View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5494_high_8 (Length: 308)
Name: NF5494_high_8
Description: NF5494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5494_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 30173183 - 30172897
Alignment:
| Q |
1 |
tttcaataacaatgtgatcaaatttgtctcttttcttcctaaccaactccaacagcattttaactagatctcctcgcacagtgcagcataggcagccatt |
100 |
Q |
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| T |
30173183 |
tttcaataacaatgtgatcaaatttgtctcttttcttcctaaccaactccaacagcattttaactagatctcctcgcacagtgcagcataggcagccatt |
30173084 |
T |
|
| Q |
101 |
attgaccatgataatgtcttcaccattcacagaagaatggctagcaaccagtgatccatcaatatcaacctcaccaaactgcattattcacaacaaaata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30173083 |
attgaccatgataatgtcttcaccattcacagaagaatggctagcaaccagtgatccatcaatatcaacctcaccaaactgcattattcacaacaaaata |
30172984 |
T |
|
| Q |
201 |
atttcatgaaaaactgtaaatccgtattataataagacaatcaaattcttccctcattttacaatttctctacaaaacaaactcgatac |
289 |
Q |
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| T |
30172983 |
atttcatgaaaaactgtaaatccgtattata--aagacaatcaaattcttccctcattttacaatttatctacaaaacaaactcgatac |
30172897 |
T |
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