View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5498-Insertion-7 (Length: 353)
Name: NF5498-Insertion-7
Description: NF5498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5498-Insertion-7 |
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Alignment Details
Target: chr7 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 8 - 350
Target Start/End: Original strand, 1781913 - 1782255
Alignment:
| Q |
8 |
cacataacctttgaacatgtacatcctacatgctgacttcgtgagaccctcaaaacttttcactaccaagagaaataataaagtagcaagggggtctcct |
107 |
Q |
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| T |
1781913 |
cacataacctttgaacatgtacatcctacatgctgacttcgtgagaccctcaaaacttttcactaccaagagaaataataaagtagcaagggggtctcct |
1782012 |
T |
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| Q |
108 |
tgtttaggcctctttgtcgagatttcccctataggacaaccaattaccaaaactaacaaattatttgtacaaatacaagtcttcatccatttaatccaaa |
207 |
Q |
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| T |
1782013 |
tgtttaggcctctttgtcgagatttcccctataggacaaccaattaccaaaactaacaaattatttgtacaaatacaagtcttcatccatttaatccaaa |
1782112 |
T |
|
| Q |
208 |
accaaaccttcccagcatatagtccaaaaaagtccaatccaccaggtcataagtttaatcaaatttcacaattaacatcaagtagtttttcccccacttc |
307 |
Q |
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| T |
1782113 |
accaaaccttcccagcatatagtccaaaaaagtccaatccaccaggtcataagtttaattaaatttcacaattaacatcaagtagtttttcccccacttc |
1782212 |
T |
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| Q |
308 |
atcctcctcgcatctgtaagtgagaaaaacacaagaaaagggt |
350 |
Q |
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| T |
1782213 |
atcctcctcgcatctgaaggtgagaaaaacacaagaagagggt |
1782255 |
T |
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