - 46942622
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||  || |||||||| |||| |||||||| |||||||||||||     
T  46942496 tttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttctgtcactaatttcct 46942595  T
Q  245 tctctaattttgctttttctaatagtg 271  Q
    || ||||||||| |||||||| |||||    
T  46942596 tccctaattttgatttttctagtagtg 46942622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 8543475 - 8543603
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||||   || |||| |||||||||| ||||||| ||||||||||    
T  8543475 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgaccatgaaacttgttaggaatttca-tttttccatcactaattt 8543573  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||| ||||||||||||||    
T  8543574 ccctcgctaattttgttttttctaatagtg 8543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 29451100 - 29451220
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||||||||||||||| | ||||||||| ||  | |||||| |||| ||||||||||||||||||||||||||    
T  29451100 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaatttatgagaaatttcattttttccgtcactaattt 29451199  T
Q  242 ccctctctaattttgcttttt 262  Q
    |||||  |||||||| |||||    
T  29451200 ccctcgttaattttgtttttt 29451220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 152 - 271
Target Start/End: Original strand, 31433753 - 31433872
Alignment:
Q  152 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaa 251  Q
    ||||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||| ||||||||  |||||||||||||| |||||    
T  31433753 agggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttattttttctatcactaatttccctatctaa 31433852  T
Q  252 ttttgctttttctaatagtg 271  Q
    |||| |||||| || |||||    
T  31433853 ttttactttttttagtagtg 31433872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 6718725 - 6718815
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  6718725 gagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 6718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 5744426 - 5744551
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||||| |||||||||||||||||||||||||||||| || |||||||||||| |||| || ||||||||||| ||||| |||    
T  5744426 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5744525  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||| ||| |||||    
T  5744526 ccctaattttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 5781385 - 5781510
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||||| |||||||||||||||||||||||||||||| || |||||||||||| |||| || ||||||||||| ||||| |||    
T  5781385 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5781484  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||| ||| |||||    
T  5781485 ccctaattttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 46012853 - 46012728
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||||||||||||||||  ||||||||||||||||| ||| |||||||||||  |||| |||||||||||||||||||| |||    
T  46012853 ttagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaattttcct 46012754  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | || ||||||||||||||| |||||    
T  46012753 ccctgattttgctttttctagtagtg 46012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 21088758 - 21088875
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||| ||||||||||  ||||||||||||||| |||||||||||  |||| ||||||||||||||||||||    
T  21088758 aaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgtgag--attttattttttccgtcactaattt 21088855  T
Q  242 ccctctctaattttgctttt 261  Q
    ||||| |||| |||||||||    
T  21088856 ccctccctaactttgctttt 21088875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 142 - 265
Target Start/End: Complemental strand, 26963378 - 26963255
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| ||||||| ||||||||||||||| |||||||||| | ||||||| |||||| |  ||||||||||||| ||||||||||||    
T  26963378 aaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacgtcactaattt 26963279  T
Q  242 ccctctctaattttgctttttcta 265  Q
    |||||  |||||||| ||||||||    
T  26963278 ccctcgttaattttgttttttcta 26963255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 36564568 - 36564437
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||| | | |||||||||||||||| |||||||||||| |||||||||||||| ||| ||| |||| ||||||||| ||||||||||    
T  36564568 aaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgtcagggattttattttttccatcactaattt 36564469  T
Q  242 ccctctctaattttgctttttctaatagtgag 273  Q
     |||| |||||||| ||||||||| |||||||    
T  36564468 tcctccctaatttttctttttctagtagtgag 36564437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 49915457 - 49915576
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||||||||||||||||||||||||||||| ||  ||||||| ||| |||| || ||||||||||| |||||    
T  49915457 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgttttccgtcacaaattt 49915556  T
Q  242 ccctctctaattttgctttt 261  Q
    |||||| ||||||| |||||    
T  49915557 ccctctttaattttactttt 49915576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 142 - 270
Target Start/End: Original strand, 27968921 - 27969049
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||| |||| ||||||||||||||||  ||  ||||||  |||| |||| |||||||||||||||    
T  27968921 aaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaacaaaggtgtgagagattttatttgttccgtcactaattt 27969020  T
Q  242 ccctctctaattttgctttttctaatagt 270  Q
    ||||| || ||||||||||||||| ||||    
T  27969021 ccctccctgattttgctttttctagtagt 27969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 20762045 - 20761950
Alignment:
Q  176 aattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||||||||||||||| |||||||||||  |||| ||||||||||||||||||||||||| || ||||||||||||||| |||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 27212910 - 27212811
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||  ||||||||||    
T  27212910 aaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagggattttattttttctatcactaattt 27212811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 10772183 - 10772053
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatt 240  Q
    |||||||| |||||||||  | |||||||||||||||| ||||| ||||||||||||| ||| ||||||||| ||||| || ||||||| ||||||||||    
T  10772183 aaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttgtgaagaattccatttttttctgtcactaatt 10772084  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    ||||||  ||||||| ||||||||| |||||    
T  10772083 tccctcgttaattttactttttctagtagtg 10772053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 6447344 - 6447246
Alignment:
Q  173 tctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    |||||||| ||||||||| |||| ||||||||||| || ||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||| |||||    
T  6447344 tctaattctgtcactaaactttgagaccaaagaatctgcgaggaattttattttttccatcactaatttccctccctaattttgcttttcctagtagtg 6447246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 15490041 - 15490170
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||| |||||||| |||||||||| |||||  |||||||||||||||||||||| ||||||||||  |||| ||||||| ||||||||||||    
T  15490041 aaatttagtgagagaaaacgtgaaatccctctttaattt-gtcactaaattttgcgaccaaaaaatttgtgagagattttatttttttcgtcactaattt 15490139  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
      ||| || |||||||||||| || ||||||    
T  15490140 ttctccctgattttgctttttttagtagtga 15490170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 20088406 - 20088540
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttt-----tccgtcact 236  Q
    |||||||| |||| ||||| | |||||| ||||||||||| ||||||||||||| ||||||||||||| |||| ||||| ||||||     |  ||| ||    
T  20088406 aaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttatttttttatatatgtcgct 20088505  T
Q  237 aatttccctctctaattttgctttttctaatagtg 271  Q
    ||||||||||||||||||| ||||||||| |||||    
T  20088506 aatttccctctctaattttactttttctagtagtg 20088540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 20615472 - 20615345
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| || ||||||||| |||| |||||||||||| |||| |||||||| |||||||| ||||||||||  |||| |||||||||||| |||||||    
T  20615472 aaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttattttttccgtctctaattt 20615373  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     ||||  |||||||   |||||||||||||    
T  20615372 tcctccttaatttt--cttttctaatagtg 20615345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 27182785 - 27182658
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||   ||||| |||||||||| ||||||||||| ||| |||||| | |||||||||| |||| |||||||  |||||||||||    
T  27182785 aaatttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggatttgtgagggattttatttttt--gtcactaattt 27182688  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||| ||| |||||    
T  27182687 ccctccctaattttgtttttcctagtagtg 27182658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 15501670 - 15501550
Alignment:
Q  153 gggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatt-ttttccgtcactaatttccctctctaa 251  Q
    ||||||| ||||||| | |||||||||||||| ||||||||| ||| |||  ||||| ||| |||||||||| |||||||||| ||||||  ||| ||||    
T  15501670 gggaaaatgtaaaattcatctctaattccgtccctaaattttacgatcaagaaatttatgaagaatttcatttttttccgtcattaatttttctcgctaa 15501571  T
Q  252 ttttgctttttctaatagtga 272  Q
    |||| ||||||||| ||||||    
T  15501570 ttttactttttctagtagtga 15501550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 253
Target Start/End: Complemental strand, 27711293 - 27711188
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    ||||||| ||||||| | ||||  |||||||||||||||||||||||||||||||||| | ||||| ||| | || ||||||||| |||||||||  |||    
T  27711293 ttagcgacggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaaaagtttgtaagggaatttattttttccttcactaatt--cct 27711196  T
Q  246 ctctaatt 253  Q
    ||||||||    
T  27711195 ctctaatt 27711188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 23233288 - 23233213
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttc 221  Q
    |||| |||||||||||| |||| |||||| |||||| |||||||||||||||||||||| ||||||||| ||||||    
T  23233288 ttagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagtatttgtgagaaatttc 23233213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 35579655 - 35579605
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaat 191  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35579655 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 271
Target Start/End: Original strand, 13615433 - 13615550
Alignment:
Q  154 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaatt 253  Q
    ||||||||| |||| ||||||||||| | |||||||||||||||   ||  |||||||||||  ||| |||| ||||||||||| ||| | |  ||||||    
T  13615433 ggaaaacgtgaaattcctctctaatttcatcactaaattttgcggttaagaaatttgtgaggggttttatttcttccgtcactatttttctttcctaatt 13615532  T
Q  254 ttgctttttctaatagtg 271  Q
    ||||||||||||||||||    
T  13615533 ttgctttttctaatagtg 13615550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 50240756 - 50240851
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| |||||| ||| | ||||| ||||||||||  || ||||||||||||| |||| |||||| ||||  |||| ||||||||||||||||||||    
T  50240756 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtcactaattt 50240851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 260
Target Start/End: Original strand, 45304374 - 45304458
Alignment:
Q  176 aattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgcttt 260  Q
    |||||||||| |||||||||  || |||||| |||| |||||||| ||||||||||||| ||||||| |||  | ||||||||||    
T  45304374 aattccgtcattaaattttgtaactaaagaaattgttaggaattttattttttccgtcattaatttctctccttgattttgcttt 45304458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 271
Target Start/End: Complemental strand, 23233218 - 23233184
Alignment:
Q  237 aatttccctctctaattttgctttttctaatagtg 271  Q
    |||||||||| ||||||||||||||||||||||||    
T  23233218 aatttccctccctaattttgctttttctaatagtg 23233184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 11386427 - 11386464
Alignment:
Q  228 tccgtcactaatttccctctctaattttgctttttcta 265  Q
    |||||||||||||||| || ||||||||||||||||||    
T  11386427 tccgtcactaatttccatcgctaattttgctttttcta 11386464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 4e-60; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 3823141 - 3823270
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3823141 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatttcattttttccgtcactaattt 3823240  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||||||||||||||||||    
T  3823241 ccctcgctaattttgctttttctaatagtg 3823270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 8555433 - 8555303
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8555433 aaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 8555334  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  8555333 ccctcgctaattttgctttttctagtagtga 8555303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 11938752 - 11938881
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  11938752 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttca-tttttccgtcactaatt 11938850  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||||||||||||| |||||    
T  11938851 tccctcgctaattttgctttttctagtagtg 11938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 19240875 - 19241004
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19240875 aaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 19240974  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  19240975 ccctcgctaattttgctttttctagtagtg 19241004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 19314059 - 19314188
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19314059 aaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 19314158  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  19314159 ccctcgctaattttgctttttctagtagtg 19314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 140 - 271
Target Start/End: Original strand, 19256218 - 19256349
Alignment:
Q  140 ttaaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaat 239  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  19256218 ttaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaat 19256317  T
Q  240 ttccctctctaattttgctttttctaatagtg 271  Q
    |||||||  ||||||||||||||||| |||||    
T  19256318 ttccctcgttaattttgctttttctagtagtg 19256349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 24576151 - 24576024
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24576151 atttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 24576052  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||||||||||||||| |||||    
T  24576051 ctcgctaattttgctttttctagtagtg 24576024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 17824745 - 17824615
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  17824745 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcacaaattt 17824646  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    |||||||||||||||||||||||| ||||||    
T  17824645 ccctctctaattttgctttttctagtagtga 17824615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 32247921 - 32248047
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32247921 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccct 32248020  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    |  ||||||||||||||||| ||||||    
T  32248021 cgttaattttgctttttctagtagtga 32248047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 43431688 - 43431559
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  43431688 aaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaattt 43431589  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||| ||||||||| |||||    
T  43431588 ccctcactaatttttctttttctagtagtg 43431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 27869248 - 27869375
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27869248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaatttcc 27869347  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||||||||||||||| |||||    
T  27869348 ctcgctaattttgctttttctagtagtg 27869375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 4330986 - 4331115
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  4330986 aaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 4331085  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  4331086 ccctcgctaattttgctttttctagtagtg 4331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 21350486 - 21350615
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21350486 aaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 21350585  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||  || ||||||||||||||| |||||    
T  21350586 cccttgcttattttgctttttctagtagtg 21350615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 23752411 - 23752286
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  23752411 ttagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatatccct 23752312  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | ||||||||||||||||||||||||    
T  23752311 cgctaattttgctttttctaatagtg 23752286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 30687944 - 30688073
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  30687944 aaatttagtgaaggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgattt 30688043  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  30688044 ccctcgctaattttgctttttctagtagtg 30688073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 141 - 265
Target Start/End: Complemental strand, 5670299 - 5670175
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  5670299 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaatt 5670200  T
Q  241 tccctctctaattttgctttttcta 265  Q
    ||||||  | |||||| ||||||||    
T  5670199 tccctcgttgattttgttttttcta 5670175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 24636659 - 24636790
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||    
T  24636659 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatt 24636758  T
Q  241 tccctctctaattttgct-ttttctaatagtg 271  Q
    ||||||  |||||||||| ||||||| |||||    
T  24636759 tccctcgttaattttgctattttctagtagtg 24636790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 25000561 - 25000431
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| ||||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  25000561 taaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaatt 25000462  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||| ||||||||| |||||    
T  25000461 tccctcactaattttactttttctagtagtg 25000431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 25273452 - 25273327
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  25273452 ttagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgaggactttcatttttt-cgtcactaatttccct 25273354  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    |  ||||||||||||||||| ||||||    
T  25273353 cgttaattttgctttttctagtagtga 25273327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 17103994 - 17103865
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  17103994 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcacaaattt 17103895  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    | ||||||||||||| |||||||| |||||    
T  17103894 ctctctctaattttgttttttctagtagtg 17103865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 19488186 - 19488061
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||  | |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19488186 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 19488087  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||||||| |||||    
T  19488086 cgctaattttgctttttctagtagtg 19488061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 27910884 - 27910763
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||| | |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| |||    
T  27910884 gagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 27910785  T
Q  251 attttgctttttctaatagtga 272  Q
    ||||||||||||||| ||||||    
T  27910784 attttgctttttctagtagtga 27910763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 27957303 - 27957182
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||| | |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| |||    
T  27957303 gagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 27957204  T
Q  251 attttgctttttctaatagtga 272  Q
    ||||||||||||||| ||||||    
T  27957203 attttgctttttctagtagtga 27957182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 17810308 - 17810436
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |    
T  17810308 atttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaattttc 17810407  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    ||| |||||||||||||||||| ||||||    
T  17810408 ctcgctaattttgctttttctagtagtga 17810436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 22939323 - 22939451
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  22939323 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgaggaatttcattttttccgtcactaatttcc 22939422  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
     || |||||||||||||||||| ||||||    
T  22939423 ttcactaattttgctttttctagtagtga 22939451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 151 - 271
Target Start/End: Complemental strand, 25655978 - 25655858
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  25655978 gagggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcacta 25655879  T
Q  251 attttgctttttctaatagtg 271  Q
    ||||||||||||||| |||||    
T  25655878 attttgctttttctagtagtg 25655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 264
Target Start/End: Original strand, 33652577 - 33652697
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33652577 atttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 33652676  T
Q  244 ctctctaattttgctttttct 264  Q
    ||| |||||||||||||||||    
T  33652677 ctcgctaattttgctttttct 33652697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 24193325 - 24193195
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||| | ||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  24193325 aaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 24193226  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  24193225 ccctcgctaattttgctttttctagtagtga 24193195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 30467084 - 30466954
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||  ||||| |||||||||| | |||||||||||||||||    
T  30467084 taaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaatt 30466985  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||||||||||||| |||||    
T  30466984 tccctcgctaattttgctttttctagtagtg 30466954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 16062059 - 16061938
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||| ||||||| ||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  16062059 gaggaaaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 16061960  T
Q  251 attttgctttttctaatagtga 272  Q
    ||||| ||||||||| ||||||    
T  16061959 attttactttttctagtagtga 16061938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 18010180 - 18010067
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| |||    
T  18010180 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttctctcgcta 18010081  T
Q  251 attttgctttttct 264  Q
    ||||||||||||||    
T  18010080 attttgctttttct 18010067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 6817062 - 6817192
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||| ||||    
T  6817062 aaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcactgattt 6817161  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
     |||  |||||||||||||||||| ||||||    
T  6817162 tccttgctaattttgctttttctagtagtga 6817192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 8824837 - 8824963
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||| |||| ||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||||    
T  8824837 ttagtgaggaaaaatgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatttccct 8824936  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | |||||||||||||||||| ||||||    
T  8824937 cgctaattttgctttttctagtagtga 8824963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 4647884 - 4647755
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||||||||| || |||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||    
T  4647884 aaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcactaattt 4647785  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||||||| |||||    
T  4647784 ccctcgctaattttgttttttctagtagtg 4647755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 13061056 - 13060931
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||    
T  13061056 ttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttacct 13060957  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||| ||| |||||    
T  13060956 cgctaattttgcttttgctagtagtg 13060931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 32961667 - 32961796
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| |||||| ||||    
T  32961667 aaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgtgaggaatttcattttttctgtcactgattt 32961766  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||||||||| || |||||    
T  32961767 ccctcgctaattttgctttttttagtagtg 32961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 40289549 - 40289421
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||    
T  40289549 aaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaaggaatttgtgagaaaattcattttttccgtcactaattt 40289451  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| ||||||||  |||||||| |||||    
T  40289450 tcctcgctaattttaatttttctagtagtg 40289421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 31399633 - 31399507
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||| |||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||||||    
T  31399633 ttagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatttccct 31399534  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    |  |||||||| |||||||| ||||||    
T  31399533 cgttaattttgttttttctagtagtga 31399507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 29350933 - 29351062
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttc-cgtcactaatttc 242  Q
    |||||| |||||||||| | |||||||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||  ||||||||||||    
T  29350933 atttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctagtcactaatttc 29351032  T
Q  243 cctctctaattttgctttttctaatagtga 272  Q
    |||| |||||||||||||||||| ||||||    
T  29351033 cctcgctaattttgctttttctagtagtga 29351062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 265
Target Start/End: Complemental strand, 9915169 - 9915047
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||| | |||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  9915169 aaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcgac-atggaatttgtgaggaatttcattttttccgtcactaattt 9915071  T
Q  242 ccctctctaattttgctttttcta 265  Q
    | ||| ||||||||||||||||||    
T  9915070 ctctcgctaattttgctttttcta 9915047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 33413095 - 33412977
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||| ||||||||||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcg------gaatttgtgaggaatttcattttttccgttactaatttccct 33413002  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||| ||||||||| |||||    
T  33413001 cgctaatttt-ctttttctagtagtg 33412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 19493781 - 19493688
Alignment:
Q  146 ttagcgagggaaaacgtaaaa-tccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 238  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19493781 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 19493688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 26399132 - 26399032
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||||||||||||||    
T  26399132 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaatttccct 26399033  T
Q  246 c 246  Q
    |    
T  26399032 c 26399032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 32323108 - 32323191
Alignment:
Q  1 aactaaatctaatgtaatcaattaaaatagtaagtctaactaatacctcccctttcacttctccctctcctttcctgtattcat 84  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32323108 aactaaatctaatgtaatcaattaaaatagtaaatctaactaatacctcccctttcacttctccctctcctttcccgtattcat 32323191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 29345079 - 29345209
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| || ||  |||||||||   |||| ||||||||||||||||||||    
T  29345079 aaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttattttttccgtcactaattt 29345178  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||| ||||||||| ||||||    
T  29345179 ccctccctaatttttctttttctagtagtga 29345209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 154 - 271
Target Start/End: Complemental strand, 21219357 - 21219240
Alignment:
Q  154 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaatt 253  Q
    |||| |||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| ||| || |||    
T  21219357 ggaatacgtgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgagtaatttcattttttccgtcactaatttctctcgctgatt 21219258  T
Q  254 ttgctttttctaatagtg 271  Q
    || ||||||||| |||||    
T  21219257 tttctttttctagtagtg 21219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 6816510 - 6816383
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||| ||||||||||||| ||||| ||||||||||| ||||| ||||||| | ||||||||||||    
T  6816510 atttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaattttatttttttcatcactaatttcc 6816411  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||| ||||||| ||| |||||    
T  6816410 ctcgctaattatgcttttcctagtagtg 6816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 37992107 - 37992226
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||| ||||| | |||| || |||||||||||||||||    
T  37992107 aaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtgaaggattttatgttttccgtcactaattt 37992206  T
Q  242 ccctctctaattttgctttt 261  Q
     |||| ||||||||||||||    
T  37992207 tcctccctaattttgctttt 37992226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 272
Target Start/End: Original strand, 8789873 - 8789978
Alignment:
Q  167 tccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaa 266  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| ||||| |||| |||||||||||||| |||     
T  8789873 tccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtcacaaattttcctccctaattttgcttttcctag 8789972  T
Q  267 tagtga 272  Q
    ||||||    
T  8789973 tagtga 8789978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 263
Target Start/End: Original strand, 15251610 - 15251730
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||  |||||||||||| |||||| |||||||||| |||||||||||||||||||||| || | |||||  |||| ||||||||||||||||||||    
T  15251610 aaatttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaa-aaatcgtgagagattttattttttccgtcactaattt 15251708  T
Q  242 ccctctctaattttgctttttc 263  Q
    ||||| ||||||||||||||||    
T  15251709 ccctccctaattttgctttttc 15251730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 154 - 271
Target Start/End: Original strand, 9631423 - 9631541
Alignment:
Q  154 ggaaaacgtaaaatccctctctaattcc-gtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaat 252  Q
    ||||||||| ||||  |||||||||||| |||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||| |||  |||||    
T  9631423 ggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgaggaattttattttttccgtcactaattttccttgctaat 9631522  T
Q  253 tttgctttttctaatagtg 271  Q
    ||||||||||||| |||||    
T  9631523 tttgctttttctagtagtg 9631541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 10917858 - 10917964
Alignment:
Q  165 aatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttct 264  Q
    |||||||||||||||||||||||||||||||| | |||  ||||| |||||||||| || ||||||||||| |||||||||| |||||||||||||||||    
T  10917858 aatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccctccctaattttgctttttct 10917957  T
Q  265 aatagtg 271  Q
    | |||||    
T  10917958 agtagtg 10917964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 25274654 - 25274735
Alignment:
Q  191 ttttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtga 272  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 25274735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 5879212 - 5879302
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgt 232  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||||||    
T  5879212 aaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgaggaattttattttttccgt 5879302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 31344298 - 31344182
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| ||||||||| || |||| ||||||||||||||||| |||||||||||| |||  ||||| |||| ||||| ||||||||| ||||||||||||     
T  31344298 tttagagagggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatttgattttttccatcactaatttcct 31344199  T
Q  245 tctctaattttgctttt 261  Q
    ||||||||||| |||||    
T  31344198 tctctaattttactttt 31344182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 6084374 - 6084246
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||  ||||| || ||||| |||||||||||||||||||||||||  |||||| ||||||| |||  |||| |||||||||||||||||||    
T  6084374 taaatttagagactgaaaatgtcaaatctctctctaattccgtcactaaatttttagaccaaggaatttgggag--attttattttttccgtcactaatt 6084277  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |  ||| |||||||||||||||||| |||||    
T  6084276 tatctccctaattttgctttttctattagtg 6084246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 42700743 - 42700657
Alignment:
Q  185 actaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||| |||||||| ||||||||| |||||    
T  42700743 actaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactgattttcctcgctaattttactttttctagtagtg 42700657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 17003270 - 17003399
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||  ||||||||| | |||| ||||||||| || ||| |||||| |||||  ||| |||||||||  |||||||||    
T  17003270 aaatttagagagggaaaacgtaaaattgctctctaatacagtcattaaattttgtgatcaaggaatttatgaggggttttattttttcccacactaattt 17003369  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| |||||||||||||||||| |||||    
T  17003370 tcctccctaattttgctttttctagtagtg 17003399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 18844673 - 18844544
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| || ||||||| | ||||||||||||||||  || | ||||||||||||||||| |||||||||||||||| || |||||| |||| ||||     
T  18844673 aaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgtgaggaattttatgttttccatcacaaatta 18844574  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    || || |||||||||||||| ||| |||||    
T  18844573 ccatccctaattttgcttttcctagtagtg 18844544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 14304241 - 14304359
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||  |||||||||| || ||| | |||||||||||  ||| |   |||||| |||| |||||||||||||| ||||||||||||||    
T  14304241 ttagtgagggaaaacgcgaaatccctctttatttctggcactaaattttatgacgaggaaatttgcgagggatttcattttttccatcactaatttccct 14304340  T
Q  246 ctctaattttgctttttct 264  Q
    | |||||||||||||||||    
T  14304341 cgctaattttgctttttct 14304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 265
Target Start/End: Complemental strand, 3692300 - 3692176
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatt 240  Q
    |||||||  |||| |||||||||||||| ||||||||||| | ||||||||||  ||| |||||||||||||||||||| | |||||||  ||||| |||    
T  3692300 aaatttatagaggtaaaacgtaaaatccttctctaattccattactaaattttatgactaaagaatttgtgaggaattttatttttttctatcacttatt 3692201  T
Q  241 tccctctctaattttgctttttcta 265  Q
    || ||| || |||||| ||||||||    
T  3692200 tctctccctgattttgttttttcta 3692176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 2265474 - 2265407
Alignment:
Q  175 taattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttc 242  Q
    |||||| |||||||||||||| || |||||||||||||| | |||| |||||||||||||||||||||    
T  2265474 taattctgtcactaaattttgtgatcaaagaatttgtgaaggattttattttttccgtcactaatttc 2265407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 15289679 - 15289749
Alignment:
Q  171 tctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    ||||||||||| |||||||||||| |||||||||||||||||||  |||| ||||| |||||| |||||||    
T  15289679 tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtcgctaattt 15289749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 15470048 - 15470118
Alignment:
Q  171 tctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    ||||||||||| |||||||||||| |||||||||||||||||||  |||| ||||| |||||| |||||||    
T  15470048 tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtcgctaattt 15470118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 41527825 - 41527730
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| |||||| ||| | ||||| ||| ||||||  || |||||||||||||| ||| |||||| ||||| |||| ||||||||||||||||||||    
T  41527825 ttagtgagggataacatgaaatctctccctaattatgttactaaattttgcgatcaaggaatttatgagggattttattttttccgtcactaattt 41527730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 35678154 - 35678063
Alignment:
Q  176 aattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaat 267  Q
    |||| |||||| ||||||| |||  || |||||||||| | |||| ||||||||| ||| |||||| ||||  |||||||||||||||||||    
T  35678154 aatttcgtcaccaaattttacgaataaggaatttgtgatggattttattttttccttcattaattttcctccttaattttgctttttctaat 35678063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 24479877 - 24479813
Alignment:
Q  207 tttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    ||||||||  |||| | |||||| ||||||||||||||||||||||| |||||||| || |||||    
T  24479877 tttgtgagagattttactttttctgtcactaatttccctctctaattatgctttttttagtagtg 24479813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 24479925 - 24479874
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttg 195  Q
    |||||| || ||||||||| |||| |||||||||||| ||||||||||||||    
T  24479925 atttagagaaggaaaacgtgaaattcctctctaattctgtcactaaattttg 24479874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 6103802 - 6103761
Alignment:
Q  224 tttttccgtcactaatttccctctctaattttgctttttcta 265  Q
    |||||| |||| |||||| |||||||||||||||||||||||    
T  6103802 tttttctgtcattaattttcctctctaattttgctttttcta 6103761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 25651089 - 25651133
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaa 189  Q
    ||||| || |||||||||||| || ||||||||||||||||||||    
T  25651089 tttagtgaaggaaaacgtaaagtctctctctaattccgtcactaa 25651133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 32323249 - 32323281
Alignment:
Q  314 ttcttcatattagtatgccattatattcttcga 346  Q
    ||||||||||||||||||||||||||| |||||    
T  32323249 ttcttcatattagtatgccattatatttttcga 32323281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 4e-60; HSPs: 84)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 28364921 - 28365050
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28364921 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 28365020  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  28365021 ccctcgctaattttgctttttctagtagtg 28365050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 9892973 - 9893103
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9892973 aaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 9893072  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  9893073 ccctcgctaattttgctttttctagtagtga 9893103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 15364587 - 15364458
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15364587 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 15364488  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  15364487 ccctcactaattttgctttttctagtagtg 15364458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 22579478 - 22579349
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22579478 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaattt 22579379  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||||||||||||||||||    
T  22579378 ccctcgctaattttgctttttctaatagtg 22579349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 25398012 - 25398135
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25398012 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 25398111  T
Q  242 ccctctctaattttgctttttcta 265  Q
    ||||| |||||||| |||||||||    
T  25398112 ccctcgctaatttttctttttcta 25398135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 495756 - 495626
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  495756 aaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 495657  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||  |||||||||||||||||| ||||||    
T  495656 cccttgctaattttgctttttctagtagtga 495626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 15448394 - 15448524
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||||||||||||||||||||||    
T  15448394 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaatt 15448493  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||||||||||||| |||||    
T  15448494 tccctcgctaattttgctttttctagtagtg 15448524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 150 - 270
Target Start/End: Original strand, 5360427 - 5360547
Alignment:
Q  150 cgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctct 249  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||    
T  5360427 cgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgct 5360526  T
Q  250 aattttgctttttctaatagt 270  Q
    |||||||||||||||| ||||    
T  5360527 aattttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 6598476 - 6598604
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  6598476 atttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatttcattttttccgtcactaatttcc 6598575  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    ||| |||||||||||||||||| ||||||    
T  6598576 ctcgctaattttgctttttctagtagtga 6598604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 5192314 - 5192195
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  5192314 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaattttcct 5192215  T
Q  246 ctctaattttgctttttcta 265  Q
    | ||||||||||||||||||    
T  5192214 cgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 30834089 - 30833960
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  30834089 aaatttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgaggaatttcattttttccgtcactaattt 30833990  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  30833989 ccctcgctaattttgctttttctagtagtg 30833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 26224440 - 26224568
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||    
T  26224440 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcc 26224539  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    ||| |||||||||||||||||| ||||||    
T  26224540 ctcgctaattttgctttttctagtagtga 26224568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 24661136 - 24661009
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24661136 atttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 24661037  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||||||||||||||| |||||    
T  24661036 ctcgctaattttgctttttctagtagtg 24661009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 2669319 - 2669448
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| | || |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  2669319 aaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcactaattt 2669418  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    |||||  ||||||||||||||||| |||||    
T  2669419 ccctcgttaattttgctttttctagtagtg 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 21990303 - 21990175
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||||||| ||||||    
T  21990303 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgaggaatttcat-ttttccgtcattaattt 21990205  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  21990204 ccctcgctaattttgctttttctagtagtg 21990175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 12499230 - 12499346
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  12499230 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12499329  T
Q  246 ctctaattttgcttttt 262  Q
    | ||||||||| |||||    
T  12499330 cgctaattttgtttttt 12499346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 12506559 - 12506675
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  12506559 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12506658  T
Q  246 ctctaattttgcttttt 262  Q
    | ||||||||| |||||    
T  12506659 cgctaattttgtttttt 12506675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 12509671 - 12509555
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  12509671 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12509572  T
Q  246 ctctaattttgcttttt 262  Q
    | ||||||||| |||||    
T  12509571 cgctaattttgtttttt 12509555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 11049878 - 11049751
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11049878 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 11049779  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||  ||||||||| |||||||| |||||    
T  11049778 cttgctaattttgttttttctagtagtg 11049751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 20182155 - 20182285
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||    
T  20182155 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaattt 20182254  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||| ||||||||| ||||||    
T  20182255 ccctcgctaattttactttttctagtagtga 20182285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 22153836 - 22153706
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||    
T  22153836 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaattt 22153737  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||| ||||||||| ||||||    
T  22153736 ccctcgctaattttactttttctagtagtga 22153706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 12200706 - 12200827
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||  | |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12200706 atttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 12200805  T
Q  244 ctctctaattttgctttttcta 265  Q
    ||| ||||||||||||||||||    
T  12200806 ctcactaattttgctttttcta 12200827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 1939358 - 1939242
Alignment:
Q  155 gaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattt 254  Q
    |||||| | |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  1939358 gaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgaggaatttcattttttcggtcactaatttccctcgctaattt 1939259  T
Q  255 tgctttttctaatagtg 271  Q
    ||||||||||| |||||    
T  1939258 tgctttttctagtagtg 1939242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 2992627 - 2992755
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||    
T  2992627 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccatcactaatttcc 2992726  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    ||| |||||| ||||||| ||| ||||||    
T  2992727 ctcgctaattatgcttttcctagtagtga 2992755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 6978300 - 6978416
Alignment:
Q  155 gaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattt 254  Q
    |||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  6978300 gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtaactaatttccctcgctaattt 6978399  T
Q  255 tgctttttctaatagtg 271  Q
    ||||||| |||||||||    
T  6978400 tgcttttcctaatagtg 6978416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 142 - 253
Target Start/End: Original strand, 12845013 - 12845124
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  12845013 aaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagcaattttattttttccgtcactaattt 12845112  T
Q  242 ccctctctaatt 253  Q
    ||||| ||||||    
T  12845113 ccctccctaatt 12845124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 21140949 - 21141072
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||||||||||||||    
T  21140949 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatttcattttttccgtcactaattt 21141048  T
Q  242 ccctctctaattttgctttttcta 265  Q
    |||||  |||||||||||||||||    
T  21141049 ccctcgttaattttgctttttcta 21141072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 6605621 - 6605495
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||||| ||||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  6605621 ttagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatttccct 6605522  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | |||||||||||||||||| ||||||    
T  6605521 cgctaattttgctttttctagtagtga 6605495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 12951718 - 12951847
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| || ||||||||||| |||||    
T  12951718 aaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttccgtcacaaattt 12951817  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    |||||||||||||||||||| ||| |||||    
T  12951818 ccctctctaattttgcttttcctagtagtg 12951847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 15961532 - 15961407
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||||||||| |||  ||||||| |||||||||||||||||||||||||||||||||    
T  15961532 ttagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatttccct 15961433  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    |  ||||||||||||||||| |||||    
T  15961432 cgttaattttgctttttctagtagtg 15961407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 22083848 - 22083977
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||||||| |||||    
T  22083848 aaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 22083947  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||| ||| |||||    
T  22083948 ccctccctaattttgcttttcctagtagtg 22083977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 12160973 - 12160847
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  12160973 atttagtgagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatttcattttttacgtcactaatttcc 12160875  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||||| ||||||||| |||||    
T  12160874 ctcgctaattttactttttctagtagtg 12160847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 26939599 - 26939726
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||||    
T  26939599 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttttgtcactaatttcc 26939698  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    |||  ||||||| ||||||||| |||||    
T  26939699 ctcagtaattttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 33250835 - 33250708
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33250835 atttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 33250736  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    |||  ||||||||  ||||||| |||||    
T  33250735 ctcgttaattttgtcttttctagtagtg 33250708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 14886571 - 14886693
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| |||||||| |||||||||||    
T  14886571 aaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggattttattttttctgtcactaattt 14886670  T
Q  242 ccctctctaattttgctttttct 264  Q
     |||| |||||||||||||||||    
T  14886671 tcctccctaattttgctttttct 14886693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 16250931 - 16250801
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||| ||||||||||| ||||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||    
T  16250931 aaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaattt 16250832  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    |||||  ||||||||||||||||| ||||||    
T  16250831 ccctcgttaattttgctttttctagtagtga 16250801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 152 - 265
Target Start/End: Original strand, 18492389 - 18492502
Alignment:
Q  152 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaa 251  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| | || ||||    
T  18492389 agggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgagaaatttcattttttccgtcactaatttgcatcgctaa 18492488  T
Q  252 ttttgctttttcta 265  Q
    ||||||||||||||    
T  18492489 ttttgctttttcta 18492502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 11077663 - 11077782
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||    
T  11077663 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 11077762  T
Q  246 ctctaattttgctttttcta 265  Q
    | |||||||| |||||||||    
T  11077763 ccctaatttttctttttcta 11077782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 18033654 - 18033524
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||  |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | |||||||||| |||||    
T  18033654 aaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattt-aatgtttccgtcacaaattt 18033556  T
Q  242 ccctctctaattttgctttttctaatagtgag 273  Q
    ||||| |||||||||||||| ||| |||||||    
T  18033555 ccctccctaattttgcttttcctagtagtgag 18033524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 12351715 - 12351585
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||  |||||||||||||||| ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  12351715 aaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaatttgtgaggaattttattttttccgtcactaattt 12351616  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    |||||  ||||| | ||||||||| ||||||    
T  12351615 ccctccttaattatactttttctagtagtga 12351585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 151 - 273
Target Start/End: Original strand, 17919555 - 17919677
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| | ||||| ||| |||    
T  17919555 gagggaaactgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgatgaatttcattttttccgtcattgatttctctcgcta 17919654  T
Q  251 attttgctttttctaatagtgag 273  Q
    |||||| |||||||| |||||||    
T  17919655 attttgttttttctagtagtgag 17919677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 27796961 - 27796835
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||| | ||| |||||| |||| ||| ||||||||| ||||||||||||||    
T  27796961 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgagaaatatcatttttttcgtcactaatttcc 27796862  T
Q  244 ctctctaattttgctttttctaatagt 270  Q
    ||| |||||||||||||||||| ||||    
T  27796861 ctcgctaattttgctttttctagtagt 27796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 9060101 - 9060229
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    ||||||||||||||||| | | ||||  ||||||||||| |||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  9060101 aaatttagcgagggaaa-catgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttattttttccgtcactaattt 9060199  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    | |||| |||||||||||||||| ||||||    
T  9060200 cgctctttaattttgctttttcttatagtg 9060229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 23281796 - 23281908
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||||    
T  23281796 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccatcactaattt 23281895  T
Q  242 ccctctctaatttt 255  Q
    ||||| ||||||||    
T  23281896 ccctc-ctaatttt 23281908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 28668114 - 28668239
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||  ||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  28668114 ttagtgagggaaattgtaaaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatttccct 28668213  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||| ||||||||| |||||    
T  28668214 cgctaattttactttttctagtagtg 28668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 15509188 - 15509288
Alignment:
Q  164 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttc 263  Q
    ||||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  15509188 aaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttttctttttc 15509287  T
Q  264 t 264  Q
    |    
T  15509288 t 15509288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 21691622 - 21691494
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa-tttcc 243  Q
    ||||| |||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| | ||||||| |||||    
T  21691622 tttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttatttttttcatcactaattttcc 21691523  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    |||||||||||| |||||| || ||||||    
T  21691522 ctctctaattttactttttttagtagtga 21691494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 343692 - 343593
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  343692 aaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtgaggaatttcattttttacgtcactaattt 343593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 14872133 - 14872248
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| || ||||||||||| |||||||||    
T  14872133 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 14872232  T
Q  246 ctctaattttgctttt 261  Q
    |||||||||| |||||    
T  14872233 ctctaatttttctttt 14872248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 18048798 - 18048929
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||| | ||||||||| |||||||  |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  18048798 aaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgagaaattttattttttccgtcactaattt 18048897  T
Q  242 ccctctctaattttgctttttctaatagtgag 273  Q
     |||||||||||||| |||| ||| |||||||    
T  18048898 tcctctctaattttgtttttcctagtagtgag 18048929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 27705432 - 27705531
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  27705432 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtaactaattt 27705531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 20692936 - 20692810
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || | | |||||| |||||||||||||||||||| |||    
T  20692936 ttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaattttcct 20692837  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    |  |||||||| ||||||||| |||||    
T  20692836 cgttaattttgttttttctaacagtga 20692810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 146 - 270
Target Start/End: Original strand, 10458778 - 10458902
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||| |||| |||||||  |||| ||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  10458778 ttagtgaggaaaaatgtaaaatttctctttaattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatttccct 10458877  T
Q  246 ctctaattttgctttttctaatagt 270  Q
    | |||||||| ||||||||| ||||    
T  10458878 cactaattttactttttctagtagt 10458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 271
Target Start/End: Original strand, 14772693 - 14772800
Alignment:
Q  164 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttc 263  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||| || |||| |||||| |||||| ||| ||||||||||||||||    
T  14772693 aaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgctttttc 14772792  T
Q  264 taatagtg 271  Q
    ||||||||    
T  14772793 taatagtg 14772800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 9885253 - 9885383
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||| |||||  ||||||||||||||| |||||  ||||||||||  |||| ||||||||||||||||||||    
T  9885253 aaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttattttttccgtcactaattt 9885352  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| || ||||||||||||||| ||||||    
T  9885353 ccctccctgattttgctttttctagtagtga 9885383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 11530235 - 11530364
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||| |||||||||||||||||||||||| |||  ||  ||||| |||| ||||| || ||||||||||| |||||    
T  11530235 aaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgttttccgtcacaaattt 11530334  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||| |||||||||    
T  11530335 ccctccctaattttgcttttcctaatagtg 11530364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 12680313 - 12680212
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| |||| ||||||||||||||||| |||||||| ||| ||||||||| ||||| ||||| ||||||||||||||||||||    
T  12680313 aaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgtgagcaattttattttttccgtcactaattt 12680214  T
Q  242 cc 243  Q
    ||    
T  12680213 cc 12680212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 151 - 271
Target Start/End: Complemental strand, 12205305 - 12205185
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||   ||||||||||||| ||||| || |||||||||||||||||| ||  |||    
T  12205305 gagggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtcactaatttctcttccta 12205206  T
Q  251 attttgctttttctaatagtg 271  Q
    ||||| |||||||||| ||||    
T  12205205 attttactttttctaagagtg 12205185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 13145016 - 13145100
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttcc 230  Q
    |||| |||||||||||| ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13145016 ttagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcc 13145100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 22055738 - 22055622
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||| ||||| | |||||||||||||||||| ||| | ||||||| |||||| ||||||||||||||||| |||||||| |||| |||||||||    
T  22055738 tttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtcattaatttccc 22055639  T
Q  245 tctctaattttgctttt 261  Q
    |||||||||||| ||||    
T  22055638 tctctaattttgttttt 22055622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 265
Target Start/End: Complemental strand, 12157476 - 12157382
Alignment:
Q  171 tctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttcta 265  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||| |||| |||||||||||||||||||||||||  |||||||||||||||||    
T  12157476 tctctaattccgtcactaaattttatgaccaaagattttgtaagggattttattttttccgtcactaatttccctccttaattttgctttttcta 12157382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 6065451 - 6065576
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||   |||| |||||||||||  |||| |||||||||||| |||||||||||||||  |||| ||||||||||||| |||||| |||    
T  6065451 ttagtgagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcct 6065550  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||| |||||||||    
T  6065551 ccctaattttgcttttcctaatagtg 6065576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 19175902 - 19175823
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattt 225  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  19175902 ttagtgagggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 19175823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 33547560 - 33547655
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| |||||||||| | |||||||| |||||||  |||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  33547560 ttagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttattttttccgtccctaattt 33547655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 5250195 - 5250278
Alignment:
Q  188 aaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| || ||||| ||||||||| |||||    
T  5250195 aaattttgcgaccaagaaatttatgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtg 5250278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 3673262 - 3673177
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttt 227  Q
    |||||||| |||| |||| |||||||   |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  3673262 aaatttagtgaggaaaaatgtaaaatttttctctaattccgtcactaaattttacgaccaaaaaatttgtgaggaatttcattttt 3673177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 11350196 - 11350308
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| ||||||| ||||||||||| |||||||||||||||||  || ||||||||   || |||  | ||||||||||| |||||||||    
T  11350196 ttagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatttgt---gatttttttgttttccgtcacaaatttccct 11350292  T
Q  246 ctctaattttgctttt 261  Q
    | ||||||||||||||    
T  11350293 ccctaattttgctttt 11350308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 1954917 - 1955009
Alignment:
Q  169 cctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttt 261  Q
    ||||| ||||||| |||| |||||||| ||||||  ||||||||| |||||| ||||||||||||||| ||||||||  ||||||||||||||    
T  1954917 cctctataattccatcacaaaattttgtgaccaagaaatttgtgacgaattttattttttccgtcactcatttcccttcctaattttgctttt 1955009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 14036630 - 14036751
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||| |||| |||||||||||| ||  ||||||||||||||        |||| |||||||||||    
T  14036630 aaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcgatcatggaatttgtgaggaa--------tttctgtcactaattt 14036721  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||| |||||| || |||||    
T  14036722 ccctcgctaattttcctttttttagtagtg 14036751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 10929617 - 10929506
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga-ggaatttcattttttccgtcactaatttccctctct 249  Q
    |||||||||| | ||||| |||| | ||||||||| ||||||||||||| || |||||||||| || |||| |||||||||||||||||||| | || ||    
T  10929617 gagggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtcactaattttcttccct 10929518  T
Q  250 aattttgctttt 261  Q
    ||||||| ||||    
T  10929517 aattttgatttt 10929506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 241
Target Start/End: Original strand, 5270405 - 5270502
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcga-ccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    ||||| ||||||||| || |||| |||||||||||||||||||||||||| ||| | ||| |||||||||| ||||| ||||||||| |||| |||||    
T  5270405 tttagagagggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaattttattttttccatcacaaattt 5270502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 13251439 - 13251378
Alignment:
Q  211 tgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtga 272  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  13251439 tgaggaatttcacttttttcgtcactaatttctctctctaattttgctttttctattagtga 13251378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 16118156 - 16118285
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||  |||||| ||| | ||||| |||||||||| ||||| |||||||||||| | | |||||||| ||  |||| | ||||||||||||||||||    
T  16118156 aaatttaatgagggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattttagtttttccgtcactaattt 16118255  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    || || |||||||| | ||| |||||||||    
T  16118256 ccgtccctaattttacctttcctaatagtg 16118285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 253
Target Start/End: Original strand, 2396213 - 2396325
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaa-tttcattttttccgtcactaatt 240  Q
    |||||||| |||  ||||||| ||||  ||||||  |||||||| |||||||| | |||||||||||| ||||||| ||| |||||||||||||||||||    
T  2396213 aaatttagagagcaaaaacgtgaaatttctctctgtttccgtcattaaattttacaaccaaagaatttatgaggaatttttattttttccgtcactaatt 2396312  T
Q  241 tccctctctaatt 253  Q
    | | |||||||||    
T  2396313 ttcttctctaatt 2396325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 11431769 - 11431649
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca--ttttttccgtcactaat 239  Q
    |||||||| |||| ||||||  | |||||||| |||||||||||||||||||||| |  ||||||||||||||  |||| |  |||||||||||||||||    
T  11431769 aaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattttgc-aataaagaatttgtgagagattttattttttttccgtcactaat 11431671  T
Q  240 ttccctctctaattttgctttt 261  Q
    ||  ||| |||||||| |||||    
T  11431670 ttttctccctaattttactttt 11431649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 8844252 - 8844168
Alignment:
Q  188 aaattttgcgaccaaagaatttgt-gaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    |||||||||||||||  ||||||| |||  |||| ||||||||||||||||||||||||| || ||||| ||||||||| |||||    
T  8844252 aaattttgcgaccaataaatttgttgagagattttattttttccgtcactaatttccctccctgatttttctttttctagtagtg 8844168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 9878596 - 9878514
Alignment:
Q  189 aattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtga 272  Q
    |||||| |||||||||||||||| ||| |||| |||||| || ||||||| |||||||  ||||||||||||||||| ||||||    
T  9878596 aattttacgaccaaagaatttgttagggattttattttt-ccatcactaaattccctccataattttgctttttctattagtga 9878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 28221647 - 28221730
Alignment:
Q  187 taaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagt 270  Q
    |||| ||||||| |||| ||||| |||| ||||| ||||||||| ||||||||||||||| || |||||| |||| ||||||||    
T  28221647 taaagtttgcgatcaaaaaatttatgagaaattttattttttccctcactaatttccctccctgattttgtttttcctaatagt 28221730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 28234036 - 28234123
Alignment:
Q  183 tcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagt 270  Q
    |||||||| ||| |||||||  |||||||||| ||||| ||||||||| ||| ||||||| |||  | ||||||||||| ||||||||    
T  28234036 tcactaaagtttacgaccaataaatttgtgagaaattttattttttccctcattaatttcgctccttgattttgcttttcctaatagt 28234123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 33191180 - 33191219
Alignment:
Q  232 tcactaatttccctctctaattttgctttttctaatagtg 271  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  33191180 tcactaatttccctcgctaattttgctttttctaatagtg 33191219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 30745842 - 30745729
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||| |||||  ||||||| |||||||||||||||| ||| |||| ||||||| |   |||| ||||||||  |||||||||   ||    
T  30745842 ttagagagggaaaacgtgaaatc--tctctaagtccgtcactaaattttacgatcaaaaaatttgtaaatgattttattttttctatcactaattcttct 30745745  T
Q  246 ctctaattttgctttt 261  Q
    | |||| |||||||||    
T  30745744 ccctaactttgctttt 30745729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 7000949 - 7000882
Alignment:
Q  205 aatttgtgaggaatttcattttttccg-tcactaatttccctctctaattttgctttttctaatagtg 271  Q
    ||||||||||| |||||||||||| |  ||||| ||||||||| |||||||||||||| || ||||||    
T  7000949 aatttgtgagggatttcatttttttctatcactgatttccctcactaattttgcttttactgatagtg 7000882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 19175876 - 19175937
Alignment:
Q  212 gaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtgag 273  Q
    ||||||||| |  |||||| ||||||||||||||||||||||||  ||||| || |||||||    
T  19175876 gaggaattttacattttccctcactaatttccctctctaatttttgtttttttagtagtgag 19175937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 13668123 - 13668071
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaatttt 194  Q
    |||||||| |||||||||||| |||| || |||||||||| ||| ||||||||    
T  13668123 aaatttagagagggaaaacgtgaaattcccctctaattccatcattaaatttt 13668071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 4340416 - 4340546
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4340416 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 4340515  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||  ||||||||||||||||||||||||    
T  4340516 tcccttgctaattttgctttttctaatagtg 4340546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 41120867 - 41120737
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  41120867 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaatt 41120768  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||||||||||||| |||||    
T  41120767 tccctcgctaattttgctttttctattagtg 41120737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 28229580 - 28229455
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28229580 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 28229481  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||||||| |||||    
T  28229480 cgctaattttgctttttctagtagtg 28229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 46790014 - 46790139
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46790014 ttagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 46790113  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||||||| |||||    
T  46790114 cgctaattttgctttttctagtagtg 46790139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 46786088 - 46785961
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  46786088 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaatt 46785989  T
Q  241 tccctctctaattttgctttttctaata 268  Q
    |||||| |||||||||||||||||||||    
T  46785988 tccctcgctaattttgctttttctaata 46785961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 22603558 - 22603687
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  22603558 aaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatttcattttttccatcactaattt 22603657  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||  |||||||||||||||||| |||||    
T  22603658 cccttgctaattttgctttttctagtagtg 22603687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 9110102 - 9109974
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  9110102 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcc 9110003  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    ||| |||||||||||||||||| ||||||    
T  9110002 ctcgctaattttgctttttctagtagtga 9109974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 12720821 - 12720949
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  12720821 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccgtcactaatttcc 12720920  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    ||| |||||||||||||||||| ||||||    
T  12720921 ctcgctaattttgctttttctagtagtga 12720949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 6459229 - 6459356
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6459229 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 6459328  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| ||||||| |||||||||| |||||    
T  6459329 ctcgctaatttcgctttttctagtagtg 6459356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 45839304 - 45839431
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45839304 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 45839403  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    |||  ||||||||||||||||| |||||    
T  45839404 ctcgttaattttgctttttctagtagtg 45839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 142 - 246
Target Start/End: Complemental strand, 41071964 - 41071860
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41071964 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttctccgtcactaattt 41071865  T
Q  242 ccctc 246  Q
    |||||    
T  41071864 ccctc 41071860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 20408289 - 20408158
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  20408289 aaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 20408190  T
Q  242 ccctctctaattttgctttttctaatagtgag 273  Q
     |||| |||||||||||||||||| |||||||    
T  20408189 tcctcgctaattttgctttttctagtagtgag 20408158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 29549428 - 29549558
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||| ||||||| ||||||||||||    
T  29549428 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcgtcactaattt 29549527  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  29549528 ccctcgctaattttgctttttctagtagtga 29549558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 14760877 - 14761006
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  14760877 aaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcacaaattt 14760976  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    |||||| ||||||||||||||||| |||||    
T  14760977 ccctctttaattttgctttttctagtagtg 14761006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 50845459 - 50845330
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||    
T  50845459 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 50845360  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  50845359 ccctccctaattttgctttttctagtagtg 50845330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 6412180 - 6412053
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  6412180 atttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaatttcc 6412081  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||||||||||||||| |||||    
T  6412080 ctcgctaattttgctttttctagtagtg 6412053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 9985456 - 9985325
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9985456 aaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgattttttccgtcactaattt 9985357  T
Q  242 ccctctctaattttgctttttctaatagtgag 273  Q
    ||||  ||||||||| |||||||| |||||||    
T  9985356 cccttgctaattttgttttttctagtagtgag 9985325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 8941119 - 8940993
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  8941119 ttagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatttccct 8941020  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | |||||||||||||||||| ||||||    
T  8941019 cgctaattttgctttttctagtagtga 8940993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 9177109 - 9177239
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  9177109 taaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaatt 9177208  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| ||||||||| |||||||| |||||    
T  9177209 tccctcgctaattttgttttttctagtagtg 9177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 9464113 - 9464235
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  9464113 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 9464212  T
Q  242 ccctctctaattttgctttttct 264  Q
    || || |||||||| ||||||||    
T  9464213 ccgtcactaattttactttttct 9464235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 15243095 - 15243224
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  15243095 aaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 15243194  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    | ||| || ||||| ||||||||| |||||    
T  15243195 ctctcgctgatttttctttttctagtagtg 15243224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 19865258 - 19865383
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||    
T  19865258 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattttcct 19865357  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||| ||||||||| |||||    
T  19865358 cgctaattttactttttctagtagtg 19865383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 41752445 - 41752572
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||    
T  41752445 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaattttattttttccgtcactaatttcc 41752544  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
     || |||||||||||||||||| |||||    
T  41752545 gtcactaattttgctttttctagtagtg 41752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 152 - 271
Target Start/End: Complemental strand, 46339564 - 46339445
Alignment:
Q  152 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaa 251  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  46339564 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 46339465  T
Q  252 ttttgctttttctaatagtg 271  Q
    |||||||||||||| |||||    
T  46339464 ttttgctttttctagtagtg 46339445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 12161824 - 12161954
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||    
T  12161824 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaataattt 12161923  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
     |||| |||||||| ||||||||| ||||||    
T  12161924 tcctcgctaattttactttttctagtagtga 12161954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 18890678 - 18890548
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||| |||||||| |||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||| ||||||||||    
T  18890678 aaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgaggaatttcattttttccatcactaattt 18890579  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| ||||||||||||||||| |||||||    
T  18890578 ccctcgctaattttgctttttctgatagtga 18890548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 22158812 - 22158934
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||    
T  22158812 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctgtcactaattt 22158911  T
Q  242 ccctctctaattttgctttttct 264  Q
    ||||| |||||||| ||||||||    
T  22158912 ccctcgctaattttactttttct 22158934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 23457907 - 23458036
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||    
T  23457907 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaataattt 23458006  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| |||||||| ||||||||| |||||    
T  23458007 tcctcgctaattttactttttctagtagtg 23458036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 38531299 - 38531170
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||| |||||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||    
T  38531299 aaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcacttattt 38531200  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||| ||||||||| |||||    
T  38531199 ccctccctaattttactttttctagtagtg 38531170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 52183688 - 52183817
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||||||| ||||||    
T  52183688 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcattaattt 52183787  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    |||||  ||||||||||||||||| |||||    
T  52183788 ccctcgttaattttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 17661060 - 17661190
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||||||||||   |||||||||||||||| ||||||||||||||||||||    
T  17661060 aaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcactaattt 17661159  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    || ||  ||||||||||||||||||||||||    
T  17661160 ccgtcgttaattttgctttttctaatagtga 17661190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 145 - 271
Target Start/End: Original strand, 19081741 - 19081867
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||| ||||||||| |||||||||||||    
T  19081741 tttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccc 19081840  T
Q  245 tctctaattttgctttttctaatagtg 271  Q
    ||||||||||| |||||| || |||||    
T  19081841 tctctaattttactttttttagtagtg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 145 - 271
Target Start/End: Original strand, 19129629 - 19129755
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||| ||||||||| |||||||||||||    
T  19129629 tttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccc 19129728  T
Q  245 tctctaattttgctttttctaatagtg 271  Q
    ||||||||||| |||||| || |||||    
T  19129729 tctctaattttactttttttagtagtg 19129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 50092427 - 50092297
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||| | |||||||||||||||||||||||||||||||| || ||   |||||||||||||||||||||||||||||||||||||    
T  50092427 aaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttttccgtcactaattt 50092328  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||| ||||||||| ||||||    
T  50092327 ccctcgctaatttttctttttctagtagtga 50092297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 17200139 - 17200010
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||  |||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  17200139 aaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactgattt 17200040  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||||||| |||||    
T  17200039 ccctcgctaattttgttttttctagtagtg 17200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 18895029 - 18894900
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||||| ||||||||||||    
T  18895029 aaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgaggtattttatttttttcgtcactaattt 18894930  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| |||||||||||||| ||| |||||    
T  18894929 tcctcgctaattttgcttttcctagtagtg 18894900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 51973434 - 51973563
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||||||||| || ||||  |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||| ||||||||    
T  51973434 aaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagattttatgaggaatttcattttttccgttactaattt 51973533  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  51973534 ccctcgctaattttgctttttctagtagtg 51973563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 13102326 - 13102456
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||| |||||| || ||||||||||| |||||    
T  13102326 aaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtgatgaattttatgttttccgtcacaaattt 13102425  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    |||||  ||||||||||||| ||| ||||||    
T  13102426 ccctccttaattttgcttttcctagtagtga 13102456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 25788104 - 25787998
Alignment:
Q  164 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttc 263  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||||||| |||| ||||||||||||||||    
T  25788104 aaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgctttttc 25788005  T
Q  264 taatagt 270  Q
    || ||||    
T  25788004 tagtagt 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 41359001 - 41359094
Alignment:
Q  146 ttagcgagggaaaacgtaaaa-tccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 238  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41359001 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 41359094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 152 - 271
Target Start/End: Complemental strand, 7181674 - 7181555
Alignment:
Q  152 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaa 251  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||   ||| ||||||||||||  |||||||||||||||||||||||  ||||    
T  7181674 agggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatatgtgaggaattttcttttttccgtcactaatttcccttgctaa 7181575  T
Q  252 ttttgctttttctaatagtg 271  Q
    |||||||||||||| |||||    
T  7181574 ttttgctttttctagtagtg 7181555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 16913706 - 16913587
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||||||||||||| | |||||||| |||| || ||||||||||||||||| ||||||||||||||||||||    
T  16913706 aaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgaggaattttattttttccgtcactaattt 16913607  T
Q  242 ccctctctaattttgctttt 261  Q
    ||||  ||||||||||||||    
T  16913606 cccttcctaattttgctttt 16913587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 32046886 - 32046985
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| ||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  32046886 aaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaattt 32046985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 12989862 - 12989992
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||| ||| ||||||| ||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||| |||||    
T  12989862 aaattttgagagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaattttattttttccgtcaccaattt 12989961  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    | ||||||||||||||||||| || ||||||    
T  12989962 ctctctctaattttgctttttttagtagtga 12989992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 41063207 - 41063336
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||| ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||||||||||||||||||    
T  41063207 aaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttattttttccgtcactaattt 41063306  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||   ||||||| ||||||||| |||||    
T  41063307 tccttcttaattttactttttctagtagtg 41063336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 48522537 - 48522658
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||| | |||| |||||  |||||||||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||||| |||| |||    
T  48522537 gagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttattttttctgtcactaattttcctcgcta 48522636  T
Q  251 attttgctttttctaatagtga 272  Q
    ||||||||||||||| ||||||    
T  48522637 attttgctttttctagtagtga 48522658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 7830041 - 7830171
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||| |||||| |||||||||||||||||||||| ||||||||||| ||||| || |||||| |||  |||||    
T  7830041 aaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgagaaattttatgttttccatcataaattt 7830140  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||| ||| ||||||    
T  7830141 ccctccctaattttgcttttcctagtagtga 7830171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 145 - 271
Target Start/End: Original strand, 11917799 - 11917924
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||  |||||| ||||||| |||||||    
T  11917799 tttagagagggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgagatattttgtttttt-cgtcactgatttccc 11917897  T
Q  245 tctctaattttgctttttctaatagtg 271  Q
    ||||||||||| ||||| |||||||||    
T  11917898 tctctaatttttcttttcctaatagtg 11917924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 13308945 - 13308819
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||| ||||| | |||||||||||||||| | ||||||||||||||||||||  |||||||||||||||| |||||||| | |||||||||||||    
T  13308945 ttagtgaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatttccct 13308846  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    ||||||||||| |||| ||| ||||||    
T  13308845 ctctaattttgtttttcctagtagtga 13308819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 46865253 - 46865382
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    ||||| || |||||| ||||| |||||||||||||||||| | ||||||||||||| ||||  ||||||||||| |||| ||||||||||||||||||||    
T  46865253 aaattcagagagggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggattttattttttccgtcactaattt 46865352  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||| |||| ||||||||| |||||    
T  46865353 ccctccctagtttttctttttctagtagtg 46865382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 142 - 270
Target Start/End: Complemental strand, 9259312 - 9259184
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||| ||||||||||||||||||||||||||||||||   |||||||||| |||||  |||||||||||||||||||    
T  9259312 aaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaattttcttttttccgtcactaattt 9259213  T
Q  242 ccctctctaattttgctttttctaatagt 270  Q
     ||||  |||||||| |||||||| ||||    
T  9259212 tcctcgttaattttgttttttctagtagt 9259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 145 - 271
Target Start/End: Original strand, 20580922 - 20581049
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatttcc 243  Q
    ||||| |||||||||||| |||||||||||||||| ||| | ||||||||||||| || ||||||||||| ||||| | |||||||| ||||||||||||    
T  20580922 tttagagagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatttaatttttttccatcactaatttcc 20581021  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    |||||||||||| |||||| || |||||    
T  20581022 ctctctaattttactttttttagtagtg 20581049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 13523087 - 13522993
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaat 239  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||| | ||||||    
T  13523087 tttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaattatattttttccataactaat 13522993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 13195593 - 13195722
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| | |||||||||||||||||| |||||||||||||||| || | ||||| ||||||||||| |  |||||| |||||||| |    
T  13195593 aaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgaggaattttaacttttccatcactaatct 13195692  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||| ||||||| |||||    
T  13195693 ccctccctaattttgcattttctagtagtg 13195722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 255
Target Start/End: Complemental strand, 22789720 - 22789607
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||| || |||||||| ||||||||||||||||||||  ||||||||||| ||||| || |||||||||||||||||    
T  22789720 aaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgtgagaaattttatgttttccgtcactaattt 22789621  T
Q  242 ccctctctaatttt 255  Q
     |||| ||||||||    
T  22789620 tcctccctaatttt 22789607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 26825253 - 26825373
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||||||||| |  | |||||||||||||||||||| |     
T  26825253 tttagagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttattttttccgtcactaattttct 26825352  T
Q  245 tctctaattttgctttttcta 265  Q
    ||  ||| |||||||||||||    
T  26825353 tccataactttgctttttcta 26825373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 27253955 - 27253855
Alignment:
Q  171 tctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagt 270  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||| |||||| |||| |||||||| ||||||||| ||||    
T  27253955 tctctaattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttttctttttctagtagt 27253856  T
Q  271 g 271  Q
    |    
T  27253855 g 27253855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 6775897 - 6776015
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||  ||||| |||||| |||||||||||||||  |||| |||||| |||||||||||||||||| |||| ||||||||| ||||| ||||    
T  6775897 aaatttagtgagaaaaaacttaaaattcctctctaattccgttgctaagttttgcaaccaaagaatttgtgagggattttattttttccatcact-attt 6775995  T
Q  242 ccctctctaattttgctttt 261  Q
    ||||||||||||||||||||    
T  6775996 ccctctctaattttgctttt 6776015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 142 - 265
Target Start/End: Complemental strand, 20290449 - 20290327
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||| |||||||| |||||  |||||||||||||||||||||||| || |||   ||||||||||||||||||| |||||||||||||||||    
T  20290449 aaattttgtgagagaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttgtgaggaatttcat-ttttccgtcactaattt 20290351  T
Q  242 ccctctctaattttgctttttcta 265  Q
    ||||| |||||||| |||||||||    
T  20290350 ccctcgctaattttactttttcta 20290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 170 - 261
Target Start/End: Complemental strand, 30928479 - 30928388
Alignment:
Q  170 ctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttt 261  Q
    |||||||||||  |||||||||||||||||||| |||||||| ||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  30928479 ctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttattttttccgtcactaatttccctctctaattttgctttt 30928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 12174893 - 12174796
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| |||||||||| | |||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||||    
T  12174893 atttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttttctgttactaattt 12174796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 12370070 - 12369951
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    ||||||||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||       ||    |||||||||||||||||||    
T  12370070 aaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaagaattt------cat----ttttttccgtcactaattt 12369981  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  12369980 ccctcgctaattttgctttttctagtagtg 12369951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 164 - 272
Target Start/End: Complemental strand, 12806944 - 12806835
Alignment:
Q  164 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag-gaatttcattttttccgtcactaatttccctctctaattttgcttttt 262  Q
    |||||||||| |||||||||||||||||||| |||||||  |||||||||| || ||   ||||||| |||||||||||||||| ||||| ||||||||     
T  12806944 aaatccctctataattccgtcactaaattttacgaccaagaaatttgtgagagatttattttttttctgtcactaatttccctccctaatattgcttttc 12806845  T
Q  263 ctaatagtga 272  Q
    ||||||||||    
T  12806844 ctaatagtga 12806835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 29093683 - 29093554
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| || |||||| ||||||| ||||||||||||| ||| ||||||||||||  || ||| ||||||||||||| |||||||| |||  || |||    
T  29093683 aaatttagagatggaaaatgtaaaattcctctctaattccatcattaaattttgcgattaaggaacttgtgaggaattttattttttcggtccttagttt 29093584  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    |||||  ||||||| ||||||||| |||||    
T  29093583 ccctccttaattttactttttctagtagtg 29093554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 18788039 - 18787921
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||  |||||||||||| | |||  |||||||||  |||||||||||||||||||||| |||||  |||| |||| |||||||| |||||||||||    
T  18788039 aaatttaaagagggaaaacgtgacatcaatctctaatt--gtcactaaattttgcgaccaaaaaatttaggagggattttattttttc-gtcactaattt 18787943  T
Q  242 ccctctctaattttgctttttc 263  Q
    || || ||||||||||||||||    
T  18787942 ccatccctaattttgctttttc 18787921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 39748943 - 39749073
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| || ||||||| | ||||||| ||| |||| |||||||||||||||||| |||| || ||| |||  ||||  |||||||||||||||||||    
T  39748943 aaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaacaaattgcgagagatttttttttttccgtcactaattt 39749042  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    | |||  ||||||||||||| ||| ||||||    
T  39749043 cgctccttaattttgcttttcctagtagtga 39749073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 16258615 - 16258496
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||||| ||| |||||| |||||||||||||||||||||| ||||| |||| ||||||  |||| ||| |||||| |||||| ||    
T  16258615 aaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaatctgtgagatattttattctttccgccactaaatt 16258516  T
Q  242 ccctctctaattttgctttt 261  Q
     | ||  |||||||||||||    
T  16258515 acatccttaattttgctttt 16258496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 9882162 - 9882070
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| |||| ||||| | |||| |||||||||||||||||||||||||||||   ||  ||||||||||| |||| ||||||||||||||||||||    
T  9882162 ttagtgaggaaaaacattaaattcctctctaattccgtcactaaattttgcg---aagaaatttgtgagggattttattttttccgtcactaattt 9882070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 270
Target Start/End: Complemental strand, 17734083 - 17733954
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaatttt-gcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    |||||||| |||||||||| | ||||| ||| |||||||| ||| |||||||| ||||||||  ||||||||||  |||| || |||||||||||||| |    
T  17734083 aaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagattttatcttttccgtcactaaat 17733984  T
Q  241 tccctctctaattttgctttttctaatagt 270  Q
    |  ||| |||||||||||||| ||| ||||    
T  17733983 tttctccctaattttgcttttcctagtagt 17733954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 14486761 - 14486698
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaaga 205  Q
    |||||||| |||||||||||| ||||| |||||||||||||||||| |||||||||| ||||||    
T  14486761 aaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattttgcgatcaaaga 14486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 45919024 - 45918918
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatt-ttttccgtcactaatttccctctct 249  Q
    |||||| ||| | ||||||||||||||||| || |||||||||||| ||||| |||||| ||||| |||||||| ||||||||||| | ||| |||| ||    
T  45919024 gagggataacatcaaatccctctctaattctgttactaaattttgcaaccaaggaatttatgagggatttcatttttttccgtcacaagttttcctc-ct 45918926  T
Q  250 aattttgc 257  Q
    ||||||||    
T  45918925 aattttgc 45918918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 49881058 - 49881183
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||| ||| | ||||||||||||||| | || ||||||||||| |||||| |||||| |||   |||| ||||||||||||||||| || |||    
T  49881058 ttagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtcactaactttcct 49881157  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | |||||||||| ||| |||| |||||    
T  49881158 c-ctaattttgcatttcctaacagtga 49881183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 6091386 - 6091286
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| || |||||||||||||| ||| |||||||| |||||  ||||||||| | |||||||| | ||| |||||| |||||||| || ||||||    
T  6091386 taaatttagagatggaaaacgtaaaattcctatctaattctgtcacagaattttgcggcaaaagaattagagagaaatttcgttttttccatcgctaatt 6091287  T
Q  241 t 241  Q
    |    
T  6091286 t 6091286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 25687409 - 25687310
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| || ||||||| | | |||||||||||||||| |||||||||||||| |  | | |||| ||||||||||||||||| |  |||||||||||    
T  25687409 aaatttagagaaggaaaacattacatccctctctaattccttcactaaattttgccaaaagaaaattggtgaggaatttcattttgtttgtcactaattt 25687310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 142 - 246
Target Start/End: Original strand, 30673504 - 30673608
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||||||||||  | ||||||||||  || |||| ||||||||| | |||| ||||  ||| ||||||||||    
T  30673504 aaatttagtgagggaaaacatgaaatccctctctaattctattactaaattttatgagcaaaaaatttgtgaaggattttatttcctccttcactaattt 30673603  T
Q  242 ccctc 246  Q
     ||||    
T  30673604 tcctc 30673608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 52621164 - 52621263
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||| | |||| | || |||||||| ||||||||||||  ||| ||| ||||| ||||  |||| ||||||||| ||||||||||    
T  52621164 aaatttagtgaggaaaaacatgaaattcttcactaattccatcactaaattttatgactaaataatttatgagagattttattttttccatcactaattt 52621263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 25679973 - 25680019
Alignment:
Q  224 tttttccgtcactaatttccctctctaattttgctttttctaatagt 270  Q
    ||||||| |||||||||| | |||||||||||||||||| |||||||    
T  25679973 tttttccctcactaattttcgtctctaattttgctttttttaatagt 25680019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 27864889 - 27864965
Alignment:
Q  170 ctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctc 246  Q
    ||||||||||| ||||||||||||||| |  ||| |||| |||||| |||||| | | | | |||||||||||||||    
T  27864889 ctctctaattctgtcactaaattttgcaaagaaaaaattagtgagggatttcaatatattcatcactaatttccctc 27864965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 26495 - 26622
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26495 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 26594  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
     || |||||||||||||||||| |||||    
T  26595 gtcactaattttgctttttctagtagtg 26622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 6e-56; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 19839187 - 19839317
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  19839187 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattt 19839286  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  19839287 ccctcgctaattttgctttttctagtagtga 19839317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 146 - 274
Target Start/End: Original strand, 38645762 - 38645890
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38645762 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatttccct 38645861  T
Q  246 ctctaattttgctttttctaatagtgaga 274  Q
    | |||||||||||||||||| ||||||||    
T  38645862 cgctaattttgctttttctagtagtgaga 38645890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 4586888 - 4586758
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||    
T  4586888 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaatt 4586789  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||||||||||||| |||||    
T  4586788 tccctcgctaattttgctttttctagtagtg 4586758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 55309342 - 55309212
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatt-ttttccgtcactaatt 240  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  55309342 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtcactaatt 55309243  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||||||||||||| |||||    
T  55309242 tccctcgctaattttgctttttctagtagtg 55309212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 9670604 - 9670477
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9670604 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 9670505  T
Q  246 ctctaattttgctttttctaatagtgag 273  Q
    | |||||||| ||||||||| |||||||    
T  9670504 cgctaatttttctttttctagtagtgag 9670477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 25026564 - 25026694
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  25026564 taaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaatt 25026663  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||| |||||||||||||||    
T  25026664 tccctcactaattttactttttctaatagtg 25026694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 5473857 - 5473986
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||    
T  5473857 aaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgaggaatttcatttttcccgtcactaattt 5473956  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  5473957 ccctcgctaattttgctttttctagtagtg 5473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 30269117 - 30268988
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  30269117 aaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtcactgattt 30269018  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  30269017 ccctcgctaattttgctttttctagtagtg 30268988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 30283072 - 30283201
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  30283072 aaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtcactgattt 30283171  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  30283172 ccctcgctaattttgctttttctagtagtg 30283201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 32175866 - 32175737
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  32175866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaattt 32175767  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    |||||  ||||||||||||||||| |||||    
T  32175766 ccctcgttaattttgctttttctagtagtg 32175737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 38619859 - 38619984
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  38619859 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatttccct 38619958  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||||||| |||||    
T  38619959 cgctaattttgctttttctagtagtg 38619984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 45532708 - 45532579
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||  |||||||||||||||||||||||||||||||||||||    
T  45532708 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaattt 45532609  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    |||||  |||||||||||||||||||||||    
T  45532608 ccctcgttaattttgctttttctaatagtg 45532579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 13028946 - 13028816
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  13028946 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaatt 13028847  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    | |||| |||| ||||||||||||| |||||    
T  13028846 ttcctcgctaagtttgctttttctagtagtg 13028816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 7112071 - 7111945
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  7112071 ttagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 7111972  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | |||||||||||||||||| ||||||    
T  7111971 cgctaattttgctttttctagtagtga 7111945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 9238745 - 9238624
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  9238745 gagggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 9238646  T
Q  251 attttgctttttctaatagtga 272  Q
    |||||||||||| || ||||||    
T  9238645 attttgctttttttagtagtga 9238624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 13565044 - 13564915
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||| |||||||||| |||||||||| ||||||||||||||||    
T  13565044 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcactaattt 13564945  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  13564944 ccctcgctaattttgctttttctagtagtg 13564915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 19680553 - 19680424
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||    
T  19680553 aaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaatt 19680454  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||| ||||||||| |||||    
T  19680453 ccctcactaatttttctttttctagtagtg 19680424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 22168278 - 22168405
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  22168278 atttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcattttttccgtcactaatttcc 22168377  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||||||||||||||| |||||    
T  22168378 ctcgctaattttgctttttctagtagtg 22168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 25147729 - 25147848
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||  |||||    
T  25147729 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcataaattt 25147828  T
Q  242 ccctctctaattttgctttt 261  Q
    ||||||||||||||||||||    
T  25147829 ccctctctaattttgctttt 25147848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 54539293 - 54539424
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  54539293 taaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatt 54539392  T
Q  241 tccctctctaattttgctttttctaatagtga 272  Q
    | |||  |||||||||||||||||| ||||||    
T  54539393 ttccttgctaattttgctttttctagtagtga 54539424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 18714909 - 18715039
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||| |||    
T  18714909 taaatttagtaaggaaaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttatt 18715008  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| ||||| |||||||||||| |||||    
T  18715009 tccctcgctaatattgctttttctagtagtg 18715039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 29625337 - 29625463
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||| ||||||||||    
T  29625337 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatttccct 29625436  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | ||||||||||||||| || ||||||    
T  29625437 cgctaattttgctttttatattagtga 29625463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 27040154 - 27040025
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||  |||||||||||||||||||    
T  27040154 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttcttttttccgtcactaattt 27040055  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  27040054 ccctcgctaattttgctttttctagtagtg 27040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 46286358 - 46286229
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||||||||||||||    
T  46286358 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcactaattt 46286259  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    || || |||||||||||||||||| |||||    
T  46286258 ccgtcactaattttgctttttctagtagtg 46286229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 2275805 - 2275677
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  2275805 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttcc 2275706  T
Q  244 ctctctaa-ttttgctttttctaatagtg 271  Q
    ||| |||| ||||| |||||||| |||||    
T  2275705 ctcgctaatttttgttttttctagtagtg 2275677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 142 - 265
Target Start/End: Complemental strand, 37378752 - 37378629
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  37378752 aaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcaataattt 37378653  T
Q  242 ccctctctaattttgctttttcta 265  Q
     |||| ||||||||||||||||||    
T  37378652 tcctcgctaattttgctttttcta 37378629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 18051847 - 18051969
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||    
T  18051847 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtcactaattt 18051946  T
Q  242 ccctctctaattttgctttttct 264  Q
    ||||| |||||||||||||||||    
T  18051947 ccctcactaattttgctttttct 18051969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 30568128 - 30568006
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||||||||| |||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  30568128 aaattttgtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgaggaatttcattttttccgtcactaattt 30568029  T
Q  242 ccctctctaattttgctttttct 264  Q
    | ||| ||||||||| |||||||    
T  30568028 cgctcgctaattttgttttttct 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 141 - 270
Target Start/End: Complemental strand, 4627208 - 4627079
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||| |||||||| |||||||||| |||||||||||||| ||| |||  |||||||||||||||||||||||||||||| |||||    
T  4627208 taaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaatt 4627109  T
Q  241 tccctctctaattttgctttttctaatagt 270  Q
    |||||| |||||||||||||||||| ||||    
T  4627108 tccctcgctaattttgctttttctagtagt 4627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 22128441 - 22128312
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||  |||| ||||||||||||||||||||    
T  22128441 aaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaattt 22128342  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| || |||||| |||||||| |||||    
T  22128341 ccctccctgattttgttttttctagtagtg 22128312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 30507999 - 30508124
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||  |||| |||    
T  30507999 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagattttcct 30508098  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||||||| |||||    
T  30508099 cgctaattttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 44783492 - 44783620
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctct-ctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttc 242  Q
    ||||| ||| ||||||| | |||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44783492 atttatcgaaggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttc 44783591  T
Q  243 cctctctaattttgctttttctaatagtg 271  Q
    |||| ||| |||||||||||||| |||||    
T  44783592 cctcgctagttttgctttttctagtagtg 44783620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 12071972 - 12072099
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| || ||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||| ||| |||||||||||||||  |||||||||||     
T  12071972 atttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttatgaagaatttcattttttcgatcactaatttcg 12072071  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| ||||||||||||||||||||||||    
T  12072072 ctcgctaattttgctttttctaatagtg 12072099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 38223518 - 38223641
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||| |    
T  38223518 aaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttattttttccgtcactaatct 38223617  T
Q  242 ccctctctaattttgctttttcta 265  Q
    ||||| |||||||| | |||||||    
T  38223618 ccctccctaattttacattttcta 38223641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 8878891 - 8879013
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||||||| |||||| ||||  |||| ||||||||||||||||||||    
T  8878891 aaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgagagattttattttttccgtcactaattt 8878990  T
Q  242 ccctctctaattttgctttttct 264  Q
    |||||||| ||||||||||||||    
T  8878991 ccctctctgattttgctttttct 8879013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 33914067 - 33914197
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||| | |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||||| |||||    
T  33914067 aaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtcacaaattt 33914166  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||| ||| ||||||    
T  33914167 ccctccctaattttgcttttcctagtagtga 33914197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 36689685 - 36689807
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||    
T  36689685 aaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcattttttccatcactaattt 36689784  T
Q  242 ccctctctaattttgctttttct 264  Q
    |||||  |||||||| |||||||    
T  36689785 ccctcgttaattttgttttttct 36689807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 1638455 - 1638584
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||| |||| |||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  1638455 aaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcactaattt 1638554  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||| ||| |||||    
T  1638555 ccctccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 14944758 - 14944853
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  14944758 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttacgtcactaattt 14944853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 42055409 - 42055536
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||| |||| |||||||| ||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||  ||||||||    
T  42055409 ttagtgaggaaaaatgtaaaatcactcactaattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatttccct 42055508  T
Q  246 ctctaattttgctttttctaatagtgag 273  Q
    | |||||||||||||||||| |||||||    
T  42055509 cgctaattttgctttttctagtagtgag 42055536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 5399617 - 5399747
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||| |||||    
T  5399617 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 5399716  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
     |||| |||| ||||||||| ||| ||||||    
T  5399717 tcctccctaagtttgcttttcctagtagtga 5399747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 9239406 - 9239288
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||| |||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  9239406 ttagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttccct 9239307  T
Q  246 ctctaattttgctttttct 264  Q
    |  ||||||| || |||||    
T  9239306 cgttaattttactctttct 9239288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 152 - 270
Target Start/End: Complemental strand, 24682446 - 24682328
Alignment:
Q  152 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaa 251  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  24682446 agggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcattaatttccctccctaa 24682347  T
Q  252 ttttgctttttctaatagt 270  Q
    |||| ||||||||| ||||    
T  24682346 tttttctttttctagtagt 24682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 271
Target Start/End: Original strand, 9913269 - 9913395
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||  || |||||||| |||| |||||||||||||||||||| ||    
T  9913269 tttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttccgtcactaattttcc 9913368  T
Q  245 tctctaattttgctttttctaatagtg 271  Q
    || ||||||||  |||||||| |||||    
T  9913369 tccctaattttaatttttctagtagtg 9913395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 12105995 - 12106120
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | ||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||| ||| ||||||||||    
T  12105995 ttagtgagggaaaacatgaaacccctctctaattccgtcactaaattt-gcgaccaaagaatttatgagaaattttattttttccatcaataatttccct 12106093  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | |||||||| ||||||||||||||||    
T  12106094 cgctaattttactttttctaatagtga 12106120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 9059072 - 9058951
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||| | |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| || ||||| ||||| |||||||||| |||    
T  9059072 gagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtcacaaatttccctcccta 9058973  T
Q  251 attttgctttttctaatagtga 272  Q
    ||||||||||| ||| ||||||    
T  9058972 attttgcttttcctagtagtga 9058951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 45091281 - 45091399
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||    
T  45091281 taaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga-------------gaggaatttcattttttccgtcactaatt 45091367  T
Q  241 tccctctctaattttgctttttctaatagtga 272  Q
    |||||| ||||||||| |||||||| ||||||    
T  45091368 tccctcgctaattttgttttttctagtagtga 45091399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 22156728 - 22156631
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||| ||||||||||    
T  22156728 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcataatttccttcactaattt 22156631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 34557191 - 34557304
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||||||||||||| ||||||||  ||| ||||||||||| ||||||||| |||||| |||||||||| | |||| ||||||||||||||||||||    
T  34557191 aaatttagcgagggaaaaggtaaaatctgtctttaattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtcactaattt 34557290  T
Q  242 ccctctctaatttt 255  Q
     |||| ||||||||    
T  34557291 tcctcactaatttt 34557304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 18744199 - 18744100
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||||||  |||||   |||||||||| ||||||||||||||||||||||||||    
T  18744199 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatttgtgagaaatttcattttttccgtcactaattt 18744100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 4606954 - 4606829
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||| || ||||| |||||||||||||||||||||||||||| ||||  |||||||||   |||| ||||| ||||||||||||||||||    
T  4606954 ttagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatttccct 4606855  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||| ||||| ||| |||||    
T  4606854 ccctaattttacttttcctagtagtg 4606829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 16915377 - 16915506
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||  | ||||| ||||||||||  |||||||||||||||||||||  ||||||||||  |||| ||||||||| ||||||||||    
T  16915377 aaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttattttttccatcactaattt 16915476  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| || ||||||||||||||| |||||    
T  16915477 tcctccctgattttgctttttctagtagtg 16915506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 145 - 272
Target Start/End: Original strand, 3613006 - 3613134
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga-ggaatttcattttttccgtcactaatttcc 243  Q
    ||||| |||| ||||||| |||| ||||||||||| |||||||||| ||||||||||| |||||||||| |||||||  ||||||  | ||| || ||||    
T  3613006 tttagagaggaaaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgtgagggaatttattttttttagccaccaaattcc 3613105  T
Q  244 ctctctaattttgctttttctaatagtga 272  Q
    ||| |||||||||||||||||||||||||    
T  3613106 ctccctaattttgctttttctaatagtga 3613134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 142 - 270
Target Start/End: Original strand, 29238431 - 29238559
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||| ||||||| || |||||||| ||||||||||||||  |||||||||||||||||  |||| ||||||||||||| ||||||    
T  29238431 aaatttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttattttttccgtcaataattt 29238530  T
Q  242 ccctctctaattttgctttttctaatagt 270  Q
    ||||| ||| ||||| |||| ||| ||||    
T  29238531 ccctccctagttttgtttttcctagtagt 29238559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 30420162 - 30420033
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| | | |||||| | |||| ||||||||||| |||||||||||  | |||||||  ||||||| | |||||| ||||||||||||||||||||    
T  30420162 aaatttagagtgagaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttattttttccgtcactaattt 30420063  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| |||||||||||||||||| |||||    
T  30420062 tcctccctaattttgctttttctagtagtg 30420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 313604 - 313694
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| ||| | ||||||||||||||||  || ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  313604 gagggataacatgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtcactaattt 313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 37761971 - 37761912
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgacca 201  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37761971 aaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 37761912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 39234950 - 39235071
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcat-tttttccgtcactaatt 240  Q
    |||||||| || ||||||||| |||||  |||||||||  || ||||||||||||||||||| |||||||||| ||||| || ||||||||| || | ||    
T  39234950 aaatttagagaaggaaaacgtgaaatc--tctctaattttgttactaaattttgcgaccaaaaaatttgtgagaaattttatgtttttccgttacaagtt 39235047  T
Q  241 tccctctctaattttgctttttct 264  Q
    |||||| ||||||||| |||||||    
T  39235048 tccctccctaattttggtttttct 39235071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 6553816 - 6553911
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| |||||| ||| | ||||||||||||||||  || ||||||||||||||||||  ||||| ||||| |||| ||||||||||||||||||||    
T  6553816 ttagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtcactaattt 6553911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 25225107 - 25225234
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||  |||| ||| ||||||||||||||||| || | |||||||||||| |||||||||||  ||  |||| || |||||||||| | ||||    
T  25225107 aaatttagagaaagaaatcgtgaaatccctctctaattctgttattaaattttgcgatcaaagaatttgacag--attttatattttccgtcattgattt 25225204  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||| ||||||||| |||||    
T  25225205 ccctccctaatttttctttttctagtagtg 25225234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 272
Target Start/End: Original strand, 23104378 - 23104487
Alignment:
Q  164 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatttccctctctaattttgcttttt 262  Q
    |||||||||||||||   ||| |||||||||||||||| ||||||||||| |||||| | ||||||||||| || ||||   || ||||||||| ||||     
T  23104378 aaatccctctctaatcatgtccctaaattttgcgaccatagaatttgtgatgaattttatttttttccgtccctgatttttgtccctaattttgtttttc 23104477  T
Q  263 ctaatagtga 272  Q
    ||| ||||||    
T  23104478 ctagtagtga 23104487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 6e-56; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 37552232 - 37552362
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37552232 taaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 37552331  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||||||||||||| |||||    
T  37552332 tccctcgctaattttgctttttctagtagtg 37552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 12779605 - 12779735
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12779605 taaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaatt 12779704  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||||||||||||| |||||    
T  12779705 tccctcgctaattttgctttttctagtagtg 12779735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 43408636 - 43408511
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  43408636 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 43408537  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||||||| |||||    
T  43408536 cactaattttgctttttctagtagtg 43408511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 41736178 - 41736308
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  41736178 aaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 41736277  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  41736278 ccctcgctaattttgctttttctagtagtga 41736308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 13788184 - 13788055
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  13788184 aaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactgattt 13788085  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  13788084 ccctcgctaattttgctttttctagtagtg 13788055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 154 - 275
Target Start/End: Complemental strand, 44476492 - 44476371
Alignment:
Q  154 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaatt 253  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  44476492 ggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatttccctcgctaatt 44476393  T
Q  254 ttgctttttctaatagtgagaa 275  Q
    |||||||||||| |||||||||    
T  44476392 ttgctttttctagtagtgagaa 44476371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 142 - 270
Target Start/End: Complemental strand, 28319708 - 28319580
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  28319708 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 28319609  T
Q  242 ccctctctaattttgctttttctaatagt 270  Q
    ||||| |||||||||||||||||| ||||    
T  28319608 ccctcactaattttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 13613219 - 13613101
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  13613219 tttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttttttcgtcactaattttcc 13613120  T
Q  245 tctctaattttgctttttc 263  Q
    || |||||||| |||||||    
T  13613119 tcgctaatttttctttttc 13613101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 32008958 - 32009088
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatt 240  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  32008958 aaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtcactaatt 32009057  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    | |||| |||||||||||||||||| |||||    
T  32009058 ttcctcgctaattttgctttttctagtagtg 32009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 32300457 - 32300579
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  32300457 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 32300556  T
Q  242 ccctctctaattttgctttttct 264  Q
    ||||| |||||||||||||||||    
T  32300557 ccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 7093578 - 7093703
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7093578 ttagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccct 7093677  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||| ||| |||||    
T  7093678 cgctaattttgcttttactagtagtg 7093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 142 - 265
Target Start/End: Complemental strand, 37724121 - 37723998
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37724121 aaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37724022  T
Q  242 ccctctctaattttgctttttcta 265  Q
    ||||| || ||||| |||||||||    
T  37724021 ccctcgctgatttttctttttcta 37723998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 23858087 - 23857958
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  23858087 taaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttca-ttttcccgtcactaatt 23857989  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| |||||||||||||||||| |||||    
T  23857988 tccctcgctaattttgctttttctagtagtg 23857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 41637624 - 41637754
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||    
T  41637624 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 41637723  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  41637724 ccctccctaattttgctttttctagtagtga 41637754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 144 - 273
Target Start/End: Complemental strand, 18551380 - 18551251
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||| |    
T  18551380 atttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattttc 18551281  T
Q  244 ctctctaattttgctttttctaatagtgag 273  Q
    ||| ||||||||||||||| || |||||||    
T  18551280 ctcgctaattttgctttttttagtagtgag 18551251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 155 - 272
Target Start/End: Complemental strand, 22140480 - 22140363
Alignment:
Q  155 gaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattt 254  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  22140480 gaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcgttaattt 22140381  T
Q  255 tgctttttctaatagtga 272  Q
    ||||||||||| ||||||    
T  22140380 tgctttttctagtagtga 22140363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 28841469 - 28841342
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| | |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  28841469 atttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgttactaatttcc 28841370  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||||||||||| ||| |||||    
T  28841369 ctcgctaattttgcttttcctagtagtg 28841342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 38362396 - 38362277
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||||||||||||||||||||||| | |||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38362396 ttagcgagggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 38362297  T
Q  246 ctctaattttgctttttcta 265  Q
      ||||||||||||||||||    
T  38362296 tactaattttgctttttcta 38362277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 1141542 - 1141664
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  1141542 aaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 1141641  T
Q  242 ccctctctaattttgctttttct 264  Q
    ||||| |||||||||||||||||    
T  1141642 ccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 15636864 - 15636742
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  15636864 aaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 15636765  T
Q  242 ccctctctaattttgctttttct 264  Q
    ||||| |||||||||||||||||    
T  15636764 ccctcgctaattttgctttttct 15636742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 20065203 - 20065074
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||| ||||||| ||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  20065203 aaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 20065104  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  20065103 ccctcgctaattttgctttttctagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 30783344 - 30783475
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||    
T  30783344 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaattttatgttttccgtcacaaattt 30783443  T
Q  242 ccctctctaattttgctttttctaatagtgag 273  Q
    ||||  |||||||||||||| ||| |||||||    
T  30783444 cccttcctaattttgcttttcctagtagtgag 30783475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 21293840 - 21293710
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||| ||||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  21293840 aaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcattttttccgtcactaattt 21293741  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| ||||||||| |||||||| ||||||    
T  21293740 ccctcgctaattttgttttttctagtagtga 21293710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 27040003 - 27039906
Alignment:
Q  176 aattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtgag 273  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagtagtgag 27039906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 32185838 - 32185967
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||| ||||||   |||||| ||||||||||||||||||||||||||||||    
T  32185838 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgcgaggaatttcattttttccgtcactaattt 32185937  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||||||| |||||    
T  32185938 ccctcgctaattttgttttttctagtagtg 32185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 270
Target Start/End: Complemental strand, 23388507 - 23388379
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||| |||||    
T  23388507 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaagaatttcattttttccgtcaccaattt 23388408  T
Q  242 ccctctctaattttgctttttctaatagt 270  Q
    ||||| ||||||||| |||||||| ||||    
T  23388407 ccctcgctaattttgttttttctagtagt 23388379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 14757248 - 14757121
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| |    
T  14757248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcattaattttc 14757149  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
     || |||||||||||||||||| |||||    
T  14757148 ttcgctaattttgctttttctagtagtg 14757121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 146 - 277
Target Start/End: Complemental strand, 26243446 - 26243315
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||| ||| |||||||||||||    
T  26243446 ttagtgaggaaaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccct 26243347  T
Q  246 ctctaattttgctttttctaatagtgagaagg 277  Q
    |  ||||||||||||||||| ||||| |||||    
T  26243346 cgttaattttgctttttctagtagtgtgaagg 26243315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 8430302 - 8430431
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||| ||| || | |||||||||||||||| ||||||||||||||||||||    
T  8430302 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttattttttccgtcactaattt 8430401  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||| | ||||||||| |||||||| |||||    
T  8430402 cccccgctaattttgttttttctagtagtg 8430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 29749532 - 29749403
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| || ||||||||||| |||||    
T  29749532 aaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaattt 29749433  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||  |||||||||||||||||| |||||    
T  29749432 cccttcctaattttgctttttctagtagtg 29749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 31266360 - 31266489
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |  |||||    
T  31266360 aaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtaaaaaattt 31266459  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||| ||||| ||| |||||    
T  31266460 ccctccctaattttacttttcctagtagtg 31266489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 28262370 - 28262493
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||||||||| ||||||||||    
T  28262370 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccatcactaattt 28262469  T
Q  242 ccctctctaattttgctttttcta 265  Q
    ||||  |||||||| |||||||||    
T  28262470 cccttgctaattttactttttcta 28262493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 164 - 271
Target Start/End: Original strand, 44722960 - 44723067
Alignment:
Q  164 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttc 263  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  44722960 aaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccatcattaatttccctcgctaattttgctttttc 44723059  T
Q  264 taatagtg 271  Q
    || |||||    
T  44723060 tagtagtg 44723067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 36550844 - 36550970
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||| ||||||| ||||||||||||||||||||| || |||||||| |||| ||||||||| ||||||||||||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgagggattt-attttttccatcactaatttcc 36550942  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||||||||||||| |||||||| |||||    
T  36550943 ctctctaattttgttttttctagtagtg 36550970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 27327622 - 27327751
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||| ||||||||||||||||||||||| | || ||||||||||||||||| || ||||||||||| |||||    
T  27327622 aaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgttttccgtcacaaattt 27327721  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    || || |||||||||||||| ||| |||||    
T  27327722 ccatccctaattttgcttttcctagtagtg 27327751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 18916529 - 18916411
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||| |||| ||||||||||| |||| | ||||||||||| ||||||    
T  18916529 aaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggatttta-tttttccgtcagtaattt 18916431  T
Q  242 ccctctctaattttgctttt 261  Q
    ||||  ||||||||||||||    
T  18916430 ccctgcctaattttgctttt 18916411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 26687820 - 26687689
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatt 240  Q
    |||||||| || ||||||| | |||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||||||||||| |||||    
T  26687820 aaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttatttttttccgtcattaatt 26687721  T
Q  241 tccctctctaattttgctttttctaatagtga 272  Q
    ||||||  |||||||||||| |||| ||||||    
T  26687720 tccctccttaattttgctttatctagtagtga 26687689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 37802507 - 37802378
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||| || ||| |||  |||| |||||||||||||  |||||    
T  37802507 aaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaaa-aaattgcgagagattttattttttccgtcatcaattt 37802409  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    | ||| |||||||||||||| ||| ||||||    
T  37802408 ctctccctaattttgcttttcctagtagtga 37802378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 40018808 - 40018938
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||| |||||||||||  ||||| |||||||| ||||| |||||||| || ||||| ||||||||||||||||||||    
T  40018808 aaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgtaagaaattttattttttccgtcactaattt 40018907  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    |||| | |||||||| |||||||| ||||||    
T  40018908 ccctttttaattttgttttttctagtagtga 40018938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 44366123 - 44366007
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||| ||||| | |||||||||||||||||| ||| | ||||||| |||||| ||||||||||||||||| |||||||| |||| |||||||||    
T  44366123 tttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtcattaatttccc 44366024  T
Q  245 tctctaattttgctttt 261  Q
    |||||||||||| ||||    
T  44366023 tctctaattttgttttt 44366007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 35697483 - 35697573
Alignment:
Q  164 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattt 254  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||  |||| ||||||||||| ||||||||||||| |||||||    
T  35697483 aaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttattttttccgttactaatttccctccctaattt 35697573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 145 - 271
Target Start/End: Original strand, 2556104 - 2556230
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| ||||||||| || ||||   |||||||||||||||||||||||| | |||||  |||||||||| ||||| ||||||||| |||||||||| ||    
T  2556104 tttagagagggaaaatgtgaaatttttctctaattccgtcactaaattttacaaccaagaaatttgtgagaaattttattttttccatcactaattttcc 2556203  T
Q  245 tctctaattttgctttttctaatagtg 271  Q
    ||||||||||| |||||| || |||||    
T  2556204 tctctaattttactttttttagtagtg 2556230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 9004437 - 9004307
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| |||||||  |||||||||||| |||||||||||||  || || |||||| |||| |||||||||| ||||||||||||| |    
T  9004437 aaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaatttcatttcttccgtcactaatat 9004338  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
     ||||  |||||||  |||||||| ||||||    
T  9004337 tcctcgttaattttattttttctagtagtga 9004307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 18609520 - 18609649
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||| ||||||||||| | | || ||||||||||| ||| |||||||||||| |||  ||||| ||||||||||||||    
T  18609520 aaatttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagggattctattttctccgtcactaattt 18609619  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     ||||  || |||| ||||| |||||||||    
T  18609620 tcctccttatttttacttttcctaatagtg 18609649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 27523019 - 27523084
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 209  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  27523019 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 27523084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 245
Target Start/End: Complemental strand, 13134749 - 13134646
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| || ||||||| | |||||||| |||||||  |||| |||||||| |||| ||| || |||||||| |||| ||||||||||||||||||||    
T  13134749 aaatttagagatggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattgtgagggattttattttttccgtcactaattt 13134650  T
Q  242 ccct 245  Q
    ||||    
T  13134649 ccct 13134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 8763640 - 8763757
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| || ||||||| | |||||| ||||||||||||||| ||||||||  || ||| ||||||||| |  |||| ||||||||||||||||| ||    
T  8763640 aaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtgcgagattttattttttccgtcactaactt 8763739  T
Q  242 ccctctctaattttgctt 259  Q
      ||| ||||||||||||    
T  8763740 ttctccctaattttgctt 8763757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 9590476 - 9590588
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    ||||||||||||  ||||||| ||||| ||||||||||  || ||||||||||||||  ||  ||||| | |   |||||||||||||||||||||||||    
T  9590476 aaatttagcgagcaaaaacgtgaaatcgctctctaattttgttactaaattttgcgatgaagtaatttttaaaagatttcattttttccgtcactaattt 9590575  T
Q  242 ccctctctaattt 254  Q
    ||||| |||||||    
T  9590576 ccctccctaattt 9590588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 22192232 - 22192315
Alignment:
Q  189 aattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtga 272  Q
    ||||||| ||||||  ||||||||||  |||| ||||||||||||||||||||| ||| || ||||||||||||||| ||||||    
T  22192232 aattttgtgaccaataaatttgtgagagattttattttttccgtcactaatttctctccctgattttgctttttctagtagtga 22192315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 36373906 - 36374033
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| || |||| |||||  ||||| ||||||||||||| ||| ||| ||||||| |||| |||| |||||||||||| |||| ||    
T  36373906 aaatttagtgagggaaaatgtgaaattcctct--aattcagtcactaaattttacgatcaaggaatttgagagggattttattttttccgtcgctaaatt 36374003  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
      ||| ||||||||| |||| ||| |||||    
T  36374004 tactccctaattttgtttttcctagtagtg 36374033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 12860295 - 12860235
Alignment:
Q  205 aatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttcta 265  Q
    |||| |||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  12860295 aattagtgagggatttcactttttccgtcactaattttcctccctaattttgctttttcta 12860235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 16098999 - 16098916
Alignment:
Q  189 aattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtga 272  Q
    |||||||| ||||| ||| |||||||  |||| |||||||| || ||||||||||||| ||||||||| |||||||| ||||||    
T  16098999 aattttgcaaccaaggaaattgtgagagatttaattttttctgttactaatttccctccctaattttgatttttctagtagtga 16098916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 31966644 - 31966555
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| ||| | ||||| ||||||||||  || |||||||||||||||||| |||||| | ||| |||| ||||||||||||||||||||    
T  31966644 gagggataacatgaaatctctctctaattatgttactaaattttgcgaccaaggaatttat-agggattttattttttccgtcactaattt 31966555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 29998685 - 29998633
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcg 197  Q
    ||||| || ||||||||| |||||| |||||||||||||||||||||||||||    
T  29998685 tttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgcg 29998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 27058445 - 27058407
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattc 180  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  27058445 aaatttagtgagggaaaacgtaaaatccctctctaattc 27058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 9358 - 9229
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9358 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 9259  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  9258 ccctcactaattttgctttttctagtagtg 9229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 110; Significance: 2e-55; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 3752 - 3881
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3752 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 3851  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| |||||||||||||||||| |||||    
T  3852 tcctcgctaattttgctttttctagtagtg 3881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 202784 - 202914
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  202784 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaattt 202883  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||| ||||||||| ||||||    
T  202884 ccctcgctaatttttctttttctagtagtga 202914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 274732 - 274665
Alignment:
Q  204 gaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  274732 gaatttgtgaagaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 274665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 276263 - 276207
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcga 198  Q
    |||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  276263 aaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgcga 276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 22220 - 22351
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  22220 taaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaatt 22319  T
Q  241 tccctctctaattttgctttttctaatagtga 272  Q
    |||||| |||||||||||||||||| ||||||    
T  22320 tccctcgctaattttgctttttctagtagtga 22351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 618306 - 618433
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  618306 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 618405  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| ||||||||||||||||||||||||    
T  618406 ctcgctaattttgctttttctaatagtg 618433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 38837796 - 38837670
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38837796 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 38837697  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | |||||||||||||||||| ||||||    
T  38837696 cgctaattttgctttttctagtagtga 38837670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 141 - 272
Target Start/End: Complemental strand, 26708715 - 26708584
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  26708715 taaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaatt 26708616  T
Q  241 tccctctctaattttgctttttctaatagtga 272  Q
    |||||| |||||||||| ||||||| ||||||    
T  26708615 tccctcgctaattttgcattttctagtagtga 26708584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 141 - 272
Target Start/End: Complemental strand, 26978449 - 26978318
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  26978449 taaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaatt 26978350  T
Q  241 tccctctctaattttgctttttctaatagtga 272  Q
    |||||| |||||||||| ||||||| ||||||    
T  26978349 tccctcgctaattttgcattttctagtagtga 26978318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 746993 - 746875
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  746993 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 746894  T
Q  246 ctctaattttgctttttct 264  Q
    | |||||||||||||||||    
T  746893 cgctaattttgctttttct 746875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 7888807 - 7888936
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  7888807 aaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcaataattt 7888906  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  7888907 ccctcgctaattttgctttttctagtagtg 7888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 10494751 - 10494876
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10494751 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 10494850  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||  ||||||||||||| |||||    
T  10494851 cgctacatttgctttttctagtagtg 10494876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 12045737 - 12045866
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  12045737 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgaggaatttcattttttccgtcactaattt 12045836  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  12045837 ccctcgctaattttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 17039760 - 17039631
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17039760 aaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 17039661  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| |||||||||||||||||| |||||    
T  17039660 tcctcactaattttgctttttctagtagtg 17039631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 24138971 - 24138841
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||| ||||    
T  24138971 taaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaatt 24138872  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    | |||| ||||||||||||||||||||||||    
T  24138871 ttcctcgctaattttgctttttctaatagtg 24138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 25652712 - 25652582
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||| ||||    
T  25652712 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgaggaatttcattttttctgtcactgattt 25652613  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||||||||||    
T  25652612 ccctcgctaattttgctttttctaatagtga 25652582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 8886980 - 8886851
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||    
T  8886980 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacaaattt 8886881  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| |||||||||||||||||| |||||    
T  8886880 tcctcgctaattttgctttttctagtagtg 8886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 154 - 271
Target Start/End: Complemental strand, 16631991 - 16631874
Alignment:
Q  154 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaatt 253  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16631991 ggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 16631892  T
Q  254 ttgctttttctaatagtg 271  Q
    || ||||||||| |||||    
T  16631891 tttctttttctagtagtg 16631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 2472841 - 2472714
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2472841 atttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 2472742  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
     || |||||||||||||||||| |||||    
T  2472741 ttcactaattttgctttttctagtagtg 2472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 16121966 - 16121839
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  16121966 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaattttattttttccgtcactaatttcc 16121867  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||||||||||||||| |||||    
T  16121866 ctcgctaattttgctttttctagtagtg 16121839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 35620470 - 35620344
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  35620470 atttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattt-attttttccgtcactaatttcc 35620372  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| ||||||||||||||||||||||||    
T  35620371 ctcgctaattttgctttttctaatagtg 35620344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 8108989 - 8108859
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||| | |||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  8108989 aaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 8108890  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    |||||||||||||||||||||||| ||||||    
T  8108889 ccctctctaattttgctttttctagtagtga 8108859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 28265604 - 28265475
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  28265604 aaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattt 28265505  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| |||||||| ||||||||| |||||    
T  28265504 tcctcgctaattttactttttctagtagtg 28265475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 36196404 - 36196533
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||    
T  36196404 aaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttgtgaggaatttcattttttccgtcactaattt 36196503  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  36196504 ccctcgctaattttgctttttctagtagtg 36196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 23975645 - 23975765
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  23975645 aaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 23975744  T
Q  242 ccctctctaattttgcttttt 262  Q
    ||||| |||||||||||||||    
T  23975745 ccctcgctaattttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 5982655 - 5982785
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatt 240  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  5982655 aaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgaggaattccatttttttccgtcactaatt 5982754  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |||||| || ||||||||||||||| |||||    
T  5982755 tccctcgctgattttgctttttctagtagtg 5982785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 23408990 - 23409120
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatt 240  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||| ||||||||||||||||||    
T  23408990 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttttccgtcactaatt 23409089  T
Q  241 tccctctctaattttgctttttctaatagtg 271  Q
    |  ||| |||||||||||||||||| |||||    
T  23409090 tttctcgctaattttgctttttctagtagtg 23409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 36832019 - 36831889
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||| |||||| |||||||||||||||||| |||| |||||||    
T  36832019 aaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgaggaatttcatttttttcgtccctaattt 36831920  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||||||| ||||||    
T  36831919 ccctcactaattttgctttttctagtagtga 36831889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 33818690 - 33818561
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||    
T  33818690 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 33818591  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| | |||||||||||||||| |||||    
T  33818590 ccctccccaattttgctttttctagtagtg 33818561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 40484058 - 40484183
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | || ||||||||| ||||||||||||||||||||    
T  40484058 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatttccct 40484157  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||| ||||||||| |||||    
T  40484158 cgctaatttttctttttctagtagtg 40484183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 12328353 - 12328226
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||| |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||| ||||||||||    
T  12328353 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgttactaatttcc 12328254  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||| |||||||||||||||||| |||||    
T  12328253 ctcactaattttgctttttctagtagtg 12328226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 4125313 - 4125187
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||| || ||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  4125313 ttagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccct 4125214  T
Q  246 ctctaattttgctttttctaatagtga 272  Q
    | |||||||| ||||||||| ||||||    
T  4125213 cgctaattttactttttctagtagtga 4125187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 15060983 - 15061105
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||| ||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||    
T  15060983 aaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcggtcactaattt 15061082  T
Q  242 ccctctctaattttgctttttct 264  Q
    ||||| |||||||||||||||||    
T  15061083 ccctcgctaattttgctttttct 15061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 25397913 - 25397788
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||    
T  25397913 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatttccct 25397814  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | |||||||||||||| ||| |||||    
T  25397813 ccctaattttgcttttcctagtagtg 25397788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 143 - 271
Target Start/End: Complemental strand, 17036540 - 17036412
Alignment:
Q  143 aatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttc 242  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||    
T  17036540 aatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttatttcttccgtcactaatctc 17036441  T
Q  243 cctctctaattttgctttttctaatagtg 271  Q
     ||| |||||||||| ||||||| |||||    
T  17036440 gctccctaattttgcattttctagtagtg 17036412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 146 - 270
Target Start/End: Complemental strand, 17772093 - 17771969
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| ||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||    
T  17772093 ttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatttccct 17771994  T
Q  246 ctctaattttgctttttctaatagt 270  Q
    | || ||||| ||||||||| ||||    
T  17771993 cgctgatttttctttttctagtagt 17771969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 27428141 - 27428022
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | || ||||| ||||||| ||||||||||||    
T  27428141 aaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaattttatttttttcgtcactaattt 27428042  T
Q  242 ccctctctaattttgctttt 261  Q
    ||||| |||||||| |||||    
T  27428041 ccctccctaatttttctttt 27428022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 20188070 - 20187940
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||| ||||||||| |||| ||||||||||| |||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  20188070 aaatttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactaattt 20187971  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    || || |||||||||||||| ||||||||||    
T  20187970 ccttcgctaattttgcttttgctaatagtga 20187940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 36716329 - 36716200
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||| ||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  36716329 aaattttgtgagggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaatttgtgaggaatttcattttttccatcactaattt 36716230  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||||||| |||||    
T  36716229 ccctcgctaattttgttttttctagtagtg 36716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 17986741 - 17986862
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||| | ||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||     
T  17986741 atttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaatttgtgaagaatttcattttttccgtcactaatttct 17986840  T
Q  244 ctctctaattttgctttttcta 265  Q
    ||| |||||||| |||||||||    
T  17986841 ctcactaattttactttttcta 17986862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 20959518 - 20959647
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||| ||||||||||||| | ||||    
T  20959518 aaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaattttattttttccgtcagtgattt 20959617  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
     |||| |||||||| ||||||||| |||||    
T  20959618 tcctccctaattttactttttctagtagtg 20959647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 23423885 - 23423768
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||| |||||| |||||    
T  23423885 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgtttttcgtcacaaattt 23423786  T
Q  242 ccctctctaattttgctt 259  Q
    ||||| ||||||||||||    
T  23423785 ccctccctaattttgctt 23423768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 7003857 - 7003730
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||  |||||||||||||||||||    
T  7003857 aaattttgtgagggaaaacgtgaaatc--tctctaattccgtcactaaattttgcgatcatggaatttgtgaggaattttcttttttccgtcactaattt 7003760  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||||||| |||||    
T  7003759 ccctcgctaattttgttttttctagtagtg 7003730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 271
Target Start/End: Complemental strand, 11927912 - 11927786
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||| ||||||||| || |||||||  |    
T  11927912 tttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttattttttccatctctaatttatc 11927813  T
Q  245 tctctaattttgctttttctaatagtg 271  Q
    || ||||||||||||||||||||||||    
T  11927812 tccctaattttgctttttctaatagtg 11927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 13620256 - 13620127
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||||||||| ||||| |||||||||||||||  ||||||||||  |||| ||||||||||||||||||||    
T  13620256 aaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttattttttccgtcactaattt 13620157  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| || ||||| ||||||||| |||||    
T  13620156 ccctccctgatttttctttttctagtagtg 13620127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 13974207 - 13974078
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| |||||||||||| |||||||||||||||||  ||||||   ||||||||| |||||||||||||| |||| |||||||    
T  13974207 aaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgtgaagaatttcatttttttcgtcgctaattt 13974108  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||||||||||||| |||||    
T  13974107 ccctcgctaattttgctttttctagtagtg 13974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 145 - 256
Target Start/End: Complemental strand, 10420378 - 10420267
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||| | ||||||||||||||||  |||||||||||||||||||||  || |||||||| |||| |||||||||||||||||||||||    
T  10420378 tttagagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttattttttccgtcactaatttccc 10420279  T
Q  245 tctctaattttg 256  Q
    ||||||||||||    
T  10420278 tctctaattttg 10420267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 36597465 - 36597338
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| |||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||||||| || ||||||||||  |||||  ||    
T  36597465 ttagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatttttct 36597366  T
Q  246 ctctaattttgctttttctaatagtgag 273  Q
    | | |||||||||||||||| |||||||    
T  36597365 cccaaattttgctttttctagtagtgag 36597338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 255
Target Start/End: Complemental strand, 25673357 - 25673245
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||  |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  25673357 aaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgt-aggagttttattttttccgtcactaattt 25673259  T
Q  242 ccctctctaatttt 255  Q
     |||| ||||||||    
T  25673258 tcctccctaatttt 25673245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 33816887 - 33816786
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| |||||    
T  33816887 aaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacaaattt 33816788  T
Q  242 cc 243  Q
    ||    
T  33816787 cc 33816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 17079415 - 17079514
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    ||||||||  ||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||| |||||||||||| |||||||    
T  17079415 aaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttattttttccgtccctaattt 17079514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 32726855 - 32726736
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||| || ||||  ||||||||||||||||||||||||||||||||| |||||||| | |  ||| || |||||| ||||||||||    
T  32726855 aaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgtcaagggttttatattttccatcactaattt 32726756  T
Q  242 ccctctctaattttgctttt 261  Q
    | ||| ||||||||||||||    
T  32726755 cgctccctaattttgctttt 32726736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 3080825 - 3080695
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | ||||||||||| |||| | ||||||| ||||| ||| ||||||||||||||  |||| ||||||||| |||| |||||    
T  3080825 aaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgtgagagattttattttttccatcacgaattt 3080726  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||  |||||||||||||| ||||| ||||    
T  3080725 ccctacctaattttgcttttcctaatggtga 3080695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 33735076 - 33734974
Alignment:
Q  168 ccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaat 267  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||| |||| ||||||||| ||| |||||| |||| |||||||||||||| ||| |    
T  33735076 ccctctttaattccgtcactaaattttgcgaccaaggaatttatgagggattttattttttccctcattaattttcctccctaattttgcttttcctagt 33734977  T
Q  268 agt 270  Q
    |||    
T  33734976 agt 33734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 35778155 - 35778274
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||| | |||||||| ||| |||| || | |||||||||||||||| |||||||||||  |||| ||||||||| ||||||||||||||    
T  35778155 ttagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatttccct 35778254  T
Q  246 ctctaattttgctttttcta 265  Q
    | | |||||| |||||||||    
T  35778255 cccaaattttactttttcta 35778274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 23974703 - 23974576
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||| | |  ||||||||||||||| ||||| |||||||| |||| || |||||||||||  |||| |||||||||||||||||||| |    
T  23974703 atttagtgagggaaagcattcaatccctctctaatttcgtcattaaattttacgacaaaggaatttgtgagagattttattttttccgtcactaattttc 23974604  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||  |||||||| ||||| ||| |||||    
T  23974603 cttcctaatttttcttttcctagtagtg 23974576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 270
Target Start/End: Complemental strand, 16472310 - 16472182
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaa-ttttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    |||||||| |||| |||| ||  |||| ||||||||||| ||||||||| |||||||||||| |||||| ||| | |||| ||||||| || ||||||||    
T  16472310 aaatttagagaggaaaaaagtggaatcgctctctaattctgtcactaaacttttgcgaccaacgaatttttgaaggattttatttttttcgacactaatt 16472211  T
Q  241 tccctctctaattttgctttttctaatagt 270  Q
    | |||| | |||||||||||||||| ||||    
T  16472210 t-cctcccaaattttgctttttctagtagt 16472182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 5043640 - 5043541
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||| ||||||  |||| || ||||||||||| |||||||||||  ||| | | |||||||||| |||||||||||||| |||||||||||    
T  5043640 aaatttagagaggaaaaacgcgaaattcccctctaattccgccactaaattttatgacgataaaatttgtgagaaatttcattttttctgtcactaattt 5043541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 31853208 - 31853131
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttttt 228  Q
    |||| ||||| | ||||| |||||||||||||||||||||||||||||||| | ||||| ||||| |||| |||||||    
T  31853208 gaggaaaaacatgaaatctctctctaattccgtcactaaattttgcgaccataaaatttatgagggattttatttttt 31853131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 9024267 - 9024323
Alignment:
Q  185 actaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||||||||||||| ||||||  |||| |||| ||||||||||||||||||||    
T  9024267 actaaattttgcgaccaaggaatttacgagggattttattttttccgtcactaattt 9024323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 22649458 - 22649406
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaatttt 194  Q
    |||||||| |||||||||||| |||||| ||||||||||||||| ||||||||    
T  22649458 aaatttagagagggaaaacgtgaaatccttctctaattccgtcattaaatttt 22649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 19891025 - 19890986
Alignment:
Q  232 tcactaatttccctctctaattttgctttttctaatagtg 271  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  19891025 tcactaatttccctcgctaattttgctttttctaatagtg 19890986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 29727975 - 29727928
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaa 189  Q
    |||||| |||||||||||||| |||| |||||||||||||||||||||    
T  29727975 aaattttgcgagggaaaacgtgaaattcctctctaattccgtcactaa 29727928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 252
Target Start/End: Original strand, 18413566 - 18413676
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| || ||||| | ||||||||||  |||||||| |||| ||  || |||||||  |||| |||||||  |||||||||||    
T  18413566 aaatttagagagggaaaacgtgaattccctttttaattccgtcgttaaattttacgactaagaaacttgtgagtgattttattttttaagtcactaattt 18413665  T
Q  242 ccctctctaat 252  Q
      |||||||||    
T  18413666 ttctctctaat 18413676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 29727939 - 29727895
Alignment:
Q  227 ttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||    
T  29727939 ttccgtcactaatttccctcgctaattttactttttctagtagtg 29727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 16464723 - 16464768
Alignment:
Q  226 tttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    ||||||||||||||||||||| |||||||||| ||| ||| |||||    
T  16464723 tttccgtcactaatttccctccctaattttgcctttcctagtagtg 16464768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 6108 - 5979
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6108 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 6009  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||||||| |||||    
T  6008 ccctcgctaattttgttttttctagtagtg 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 141 - 265
Target Start/End: Complemental strand, 10793 - 10669
Alignment:
Q  141 taaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 240  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  10793 taaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatt 10694  T
Q  241 tccctctctaattttgctttttcta 265  Q
    |||||| ||||||||||||||||||    
T  10693 tccctcgctaattttgctttttcta 10669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 140 - 271
Target Start/End: Complemental strand, 15121 - 14990
Alignment:
Q  140 ttaaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaat 239  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| |||||||||    
T  15121 ttaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaat 15022  T
Q  240 ttccctctctaattttgctttttctaatagtg 271  Q
    ||||||| |||||||||||||||||| |||||    
T  15021 ttccctcgctaattttgctttttctagtagtg 14990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 142 - 270
Target Start/End: Original strand, 7515 - 7643
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||    
T  7515 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcactaattt 7614  T
Q  242 ccctctctaattttgctttttctaatagt 270  Q
    ||||| |||||||||||||||||| ||||    
T  7615 ccctcgctaattttgctttttctagtagt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 19615 - 19742
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19615 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 19714  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
    ||  |||||||||||||||||| |||||    
T  19715 cttgctaattttgctttttctagtagtg 19742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 84799 - 84680
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  84799 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatttccct 84700  T
Q  246 ctctaattttgctttttcta 265  Q
    | ||||||||||||||||||    
T  84699 cactaattttgctttttcta 84680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 145 - 271
Target Start/End: Complemental strand, 121113 - 120987
Alignment:
Q  145 tttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccc 244  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||||| | | |||||||||||    
T  121113 tttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaattttatttttttcataactaatttccc 121014  T
Q  245 tctctaattttgctttttctaatagtg 271  Q
    ||||||||||| |||||| || |||||    
T  121013 tctctaattttactttttttagtagtg 120987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 43927 - 44056
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| ||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43927 aaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaattt 44026  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||| ||||||||| |||||    
T  44027 ccctcgctaatttttctttttctagtagtg 44056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 94; Significance: 8e-46; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 8237 - 8116
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  8237 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcattaatttcc 8138  T
Q  244 ctctctaattttgctttttcta 265  Q
    ||| ||||||||||||||||||    
T  8137 ctcgctaattttgctttttcta 8116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 21969 - 21848
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  21969 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcattaatttcc 21870  T
Q  244 ctctctaattttgctttttcta 265  Q
    ||| ||||||||||||||||||    
T  21869 ctcgctaattttgctttttcta 21848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 84313 - 84442
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | ||||||||| || |||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||||    
T  84313 aaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 84412  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||  |||||||||||||||||| |||||    
T  84413 cccttgctaattttgctttttctagtagtg 84442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 146 - 270
Target Start/End: Original strand, 182544 - 182668
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  182544 ttagtgagggaaattgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccct 182643  T
Q  246 ctctaattttgctttttctaatagt 270  Q
    | |||||||| ||||||||| ||||    
T  182644 cgctaattttactttttctagtagt 182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 219648 - 219775
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 243  Q
    |||||| |||||||||| | |||||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||    
T  219648 atttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatttcattttttccgtcactaatttcc 219747  T
Q  244 ctctctaattttgctttttctaatagtg 271  Q
     || |||||||||||||||||| |||||    
T  219748 gtcgctaattttgctttttctagtagtg 219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 215781 - 215663
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| |||||||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||||||||||||||| |||||||| ||    
T  215781 ttagtgagggaaaacgtaaaatccctctctaattccgta-------tttgcgaccaaggaatttgtgaggaatttcattttttccgtcgctaatttctct 215689  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
    | ||||||||||||||| || |||||    
T  215688 cgctaattttgctttttttagtagtg 215663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 263
Target Start/End: Original strand, 12663 - 12783
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  12663 aaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaatttatgaggaatttcattttttccgtcactaattt 12761  T
Q  242 ccctctctaattttgctttttc 263  Q
    ||||| ||||||||||||||||    
T  12762 ccctcgctaattttgctttttc 12783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 144 - 274
Target Start/End: Original strand, 173456 - 173587
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaa--tttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||||||||||    
T  173456 atttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcattttttccgtcactaattt 173555  T
Q  242 ccctctctaattttgctttttctaatagtgaga 274  Q
     |||| |||||||||||||||||||||||||||    
T  173556 -cctcgctaattttgctttttctaatagtgaga 173587  T

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Target: scaffold0717 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 1046 - 918
Alignment:
Q  144 atttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttca-ttttttccgtcactaatttc 242  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | |||||||||||| |||||||    
T  1046 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaattttatttttttccgtcagtaatttc 947  T
Q  243 cctctctaattttgctttttctaatagtg 271  Q
    |||| |||||||||||||||||| |||||    
T  946 cctcgctaattttgctttttctagtagtg 918  T

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Target: scaffold0087 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 37916 - 37786
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||| | |||||||||| | |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  37916 aaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccgtcactaattt 37817  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    |||   ||||||||| |||||||| ||||||    
T  37816 cccctgctaattttgttttttctagtagtga 37786  T

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Target: scaffold0047 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 58592 - 58722
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||||||| |||||    
T  58592 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgaggaattttatgttttccgtcacaaattt 58691  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    ||||| |||||||||||||| ||| ||||||    
T  58692 ccctccctaattttgcttttcctagtagtga 58722  T

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Target: scaffold0002 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 439977 - 440102
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 245  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| | |||    
T  439977 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatattcct 440076  T
Q  246 ctctaattttgctttttctaatagtg 271  Q
      |||||||| ||||||||| |||||    
T  440077 tgctaattttactttttctagtagtg 440102  T

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Target: scaffold0023 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 151 - 271
Target Start/End: Complemental strand, 39823 - 39703
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||   |||||| ||||||||||||||||||| ||||||||||||||| |||    
T  39823 gagggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgggaggaatttcattttttccatcactaatttccctcgcta 39724  T
Q  251 attttgctttttctaatagtg 271  Q
    ||||||||||||||| |||||    
T  39723 attttgctttttctagtagtg 39703  T

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Target: scaffold0069 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 10168 - 10287
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||  |||||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||| |||||    
T  10168 aaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgttttccgtcacaaattt 10267  T
Q  242 ccctctctaattttgctttt 261  Q
    ||||| ||||||||||||||    
T  10268 ccctccctaattttgctttt 10287  T

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Target: scaffold0058 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 74670 - 74541
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||||||| |||||    
T  74670 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaattttatgttttccgtcacaaattt 74571  T
Q  242 ccctctctaattttgctttttctaatagtg 271  Q
    ||||| |||||||| ||||| ||| |||||    
T  74570 ccctccctaattttacttttcctagtagtg 74541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 7466 - 7589
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||| |||||||| || || ||||||| |||||||||||||||||||||||||||    
T  7466 aaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcattttttccgtcactaattt 7565  T
Q  242 ccctctctaattttgctttttcta 265  Q
     ||||  ||||||| |||||||||    
T  7566 tcctcgttaattttactttttcta 7589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 74845 - 74723
Alignment:
Q  144 atttagcgagggaaaa-cgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttc 242  Q
    |||||| ||||||||| | | ||||||||||||||||| ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  74845 atttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgagaaatttcattttttccgtcactaatttc 74746  T
Q  243 cctctctaattttgctttttcta 265  Q
    |||  |||||||||| |||||||    
T  74745 ccttgctaattttgccttttcta 74723  T

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Target: scaffold0655 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 151 - 271
Target Start/End: Complemental strand, 3282 - 3162
Alignment:
Q  151 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctcta 250  Q
    |||||||||||| ||||||||| ||||||| ||||||||||||||||||||   ||||||||||||| || || |||||||||||||||||||||| |||    
T  3282 gagggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaactttatcttttccgtcactaatttccctcccta 3183  T
Q  251 attttgctttttctaatagtg 271  Q
    ||||| ||||||||| |||||    
T  3182 atttttctttttctattagtg 3162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 6805 - 6928
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||| |||||||||| | |||| ||||||||||||||||| |||||||||| || ||  |||||| || |||||||||||||||||||| ||||||    
T  6805 aaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaatttgcgaagaatttcattttttccgtcaataattt 6904  T
Q  242 ccctctctaattttgctttttcta 265  Q
    ||||| ||||||||||||||||||    
T  6905 ccctcgctaattttgctttttcta 6928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 17705 - 17617
Alignment:
Q  183 tcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  17705 tcactaaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 17617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 10902 - 11032
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||||||  |||| ||||| | |||| |||||||||||| |||||||||||||| |||||| ||||||||||||||||| || |||| |||||| |||||    
T  10902 aaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgtgaggaattttatatttttcgtcacaaattt 11001  T
Q  242 ccctctctaattttgctttttctaatagtga 272  Q
    || || |||||||||||||| |||| |||||    
T  11002 ccttccctaattttgcttttcctaacagtga 11032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 9882 - 9949
Alignment:
Q  204 gaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagtg 271  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||| |||||    
T  9882 gaatttgtgagaaatttcattttttccttcactaatttcactcgctaattttgctttttctagtagtg 9949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 1644 - 1549
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| |||||| ||| | ||| ||||||||||||  || |||||||||||||||||| |||||| ||||| |||| ||||||||||||||||||||    
T  1644 ttagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtcactaattt 1549  T

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Target: scaffold0114 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 36316 - 36411
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| |||||| ||| | ||||| ||||||||||  || ||||||||||| |||||| |||||| ||| | |||| ||||||||||||||||||||    
T  36316 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgtgaccaaggaatttatgatggattttattttttccgtcactaattt 36411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 22145 - 22228
Alignment:
Q  187 taaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagt 270  Q
    |||| ||||||| |||| ||||| |||| ||||| ||||||||| ||||||||||||||| || |||||| |||| ||||||||    
T  22145 taaagtttgcgatcaaaaaatttatgagaaattttattttttccctcactaatttccctccctgattttgtttttcctaatagt 22228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 34197 - 34284
Alignment:
Q  183 tcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctaatagt 270  Q
    |||||||| ||| |||||||  |||||||||| ||||| ||||||||| ||| ||||||| |||  | ||||||||||| ||||||||    
T  34197 tcactaaagtttacgaccaataaatttgtgagaaattttattttttccctcattaatttcgctccttgattttgcttttcctaatagt 34284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 112338 - 112398
Alignment:
Q  142 aaatttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 202  Q
    ||||| || |||| ||||||| |||||||||||||||||||||| |||||||||| |||||    
T  112338 aaattcagagaggaaaaacgttaaatccctctctaattccgtcattaaattttgcaaccaa 112398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 19263 - 19168
Alignment:
Q  146 ttagcgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 241  Q
    |||| |||||| ||| | ||||||||||||||||  ||  |||||||||||||||||  || || ||||  |||| ||||||||||||| ||||||    
T  19263 ttagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaagaaaattatgagagattttattttttccgtcattaattt 19168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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