View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5499-Insertion-1 (Length: 1020)

Name: NF5499-Insertion-1
Description: NF5499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5499-Insertion-1
NF5499-Insertion-1
[»] chr7 (48 HSPs)
chr7 (504-835)||(4230560-4230895)
chr7 (504-835)||(1641467-1641804)
chr7 (504-818)||(22291933-22292251)
chr7 (504-818)||(43350196-43350514)
chr7 (562-831)||(3379849-3380123)
chr7 (46-265)||(4230253-4230485)
chr7 (504-818)||(42736078-42736395)
chr7 (504-818)||(17184287-17184604)
chr7 (536-818)||(15900224-15900496)
chr7 (537-691)||(48271771-48271926)
chr7 (540-746)||(34141974-34142181)
chr7 (537-742)||(41623201-41623407)
chr7 (537-690)||(42504310-42504464)
chr7 (583-679)||(45362239-45362335)
chr7 (545-631)||(20877018-20877105)
chr7 (537-742)||(42683523-42683732)
chr7 (537-679)||(46861141-46861284)
chr7 (537-690)||(9366172-9366326)
chr7 (537-746)||(17840319-17840529)
chr7 (537-690)||(20565759-20565913)
chr7 (537-746)||(28978112-28978322)
chr7 (706-815)||(20876855-20876964)
chr7 (537-672)||(21186247-21186383)
chr7 (583-746)||(40589904-40590067)
chr7 (575-744)||(48194123-48194293)
chr7 (537-667)||(36392779-36392910)
chr7 (523-664)||(16885959-16886100)
chr7 (366-475)||(4230424-4230533)
chr7 (56-190)||(1642207-1642342)
chr7 (574-664)||(28113367-28113458)
chr7 (537-746)||(34157800-34158009)
chr7 (51-137)||(3380564-3380650)
chr7 (523-597)||(41934486-41934560)
chr7 (205-397)||(151095-151288)
chr7 (349-458)||(20877182-20877291)
chr7 (537-664)||(10225190-10225318)
chr7 (227-429)||(151090-151293)
chr7 (195-241)||(21613932-21613978)
chr7 (349-458)||(17184160-17184269)
chr7 (205-294)||(18150313-18150402)
chr7 (296-373)||(20877213-20877290)
chr7 (509-612)||(27316969-27317073)
chr7 (323-382)||(17184161-17184220)
chr7 (214-268)||(21613846-21613900)
chr7 (216-265)||(1641878-1641927)
chr7 (151-188)||(2356842-2356879)
chr7 (352-397)||(4230437-4230482)
chr7 (244-309)||(15900608-15900673)
[»] chr4 (101 HSPs)
chr4 (504-835)||(4910418-4910756)
chr4 (504-835)||(21410766-21411099)
chr4 (8-253)||(31324626-31324871)
chr4 (523-824)||(9718363-9718664)
chr4 (504-804)||(21412347-21412649)
chr4 (504-818)||(21170566-21170881)
chr4 (8-282)||(13866717-13867002)
chr4 (530-835)||(17292780-17293078)
chr4 (504-818)||(51026593-51026911)
chr4 (504-818)||(2774107-2774424)
chr4 (51-202)||(13854988-13855139)
chr4 (545-814)||(49816223-49816495)
chr4 (504-750)||(36775358-36775605)
chr4 (504-668)||(25145619-25145784)
chr4 (504-818)||(45940628-45940946)
chr4 (545-818)||(43888298-43888572)
chr4 (296-475)||(4910783-4910962)
chr4 (504-678)||(49790877-49791052)
chr4 (504-669)||(24076212-24076378)
chr4 (347-475)||(9718188-9718316)
chr4 (583-746)||(34528697-34528860)
chr4 (537-746)||(34152164-34152373)
chr4 (240-373)||(4910831-4910964)
chr4 (582-746)||(49422635-49422799)
chr4 (540-746)||(56140016-56140224)
chr4 (583-746)||(49572267-49572430)
chr4 (537-690)||(41793857-41794011)
chr4 (540-746)||(1043846-1044053)
chr4 (644-818)||(47873261-47873438)
chr4 (574-679)||(956398-956504)
chr4 (537-690)||(6176370-6176524)
chr4 (537-690)||(21016232-21016386)
chr4 (593-746)||(44559205-44559357)
chr4 (205-345)||(4910832-4910972)
chr4 (213-397)||(23620093-23620277)
chr4 (539-746)||(37867572-37867780)
chr4 (205-268)||(13867150-13867213)
chr4 (583-690)||(39589926-39590033)
chr4 (537-679)||(49095743-49095886)
chr4 (351-458)||(43888638-43888745)
chr4 (537-679)||(55797741-55797884)
chr4 (537-746)||(6281400-6281612)
chr4 (12-138)||(13850977-13851103)
chr4 (12-138)||(13866491-13866617)
chr4 (213-426)||(23620091-23620304)
chr4 (582-667)||(42887445-42887530)
chr4 (537-746)||(51427079-51427289)
chr4 (46-138)||(18413035-18413127)
chr4 (205-292)||(4910831-4910918)
chr4 (592-679)||(40352842-40352929)
chr4 (205-307)||(23620156-23620258)
chr4 (205-263)||(24076088-24076146)
chr4 (374-475)||(21411130-21411231)
chr4 (374-475)||(21412214-21412315)
chr4 (574-665)||(4784301-4784393)
chr4 (205-265)||(13855356-13855416)
chr4 (227-307)||(24076056-24076136)
chr4 (367-454)||(25145495-25145582)
chr4 (347-412)||(4784549-4784614)
chr4 (324-397)||(24076072-24076145)
chr4 (773-818)||(36775267-36775312)
chr4 (349-458)||(49791068-49791177)
chr4 (216-284)||(4784542-4784610)
chr4 (232-304)||(9718181-9718253)
chr4 (774-818)||(14969099-14969143)
chr4 (545-740)||(17054303-17054499)
chr4 (318-385)||(9718186-9718253)
chr4 (201-268)||(13866975-13867042)
chr4 (775-818)||(17045601-17045644)
chr4 (338-441)||(24076059-24076162)
chr4 (504-583)||(47871154-47871233)
chr4 (195-241)||(3394077-3394123)
chr4 (238-304)||(4784549-4784615)
chr4 (323-385)||(4784549-4784611)
chr4 (375-429)||(4910910-4910964)
chr4 (216-282)||(9718192-9718258)
chr4 (259-376)||(13866924-13867042)
chr4 (349-458)||(2773980-2774089)
chr4 (582-667)||(9490631-9490716)
chr4 (323-372)||(9718218-9718267)
chr4 (324-397)||(43888672-43888745)
chr4 (349-458)||(47871027-47871136)
chr4 (204-264)||(23620091-23620151)
chr4 (213-281)||(24076069-24076137)
chr4 (348-387)||(4910925-4910964)
chr4 (205-264)||(9718208-9718267)
chr4 (205-268)||(13855442-13855505)
chr4 (205-284)||(23620125-23620204)
chr4 (214-253)||(28170942-28170981)
chr4 (51-138)||(31324402-31324488)
chr4 (219-253)||(3394161-3394195)
chr4 (366-424)||(9718180-9718238)
chr4 (195-241)||(17212043-17212089)
chr4 (773-818)||(22437990-22438036)
chr4 (195-241)||(24607742-24607788)
chr4 (773-818)||(2567850-2567895)
chr4 (161-202)||(9717884-9717925)
chr4 (349-458)||(21170426-21170535)
chr4 (56-125)||(23620432-23620501)
chr4 (214-255)||(24607820-24607861)
chr4 (351-396)||(28170934-28170979)
[»] chr1 (69 HSPs)
chr1 (504-824)||(16530998-16531313)
chr1 (51-454)||(14771933-14772343)
chr1 (504-818)||(37779233-37779548)
chr1 (504-818)||(23343604-23343919)
chr1 (504-818)||(35186088-35186406)
chr1 (504-818)||(39856048-39856366)
chr1 (504-818)||(15355590-15355907)
chr1 (504-818)||(38044009-38044327)
chr1 (504-820)||(17685135-17685452)
chr1 (504-737)||(35585791-35586025)
chr1 (504-818)||(24269177-24269490)
chr1 (505-818)||(49260484-49260801)
chr1 (51-193)||(31451709-31451851)
chr1 (545-818)||(12790078-12790352)
chr1 (504-620)||(31451459-31451576)
chr1 (545-818)||(40532182-40532459)
chr1 (537-746)||(49925325-49925535)
chr1 (545-746)||(29437062-29437262)
chr1 (537-679)||(41803346-41803489)
chr1 (537-667)||(42570746-42570877)
chr1 (592-746)||(49428515-49428669)
chr1 (582-673)||(14172709-14172800)
chr1 (540-690)||(51270926-51271077)
chr1 (504-636)||(14771761-14771894)
chr1 (582-679)||(26634151-26634248)
chr1 (537-747)||(13974046-13974258)
chr1 (574-746)||(36911037-36911212)
chr1 (537-667)||(24363022-24363153)
chr1 (537-667)||(26494578-26494709)
chr1 (593-744)||(44336796-44336947)
chr1 (537-746)||(48227631-48227841)
chr1 (574-746)||(29761058-29761229)
chr1 (582-691)||(35525129-35525237)
chr1 (537-672)||(18974431-18974567)
chr1 (537-672)||(46142405-46142541)
chr1 (338-441)||(19261672-19261775)
chr1 (401-475)||(31451609-31451683)
chr1 (504-604)||(19261523-19261624)
chr1 (205-292)||(11788435-11788522)
chr1 (540-679)||(27485666-27485805)
chr1 (323-382)||(38044394-38044453)
chr1 (323-397)||(12790438-12790512)
chr1 (349-458)||(12790404-12790513)
chr1 (349-458)||(35185949-35186058)
chr1 (227-319)||(11788435-11788527)
chr1 (537-664)||(13634377-13634505)
chr1 (46-138)||(16081728-16081820)
chr1 (592-667)||(6436896-6436971)
chr1 (195-241)||(5766242-5766288)
chr1 (323-397)||(40532570-40532644)
chr1 (349-458)||(39856384-39856493)
chr1 (349-458)||(49260831-49260940)
chr1 (534-633)||(13284577-13284677)
chr1 (66-138)||(18842918-18842989)
chr1 (318-378)||(24363292-24363352)
chr1 (773-805)||(35585738-35585770)
chr1 (65-108)||(16097790-16097833)
chr1 (775-818)||(17373643-17373686)
chr1 (347-398)||(24363299-24363350)
chr1 (773-824)||(26494799-26494849)
chr1 (318-392)||(17373446-17373520)
chr1 (323-385)||(17685526-17685588)
chr1 (366-424)||(24363300-24363358)
chr1 (232-282)||(24363307-24363357)
chr1 (367-424)||(17373441-17373498)
chr1 (230-271)||(17373466-17373507)
chr1 (349-458)||(17685480-17685589)
chr1 (349-458)||(37779097-37779206)
chr1 (349-458)||(38044345-38044454)
[»] chr3 (78 HSPs)
chr3 (504-824)||(20374778-20375098)
chr3 (534-824)||(27096491-27096782)
chr3 (504-818)||(11377785-11378103)
chr3 (504-818)||(34470865-34471183)
chr3 (533-818)||(49274543-49274832)
chr3 (608-821)||(18441574-18441793)
chr3 (608-821)||(19486648-19486867)
chr3 (504-827)||(51012081-51012408)
chr3 (504-818)||(44928555-44928873)
chr3 (535-744)||(34646102-34646312)
chr3 (504-818)||(10052161-10052478)
chr3 (504-818)||(51016383-51016698)
chr3 (523-818)||(14632582-14632880)
chr3 (504-818)||(50458054-50458372)
chr3 (504-713)||(50341353-50341564)
chr3 (537-746)||(13894784-13894993)
chr3 (537-746)||(45099348-45099558)
chr3 (504-818)||(46413092-46413411)
chr3 (523-815)||(30193649-30193942)
chr3 (537-746)||(43570995-43571206)
chr3 (540-746)||(51694433-51694640)
chr3 (60-307)||(18441215-18441468)
chr3 (60-307)||(19486289-19486542)
chr3 (534-746)||(55205821-55206033)
chr3 (540-746)||(43478143-43478350)
chr3 (537-690)||(49139107-49139261)
chr3 (537-746)||(52568319-52568528)
chr3 (537-690)||(54391454-54391608)
chr3 (582-746)||(7247218-7247383)
chr3 (374-459)||(50341608-50341693)
chr3 (537-679)||(2429597-2429740)
chr3 (644-818)||(42322212-42322389)
chr3 (537-663)||(55268041-55268168)
chr3 (537-690)||(2645929-2646083)
chr3 (537-690)||(34050739-34050893)
chr3 (537-690)||(46406017-46406171)
chr3 (592-679)||(36136082-36136169)
chr3 (537-690)||(3494077-3494231)
chr3 (582-746)||(46345483-46345648)
chr3 (574-690)||(49217682-49217799)
chr3 (737-825)||(27188352-27188440)
chr3 (583-667)||(34692260-34692344)
chr3 (592-679)||(4003218-4003305)
chr3 (592-690)||(2267538-2267636)
chr3 (582-664)||(41579084-41579166)
chr3 (574-663)||(49611304-49611394)
chr3 (212-281)||(18441400-18441469)
chr3 (212-281)||(19486474-19486543)
chr3 (195-241)||(6754963-6755009)
chr3 (195-253)||(15637564-15637622)
chr3 (530-618)||(17371773-17371862)
chr3 (349-458)||(44928428-44928537)
chr3 (324-388)||(18441404-18441468)
chr3 (324-388)||(19486478-19486542)
chr3 (351-414)||(18441404-18441467)
chr3 (351-414)||(19486478-19486541)
chr3 (535-673)||(27188199-27188338)
chr3 (160-202)||(20375485-20375527)
chr3 (376-458)||(30193520-30193602)
chr3 (214-292)||(50341640-50341718)
chr3 (773-818)||(47759756-47759801)
chr3 (349-458)||(51012428-51012537)
chr3 (46-138)||(25887280-25887372)
chr3 (405-453)||(43688587-43688635)
chr3 (347-458)||(11378121-11378232)
chr3 (258-368)||(18441364-18441475)
chr3 (258-368)||(19486438-19486549)
chr3 (323-382)||(44928429-44928488)
chr3 (200-238)||(7955339-7955377)
chr3 (195-241)||(8629503-8629549)
chr3 (339-424)||(18441364-18441450)
chr3 (339-424)||(19486438-19486524)
chr3 (376-454)||(43478005-43478083)
chr3 (349-455)||(51016244-51016350)
chr3 (323-397)||(51016245-51016319)
chr3 (769-819)||(55205763-55205813)
chr3 (89-138)||(6464015-6464064)
chr3 (175-208)||(25887197-25887230)
[»] chr2 (54 HSPs)
chr2 (523-818)||(6977938-6978234)
chr2 (504-766)||(15890832-15891093)
chr2 (51-265)||(15891143-15891362)
chr2 (535-831)||(33404869-33405166)
chr2 (504-818)||(24107576-24107891)
chr2 (523-737)||(16413162-16413376)
chr2 (505-816)||(34520522-34520837)
chr2 (523-817)||(17537714-17538012)
chr2 (537-746)||(43492575-43492785)
chr2 (537-744)||(41497999-41498207)
chr2 (537-746)||(16582925-16583137)
chr2 (547-818)||(37311446-37311720)
chr2 (537-744)||(19470502-19470710)
chr2 (513-739)||(28272515-28272741)
chr2 (593-746)||(23408893-23409047)
chr2 (523-673)||(5421244-5421395)
chr2 (537-746)||(2918243-2918453)
chr2 (537-667)||(35492647-35492778)
chr2 (537-690)||(3936356-3936510)
chr2 (537-690)||(28476507-28476661)
chr2 (537-690)||(43983727-43983881)
chr2 (706-818)||(23719904-23720016)
chr2 (537-690)||(17425791-17425945)
chr2 (537-690)||(22002827-22002981)
chr2 (592-746)||(3942558-3942712)
chr2 (582-672)||(40676371-40676461)
chr2 (366-436)||(15891134-15891204)
chr2 (509-793)||(20989350-20989632)
chr2 (257-363)||(28745830-28745936)
chr2 (592-690)||(39798920-39799018)
chr2 (509-597)||(18333538-18333626)
chr2 (205-313)||(28745826-28745934)
chr2 (349-454)||(5421097-5421202)
chr2 (349-458)||(24107919-24108028)
chr2 (205-262)||(28745823-28745880)
chr2 (232-292)||(15891143-15891203)
chr2 (509-572)||(12764505-12764568)
chr2 (51-138)||(15891534-15891621)
chr2 (51-138)||(31991823-31991910)
chr2 (347-397)||(15891146-15891196)
chr2 (349-458)||(17538065-17538174)
chr2 (160-193)||(20148696-20148729)
chr2 (227-292)||(28272780-28272845)
chr2 (230-343)||(28745823-28745936)
chr2 (227-319)||(18333393-18333485)
chr2 (205-265)||(28272780-28272840)
chr2 (644-739)||(14913038-14913133)
chr2 (318-373)||(15891143-15891198)
chr2 (51-138)||(27650314-27650401)
chr2 (195-241)||(6902598-6902644)
chr2 (227-292)||(12764378-12764443)
chr2 (606-672)||(23786740-23786806)
chr2 (288-398)||(28745822-28745932)
chr2 (296-373)||(24107950-24108027)
[»] chr6 (68 HSPs)
chr6 (523-818)||(12397902-12398200)
chr6 (7-253)||(14482318-14482576)
chr6 (512-818)||(32133475-32133782)
chr6 (505-672)||(20241304-20241472)
chr6 (8-169)||(20241718-20241879)
chr6 (505-672)||(22135288-22135456)
chr6 (8-169)||(22135702-22135863)
chr6 (505-672)||(22142641-22142809)
chr6 (8-169)||(22143055-22143216)
chr6 (504-746)||(14123794-14124036)
chr6 (323-462)||(20241513-20241652)
chr6 (323-462)||(22135497-22135636)
chr6 (323-462)||(22142850-22142989)
chr6 (504-739)||(30763864-30764103)
chr6 (504-669)||(33201368-33201534)
chr6 (257-441)||(30764140-30764324)
chr6 (213-373)||(30764154-30764314)
chr6 (227-397)||(30764157-30764327)
chr6 (537-746)||(32026502-32026712)
chr6 (537-746)||(32036561-32036771)
chr6 (537-690)||(27641176-27641330)
chr6 (530-739)||(21863798-21864012)
chr6 (537-690)||(6206486-6206640)
chr6 (537-690)||(11693453-11693607)
chr6 (537-672)||(13616852-13616988)
chr6 (540-690)||(29067597-29067748)
chr6 (540-690)||(29109186-29109337)
chr6 (7-138)||(20241973-20242104)
chr6 (7-138)||(22135957-22136088)
chr6 (7-138)||(22143310-22143441)
chr6 (720-835)||(20241158-20241279)
chr6 (244-397)||(20241551-20241704)
chr6 (720-835)||(22135142-22135263)
chr6 (244-397)||(22135535-22135688)
chr6 (720-835)||(22142495-22142616)
chr6 (244-397)||(22142888-22143041)
chr6 (537-743)||(13403930-13404137)
chr6 (51-138)||(20192550-20192637)
chr6 (230-345)||(20241549-20241664)
chr6 (230-345)||(22135533-22135648)
chr6 (230-345)||(22142886-22143001)
chr6 (555-636)||(17464486-17464568)
chr6 (224-373)||(20241548-20241697)
chr6 (224-373)||(22135532-22135681)
chr6 (224-373)||(22142885-22143034)
chr6 (732-835)||(17464339-17464443)
chr6 (537-672)||(34802136-34802272)
chr6 (325-424)||(20241578-20241677)
chr6 (325-424)||(22135562-22135661)
chr6 (325-424)||(22142915-22143014)
chr6 (205-307)||(20241560-20241662)
chr6 (205-307)||(22135544-22135646)
chr6 (205-307)||(22142897-22142999)
chr6 (516-664)||(14485937-14486085)
chr6 (513-636)||(11181810-11181933)
chr6 (325-429)||(20241600-20241704)
chr6 (325-429)||(22135584-22135688)
chr6 (325-429)||(22142937-22143041)
chr6 (51-138)||(14482713-14482799)
chr6 (537-679)||(32691655-32691798)
chr6 (205-291)||(21864106-21864192)
chr6 (195-237)||(23911537-23911579)
chr6 (323-382)||(12397757-12397816)
chr6 (338-453)||(21864079-21864194)
chr6 (227-318)||(21864106-21864197)
chr6 (214-253)||(23911615-23911654)
chr6 (51-138)||(34134883-34134969)
chr6 (537-631)||(35020249-35020343)
[»] scaffold0859 (3 HSPs)
scaffold0859 (523-824)||(1442-1751)
scaffold0859 (403-475)||(1322-1394)
scaffold0859 (222-265)||(1303-1346)
[»] chr5 (56 HSPs)
chr5 (504-818)||(7484297-7484615)
chr5 (504-818)||(4722898-4723211)
chr5 (56-255)||(18921354-18921563)
chr5 (504-818)||(6792251-6792569)
chr5 (545-818)||(1695936-1696213)
chr5 (537-746)||(3602461-3602670)
chr5 (504-739)||(7400798-7401033)
chr5 (684-835)||(13130188-13130340)
chr5 (545-812)||(36349114-36349384)
chr5 (504-691)||(1972464-1972652)
chr5 (537-746)||(18309379-18309590)
chr5 (504-609)||(8531299-8531405)
chr5 (509-636)||(31239097-31239225)
chr5 (537-672)||(20199459-20199595)
chr5 (540-746)||(25499203-25499410)
chr5 (592-690)||(6286-6384)
chr5 (537-690)||(19035731-19035885)
chr5 (227-413)||(31238789-31238974)
chr5 (536-746)||(35566389-35566600)
chr5 (537-672)||(35927034-35927168)
chr5 (537-679)||(34682874-34683017)
chr5 (773-835)||(23190377-23190439)
chr5 (530-664)||(10978403-10978538)
chr5 (592-679)||(11347856-11347943)
chr5 (592-690)||(27660433-27660531)
chr5 (216-467)||(31238804-31239056)
chr5 (537-679)||(1399248-1399391)
chr5 (51-134)||(2599483-2599566)
chr5 (537-690)||(11028447-11028601)
chr5 (213-359)||(31238828-31238974)
chr5 (592-673)||(8539032-8539113)
chr5 (537-689)||(30710599-30710752)
chr5 (592-672)||(8575215-8575295)
chr5 (205-313)||(31238847-31238955)
chr5 (205-292)||(8531465-8531552)
chr5 (51-138)||(17195252-17195339)
chr5 (537-667)||(38855154-38855285)
chr5 (68-138)||(12743152-12743222)
chr5 (349-458)||(1972337-1972446)
chr5 (530-622)||(13130382-13130475)
chr5 (227-319)||(8531465-8531557)
chr5 (205-292)||(36311124-36311211)
chr5 (195-241)||(10398539-10398585)
chr5 (68-138)||(12805970-12806040)
chr5 (644-746)||(41202280-41202382)
chr5 (349-458)||(1695760-1695869)
chr5 (349-458)||(6792600-6792709)
chr5 (351-456)||(36349463-36349568)
chr5 (378-442)||(8531450-8531514)
chr5 (66-138)||(10398254-10398325)
chr5 (775-818)||(1972739-1972782)
chr5 (309-424)||(31238790-31238904)
chr5 (323-385)||(1695761-1695823)
chr5 (773-824)||(35926886-35926939)
chr5 (215-265)||(36311178-36311228)
chr5 (204-237)||(33371649-33371682)
[»] chr8 (35 HSPs)
chr8 (504-816)||(26487543-26487859)
chr8 (504-818)||(42167742-42168059)
chr8 (582-793)||(10205589-10205794)
chr8 (504-678)||(38032852-38033027)
chr8 (160-349)||(31171262-31171458)
chr8 (537-746)||(41855877-41856087)
chr8 (537-746)||(18439178-18439388)
chr8 (540-746)||(41276188-41276395)
chr8 (537-672)||(28167913-28168049)
chr8 (537-679)||(484320-484463)
chr8 (545-818)||(19241462-19241739)
chr8 (545-818)||(19314646-19314923)
chr8 (583-746)||(24862503-24862666)
chr8 (232-372)||(31171266-31171406)
chr8 (323-453)||(31171239-31171369)
chr8 (537-690)||(15031376-15031530)
chr8 (259-397)||(31171268-31171406)
chr8 (537-666)||(42604561-42604691)
chr8 (592-746)||(41016849-41017003)
chr8 (315-424)||(31171295-31171404)
chr8 (591-679)||(44051597-44051685)
chr8 (504-663)||(24629009-24629166)
chr8 (592-690)||(45065843-45065941)
chr8 (583-746)||(22550223-22550384)
chr8 (349-458)||(26487416-26487525)
chr8 (349-458)||(42168091-42168200)
chr8 (204-252)||(26140993-26141041)
chr8 (509-612)||(27784459-27784563)
chr8 (51-138)||(31171706-31171792)
chr8 (537-667)||(40703471-40703602)
chr8 (205-238)||(10205420-10205453)
chr8 (227-268)||(12504194-12504235)
chr8 (349-458)||(19241792-19241901)
chr8 (349-458)||(19314976-19315085)
chr8 (773-818)||(38032739-38032784)
[»] scaffold0258 (3 HSPs)
scaffold0258 (504-631)||(9577-9705)
scaffold0258 (367-467)||(9447-9547)
scaffold0258 (227-280)||(9442-9495)
[»] scaffold0589 (1 HSPs)
scaffold0589 (532-631)||(5415-5515)
[»] scaffold0500 (1 HSPs)
scaffold0500 (513-781)||(1461-1726)
[»] scaffold0176 (1 HSPs)
scaffold0176 (540-746)||(2899-3106)
[»] scaffold0494 (1 HSPs)
scaffold0494 (537-690)||(5777-5931)
[»] scaffold0618 (1 HSPs)
scaffold0618 (582-665)||(4519-4602)


Alignment Details
Target: chr7 (Bit Score: 164; Significance: 4e-87; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 504 - 835
Target Start/End: Original strand, 4230560 - 4230895
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||||||||||||  |||||| | |||||||||||| |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||    
T  4230560 caattagacattacaagccattacaatcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgacagtccctggggcacctgcttttggttgag 4230659  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    || ||||||||||||||||||| |||||| ||   || || |||||||||||||||||||||||||| ||  ||||||| ||||||||| ||||| |||     
T  4230660 gatcaaaatagcatgtcctcccgctcctcctccacctggaatgattgtacaccggcaccttcgaatctttt-tttttacggaaccatcacattcgatttc 4230758  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctga----gacatatctacataaac 798  Q
    || ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||  ||| ||||||| |    || | ||||||||||||    
T  4230759 gtgccatgtcataggcgattttgctttcttcttctcatcgccctcctttttgttcaattgaacattaccctgattcttattttgatacatctacataaac 4230858  T
Q  799 aaatcggtgatcaaaacctaaactaattctaacaatt 835  Q
    |||||||||||||||| |||||||||| |||||||||    
T  4230859 aaatcggtgatcaaaatctaaactaatcctaacaatt 4230895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 504 - 835
Target Start/End: Complemental strand, 1641804 - 1641467
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    ||||||| ||||||||   |||||| | |||||||||||| |||||| ||||||| ||| |||||||||||||| |||||| ||||| ||||||||| ||    
T  1641804 caattaggcattacaatccattacattcaatcatcttcctcgtcacacaagtcaactggattgtcctcgccagttcctggggcaccttcttttggttgag 1641705  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||| ||||||||||| |||||| |||  || | |||||||||||||||||||||| |||||||| ||||||| ||||||||| ||||  || |    
T  1641704 gaccaaaataacatgtcctcccgctcctcctcaacctcgtttgattgtacaccggcaccttcaaatccttcttttttacggaaccatcacattcaattat 1641605  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattc-----tgagacatatctacataaa 797  Q
    || ||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||| |   ||| ||||||     |||||||||||||||||||    
T  1641604 gtgccatgtcataggcgatttttctttcttcttctcatcacccaccttttttttcaactgagcgttaccctgattctgatatgagacatatctacataaa 1641505  T
Q  798 caaatcggtgatcaaaacctaaactaattctaacaatt 835  Q
     |||| || ||||||||||||||||||| |||||||||    
T  1641504 aaaattggcgatcaaaacctaaactaatcctaacaatt 1641467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 504 - 818
Target Start/End: Original strand, 22291933 - 22292251
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||    
T  22291933 caattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattaggttgtcctcgacagtccctggggcacctgcttttggctcag 22292032  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| ||||||| ||||||||| |||| || || |||||| ||  | ||      
T  22292033 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcacctttgaatccttctttttgacggatccatcacatgtgattcc 22292132  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| ||||||||| ||||| |||| || ||||||||   ||| || ||||||| |||    || |||||||||||||||||||||||||||    
T  22292133 gtgccatgtcatcggcgatttttctttcttcttgtcgtcaccctccttcttcttgttcaactaaacgtttccctgattctgagacatatctacataaaca 22292232  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||| ||||||||||||    
T  22292233 aatcggcgatcaaaaccta 22292251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 43350514 - 43350196
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||| ||||||| | |||||| | ||||||||||||  ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| |     
T  43350514 caattagatattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctgcttttggttgaa 43350415  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  ||  | ||||| |||||| |||| |||||||||||| |||| || || |||||| ||  | |||     
T  43350414 gaccaaaatagcatgtcctcccgctcctcctcaacctcaaatgattatacaccagcacattcgaatccttctttttgacggatccatcacatgtgatttc 43350315  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| |||||| || ||||| |||| || ||||||||   ||| || ||||||| |||    || |||||||||||||||||||||||||||    
T  43350314 gtgccatgtcatcggcgatatttctttcttcttgtcgtcaccctccttcttcttgttcaactcaacgtttccctgattctgagacatatctacataaaca 43350215  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||| ||||||||||||    
T  43350214 aatcggcgatcaaaaccta 43350196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 562 - 831
Target Start/End: Complemental strand, 3380123 - 3379849
Alignment:
Q  562 ggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcac 660  Q
    |||||| |||| |||||| || ||||||||||||||||| |||||||||||||||||||||||| |||||| |||| || || | ||| |||| ||||||    
T  3380123 ggttgtgctcgacagtccttgtggcacctgcttttggttgaggaccaaaatagcatgtcctcccgctcctcctcagtctggactaattatacatcggcac 3380024  T
Q  661 cttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaac 760  Q
    |||| | |  ||  ||||||  ||||||| | ||||| |||||| |||||||| | | |||||||||| | |||||||||||||||| ||||| ||||||    
T  3380023 cttcaatt--tttttttttatggaaccattacattcgattttgtgccatgtcacaagtgattttgcttgcttcttctcatcaccctcttttttgttcaac 3379926  T
Q  761 tgaaca-caacct-----tgattctgagacatatctacataaacaaatcggtgatcaaaacctaaactaattctaac 831  Q
    |||||| || |||     ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  3379925 tgaacatcaccctaattctgagtctgagacatatctacataaagaaatcggtgatcaaaacctaaactaatcctaac 3379849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 46 - 265
Target Start/End: Original strand, 4230253 - 4230485
Alignment:
Q  46 gaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatcc-aacttcagaggtaaaacaattgttgtaccacat 144  Q
    |||| |||| |||||| |||||| | |||||||||| ||| |||||||| |||||| |||||| || || ||||||||||| ||||||||||||| ||||    
T  4230253 gaatggaacaataaaatttccggtttaatgcttgagggttgttgtttagcaagtttgaatttaccccaaattcagaggtaagacaattgttgtacgacat 4230352  T
Q  145 atctctacccgaatttaatgtaatgataggacatatttaggaactttattta------------atgtaacttttattcaaatttatttaatacgcaact 232  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||            |||||||||||| |||||  |||| || |||| | |    
T  4230353 atctctacccgaatgtaatgtaatgataggacatatttaggaactttatgtaacgtaatataatatgtaacttttaatcaaaaatattcaacacgcgatt 4230452  T
Q  233 ttattcgaaattattcaatacgcgactttattc 265  Q
    ||| ||||||||| |||||||||||||||||||    
T  4230453 ttaatcgaaattactcaatacgcgactttattc 4230485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 504 - 818
Target Start/End: Original strand, 42736078 - 42736395
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggcacctgcttttggttcagg 603  Q
    |||||||| |||| || | |||||| | ||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||| | |||    
T  42736078 caattagatattataactcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctgggcacctgcttttggctgagg 42736177  T
Q  604 accaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttg 703  Q
    ||||||||||||||| ||||| |||||| |||  || || ||||| |||||| ||| |||| |||||||| |||| || || |||||| ||  | || ||    
T  42736178 accaaaatagcatgttctcccgctcctcctcaacctcgaatgattatacaccagcatcttcaaatccttctttttgacggatccatcacatgtgattctg 42736277  T
Q  704 taccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaacaa 800  Q
    | ||||||||| | ||||||| ||||| |||| |  ||||||||   ||| || |||| |  ||||      ||||||||||||||||||||||||||||    
T  42736278 tgccatgtcatcgacgatttttctttcttcttgtggtcaccctccttcttcttgttcaccccaacattttgctgattctgagacatatctacataaacaa 42736377  T
Q  801 atcggtgatcaaaaccta 818  Q
     | || ||||||||||||    
T  42736378 cttggcgatcaaaaccta 42736395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 504 - 818
Target Start/End: Original strand, 17184287 - 17184604
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | |||||||||||   ||||| ||||||||||||||||||||| || ||| |||| ||||||||||||| | ||    
T  17184287 caattagatattacaacacattacattcaatcatcttccgcatcacacaagtcaattgggttgtcctcgacaatccatggggcacctgcttttggctaag 17184386  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    ||| || ||||||||||||||| |||||| |||  || || ||||| |||||| ||||||||||||||||| |||| |  || |||||| ||  | ||      
T  17184387 gac-aatatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttctttttgattgatccatcacatgtgattcc 17184485  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| ||||||||| ||||| |||| |  ||||||||   ||| || ||||||| |||    || ||||| |||||||||||||||||||||    
T  17184486 gtgccatgtcatcggcgatttttctttcttcttgttttcaccctccttcttcttgttcaactcaacgtttccctgattttgagacatatctacataaaca 17184585  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||| ||||||||||||    
T  17184586 aatcggcgatcaaaaccta 17184604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 536 - 818
Target Start/End: Complemental strand, 15900496 - 15900224
Alignment:
Q  536 atcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtc 634  Q
    |||||||| |||||| | || ||| |||||||||||| ||||||||||| ||||||||||||  | |||||||||||||||| ||||||| |||||| ||    
T  15900496 atcttcctcgtcacacaggttaatcgggttgtcctcgacagtccctggggcacctgcttttgactgaggaccaaaatagcatatcctcccactcctcctc 15900397  T
Q  635 aggctagattgattgtacaccggcaccttcgaatccttccttttt-acagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatc 733  Q
    || || || |||||||||||| |||||||||||| || ||||||| || ||||||||| |        ||| |   | ||||||||||||| ||||| ||    
T  15900396 agcctcgactgattgtacaccagcaccttcgaat-ctccctttttgacggaaccatcaca--------tgtgc---gacataggcgatttttctttcttc 15900309  T
Q  734 ttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||  ||||||||||||| || ||||||| |||    || |||||||||||||||||||||||||||||| || ||||||||||||    
T  15900308 ttggcatcaccctccttgttgttcaacttaacgtttccctgattctgagacatatctacataaacaaattggcgatcaaaaccta 15900224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 537 - 691
Target Start/End: Original strand, 48271771 - 48271926
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |  ||||||||||| |||||  |||||||| ||||||||||||||||||| |||| |||||| |||    
T  48271771 tcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggaccaaaatagcatgtcatcccgctcctcctca 48271870  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatca 691  Q
      || || |||||||||||||||||||||||| ||||| ||||||| |||||||||    
T  48271871 acctcgagtgattgtacaccggcaccttcgaacccttcttttttacggaaccatca 48271926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 540 - 746
Target Start/End: Original strand, 34141974 - 34142181
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggc 638  Q
    |||| |||||| |||||||| |||||  || |  ||||||||| |||||||  |||||||| ||||||||||||||||||| |||| |||||| |||  |    
T  34141974 tcctcgtcacacaagtcaatcgggtttcccgctacagtccctgtggcaccttgttttggttgaggaccaaaatagcatgtcatcccgctcctcctcaacc 34142073  T
Q  639 tagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctc 738  Q
    | || ||||||||| |||||||||||||| ||||| ||||| | ||||||||  |  |  ||| || ||| ||||||||||||||| ||||  |||||||    
T  34142074 tcgagtgattgtactccggcaccttcgaacccttctttttttcggaaccatcgcaaacaatttcgtgccacgtcataggcgatttttctttgttcttctc 34142173  T
Q  739 atcaccct 746  Q
    ||||||||    
T  34142174 atcaccct 34142181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 537 - 742
Target Start/End: Original strand, 41623201 - 41623407
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||||||  ||||| |||||||| |||||| || |  ||||||||||| |||||  |||||| | ||||||||||||||||||||| || |||||| |||    
T  41623201 tcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggatgaggaccaaaatagcatgtccttccgctcctcctca 41623300  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || ||||||||||||| |||||||||| | ||| ||||| | ||||||||| |  |  ||| || ||||||||||||||||||| ||||  ||||    
T  41623301 acctcgactgattgtacaccgacaccttcgaaccattctttttttcggaaccatcacaaacaatttcgtgccatgtcataggcgatttttctttgttctt 41623400  T
Q  736 ctcatca 742  Q
    |||||||    
T  41623401 ctcatca 41623407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 42504464 - 42504310
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || |||||||| |||||| |  ||||||||| || |||| ||||||||| |||||| ||||||||||||||||| |||||| |||    
T  42504464 tcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcggtaccttcttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 42504365  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || ||||||||||| |||||||||||| ||||| ||||| | ||||||||    
T  42504364 acctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatc 42504310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 583 - 679
Target Start/End: Complemental strand, 45362335 - 45362239
Alignment:
Q  583 ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||| ||||| |||||    
T  45362335 ggcaccttcttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttt 45362239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 545 - 631
Target Start/End: Complemental strand, 20877105 - 20877018
Alignment:
Q  545 gtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctc 631  Q
    |||||| || ||||| |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  20877105 gtcacacaattcaatcgggttgtcctcgacagtccctggggcacctgcttttggttgaggaccaaaatagcatgtcctcccgctcctc 20877018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 537 - 742
Target Start/End: Original strand, 42683523 - 42683732
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||||||  ||||| |||||||| |||||| || |  ||||||||||| |||||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  42683523 tcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 42683622  T
Q  636 ggctagattgattgtacac---cggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcat 732  Q
      || || |||||||||||   ||||||||||||| ||||| ||||| | ||||||||| |  |  ||  || ||||| ||||||||||||| ||||  |    
T  42683623 acctcgagtgattgtacaccggcggcaccttcgaacccttctttttttcggaaccatcacaaacaattcagtgccatgccataggcgatttttctttgtt 42683722  T
Q  733 cttctcatca 742  Q
    ||||||||||    
T  42683723 cttctcatca 42683732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 537 - 679
Target Start/End: Complemental strand, 46861284 - 46861141
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||| | |||||||| |||||| || |  ||||||||||| |||||  |||||||| |||||||||||||||| ||||||| |||||| |||    
T  46861284 tcttcctcgtcatacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggaccaaaatagcatttcctcccactcctcctca 46861185  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
      || || |||||||||||||||||||||||| ||||| |||||    
T  46861184 atctcgagtgattgtacaccggcaccttcgaacccttctttttt 46861141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 9366326 - 9366172
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  9366326 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 9366227  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  9366226 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 9366172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 746
Target Start/End: Original strand, 17840319 - 17840529
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| |||||| || |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  17840319 tcttcctcgtcacacaaatcaatcgggttgcccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 17840418  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || ||||||||||||||||| |||||| ||||| ||||| | ||||||||  |  |  ||  || ||| ||||||||||||||| ||||  ||||    
T  17840419 acctcgagtgattgtacaccggcacattcgaacccttctttttttcggaaccatcgcaaacaattcagtgccacgtcataggcgatttttctttgttctt 17840518  T
Q  736 ctcatcaccct 746  Q
    |||||||||||    
T  17840519 ctcatcaccct 17840529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 20565759 - 20565913
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || || ||||| |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  20565759 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 20565858  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  20565859 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 20565913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 28978322 - 28978112
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |  ||||||||| ||| |||  |||| ||| |||||||||||| ||||||||||| |||||| |||    
T  28978322 tcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctgtggcgccttgtttttgttgaggaccaaaataacatgtcctcccgctcctcctca 28978223  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || |||||||||||||| ||||||||| ||||| ||||| | ||||||||| |  |  ||  || ||| |||||| |||||||| ||||  ||||    
T  28978222 acctcgagtgattgtacaccgggaccttcgaacccttctttttttcggaaccatcacaaacaattccgtgccacgtcatatgcgatttttctttgttctt 28978123  T
Q  736 ctcatcaccct 746  Q
    |||||||||||    
T  28978122 ctcatcaccct 28978112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 706 - 815
Target Start/End: Complemental strand, 20876964 - 20876855
Alignment:
Q  706 ccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcgg 805  Q
    |||||||||  |||||||| ||||| |||| || || ||||||||||| ||||||| |||    || |||||||||||||||||||||||||||||||||    
T  20876964 ccatgtcatcagcgatttttctttcttcttgtcgtcgccctcctttttgttcaactcaacgtttccctgattctgagacatatctacataaacaaatcgg 20876865  T
Q  806 tgatcaaaac 815  Q
    ||||||||||    
T  20876864 tgatcaaaac 20876855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 537 - 672
Target Start/End: Complemental strand, 21186383 - 21186247
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| | |||| || |  |||||||| ||||||||  |||||||| |||||||||||| ||||||||||| |||||| |||    
T  21186383 tcttcctcgtcacacaagtcaatcgagttgcccgctacagtccctagggcaccttgttttggttgaggaccaaaataacatgtcctcccgctcctcctca 21186284  T
Q  636 ggctagattgattgtacaccggcaccttcgaatcctt 672  Q
      || ||||||||||| ||||||||||||||| ||||    
T  21186283 acctggattgattgtataccggcaccttcgaaccctt 21186247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 583 - 746
Target Start/End: Original strand, 40589904 - 40590067
Alignment:
Q  583 ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttaca 682  Q
    |||||||  |||||||| | |||||||||||||||||||||| |||||| |||  || || |||||||||||||||| ||||||| ||||| ||||| |     
T  40589904 ggcaccttgttttggttgatgaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcatcttcgaacccttctttttttcg 40590003  T
Q  683 gaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
    ||||||||  |  |  || ||| ||| ||| ||||||||||| ||||  |||||||||||||||    
T  40590004 gaaccatcgcaaacaattctgtgccacgtcgtaggcgatttttctttgttcttctcatcaccct 40590067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 575 - 744
Target Start/End: Original strand, 48194123 - 48194293
Alignment:
Q  575 agtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttc 673  Q
    |||||||| |||||||  |||||||| |||||||||||||||||||||||| |||||| |||  || || |||||||||||| ||||||||||| |||||    
T  48194123 agtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccagcaccttcgaacccttc 48194222  T
Q  674 ctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcacc 744  Q
     ||||| |  |||||||  |  |  ||| ||  ||||||||||||||||||  |||  |||||||||||||    
T  48194223 tttttttccaaaccatcgcaaacaatttcgtgtcatgtcataggcgatttttatttgttcttctcatcacc 48194293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 537 - 667
Target Start/End: Complemental strand, 36392910 - 36392779
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |  ||||||||| |||||||  |||||||| |||||||||||| ||||||||||| |||||| |||    
T  36392910 tcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctgaggcaccttgttttggttgaggaccaaaataacatgtcctcccgctcctcctca 36392811  T
Q  636 ggctagattgattgtacaccggcaccttcgaa 667  Q
      || || ||||||||||  ||||||||||||    
T  36392810 acctggactgattgtacaatggcaccttcgaa 36392779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 523 - 664
Target Start/End: Complemental strand, 16886100 - 16885959
Alignment:
Q  523 attacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcct 621  Q
    |||||| |||||||||| | |  |||||||||||||||||||||||||||  ||| |||| ||||||| ||||||||| |||||||||||| || |||||    
T  16886100 attacatttaatcatctccttcatcacataagtcaattgggttgtcctcgagagttcctgtggcacctacttttggttgaggaccaaaataacaagtcct 16886001  T
Q  622 ccctctcctcgtcaggctagattgattgtacaccggcaccttc 664  Q
      | || ||| |||| || || ||||||| |||||||||||||    
T  16886000 ttcgct-ctcttcagcctggactgattgttcaccggcaccttc 16885959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 366 - 475
Target Start/End: Original strand, 4230424 - 4230533
Alignment:
Q  366 ttttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatgtaccaaaatacg 465  Q
    ||||| || ||| ||||||| || ||| |||||  ||||||| |||||| |||||||||||||| |||||| ||||| || |||||||||||||||| ||    
T  4230424 ttttaatcaaaaatattcaacacgcgattttaatcgaaattactcaatacgcgactttattcaaagtaccataatgtcaagcaaaatgtaccaaaatgcg 4230523  T
Q  466 cacggcatat 475  Q
    |||| |||||    
T  4230524 cacgacatat 4230533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 190
Target Start/End: Complemental strand, 1642342 - 1642207
Alignment:
Q  56 ataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgtaccacatatct-ctaccc 154  Q
    |||||||||||||||||||||||||||| |  |||||||  ||||| |||||| || | |||| |||||| ||||||||||||      |  | | ||||    
T  1642342 ataaaacttccgggtgaatgcttgagagctgctgtttagccagtttgaatttaccccatttcataggtaagacaattgttgtagtttgaaggtgcaaccc 1642243  T
Q  155 gaatttaatgtaatgataggacatatttaggaactt 190  Q
    |||| |||||||||||||||||||||||||||||||    
T  1642242 gaatgtaatgtaatgataggacatatttaggaactt 1642207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 574 - 664
Target Start/End: Complemental strand, 28113458 - 28113367
Alignment:
Q  574 cagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttc 664  Q
    ||||||||| |||||||  |||||||| |||||||||||| ||||||||||| |||||| |||  || || |||||||||||||||||||||    
T  28113458 cagtccctgtggcaccttgttttggttgaggaccaaaataacatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttc 28113367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 537 - 746
Target Start/End: Original strand, 34157800 - 34158009
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| |||||| || |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| ||||   |||    
T  34157800 tcttcctcgtcacacaaatcaatcgggttgcccgctacagtccctgtggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcc---tca 34157896  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttc--ctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatc 733  Q
      || || |||||||||||||||||||||||| |||||   ||||| | ||||||||  |  |  |||||| ||| | ||||||||||||| ||||  ||    
T  34157897 acctcgagtgattgtacaccggcaccttcgaacccttctttttttttcggaaccatcgcaaacaattttgtgccacggcataggcgatttttctttgttc 34157996  T
Q  734 ttctcatcaccct 746  Q
    |||||||||||||    
T  34157997 ttctcatcaccct 34158009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 3380564 - 3380650
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgt 137  Q
    |||| ||||||||||||||| |||||||||||||| |||||||  | |||| |  |||||||| ||||||||||| |||||||||||    
T  3380564 gaacaataaaacttccgggtaaatgcttgagagttgttgtttaataggtttgaccttatccaatttcagaggtaagacaattgttgt 3380650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 523 - 597
Target Start/End: Complemental strand, 41934560 - 41934486
Alignment:
Q  523 attacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggcacctgcttttgg 597  Q
    |||||| |||||||| | ||| || || |||||||||||||||||||||| |||| |||||||||||||||||||    
T  41934560 attacatttaatcatttccctcgttacttaagtcaattgggttgtcctcgacagttcctgggcacctgcttttgg 41934486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 397
Target Start/End: Original strand, 151095 - 151288
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaa 304  Q
    ||||||| |||||||| |||||||  ||||||| ||| ||||| ||||| | | |||  ||||| || ||||||||||||||||||||||  |   | ||    
T  151095 tttattcgaatttattaaatacgctgctttatttgaatttatttaatacacaaattttatcgaattttttcaatacgcaactatattcgaattcgctaaa 151194  T
Q  305 tacacaac-tatattcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
    ||| |||| | |||| ||  ||||| |||| || | |||||||||| ||||| ||||| | | |||| ||||| ||||||||||||| ||||||    
T  151195 tacgcaacttttatttgaatttattaaatacgcaaatttatttgaacttatttaatacacaaatttaatcgaatttattcaatacacaacttta 151288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 20877291 - 20877182
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| || ||| |||| |||||||||||||| |  ||| |||||  |||||||||||| |||||| ||||||||| ||||||  | || || ||    
T  20877291 aattattcaaaacacgactttaatcgaaattattcaaaatgcgattttaattgaaattattcaaaatgcgaatttattcaaagtaccaataagtcaagca 20877192  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  20877191 aaatgtacca 20877182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 664
Target Start/End: Original strand, 10225190 - 10225318
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |  || || ||| |||||||  |||||||| || ||||||||||||| ||| ||| |||||| |||    
T  10225190 tcttcctcgtcacacaagtcaatcgggttggccgctacaatctctgaggcaccttgttttggttgagaaccaaaatagcatttccccccgctcctcctca 10225289  T
Q  636 ggctagattgattgtacaccggcaccttc 664  Q
      || || |||||||||||||||||||||    
T  10225290 acctcgactgattgtacaccggcaccttc 10225318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 429
Target Start/End: Original strand, 151090 - 151293
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatatta 326  Q
    ||||||||||||||| ||||| |||||||  ||||||| ||| || || ||||| ||| | |  ||||  || |||||||| |||||||||||||  |      
T  151090 gcaactttattcgaatttattaaatacgctgctttatttgaatttatttaatacacaaattttatcgaattttttcaatacgcaactatattcgaattcg 151189  T
Q  327 ttcaatatgcgacttt-atttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttat 425  Q
     | |||| || ||||| ||||||| ||||| ||||||| | |||||| ||| ||||| ||||||| | |||||  ||| ||||||||||  | |||||||    
T  151190 ctaaatacgcaacttttatttgaatttattaaatacgcaaatttatttgaacttatttaatacacaaatttaatcgaatttattcaatacacaactttat 151289  T
Q  426 tcaa 429  Q
    ||||    
T  151290 tcaa 151293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 21613978 - 21613932
Alignment:
Q  195 taatgtaacttttattcaaatttatttaatacgcaactttattcgaa 241  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||    
T  21613978 taatgtaagttttattcgaatttattcaatacgcaactttattcgaa 21613932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 17184160 - 17184269
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| |||||||||||||| || ||| |||||  ||||||||| || | |  | ||||||||| ||||||  |||| || ||    
T  17184160 aattattcaaaacgcgactttaatcgaaattattcaaaacgcgattttaattgaaattatttaaaacgaaaatttattcaaagtaccaatatgtcaagca 17184259  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  17184260 aaatgtacca 17184269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 18150313 - 18150402
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcga 294  Q
    |||| |||||||||||| |||||||| |||  ||||| |||||| |||||| |||||||||||| | | | ||||||||| | |||||||    
T  18150313 tttaatcaaatttatttcatacgcaaattttatcgaatttattctatacgcaactttattcgaattcgctaaatacgcaagtttattcga 18150402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 373
Target Start/End: Complemental strand, 20877290 - 20877213
Alignment:
Q  296 attattcaatacacaactatattcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattc 373  Q
    ||||||||| |||| ||| || |||| ||||||||| |||||| |||| |||||||||||||| | |||| |||||||    
T  20877290 attattcaaaacacgactttaatcgaaattattcaaaatgcgattttaattgaaattattcaaaatgcgaatttattc 20877213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 509 - 612
Target Start/End: Complemental strand, 27317073 - 27316969
Alignment:
Q  509 agacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggacca 607  Q
    |||||||||||   |||||| | |||||||| |||  || | |||||||||||||||||||| | |||| ||| ||||||||||||||||||   |||||    
T  27317073 agacattacaaaccattacattcaatcatctccctcatcgcttaagtcaattgggttgtcctagacagttcctagggcacctgcttttggttgtagacca 27316974  T
Q  608 aaata 612  Q
    |||||    
T  27316973 aaata 27316969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 17184161 - 17184220
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattatt 382  Q
    ||||||||| | ||||||||| | |||||||||||| ||||||||||| | |||||||||    
T  17184161 attattcaaaacgcgactttaatcgaaattattcaaaacgcgattttaattgaaattatt 17184220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 21613900 - 21613846
Alignment:
Q  214 atttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaa 268  Q
    |||| ||||||||| |||||||||| || ||||||||||||| ||||||| ||||    
T  21613900 atttttttaatacgtaactttattcaaatttattcaatacgcaactttatacgaa 21613846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 1641927 - 1641878
Alignment:
Q  216 ttatttaatacgcaactttattcgaaattattcaatacgcgactttattc 265  Q
    ||||| |||||||||||||| |||||||||||||| ||| || |||||||    
T  1641927 ttattcaatacgcaactttaatcgaaattattcaaaacgtgattttattc 1641878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 2356842 - 2356879
Alignment:
Q  151 acccgaatttaatgtaatgataggacatatttaggaac 188  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  2356842 acccgaatgtaatgtaatgataggacatgtttaggaac 2356879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 4230437 - 4230482
Alignment:
Q  352 tattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
    ||||||| ||||||||||| ||||||||| ||||||| ||||||||    
T  4230437 tattcaacacgcgattttaatcgaaattactcaatacgcgacttta 4230482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 15900673 - 15900608
Alignment:
Q  244 tattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacac 309  Q
    ||||||| ||||||||||| |||||||| ||||| ||| |||| || |||| ||||||||| ||||    
T  15900673 tattcaaaacgcgactttaatcgaaattattcaaaacgtaactttaatcgaaattattcaaaacac 15900608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 6e-80; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 504 - 835
Target Start/End: Complemental strand, 4910756 - 4910418
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | |||||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||| | ||    
T  4910756 caattagatattacaacgtattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgacagtccctagggcacctgcttttggatgag 4910657  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| ||| || |||| ||||| ||||| |||| || ||||||| |||||||||||||||| ||||||||| ||||| ||||    
T  4910656 gaccaaaatagcatgtcctcccgctcttcctcagcctagaatgattatacatcgacaccttcaaatccttcctttttacggaaccatcacattcgatttt 4910557  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattc------tgagacatatctacataa 796  Q
    || ||||||||||||||||||||||||| |||| |||||||||| || ||| |||||||||||  ||   ||||||      |||||||||||||||||     
T  4910556 gtgccatgtcataggcgattttgctttcttcttgtcatcacccttctctttgttcaactgaacctaattctgattctgattttgagacatatctacatag 4910457  T
Q  797 acaaatcggtgatcaaaacctaaactaattctaacaatt 835  Q
    | |||| ||||||||||||||||||||||  ||||||||    
T  4910456 agaaattggtgatcaaaacctaaactaatcgtaacaatt 4910418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 504 - 835
Target Start/End: Complemental strand, 21411099 - 21410766
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcag 602  Q
    ||||||| ||| |||||  |||||| | |||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  21411099 caattaggcatcacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgccagtccctgtggcacctgcttttggttgag 21411000  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| || ||| |||  || || ||||||||||||||||||||| ||||||||  |||||| ||||||||| ||||| || |    
T  21410999 gaccaaaatagcatgtcctcccgcttctcctcaaccttgactgattgtacaccggcaccttcaaatccttctcttttacggaaccatcacattcgattat 21410900  T
Q  703 gtaccatgtcataggcga-ttttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaa 801  Q
    || | |||||||| |||| ||||  |||| || ||||||||| ||| ||||| |||||||||||   ||| ||||||||||||||||||||||||| |||    
T  21410899 gtgctatgtcataagcgattttttttttcttcctctcatcactctcatttttgttcaactgaacgttaccctgattctgagacatatctacataaaaaaa 21410800  T
Q  802 tcggtgatcaaaacctaaactaattctaacaatt 835  Q
    | || |||||||||||||| ||||  ||||||||    
T  21410799 ttggcgatcaaaacctaaattaatcgtaacaatt 21410766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 8 - 253
Target Start/End: Original strand, 31324626 - 31324871
Alignment:
Q  8 aacatatatagttaattctgcataatacatgnnnnnnngaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaattt 107  Q
    ||||||||||||| |||||||||||||||||       |||  |||| || |||||| |||||||||||||||||| | || ||||| |||||| |||||    
T  31324626 aacatatatagttgattctgcataatacatgttgttctgaaaggaacaattaaactttcgggtgaatgcttgagagctgttatttagcaagtttgaattt 31324725  T
Q  108 atccaacttcagaggtaaaacaattgttgtaccacatatctctacccgaatttaatgtaatgataggacatatttaggaactttatttaatgtaactttt 207  Q
    |||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| || |||||||||||||    
T  31324726 atcccatttcagaggtaacacaattgttgtaccacatatctctacccgaatgtaatgtaatgttatgacatatttaggaacttaatgtaatgtaactttt 31324825  T
Q  208 attcaaatttatttaatacgcaactttattcgaaattattcaatac 253  Q
    |||||||||||||||||| ||||||||||| ||| ||||| |||||    
T  31324826 attcaaatttatttaatatgcaactttatttgaatttatttaatac 31324871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 523 - 824
Target Start/End: Original strand, 9718363 - 9718664
Alignment:
Q  523 attacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgg-gcacctgcttttggttcaggaccaaaatagcatgtcct 621  Q
    |||||| | ||||||||| || |||||| ||||||||||||||||||||| |||||||||| ||||||||||| || | |||||||||||||||||||||    
T  9718363 attacattcaatcatctttctcgtcacacaagtcaattgggttgtcctcgacagtccctggagcacctgcttt-ggctgaggaccaaaatagcatgtcct 9718461  T
Q  622 ccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgat 721  Q
    ||| |||||| |||| || || || |||||||||||||||||||||||  |  |||| || ||||||||| ||||| || ||| |||||||| || ||||    
T  9718462 cccactcctcctcagcctggactggttgtacaccggcaccttcgaatcactttttttaacggaaccatcacattcgattatgtgccatgtcacagacgat 9718561  T
Q  722 tttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaacctaaac 821  Q
    ||||||||| |||||||||||||||||||||| |||||||||| |  |   ||||||||||||||||||| ||| | |||| |||||| |||||||||||    
T  9718562 tttgctttcttcttctcatcaccctcctttttgttcaactgaatatgattatgattctgagacatatctatatagagaaattggtgatgaaaacctaaac 9718661  T
Q  822 taa 824  Q
    |||    
T  9718662 taa 9718664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 504 - 804
Target Start/End: Original strand, 21412347 - 21412649
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcag 602  Q
    ||||||| ||| |||||  |||||| | |||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||    
T  21412347 caattaggcatcacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgccagtcccagaggcacctgcttttggttgag 21412446  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| || ||| |||  || || ||||||||||||||||||||| ||||||||  |||||| ||||||||| ||||| || |    
T  21412447 gaccaaaatagcatgtcctcccgcttctcctcaaccttgactgattgtacaccggcaccttcaaatccttctcttttacggaaccatcacattcgattat 21412546  T
Q  703 gtaccatgtcataggcga-ttttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaa 801  Q
    || | |||||||| |||| ||||  |||| || ||||||||| ||| ||||| |||||||||||   ||| ||||| |||||||||||||||||||||||    
T  21412547 gtgctatgtcataagcgattttttttttcttcctctcatcactctcatttttgttcaactgaacgttaccctgattatgagacatatctacataaacaaa 21412646  T
Q  802 tcg 804  Q
    |||    
T  21412647 tcg 21412649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 504 - 818
Target Start/End: Original strand, 21170566 - 21170881
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| ||||||| | |||||| | ||||||||||||  ||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||| | ||    
T  21170566 caattagatattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtcccgggggcacctgcttttggctgag 21170665  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    ||||||||||||||||||| || |||||| |||  || || ||||| |||||| ||||||||||||||||| |||  || || |||||| ||  | || |    
T  21170666 gaccaaaatagcatgtccttccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttcttttcgacggacccatcacatgtgattct 21170765  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaat 802  Q
     | ||||||||| ||||||||| ||||| |||| |||||||||| |||||| |||| || |||    || ||||||||||||||||||||||||||||||    
T  21170766 atgccatgtcatcggcgatttttctttcttcttgtcatcacccttctttttgttcacctcaacgtttccctgattctgagacatatctacataaacaaat 21170865  T
Q  803 cggtgatcaaaaccta 818  Q
    ||| ||||||||||||    
T  21170866 cggcgatcaaaaccta 21170881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 8 - 282
Target Start/End: Original strand, 13866717 - 13867002
Alignment:
Q  8 aacatatatagttaattctgcataatacatgnnnnnnngaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaattt 107  Q
    ||||||||||||| |||||||||||||||||       |||  |||| ||||||||||||||||||| ||||||||   |||||||  |||||| |||||    
T  13866717 aacatatatagttgattctgcataatacatgttgttttgaaaggaacaataaaacttccgggtgaatacttgagagccgttgtttaacaagtttgaattt 13866816  T
Q  108 atccaacttcagaggtaaaacaattgttgtaccacatatctctacccgaatttaatgtaatgataggacatatttaggaactttatttaat--------- 198  Q
    || ||| ||||||||||| | |||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||             
T  13866817 attcaatttcagaggtaagataattgttgtagcacatatctctacccgaatgtaatgtaatgatatgacatatttaggaactttatgtaatgtaatgcaa 13866916  T
Q  199 -gtaacttttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgac-tttattcgaaattgttcaatacgc 282  Q
     ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| | || |||||||||| || || |||||||    
T  13866917 cgtaacttttattcgaatttatttaatacgcaactttattcgaatttatttaatacacaacttttattcgaatttatttaatacgc 13867002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 530 - 835
Target Start/End: Original strand, 17292780 - 17293078
Alignment:
Q  530 ttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctc 628  Q
    |||||||||| ||| ||| | ||  |||||||||||||||||| |||||  |||| ||||||||||| ||| |||||||||||||||||||||||  |||    
T  17292780 ttaatcatctccctcgtcgcttatctcaattgggttgtcctcgacagtctttggggcacctgctttttgttgaggaccaaaatagcatgtcctcctgctc 17292879  T
Q  629 ctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctt 728  Q
    ||| |||| || || || ||||||||||||||||||||||||||  ||||||| ||||||||| ||||| || ||| |||||||| ||| |||||| |||    
T  17292880 ctcctcagccttgaatggttgtacaccggcaccttcgaatcctt-ttttttacggaaccatcacattcgattatgtgccatgtcacaggagatttttctt 17292978  T
Q  729 tcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaacctaaactaattct 828  Q
    || |||||||||||||||||||||| ||||| ||      |   ||||||||||||||||||||||| | |||| ||||||||||||||| |||||| ||    
T  17292979 tcttcttctcatcaccctcctttttgttcaa-tg------attctgattctgagacatatctacatagagaaattggtgatcaaaacctacactaatcct 17293071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 51026911 - 51026593
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| ||||||||||||||||||| | ||||||||||| ||||||||||||| | ||    
T  51026911 caattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtccttgacagtccctggggcacctgcttttggctgag 51026812  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    ||||||||||||||||| |||| |||||| |||  || || ||||| |||| | ||||||||||||||||| |||| || || |||||| ||  | |||     
T  51026811 gaccaaaatagcatgtcatcccgctcctcctcaacctcgaatgattatacatcagcaccttcgaatccttctttttgacggatccatcacatgtgatttc 51026712  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctccttt---ttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| || |||||| ||||| |||| || ||||||||||||   || |||| || |||    || |||||||||||||||||||||||||||    
T  51026711 gtgccatgtcatcggtgatttttctttcttcttgtcgtcaccctcctttttcttgttcacctcaacgtttccctgattctgagacatatctacataaaca 51026612  T
Q  800 aatcggtgatcaaaaccta 818  Q
    | |||| ||||||||||||    
T  51026611 actcggcgatcaaaaccta 51026593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 504 - 818
Target Start/End: Original strand, 2774107 - 2774424
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggcacctgcttttggttcagg 603  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| ||||||||||||||||||||| ||||||| |||||||||||||||||| | |    
T  2774107 caattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtcccggggcacctgcttttggttgaag 2774206  T
Q  604 accaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttg 703  Q
    ||||||||||||||||||||| |||||| |||  || || | ||| |||||  ||||||||  ||||||| |||| || || |||||| ||  | || ||    
T  2774207 accaaaatagcatgtcctcccgctcctcctcaacctcgaataattatacacaagcaccttcttatccttctttttgacggatccatcacatgtgattctg 2774306  T
Q  704 taccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaacaa 800  Q
    | |||| |||| ||||||||| ||||| |||| || ||||||||   ||| || ||||||| |||    || ||||||||||||||||||| ||||||||    
T  2774307 tgccatttcatcggcgatttttctttcttcttgtcgtcaccctccttcttcttgttcaactcaacgtttccctgattctgagacatatctaaataaacaa 2774406  T
Q  801 atcggtgatcaaaaccta 818  Q
    |||||  |||||||||||    
T  2774407 atcggctatcaaaaccta 2774424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 51 - 202
Target Start/End: Original strand, 13854988 - 13855139
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgtaccacatatctct 150  Q
    |||| ||||||||||||||||||| ||||| || | |||||||  |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  13854988 gaacaataaaacttccgggtgaatacttgaaagctgttgtttaacaagtttgaatttatccaatttcagaggtaagacaattgttgtaccacatatctct 13855087  T
Q  151 acccgaatttaatgtaatgataggacatatttaggaactttatttaatgtaa 202  Q
    | |||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  13855088 atccgaatgtaatgtaatgatatgacatatttaggaactttatgtaatgtaa 13855139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 545 - 814
Target Start/End: Complemental strand, 49816495 - 49816223
Alignment:
Q  545 gtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagat 643  Q
    |||||| |||||||| |||||||||||| |||||||| |||||||||||||||| | |||||||||||||||||||||||  |||||| |||  || ||     
T  49816495 gtcacacaagtcaatcgggttgtcctcgacagtccctagggcacctgcttttggctgaggaccaaaatagcatgtcctccagctcctcctcaacctcgac 49816396  T
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcac 743  Q
    ||||| |||||   |||||||||||||||| |||| |||||||||||| ||  | || ||| ||||||||| ||||||||| ||||| |||| |||||||    
T  49816395 tgattatacacaa-caccttcgaatccttctttttgacagaaccatcacatgtgattctgtgccatgtcatcggcgatttttctttcttcttgtcatcac 49816297  T
Q  744 cctccttt---ttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaa 814  Q
    ||||||||   || ||||||| ||     || |||||||||||||||||||||||||||||| || ||||||||    
T  49816296 cctcctttctgtttttcaactcaatgtttccctgattctgagacatatctacataaacaaattggcgatcaaaa 49816223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 504 - 750
Target Start/End: Complemental strand, 36775605 - 36775358
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| ||||||| | |||||| | ||||||||||||  ||||| ||||||||||||||||||||| | ||||||||| ||||||||||||| | ||    
T  36775605 caattagatattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacggtccctggggcacctgcttttggctgag 36775506  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || | ||| |||||| ||||||||||||||||| ||||||| || |||||| ||  | ||||    
T  36775505 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaataattatacaccagcaccttcgaatccttcttttttacggatccatcacatgtgatttt 36775406  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctt 750  Q
    || |||||||||  | |||||| ||||| |||| |  |||||||||||    
T  36775405 gtgccatgtcatcagtgatttttctttcttcttgttgtcaccctcctt 36775358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 504 - 668
Target Start/End: Original strand, 25145619 - 25145784
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgg-gcacctgcttttggttcag 602  Q
    |||||||||||||||||  |||||| | |||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||    
T  25145619 caattagacattacaagccattacattcaatcatcttcctcgtcacataagtcaattgggttgtcctcgacagtccctggcgcacctgcttttggttgag 25145718  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaat 668  Q
    |||| ||||| |||||||| || |||||| |||| || |  || ||||||||||||||||||||||    
T  25145719 gaccgaaataacatgtccttccgctcctcctcagcctgggctggttgtacaccggcaccttcgaat 25145784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 504 - 818
Target Start/End: Original strand, 45940628 - 45940946
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | |||||||||| |  ||||| |||||||||| |||||||||| ||||| || |||||||||||||||| | ||    
T  45940628 caattagatattacaacccattacattcaatcatcttcgtcatcacacaagtcaattgagttgtcctcgacagtctctagggcacctgcttttggctgag 45940727  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||| ||||||||||||||||| |||||| |||  || || ||||| |||| | ||||||||||||||||| |||| || || |||||| ||  | ||      
T  45940728 gacccaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacatcagcaccttcgaatccttctttttgacggatccatcacatgtgattcc 45940827  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| | | ||||| ||||| |||| || ||||||||   ||| || ||||||| |||    ||||||||||||||||||||||||||||||    
T  45940828 gtgccatgtcattgacaatttttctttcttcttgtcgtcaccctccttcttcttgttcaactcaacgtttccttgattctgagacatatctacataaaca 45940927  T
Q  800 aatcggtgatcaaaaccta 818  Q
    | |||| ||||||||||||    
T  45940928 attcggcgatcaaaaccta 45940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 545 - 818
Target Start/End: Complemental strand, 43888572 - 43888298
Alignment:
Q  545 gtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagat 643  Q
    |||||| |||||||| || ||||||| | ||||||||||| ||||||||||||| | ||| |||||||||||||||||||| |||||| |||  ||  |     
T  43888572 gtcacacaagtcaatcggattgtccttgacagtccctggggcacctgcttttggctgagggccaaaatagcatgtcctcccgctcctcctcaacctcaaa 43888473  T
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcac 743  Q
    ||||| ||||||  |||||| |||| |||| ||||||| || |||||| ||  | ||  || ||||||||| | ||||||| ||||| |||| || ||||    
T  43888472 tgattatacaccaacacctttgaatacttcttttttacggatccatcacatgtgattccgtgccatgtcatcgacgatttttctttcttcttgtcgtcac 43888373  T
Q  744 cctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    |||||||||| ||||||| |||    || ||||||||||||||||||||||||||| |||| |||||||||||||    
T  43888372 cctcctttttgttcaacttaacgtttccctgattctgagacatatctacataaacagatcgatgatcaaaaccta 43888298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 296 - 475
Target Start/End: Complemental strand, 4910962 - 4910783
Alignment:
Q  296 attattcaatacacaactatattcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactt 395  Q
    |||||||||||| | ||| || |||| |||||||||||||  ||||||||  |||||||||||||| ||| |||| |||||||||||||||||   ||||    
T  4910962 attattcaatacgcgactttaatcgaaattattcaatatgttactttattcaaaattattcaatacacgactttaatcgaaattattcaatacgttactt 4910863  T
Q  396 taaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatgtaccaaaatacgcacggcatat 475  Q
    ||    ||||||||||||| |||||||||||||| |||||| ||||||||||| ||||||||||||| ||| ||||||||    
T  4910862 tattcaaaattattcaatacgcgactttattcaaagtaccataatgtaaaccataatgtaccaaaatgcgcgcggcatat 4910783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 504 - 678
Target Start/End: Complemental strand, 49791052 - 49790877
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| ||||||||||||||  ||||| |||||||||||||||| |||| ||||||||||| ||||||||||||| | ||    
T  49791052 caattagatattacaacccattacatttaatcatcttcctcatcacacaagtcaattgggttgttctcgacagtccctggggcacctgcttttggctgag 49790953  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttt 678  Q
    |||||||||| ||||||||||| |||||| |||  || || ||||| |||| | ||||||||||||||||| ||||    
T  49790952 gaccaaaatatcatgtcctcccgctcctcctcaacctcgaatgattatacatcagcaccttcgaatccttcttttt 49790877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 24076212 - 24076378
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||||||||||||| |||||| | |||||||||||| |||||| ||| |||||||||||||||||  ||| ||| |||||||||||||||||| ||    
T  24076212 caattagacattacaagtcattacattcaatcatcttcctcgtcacacaagacaattgggttgtcctcgagagtgcctggggcacctgcttttggttgag 24076311  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatc 669  Q
    |||| ||||| || ||||| || |||||| |||  ||  | || |||||||||||||| ||||||||    
T  24076312 gaccgaaataacaagtccttccgctcctcctcaacctgtaatggttgtacaccggcactttcgaatc 24076378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 347 - 475
Target Start/End: Original strand, 9718188 - 9718316
Alignment:
Q  347 gaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaac 446  Q
    ||||||||||||||||||| |||| || |||||||||||||| |||||||||  |||||||||||| | |||| |||||| || |||||| ||||| ||     
T  9718188 gaaattattcaatacgcgagtttaatcaaaattattcaatacgcgactttaatcgaaattattcaaaacgcgattttattaaaagtaccataatgtcaaa 9718287  T
Q  447 caaaatgtaccaaaatacgcacggcatat 475  Q
    ||||||||| |||||| ||||||||||||    
T  9718288 caaaatgtagcaaaatgcgcacggcatat 9718316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 583 - 746
Target Start/End: Complemental strand, 34528860 - 34528697
Alignment:
Q  583 ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttaca 682  Q
    |||||||  |||||||| |||||||||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||| ||||| ||||| |     
T  34528860 ggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcg 34528761  T
Q  683 gaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
    ||||||||  |  |  ||| || ||| ||||||||||||||| ||||  |||||||||||||||    
T  34528760 gaaccatcgcaaacaatttcgtgccacgtcataggcgatttttctttgttcttctcatcaccct 34528697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 34152373 - 34152164
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||  |||||| || |  ||||||||||| |||||   ||||||| |||||||||||||||||||||||| |||||| |||    
T  34152373 tcttcctcgtcacacaagtcaaccgggttgcccgctacagtccctggggcaccttgatttggttgaggaccaaaatagcatgtcctcccgctcctcctca 34152274  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || |||||||||||||||||||||||| |||| |||||| | ||||||||| |  |  ||| ||  |||||||||||| ||||| ||||  ||||    
T  34152273 acctcgactgattgtacaccggcaccttcgaaccctt-cttttttcggaaccatcacaaacaatttcgtgtcatgtcataggcaatttttctttgttctt 34152175  T
Q  736 ctcatcaccct 746  Q
    |||||||||||    
T  34152174 ctcatcaccct 34152164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 240 - 373
Target Start/End: Complemental strand, 4910964 - 4910831
Alignment:
Q  240 aaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattcaatatgcgac 339  Q
    ||||||||||||||||||||||| |||||||| ||||||| |  ||| ||||| | |||||||||||||| ||| || |||| ||||||||||| |  ||    
T  4910964 aaattattcaatacgcgactttaatcgaaattattcaatatgttactttattcaaaattattcaatacacgactttaatcgaaattattcaatacgttac 4910865  T
Q  340 tttatttgaaattattcaatacgcgattttattc 373  Q
    ||||||  |||||||||||||||||| |||||||    
T  4910864 tttattcaaaattattcaatacgcgactttattc 4910831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 582 - 746
Target Start/End: Complemental strand, 49422799 - 49422635
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttac 681  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||| ||||| ||||| |    
T  49422799 gggcaccttgttttggttgaggaccaaaatagcatgtcctcccactcctcctcaacctcgactgattgtacaccggcaccttcgaacccttctttttttc 49422700  T
Q  682 agaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
     ||||||||| |  |  || |||  ||||||||||| |||||| ||||   ||||||||||||||    
T  49422699 ggaaccatcacaaacaattatgtgtcatgtcataggtgatttttctttgtccttctcatcaccct 49422635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 540 - 746
Target Start/End: Original strand, 56140016 - 56140224
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggc 638  Q
    |||| |||||| |||||||| |||||| || |  ||||||||||| |||||  |||||||| |||||||||||||||||||||||| |||||| |||  |    
T  56140016 tcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacc 56140115  T
Q  639 tagattgattgtacaccggcaccttcgaatccttc-ctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttct 737  Q
    | || ||||||||||| |||||||||||| |||||  ||||| ||||||||||  |  |  ||  || ||| ||||||||||||||| ||||  ||||||    
T  56140116 tcgagtgattgtacactggcaccttcgaacccttcttttttttcagaaccatcgcaaacaattccgtgccacgtcataggcgatttttctttgttcttct 56140215  T
Q  738 catcaccct 746  Q
    |||||||||    
T  56140216 catcaccct 56140224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 583 - 746
Target Start/End: Original strand, 49572267 - 49572430
Alignment:
Q  583 ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttaca 682  Q
    |||||||  |||||||| ||||||||||||||||||| |||| |||||| |||  || || |||||||||||||||||| ||||| ||||| ||||| |     
T  49572267 ggcaccttgttttggttgaggaccaaaatagcatgtcatcccgctcctcctcaacctggactgattgtacaccggcaccctcgaacccttctttttttcg 49572366  T
Q  683 gaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
    ||||||||| |  |  || ||| | ||||||||||||||||| ||||  |||||||||||||||    
T  49572367 gaaccatcacaaacaattatgtgctatgtcataggcgatttttctttgttcttctcatcaccct 49572430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 41794011 - 41793857
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || || ||||| |||||| |  ||||||||| || ||||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  41794011 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 41793912  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  41793911 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 41793857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 540 - 746
Target Start/End: Original strand, 1043846 - 1044053
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggc 638  Q
    |||| |||||| |||||||| |||||  || |  ||||||||| |||||||  |||||||| |||||||||||||||||| ||| | |||||| |||  |    
T  1043846 tcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccttgttttggttgaggaccaaaatagcatgttctctcgctcctcctcaacc 1043945  T
Q  639 tagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctc 738  Q
    | || |||||||||||||||||||||||| ||||| ||||| | ||||||||  |  |  || ||| ||| |||||| |||||||| ||||  |||||||    
T  1043946 tcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattatgtgccacgtcatatgcgatttttctttgttcttctc 1044045  T
Q  739 atcaccct 746  Q
    ||||||||    
T  1044046 atcaccct 1044053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 644 - 818
Target Start/End: Original strand, 47873261 - 47873438
Alignment:
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcac 743  Q
    ||||| |||||| ||||||||||||||||| |||| || || |||||| ||  | || ||| ||||||||| || |||||| ||||| |||| || ||||    
T  47873261 tgattatacaccagcaccttcgaatccttctttttgacggatccatcacatgtgattctgtgccatgtcatcggtgatttttctttcttcttgtcgtcac 47873360  T
Q  744 cctcctttttatt---caactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||||| || ||   ||||| |||    || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  47873361 cctccttcttcttgttcaactcaacgtttccctgattctgagacatatctacataaacaaatcggcgatcaaaaccta 47873438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 574 - 679
Target Start/End: Complemental strand, 956504 - 956398
Alignment:
Q  574 cagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatcctt 672  Q
    ||||||||||| |||||  |||||||| |||||||||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||| ||||    
T  956504 cagtccctggggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctggactgattgtacaccggcaccttcgaaccctt 956405  T
Q  673 ccttttt 679  Q
    | |||||    
T  956404 ctttttt 956398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 6176524 - 6176370
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  6176524 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 6176425  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  6176424 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 6176370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 21016386 - 21016232
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  21016386 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 21016287  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  21016286 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 21016232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 593 - 746
Target Start/End: Complemental strand, 44559357 - 44559205
Alignment:
Q  593 tttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaa 692  Q
    ||||||| |||||||||||||||||||||||| |||||| |||  || || ||||||||||||||||||||| || |||| |||||| |||||||||||     
T  44559357 tttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcaaaccctt-cttttttcagaaccatcac 44559259  T
Q  693 attcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
    |  |  |||  |  |||||||||||||||||| ||||  |||||| ||||||||    
T  44559258 aaacaatttcatgtcatgtcataggcgatttttctttgttcttcttatcaccct 44559205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 205 - 345
Target Start/End: Complemental strand, 4910972 - 4910832
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaa 304  Q
    |||| ||||| ||||| ||||||| |||||| |||||||||||||||| |  ||||||||| ||||| |||||||| | ||| || |||| |||||||||    
T  4910972 tttaatcaaaattattcaatacgcgactttaatcgaaattattcaatatgttactttattcaaaattattcaatacacgactttaatcgaaattattcaa 4910873  T
Q  305 tacacaactatattcgatattattcaatatgcgactttatt 345  Q
    |||   ||| ||||| | ||||||||||| |||||||||||    
T  4910872 tacgttactttattcaaaattattcaatacgcgactttatt 4910832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 213 - 397
Target Start/End: Complemental strand, 23620277 - 23620093
Alignment:
Q  213 aatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaac 312  Q
    |||||||| |||| ||||||||||||||| ||||| ||||||  |||||||||||| || || |||| || ||| |||||||  ||||  ||||| | ||    
T  23620277 aatttattcaatatgcaactttattcgaatttatttaatacgttactttattcgaatttatttaatatgctactttattcgaatttatataatacgctac 23620178  T
Q  313 tatattcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
    | |||||||| ||||| |||| || | |||||||||| ||||| ||||||| | |||  ||||| ||||||||||| | ||||||    
T  23620177 tttattcgattttatttaatacgctattttatttgaatttatttaatacgcaaattttatcgaatttattcaatacgctacttta 23620093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 539 - 746
Target Start/End: Original strand, 37867572 - 37867780
Alignment:
Q  539 ttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcagg 637  Q
    ||||| |||||| ||||||||||||| | || |  ||||||||||| |||||  |||| ||| |||||||||||| ||||||||||| |||||| |||      
T  37867572 ttcctcgtcacacaagtcaattgggtcgcccgctacagtccctggggcaccttgtttttgttgaggaccaaaataacatgtcctcccgctcctcctcaac 37867671  T
Q  638 ctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttct 737  Q
    || || ||||| |||||||||||||||||| ||||  ||||| | ||||||||| |  |  |||||| |||  |||||||||||||| ||||  | ||||    
T  37867672 ctcgagtgattatacaccggcaccttcgaacccttatttttttcggaaccatcacaaacaattttgtgccacatcataggcgatttttctttgttattct 37867771  T
Q  738 catcaccct 746  Q
     ||||||||    
T  37867772 tatcaccct 37867780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 13867150 - 13867213
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaa 268  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  13867150 tttattcaaatttatttaatacgcaactttattcgaatttatttaatacgctactttattcgaa 13867213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 583 - 690
Target Start/End: Original strand, 39589926 - 39590033
Alignment:
Q  583 ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttaca 682  Q
    |||||||  |||||||| |||||||||||||||||||||||| |||||| |||  ||  | |||||||||||||||||||||||| ||||| ||||| |     
T  39589926 ggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcaagtgattgtacaccggcaccttcgaacccttctttttttcg 39590025  T
Q  683 gaaccatc 690  Q
    ||||||||    
T  39590026 gaaccatc 39590033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 537 - 679
Target Start/End: Original strand, 49095743 - 49095886
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  49095743 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 49095842  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
      || || |||||||||||||||||||||||| ||||| |||||    
T  49095843 acctcgagtgattgtacaccggcaccttcgaacccttctttttt 49095886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 351 - 458
Target Start/End: Complemental strand, 43888745 - 43888638
Alignment:
Q  351 ttattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaa 450  Q
    |||||||| |||||| |||| |||||||||||||| |||||| |||||  |||||||||||| |  ||| ||||||||| ||||||| |||| || ||||    
T  43888745 ttattcaaaacgcgactttaatcgaaattattcaaaacacgattttaattgaaattattcaaaacacgaatttattcaaagtaccactatgtcaagcaaa 43888646  T
Q  451 atgtacca 458  Q
    ||||||||    
T  43888645 atgtacca 43888638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 537 - 679
Target Start/End: Original strand, 55797741 - 55797884
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || |||||||| |||||| |  |||||| || || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  55797741 tcttcctcgtcacacaaatcaattggcttgtccgctacagtccatgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 55797840  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
      || || ||||||||||| |||||||||||| ||||| |||||    
T  55797841 acctcgagtgattgtacactggcaccttcgaacccttctttttt 55797884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 6281612 - 6281400
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |   |||||||||| |||||  ||||| || |||| ||||||||||||||||||  |||||| |||    
T  6281612 tcttcctcgtcacacaagtcaatcgggttgcccgctaaagtccctggggcaccttgttttgattgaggatcaaaatagcatgtcctcctgctcctcctca 6281513  T
Q  636 ggctagattgattgtacaccggcaccttcgaatcc--ttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatc 733  Q
      || || |||||||||||||||||||||||| ||  ||  ||||| | ||||||||| |  |  ||||||  || |||||||| |||||| ||||  ||    
T  6281512 acctcgagtgattgtacaccggcaccttcgaacccttttttttttttcggaaccatcacaaacaattttgtgtcacgtcataggtgatttttctttgttc 6281413  T
Q  734 ttctcatcaccct 746  Q
    |||||||||||||    
T  6281412 ttctcatcaccct 6281400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 13851103 - 13850977
Alignment:
Q  12 tatatagttaattctgcataatacatgnnnnnnngaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatcc 111  Q
    ||||||||| |||||||||||||||||       |||  |||| |||||||||||||||||||||||||||| | |||||||  |||||| |  ||||||    
T  13851103 tatatagttgattctgcataatacatgttgttttgaaaggaacaataaaacttccgggtgaatgcttgagagatgttgtttaacaagtttaaccttatcc 13851004  T
Q  112 aacttcagaggtaaaacaattgttgta 138  Q
    || || |||||||| | ||||||||||    
T  13851003 aattttagaggtaagataattgttgta 13850977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 13866617 - 13866491
Alignment:
Q  12 tatatagttaattctgcataatacatgnnnnnnngaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatcc 111  Q
    ||||||||  |||||||||||||||||       |||  |||| |||||||||||||||||||||||||||| | |||||||  |||||| |  ||||||    
T  13866617 tatatagtggattctgcataatacatgttgttttgaaaggaacaataaaacttccgggtgaatgcttgagagctgttgtttaacaagtttgaccttatcc 13866518  T
Q  112 aacttcagaggtaaaacaattgttgta 138  Q
    || ||||||||||  ||||||||||||    
T  13866517 aatttcagaggtatgacaattgttgta 13866491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 213 - 426
Target Start/End: Complemental strand, 23620304 - 23620091
Alignment:
Q  213 aatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaac 312  Q
    |||||||||||||||||| |||  ||||| |||||||||| || |||||||||||| || || ||||||  ||| |||||||  ||||| ||||  | ||    
T  23620304 aatttatttaatacgcaaattttatcgaatttattcaatatgcaactttattcgaatttatttaatacgttactttattcgaatttatttaatatgctac 23620205  T
Q  313 tatattcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaa 412  Q
    | |||||||  ||||  |||| || |||||||| ||  ||||| ||||||| |||||||| ||| ||||| ||||| | | ||| |  ||| ||||||||    
T  23620204 tttattcgaatttatataatacgctactttattcgattttatttaatacgctattttatttgaatttatttaatacgcaaattttatcgaatttattcaa 23620105  T
Q  413 tatgcgactttatt 426  Q
    || || ||||||||    
T  23620104 tacgctactttatt 23620091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 582 - 667
Target Start/End: Original strand, 42887445 - 42887530
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaa 667  Q
    |||||||| ||||||||| |||||||||||| ||||||||||| |||||| |||  || || |||||||||||| |||||||||||    
T  42887445 gggcaccttcttttggttgaggaccaaaataacatgtcctcccgctcctcctcaacctcgactgattgtacaccagcaccttcgaa 42887530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 51427289 - 51427079
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaa-tagcatgtcctccctctcctcgtc 634  Q
    ||||||| |||||| |||||||| |||||| || |   |||||||||| | |||  |||||||| |||||||||| |||||||||||||| |||||| ||    
T  51427289 tcttcctcgtcacacaagtcaatcgggttgcccgctatagtccctggggcgccttgttttggttgaggaccaaaaatagcatgtcctcccgctcctcctc 51427190  T
Q  635 aggctagattgattgtacaccggcaccttcgaatccttc-ctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatc 733  Q
    |  || || | ||||||||| ||||||||||||||||||  ||||| | ||||||||| |  |  || |||  ||||||||| |||||||| ||||  ||    
T  51427189 aacctcgactaattgtacactggcaccttcgaatccttcttttttttcggaaccatcacaaacaattgtgt--catgtcatacgcgatttttctttgttc 51427092  T
Q  734 ttctcatcaccct 746  Q
    |||||||||||||    
T  51427091 ttctcatcaccct 51427079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 18413035 - 18413127
Alignment:
Q  46 gaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| |||| |||||||||||||||||||  ||||||||| |||||||| |||||| |||||| | || ||||||||||| | ||||||||||    
T  18413035 gaatggaacaataaaacttccgggtgaatatttgagagttgttgtttagcaagtttgaatttacctaatttcagaggtaagataattgttgta 18413127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 292
Target Start/End: Complemental strand, 4910918 - 4910831
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattc 292  Q
    |||||||||| ||||| ||||| | |||||| ||||||||||||||||||  ||||||||| ||||| |||||||||| ||| |||||    
T  4910918 tttattcaaaattattcaatacacgactttaatcgaaattattcaatacgttactttattcaaaattattcaatacgcgactttattc 4910831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 592 - 679
Target Start/End: Complemental strand, 40352929 - 40352842
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||  || || ||||||||||| |||||||||||| ||||| |||||    
T  40352929 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacactggcaccttcgaacccttctttttt 40352842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 23620258 - 23620156
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaa 304  Q
    ||||||| |||||||||||||||  |||||||||||| ||||| |||| || |||||||||||| || |  ||||||| ||| |||||||| ||||| ||    
T  23620258 tttattcgaatttatttaatacgttactttattcgaatttatttaatatgctactttattcgaatttatataatacgctactttattcgattttatttaa 23620159  T
Q  305 tac 307  Q
    |||    
T  23620158 tac 23620156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 24076088 - 24076146
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttat 263  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  24076088 tttaatcaaatttattcaatacgcaactttaatcgaaattattcaatacgtgactttat 24076146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 374 - 475
Target Start/End: Complemental strand, 21411231 - 21411130
Alignment:
Q  374 gaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatgtaccaaaatacgcacggcat 473  Q
    |||||||||||||||||||||||||   ||||||||||| | |||| |||||| || |||||| ||||| || ||||||||| |||||| ||| || |||    
T  21411231 gaaattattcaatacacgactttaatcaaaattattcaaaacgcgattttatttaaagtaccataatgtcaagcaaaatgtagcaaaatgcgcgcgacat 21411132  T
Q  474 at 475  Q
    ||    
T  21411131 at 21411130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 374 - 475
Target Start/End: Original strand, 21412214 - 21412315
Alignment:
Q  374 gaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatgtaccaaaatacgcacggcat 473  Q
    |||||||||||||||||||||||||   ||||||||||| | |||| |||||| || |||||| ||||| || ||||||||| |||||| ||| || |||    
T  21412214 gaaattattcaatacacgactttaatcaaaattattcaaaacgcgattttatttaaagtaccataatgtcaagcaaaatgtagcaaaatgcgcgcgacat 21412313  T
Q  474 at 475  Q
    ||    
T  21412314 at 21412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 574 - 665
Target Start/End: Complemental strand, 4784393 - 4784301
Alignment:
Q  574 cagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcg 665  Q
    ||||||||||| ||| | ||||||||| |||||||||||||||||||| ||| |||||| |||  || || |||||||||||||||| |||||    
T  4784393 cagtccctggggcacattcttttggttgaggaccaaaatagcatgtccccccgctcctcctcaacctcgaatgattgtacaccggcaacttcg 4784301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 13855356 - 13855416
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattc 265  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||| || |||||||||    
T  13855356 tttattcaaatttatttaatacgctactttattcgaatttatttaatatgctactttattc 13855416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 24076056 - 24076136
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatac 307  Q
    ||||||||| ||||| |||||||||| ||||||||| || || || |||||||||||||| || |||| ||||||||||||    
T  24076056 gcaactttaatcgaatttattcaatatgcgactttaatcaaatttattcaatacgcaactttaatcgaaattattcaatac 24076136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 367 - 454
Target Start/End: Original strand, 25145495 - 25145582
Alignment:
Q  367 tttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatgt 454  Q
    |||| ||||| ||||||||||| |||||||||  ||| ||||||||||||| ||||||| ||| || ||| |||||||| ||||||||    
T  25145495 tttaatcgaatttattcaatacgcgactttaattgaatttattcaatatgcaactttatacaaagtcccaaaatgtaaatcaaaatgt 25145582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 347 - 412
Target Start/End: Complemental strand, 4784614 - 4784549
Alignment:
Q  347 gaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaa 412  Q
    |||||||||||| |||||| |||| |||||||||||||| || |||||||||  ||||||||||||    
T  4784614 gaaattattcaaaacgcgactttaatcgaaattattcaaaacgcgactttaatcgaaattattcaa 4784549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 24076072 - 24076145
Alignment:
Q  324 ttattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
    |||||||||||||||||||| |  || ||||||||||||| | |||| |||||||||||||||||  |||||||    
T  24076072 ttattcaatatgcgactttaatcaaatttattcaatacgcaactttaatcgaaattattcaatacgtgacttta 24076145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 773 - 818
Target Start/End: Complemental strand, 36775312 - 36775267
Alignment:
Q  773 tgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||    
T  36775312 tgattctgagacatatctacataaacaaatcagcgatcaaaaccta 36775267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 49791177 - 49791068
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| |||||||||||||| |||||| |||||  ||||||||| || | || | ||||||||| || |||  |||| || ||    
T  49791177 aattattcaaaacgcgactttaatcgaaattattcaaaacacgattttaattgaaattatttaaaacgcaaatttattcaaagtgccaatatgtcaagca 49791078  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  49791077 aaatgtacca 49791068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 4784610 - 4784542
Alignment:
Q  216 ttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaa 284  Q
    ||||| || |||| |||||| |||||||||||||| ||||||||||| |||||||| ||||| ||||||    
T  4784610 ttattcaaaacgcgactttaatcgaaattattcaaaacgcgactttaatcgaaattattcaaaacgcaa 4784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 9718181 - 9718253
Alignment:
Q  232 tttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaa 304  Q
    |||| ||||||||||||||||||||| |||| || ||||| |||||||||| ||| || |||| |||||||||    
T  9718181 tttaatcgaaattattcaatacgcgagtttaatcaaaattattcaatacgcgactttaatcgaaattattcaa 9718253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 774 - 818
Target Start/End: Complemental strand, 14969143 - 14969099
Alignment:
Q  774 gattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||||||||||||||||||||||||||| || ||||||||||||    
T  14969143 gattctgagacatatctacataaacaaattggcgatcaaaaccta 14969099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 740
Target Start/End: Complemental strand, 17054499 - 17054303
Alignment:
Q  545 gtcacataagtcaattgggttgtcctcgccagtccctgggc-acctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagat 643  Q
    |||||| ||||||||||||||||| ||  || ||| ||||  |||||||||||| | ||||| ||| |||||||| ||||| ||| ||||||  ||  |     
T  17054499 gtcacacaagtcaattgggttgtcatcaacaatccatggggtacctgcttttggctgaggacaaaattagcatgtactcccgctcgtcgtcaacctcaac 17054400  T
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcat 740  Q
    ||||| |||||| |||| ||||||||  || |||| || ||||||||| ||  | ||  || ||||||||| ||||||||| ||||| |||| ||||    
T  17054399 tgattatacaccagcacattcgaatcagtctttttgacggaaccatcacatgtgattccgtgccatgtcatcggcgatttttctttcttcttgtcat 17054303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 385
Target Start/End: Original strand, 9718186 - 9718253
Alignment:
Q  318 tcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaa 385  Q
    |||| ||||||||||| |||| |||| |  |||||||||||||||||| |||| ||||||||||||||    
T  9718186 tcgaaattattcaatacgcgagtttaatcaaaattattcaatacgcgactttaatcgaaattattcaa 9718253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 13866975 - 13867042
Alignment:
Q  201 aacttttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaa 268  Q
    ||||||||||| ||||||||||||||||  ||||||| ||| ||||| ||||||| ||||| ||||||    
T  13866975 aacttttattcgaatttatttaatacgcttctttatttgaatttatttaatacgctactttgttcgaa 13867042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 775 - 818
Target Start/End: Complemental strand, 17045644 - 17045601
Alignment:
Q  775 attctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  17045644 attctgagacatatctacataaacaaattggcgatcaaaaccta 17045601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 441
Target Start/End: Original strand, 24076059 - 24076162
Alignment:
Q  338 actttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccac 437  Q
    |||||| | ||| |||||||||| |||| |||| || || ||||||||||| | |||||||  |||||||||||||| | |||||||| ||| ||||||     
T  24076059 actttaatcgaatttattcaatatgcgactttaatcaaatttattcaatacgcaactttaatcgaaattattcaatacgtgactttatccaaagtaccaa 24076158  T
Q  438 aatg 441  Q
    ||||    
T  24076159 aatg 24076162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 504 - 583
Target Start/End: Original strand, 47871154 - 47871233
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgg 583  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| ||||||||||||||||||||| || |||||||    
T  47871154 caattagatattacaacccattacattcaatcatcttcctcctcacacaagtcaattgggttgtcctcgacattccctgg 47871233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 3394077 - 3394123
Alignment:
Q  195 taatgtaacttttattcaaatttatttaatacgcaactttattcgaa 241  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||||    
T  3394077 taatgtaacttttattcgaatttattcaatacgcagctttattcgaa 3394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 4784615 - 4784549
Alignment:
Q  238 cgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaa 304  Q
    ||||||||||||| ||||||||||| |||||||| ||||| |||| ||| || |||| |||||||||    
T  4784615 cgaaattattcaaaacgcgactttaatcgaaattattcaaaacgcgactttaatcgaaattattcaa 4784549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 4784611 - 4784549
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaa 385  Q
    ||||||||| | ||||||||| | |||||||||||| |||||| |||| ||||||||||||||    
T  4784611 attattcaaaacgcgactttaatcgaaattattcaaaacgcgactttaatcgaaattattcaa 4784549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 375 - 429
Target Start/End: Complemental strand, 4910964 - 4910910
Alignment:
Q  375 aaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaa 429  Q
    |||||||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  4910964 aaattattcaatacgcgactttaatcgaaattattcaatatgttactttattcaa 4910910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 9718192 - 9718258
Alignment:
Q  216 ttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgc 282  Q
    ||||| ||||||| | |||| || ||||||||||||||||||||||| |||||||| ||||| ||||    
T  9718192 ttattcaatacgcgagtttaatcaaaattattcaatacgcgactttaatcgaaattattcaaaacgc 9718258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 13866924 - 13867042
Alignment:
Q  259 tttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaac-tatattcgatattattcaatatgcgactttatttgaaattattca 357  Q
    |||||||||| || || ||||||||||| |||||||  ||||| |||||||||| | |||||||  ||||| |||| ||  ||||||||||| ||||| |    
T  13866924 tttattcgaatttatttaatacgcaactttattcgaatttatttaatacacaacttttattcgaatttatttaatacgcttctttatttgaatttattta 13867023  T
Q  358 atacgcgattttattcgaa 376  Q
    |||||| | ||| ||||||    
T  13867024 atacgctactttgttcgaa 13867042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 2773980 - 2774089
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| |||||||||||||| ||  || |||||  ||||||||| || | || | ||||||||| ||||||  |||| || ||    
T  2773980 aattattcaaaacgcgactttaatcgaaattattcaaaacgtgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagca 2774079  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  2774080 aaatgtacca 2774089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 582 - 667
Target Start/End: Original strand, 9490631 - 9490716
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaa 667  Q
    ||||||||  |||||| | |||||||||||||||||||||||  |||||| |||  || || ||||||||||||| ||| ||||||    
T  9490631 gggcaccttgttttggctgaggaccaaaatagcatgtcctccagctcctcctcaacctcgagtgattgtacaccgacacattcgaa 9490716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 9718218 - 9718267
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttatt 372  Q
    ||||||||||| ||||||||| | |||||||||||| |||||||||||||    
T  9718218 attattcaatacgcgactttaatcgaaattattcaaaacgcgattttatt 9718267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 43888745 - 43888672
Alignment:
Q  324 ttattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
    |||||||| | ||||||||| | |||||||||||| || |||||||| | |||||||||||| |||||| ||||    
T  43888745 ttattcaaaacgcgactttaatcgaaattattcaaaacacgattttaattgaaattattcaaaacacgaattta 43888672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 47871027 - 47871136
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| ||||||||||| |||||||||||||| || ||| ||| |  ||||||||| || | || | |||||| || ||||||  |||| || ||    
T  47871027 aattattcaaaacgcgattttaatcgaaattattcaaaacgcgattttcattgaaattatttaaaacgcaaatttattaaaagtaccaatatgtcaagca 47871126  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  47871127 aaatgtacca 47871136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 23620151 - 23620091
Alignment:
Q  204 ttttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttatt 264  Q
    |||||||  |||||||||||||||||| |||  ||||| ||||||||||||| ||||||||    
T  23620151 ttttatttgaatttatttaatacgcaaattttatcgaatttattcaatacgctactttatt 23620091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 24076069 - 24076137
Alignment:
Q  213 aatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacg 281  Q
    |||||||| |||| || |||||| || || ||||||||||||| |||||| |||||||| |||||||||    
T  24076069 aatttattcaatatgcgactttaatcaaatttattcaatacgcaactttaatcgaaattattcaatacg 24076137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 387
Target Start/End: Complemental strand, 4910964 - 4910925
Alignment:
Q  348 aaattattcaatacgcgattttattcgaaattattcaata 387  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  4910964 aaattattcaatacgcgactttaatcgaaattattcaata 4910925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 9718208 - 9718267
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttatt 264  Q
    |||| ||||| ||||| ||||||| |||||| |||||||||||||| |||||| ||||||    
T  9718208 tttaatcaaaattattcaatacgcgactttaatcgaaattattcaaaacgcgattttatt 9718267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 13855442 - 13855505
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaa 268  Q
    ||||||| |||||||||||||||  ||||||||| || ||||| || |||| ||||||||||||    
T  13855442 tttattcgaatttatttaatacgttactttattcaaatttatttaagacgctactttattcgaa 13855505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 23620204 - 23620125
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaa 284  Q
    ||||||| ||||||| |||||||| |||||||||||  ||||| ||||||| | |||||| ||| || || |||||||||    
T  23620204 tttattcgaatttatataatacgctactttattcgattttatttaatacgctattttatttgaatttatttaatacgcaa 23620125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 28170981 - 28170942
Alignment:
Q  214 atttatttaatacgcaactttattcgaaattattcaatac 253  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  28170981 atttattcaatacgcaactttattcgaatttattcaatac 28170942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 31324488 - 31324402
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| ||| |||||||||||||||||||||||| | | |||||| |||||| || |||||  | |||| |||||| ||||||||||||    
T  31324488 gaacaatagaacttccgggtgaatgcttgagagctgtcgtttagcaagtttgaa-ttatctcatttcaaaggtaagacaattgttgta 31324402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 3394161 - 3394195
Alignment:
Q  219 tttaatacgcaactttattcgaaattattcaatac 253  Q
    ||||||||||||||||||||||| |||||||||||    
T  3394161 tttaatacgcaactttattcgaatttattcaatac 3394195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 9718180 - 9718238
Alignment:
Q  366 ttttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgacttta 424  Q
    ||||| ||||||||||||||||| ||| |||||   ||||||||||||| |||||||||    
T  9718180 ttttaatcgaaattattcaatacgcgagtttaatcaaaattattcaatacgcgacttta 9718238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 17212043 - 17212089
Alignment:
Q  195 taatgtaacttttattcaaatttatttaatacgcaactttattcgaa 241  Q
    ||||||||||||||||| |||||||| ||||||||| ||| ||||||    
T  17212043 taatgtaacttttattcgaatttattcaatacgcaaattttttcgaa 17212089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 773 - 818
Target Start/End: Original strand, 22437990 - 22438036
Alignment:
Q  773 tgattctgagacatatctacat-aaacaaatcggtgatcaaaaccta 818  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  22437990 tgattctgagacatatctacataaaaaaaatcggcgatcaaaaccta 22438036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 24607742 - 24607788
Alignment:
Q  195 taatgtaacttttattcaaatttatttaatacgcaactttattcgaa 241  Q
    |||||||| |||||||| |||||||| |||| |||||||||||||||    
T  24607742 taatgtaatttttattcgaatttattcaatatgcaactttattcgaa 24607788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 773 - 818
Target Start/End: Complemental strand, 2567895 - 2567850
Alignment:
Q  773 tgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    |||||||||||||||| |||||| |||| |||| ||||||||||||    
T  2567895 tgattctgagacatatttacatacacaactcggcgatcaaaaccta 2567850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 9717884 - 9717925
Alignment:
Q  161 aatgtaatgataggacatatttaggaactttatttaatgtaa 202  Q
    |||||||||||| |||||||||||||||||||| || |||||    
T  9717884 aatgtaatgatatgacatatttaggaactttatgtattgtaa 9717925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 21170426 - 21170535
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| |||||||||||  | |  ||| |||||  |||||||||||| | |||| ||||||||| ||| ||  |||| || ||    
T  21170426 aattattcaaaacgcgactttaatcgaaattatttcaaatgcgattttaattgaaattattcaaaacgcgaatttattcaaagtatcaatatgtcaagca 21170525  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  21170526 aaatgtacca 21170535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 23620501 - 23620432
Alignment:
Q  56 ataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaa 125  Q
    |||||| ||||||||||||| ||||||||| |||||||  |||||| |  ||||| || |||||||||||    
T  23620501 ataaaatttccgggtgaatgtttgagagttgttgtttaacaagtttgaccttatcaaatttcagaggtaa 23620432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 24607820 - 24607861
Alignment:
Q  214 atttatttaatacgcaactttattcgaaattattcaatacgc 255  Q
    |||| ||||||||| ||||||||||||| |||||||||||||    
T  24607820 atttttttaatacgtaactttattcgaatttattcaatacgc 24607861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 28170979 - 28170934
Alignment:
Q  351 ttattcaatacgcgattttattcgaaattattcaatacacgacttt 396  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||    
T  28170979 ttattcaatacgcaactttattcgaatttattcaatacacaacttt 28170934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 1e-74; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 504 - 824
Target Start/End: Complemental strand, 16531313 - 16530998
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    ||||||| |||||||||   ||||| | ||| |||||||| |||||  || |||||||||||||||||| |||||| |||| ||||||||||||||| ||    
T  16531313 caattaggcattacaagccgttacattcaattatcttcctcgtcactgaactcaattgggttgtcctcgacagtccttggggcacctgcttttggttgag 16531214  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    || ||||||||||||||||||| |||||| |||| ||||| | ||||||||||||||||||| |||||||| ||||||| ||||||||| ||||| || |    
T  16531213 gatcaaaatagcatgtcctcccactcctcctcagcctagaataattgtacaccggcaccttcaaatccttcttttttacggaaccatcacattcgattct 16531114  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaat 802  Q
     | ||||||||||  ||||||||||||| |||| ||||||||||||||||| ||||||||||||      ||||||||||||||||||||||||| ||||    
T  16531113 ttgccatgtcataaacgattttgctttcttcttgtcatcaccctcctttttgttcaactgaaca------tgattctgagacatatctacataaagaaat 16531020  T
Q  803 cggtgatcaaaacctaaactaa 824  Q
     | |||||||| ||||||||||    
T  16531019 tgatgatcaaatcctaaactaa 16530998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 51 - 454
Target Start/End: Complemental strand, 14772343 - 14771933
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgtaccacatatctct 150  Q
    |||| ||| |||||||| |||||||| |||||| | |||||||| | |||| |||||| || | |||||||| || ||| ||||||| | |||||| |||    
T  14772343 gaacaatagaacttccgtgtgaatgcatgagagctgttgtttagcaggtttgaatttaccccatttcagaggcaacacacttgttgtgcaacatatatct 14772244  T
Q  151 acccgaatttaatgtaatgataggacatatttaggaactttatt----taatgtaactt---ttattcaaatttatttaatacgcaactttattcgaaat 243  Q
    || ||||| ||||||||| ||||||||||||||||||||||||     ||||||||  |   ||| || || ||||| ||||||| ||||||||| ||||    
T  14772243 actcgaatgtaatgtaatcataggacatatttaggaactttatgcatgtaatgtaatgtaatttaatcgaaattattcaatacgctactttattcaaaat 14772144  T
Q  244 tattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattcaatatgcgacttta 343  Q
    ||||||||||| ||||||| |||||||| |||| ||||||||| ||||| | ||||||||||||||  || || || | |||||||||||    ||||||    
T  14772143 tattcaatacgagactttaatcgaaattattcagtacgcaactttattcaacattattcaatacacgtctttaatcaaaattattcaataccatacttta 14772044  T
Q  344 tttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgta 443  Q
    ||  | |||||||||||| ||| |||| ||||||||||||||||| | ||||||    ||||||||||||| |||||||||||||| |||||| ||||||    
T  14772043 ttcaacattattcaatacacgactttaatcgaaattattcaatacgcaactttattcaaaattattcaatacgcgactttattcaaagtaccataatgta 14771944  T
Q  444 aaccaaaatgt 454  Q
    |||||||||||    
T  14771943 aaccaaaatgt 14771933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 504 - 818
Target Start/End: Original strand, 37779233 - 37779548
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| ||||||  | |||||| | ||||||||||||  ||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| | ||    
T  37779233 caattagatattacacctcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctgcttttggctgag 37779332  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| |||| |||||||||||| |||| || || |||||| ||  | |||     
T  37779333 gaccaaaatagcatgtcctcccactcctcctcaacctcgaatgattatacaccagcactttcgaatccttctttttgacggatccatcacatgtgatttc 37779432  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaat 802  Q
    ||  |||||||| ||||||||| ||||| |||| || |||||||||||||| |||| || |||    || ||||||||||||||||||||||||||||||    
T  37779433 gtgtcatgtcatcggcgatttttctttcttcttgtcgtcaccctcctttttgttcagctcaacgtttccctgattctgagacatatctacataaacaaat 37779532  T
Q  803 cggtgatcaaaaccta 818  Q
    ||| ||||||||||||    
T  37779533 cggcgatcaaaaccta 37779548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 504 - 818
Target Start/End: Original strand, 23343604 - 23343919
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| ||||||||||||||||||||| || |||||||| ||||||||||||||| ||    
T  23343604 caattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacaatccctggggcacctgcttttggttgag 23343703  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| |||||||| |||| ||| |||| || || |||||| ||  | ||      
T  23343704 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcaaatcattctttttgacggatccatcacatgtgattcc 23343803  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaat 802  Q
    || ||||||||| | ||||||| | ||| |||| || |||||||||||||| |||| || |||    || ||||| ||| ||||||||||||||||||||    
T  23343804 gtgccatgtcatcgacgatttttcattcttcttgtcgtcaccctcctttttgttcacctcaacgtttccctgattttgaaacatatctacataaacaaat 23343903  T
Q  803 cggtgatcaaaaccta 818  Q
    ||| ||||||||||||    
T  23343904 cggcgatcaaaaccta 23343919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 504 - 818
Target Start/End: Original strand, 35186088 - 35186406
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  | ||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | ||    
T  35186088 caattagatattacaacccattacattcaatcatcttcctcatgacacaagtcaattgggttgtcctcgacagtccctggggcacttgcttttggctgag 35186187  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
     ||||||||||||||| ||||| |||||| |||  || || ||||| ||||||  |||||||||||||||| |||| || || |||||| ||  | ||||    
T  35186188 aaccaaaatagcatgttctcccgctcctcctcaacctcgaatgattatacaccaccaccttcgaatccttctttttgacggatccatcacatgtgatttt 35186287  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| || |||||| ||||| |||| || ||||||||   ||| || ||||||| |||    || |||||||||||||||||||||||||||    
T  35186288 gtgccatgtcatcggtgatttttctttcttcttgtcgtcaccctccttcttcttgttcaactcaacgtttccctgattctgagacatatctacataaaca 35186387  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||| ||||||||||||    
T  35186388 aatcggagatcaaaaccta 35186406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 39856366 - 39856048
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| |||||||||||||| || ||| ||||||||||| ||||||||||||| | ||    
T  39856366 caattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttttcttcgacagtccctggggcacctgcttttggctgag 39856267  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||  |||||| |||  || || ||||| ||||||  |||||||||||||||| |||| || || |||||| ||  | ||      
T  39856266 gaccaaaatagcatgtcctcctgctcctcctcaacctcgaatgattatacaccaacaccttcgaatccttctttttgacggatccatcacatgtgattcc 39856167  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || |||||||||  |||||||| ||||| |||| |||||||||||   ||| || ||||||| |||    || |||||||||||||||||||||||||||    
T  39856166 gtgccatgtcatcagcgatttttctttcttcttgtcatcaccctccttcttcttgttcaactcaacgtttccctgattctgagacatatctacataaaca 39856067  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||| ||||||||||||    
T  39856066 aatcggcgatcaaaaccta 39856048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 15355907 - 15355590
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggc-acctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| |  |||||||||||  ||||| |||||||||||||||||||||  ||||||||||  |||||||||||| | ||    
T  15355907 caattagatattacaacccattacattcgatcatcttcctcatcacacaagtcaattgggttgtcctcgatagtccctggggtacctgcttttggctgag 15355808  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| ||||||||||||||||| |||| || || |||||| ||  | || |    
T  15355807 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttctttttgactgatccatcacatgtgattct 15355708  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| || |||||| ||||| |||| || ||||||||   ||| || ||||||| |||    || |||||| ||||||||||||||||||||    
T  15355707 gtgccatgtcatcggtgatttttctttcttcttgtcgtcaccctccttcttcttgttcaactcaacgtgtcc-tgattccgagacatatctacataaaca 15355609  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||| ||||||||||||    
T  15355608 aatcggcgatcaaaaccta 15355590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 38044327 - 38044009
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| | ||||||||||||||| ||| ||||||||| ||||||||||||||||| ||    
T  38044327 caattagatattacaacccattacattcaatcatcttcctcatcacacaggtcaattgggttgtcgtcgacagtccctgaggcacctgcttttggttgag 38044228  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    ||| |||||||||||||||||| |||||| |||  || || ||||| ||||||  |||||||||||||||| |||| || || |||||| ||  | || |    
T  38044227 gacaaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccaacaccttcgaatccttctttttgacggatccatcatatgtgattct 38044128  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| | ||||||| ||||| ||||  | ||||||||   ||| |||||||||| |||    || |||||||||||||||||||||||||||    
T  38044127 gtgccatgtcatcgacgatttttctttcttcttgccgtcaccctcattcttcttattcaactcaacgtttccctgattctgagacatatctacataaaca 38044028  T
Q  800 aatcggtgatcaaaaccta 818  Q
     ||| | ||||||||||||    
T  38044027 tatctgcgatcaaaaccta 38044009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 504 - 820
Target Start/End: Complemental strand, 17685452 - 17685135
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| |  |||||||||||  ||||| |||||||||||||||| |||| |||||||| |||||||||||||||| | ||    
T  17685452 caattagatattacaacccattacattctatcatcttcctcatcacacaagtcaattgggttgtactcgacagtccctagggcacctgcttttggctgag 17685353  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||  |||||| |||| || ||||||||| |||| ||||| |||| | ||  | ||      
T  17685352 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgatcatacaccagcacttttgaatccttctttttgacagatccattacatgtgattcc 17685253  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaat 802  Q
    || ||||||||| | |||||||  |||| |||| |||||||||| |||||| ||||||| |||     | ||||| | ||||||||||||||| ||||||    
T  17685252 gtgccatgtcatcgacgatttttttttcttcttgtcatcaccctactttttgttcaactcaacgttttcctgattataagacatatctacatatacaaat 17685153  T
Q  803 cggtgatcaaaacctaaa 820  Q
    ||| ||||||||||||||    
T  17685152 cggcgatcaaaacctaaa 17685135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 504 - 737
Target Start/End: Complemental strand, 35586025 - 35585791
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| | ||    
T  35586025 caattagatattacaacacattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctgcttttggctgag 35585926  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| ||||||||||||||||| |||| || || |||||| ||  ||||      
T  35585925 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttctttttgacggatccatcacatgtggttcc 35585826  T
Q  703 gtaccatgtcataggcgattttgctttcatcttct 737  Q
    || ||||| ||| || |||||| ||||| ||||||    
T  35585825 gtgccatgccatcggtgatttttctttcttcttct 35585791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 24269490 - 24269177
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| |||||||||| | |||||||| |||||||| ||||||||||||||||   ||    
T  24269490 caattagatattacaacgcattacattcaatcatcttcctcatcacacaagtcaattgagctgtcctcgacagtccctagggcacctgcttttggccgag 24269391  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||  |||||| |||||||||||||| || |||| || || |||||| ||  | ||      
T  24269390 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgata-tacaccagcaccttcgaatccatctttttgacggatccatcacatgtgattcc 24269292  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaat 802  Q
    || |||||||||  ||| |||| ||||| |||| ||  ||||||||||||  ||||||| |||    || ||||||||||||||||||||||||||||||    
T  24269291 gtgccatgtcatcagcgttttttctttcttcttgtcgccaccctccttttg-ttcaactcaacgtttccctgattctgagacatatctacataaacaaat 24269193  T
Q  803 cggtgatcaaaaccta 818  Q
    |||  |||||||||||    
T  24269192 cggcaatcaaaaccta 24269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 505 - 818
Target Start/End: Complemental strand, 49260801 - 49260484
Alignment:
Q  505 aattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcagg 603  Q
    ||||||| |||||||   |||||| | ||||||||||||  ||||| ||||||||||||||||||||| |||||||| ||| |||||||||||| | |||    
T  49260801 aattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggtacctgcttttggctgagg 49260702  T
Q  604 accaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttg 703  Q
    |||||||||||||||||| || ||| || |||  || || | ||| |||||| ||||||||||||||||| |||| || || |||||| ||  | ||  |    
T  49260701 accaaaatagcatgtccttccgctcatcctcaacctcgaatcattatacaccagcaccttcgaatccttctttttgacggacccatcacatgtgattccg 49260602  T
Q  704 taccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaacaa 800  Q
    | ||||||||| || |||||| ||||| |||| || ||||||||   ||| || |||| || |||    || ||||||||||||||||||||||||||||    
T  49260601 tgccatgtcatcggtgatttttctttcttcttgtcgtcaccctccttcttcttgttcacctcaacgtttccctgattctgagacatatctacataaacaa 49260502  T
Q  801 atcggtgatcaaaaccta 818  Q
     | || ||||||||||||    
T  49260501 cttggcgatcaaaaccta 49260484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 31451851 - 31451709
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgtaccacatatctct 150  Q
    |||| ||| |||||| ||||||||||||||||||| || ||||| | |||| |||||| || | ||||||||||| ||||||||||||||||||||||||    
T  31451851 gaacaatagaacttcggggtgaatgcttgagagttgttatttagtaggtttgaatttaccctatttcagaggtaacacaattgttgtaccacatatctct 31451752  T
Q  151 acccgaatttaatgtaatgataggacatatttaggaactttat 193  Q
    || ||||| ||||||||||| ||||||||||||||||||||||    
T  31451751 actcgaatataatgtaatgaaaggacatatttaggaactttat 31451709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 545 - 818
Target Start/End: Complemental strand, 12790352 - 12790078
Alignment:
Q  545 gtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagat 643  Q
    |||||| ||| |||| |||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||||||||| ||||   |||  || ||     
T  12790352 gtcacacaaggcaatcgggttgtcctcgacagtccctggggcacctgcttttggctgaggaccaaaatagcatgtcctcccactcc---tcaacctcgaa 12790256  T
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcac 743  Q
    ||||| |||||| |||||||| |||||||| |||| || || |||||| ||  | |||||| ||||||||| | | | ||| ||||| |||| || | ||    
T  12790255 tgattatacaccagcaccttcaaatccttctttttgacggatccatcacatgtgattttgtgccatgtcatcgacaaattttctttcttcttgtcgttac 12790156  T
Q  744 cctccttt---ttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||||||   || ||||||| |||    || ||||||||||||||||||||||||| |||| | |||||||||||||    
T  12790155 cctcctttttgttgttcaactcaacgtttccctgattctgagacatatctacataaaaaaattgatgatcaaaaccta 12790078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 504 - 620
Target Start/End: Complemental strand, 31451576 - 31451459
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagt-ccctgggcacctgcttttggttcag 602  Q
    |||||||| ||||||| | |||||| | ||||||||||||||||||| ||||||||||||||||||||  |||| ||| |||||| ||||||||||| ||    
T  31451576 caattagatattacaacttattacattcaatcatcttccttgtcacacaagtcaattgggttgtcctcaacagtccccggggcacttgcttttggttgag 31451477  T
Q  603 gaccaaaatagcatgtcc 620  Q
    ||||||||||||||||||    
T  31451476 gaccaaaatagcatgtcc 31451459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 545 - 818
Target Start/End: Complemental strand, 40532459 - 40532182
Alignment:
Q  545 gtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagat 643  Q
    |||||| |||||||| | |||||||||| | ||||||| ||||||||||||||| | ||||| |||||||||||||||||| |||||| |||   |  |     
T  40532459 gtcacacaagtcaatcgagttgtcctcgacggtccctgaggcacctgcttttggctgaggacaaaaatagcatgtcctcccgctcctcctcaacttcaaa 40532360  T
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcac 743  Q
    ||||| |||||| |||  || ||||||||| |||| || || |||||| ||  ||||  || ||||||||| ||||||||| ||||| |||| || ||||    
T  40532359 tgattatacaccagcatatttgaatccttctttttgacggatccatcacatgtggttccgtgccatgtcatcggcgatttttctttcttcttatcgtcac 40532260  T
Q  744 cctccttt---ttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    | ||||||   || ||||||| |||    || |||||||||||||||| ||||||| ||||| || ||||||||||||    
T  40532259 catcctttctgttgttcaactcaacgtttccctgattctgagacatatatacataagcaaattggcgatcaaaaccta 40532182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 49925535 - 49925325
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |  ||||||||  |||||||  |||||||| |||||| ||||| ||||||||||| ||||||||||    
T  49925535 tcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctaaggcaccttgttttggttgaggaccgaaataacatgtcctcccgctcctcgtca 49925436  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || ||||||||||||||||| |||||| | ||| ||||| | ||||||||| |  |  |||||| ||| |||||||| |||||| ||||  ||||    
T  49925435 acctcgagtgattgtacaccggcacattcgaacctttctttttttcggaaccatcacaaacaattttgtgccacgtcataggtgatttttctttgttctt 49925336  T
Q  736 ctcatcaccct 746  Q
    |||||||||||    
T  49925335 ctcatcaccct 49925325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 545 - 746
Target Start/End: Original strand, 29437062 - 29437262
Alignment:
Q  545 gtcacataagtcaattgggttgtcctcgccagtccctgggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagatt 644  Q
    |||||| |||||||| |||||| || |  ||||||||||||||||  |||||||| |||||||||||| ||||||||||| |||||| |||   | || |    
T  29437062 gtcacacaagtcaatcgggttgcccgctacagtccctgggcaccttgttttggttgaggaccaaaataacatgtcctcccgctcctcctcaacttcgagt 29437161  T
Q  645 gattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcacc 744  Q
    ||||||||||| ||||||||||| ||||  ||||| | ||||||||| |  |  ||| || ||||||||||| ||||||| ||||  |||||||||||||    
T  29437162 gattgtacaccagcaccttcgaaccctt-tttttttccgaaccatcacaaacaatttcgtgccatgtcatagacgatttttctttgttcttctcatcacc 29437260  T
Q  745 ct 746  Q
    ||    
T  29437261 ct 29437262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 537 - 679
Target Start/End: Original strand, 41803346 - 41803489
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||||||||||||| |||||||| |||||| || |  |||||| |||| |||||  |||||||| |||||||||||| ||||||||||| |||||| |||    
T  41803346 tcttccttgtcacacaagtcaatcgggttgcccgctacagtccttgggacaccttgttttggttgaggaccaaaataacatgtcctcccgctcctcctca 41803445  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
      || || |||||||||||||||||||||||| ||||| |||||    
T  41803446 acctcgactgattgtacaccggcaccttcgaacccttctttttt 41803489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 537 - 667
Target Start/End: Complemental strand, 42570877 - 42570746
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| ||||  ||||||||| |||||||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  42570877 tcttcctcgtcacacaagtcaatcgggttgccctctacagtccctgaggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 42570778  T
Q  636 ggctagattgattgtacaccggcaccttcgaa 667  Q
      || || ||||||||| ||||||||||||||    
T  42570777 acctcgactgattgtacgccggcaccttcgaa 42570746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 592 - 746
Target Start/End: Original strand, 49428515 - 49428669
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatca 691  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||| ||||| ||||| | ||||||||     
T  49428515 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcg 49428614  T
Q  692 aattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
     |  |  ||| || ||| ||||||||||||||| ||||  |||||||||||||||    
T  49428615 caaacaatttcgtgccacgtcataggcgatttttctttgttcttctcatcaccct 49428669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 582 - 673
Target Start/End: Complemental strand, 14172800 - 14172709
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttc 673  Q
    |||||||| ||||||||| |||||||||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||| |||||    
T  14172800 gggcaccttcttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttc 14172709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 540 - 690
Target Start/End: Original strand, 51270926 - 51271077
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggc 638  Q
    |||| |||||| |||||||| |||||  || |  ||||||||| |||||||  |||||||| |||||||||||||||||||||||| |||||| |||  |    
T  51270926 tcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacc 51271025  T
Q  639 tagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
    | || ||| |||||||||||||||||||| ||||| ||||| | ||||||||    
T  51271026 tcgagtgaatgtacaccggcaccttcgaacccttctttttttcggaaccatc 51271077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 504 - 636
Target Start/End: Complemental strand, 14771894 - 14771761
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | |||||||||||| |||||| |||||||||||||| ||||||  | ||| |||| ||||||||||||||| ||    
T  14771894 caattagatattacaatccattacattcaatcatcttcctcgtcacacaagtcaattgggttatcctcgatattccttggggcacctgcttttggttgag 14771795  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcag 636  Q
     ||||||||| ||||||||||| |||||| ||||    
T  14771794 aaccaaaatatcatgtcctcccgctcctcctcag 14771761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 582 - 679
Target Start/End: Complemental strand, 26634248 - 26634151
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||| ||||| |||||    
T  26634248 gggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttcattttt 26634151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 537 - 747
Target Start/End: Original strand, 13974046 - 13974258
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||| ||| |||||| || |  ||||||||||| |||||  |||||||| |||| |||||||||||||||||| ||||||| |||    
T  13974046 tcttcctcgtcacacaagttaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggaacaaaatagcatgtcctccatctcctcctca 13974145  T
Q  636 ggctagattgattgtacaccggcaccttcgaatcc-ttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatct 734  Q
      || || ||||||||||||||||||||| || || ||  ||||| | ||||||||| |  |  ||||||  ||||||||| ||||||||  |||  |||    
T  13974146 acctggagtgattgtacaccggcaccttcaaaccctttttttttttcggaaccatcacaaacaattttgtgtcatgtcataagcgatttttatttgttct 13974245  T
Q  735 tctcatcaccctc 747  Q
    |||||||||||||    
T  13974246 tctcatcaccctc 13974258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 574 - 746
Target Start/End: Original strand, 36911037 - 36911212
Alignment:
Q  574 cagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatcctt 672  Q
    ||||||||||| |||||  |||||||| |||||||||||||||||||||||| |||||  |||  || || |||||||||||||||||||||||| ||||    
T  36911037 cagtccctggggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctccttctcaacctcgactgattgtacaccggcaccttcgaaccctt 36911136  T
Q  673 c--ctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
    |   ||||| | ||||||||| |  |  ||| || |||||||||| | |||||| ||||  |||||||||||||||    
T  36911137 ctttttttttcggaaccatcacaaacaatttcgtgccatgtcatatgtgatttttctttgttcttctcatcaccct 36911212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 537 - 667
Target Start/End: Complemental strand, 24363153 - 24363022
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctgg-gcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| ||||||||  ||||| || |  |||||||||| |||||| ||||||||| |||||||||||||||| ||||||| |||||| |||    
T  24363153 tcttcctcgtcacacaagtcaatcaggttgcccactacagtccctggagcaccttcttttggttgaggaccaaaatagcatatcctcccactcctcctca 24363054  T
Q  636 ggctagattgattgtacaccggcaccttcgaa 667  Q
      |  || ||||||||||||||||||||||||    
T  24363053 accccgactgattgtacaccggcaccttcgaa 24363022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 537 - 667
Target Start/End: Original strand, 26494578 - 26494709
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctgg-gcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||| | |||||||| |||||| || |  |||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||| |||    
T  26494578 tcttcctcgtcatacaagtcaatcgggttgcccgctacagtccctggagcaccttcttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 26494677  T
Q  636 ggctagattgattgtacaccggcaccttcgaa 667  Q
       | || |||||||||||| |||||||||||    
T  26494678 acttcgactgattgtacacctgcaccttcgaa 26494709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 593 - 744
Target Start/End: Complemental strand, 44336947 - 44336796
Alignment:
Q  593 tttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaa 692  Q
    ||||||| |||||||||||||||||||||||| || ||| |||  || || |||||||||||||||||||||||| ||||| ||||| | ||||||||      
T  44336947 tttggttgaggaccaaaatagcatgtcctcccgcttctcttcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgc 44336848  T
Q  693 attcggttttgtaccatgtcataggcgattttgctttcatcttctcatcacc 744  Q
    |  |  ||  || ||| ||||||||||||||| ||||  |||||||||||||    
T  44336847 aaacaattccgtgccacgtcataggcgatttttctttgttcttctcatcacc 44336796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 537 - 746
Target Start/End: Original strand, 48227631 - 48227841
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| |||||| || |  ||||||||| || ||||  |||||||| |||||||||||||||||||||| | |||||| |||    
T  48227631 tcttcctcgtcacacaaatcaatcgggttgcccgctacagtccctgcggtaccttgttttggttgaggaccaaaatagcatgtcctctcgctcctcctca 48227730  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || ||  ||||||||| ||||||||||||| ||||| ||||| | ||||||||  |  |  || ||| ||| ||||||| ||||||| ||||  ||||    
T  48227731 acctcgagcgattgtacatcggcaccttcgaacccttctttttttcggaaccatcgcaaacaattctgtgccacgtcatagacgatttttctttgttctt 48227830  T
Q  736 ctcatcaccct 746  Q
    |||||||||||    
T  48227831 ctcatcaccct 48227841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 574 - 746
Target Start/End: Complemental strand, 29761229 - 29761058
Alignment:
Q  574 cagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatcctt 672  Q
    ||||||||| |||||||  |||||||| |||||||||||||||||||||||| |||||| |||  || || |||||||||| ||||||||||||| ||||    
T  29761229 cagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtaca-cggcaccttcgaaccctt 29761131  T
Q  673 cctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
     |||||| | ||||||||  |  |  ||  || ||| ||||||||||||||| ||||  |||||||||||||||    
T  29761130 -cttttttcggaaccatcgcaaacaattccgtgccacgtcataggcgatttttctttattcttctcatcaccct 29761058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 582 - 691
Target Start/End: Complemental strand, 35525237 - 35525129
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttac 681  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||||| |||  || || ||||||||||||||||||||| || ||||  ||||| |    
T  35525237 gggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcaaaccctt-attttttc 35525139  T
Q  682 agaaccatca 691  Q
    ||||||||||    
T  35525138 agaaccatca 35525129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 537 - 672
Target Start/End: Original strand, 18974431 - 18974567
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| ||||||||| |  ||||||||||| |||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  18974431 tcttcctcgtcacacaagtcaatcgggttgtccgctacagtccctggggcaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 18974530  T
Q  636 ggctagattgattgtacaccggcaccttcgaatcctt 672  Q
      |  || || |||||||||||||| |||||| ||||    
T  18974531 accaggactgtttgtacaccggcactttcgaaccctt 18974567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 537 - 672
Target Start/End: Complemental strand, 46142541 - 46142405
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||||||  ||||| |||||||| |||||| || |  ||||||| ||| |||||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  46142541 tcttcctcatcacacaagtcaatcgggttgcccgctacagtcccaggggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 46142442  T
Q  636 ggctagattgattgtacaccggcaccttcgaatcctt 672  Q
      ||  | |||||||||||||||||||||||| ||||    
T  46142441 acctgaactgattgtacaccggcaccttcgaaccctt 46142405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 338 - 441
Target Start/End: Complemental strand, 19261775 - 19261672
Alignment:
Q  338 actttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccac 437  Q
    |||||||| ||| ||||||||||||  | |||| ||||| ||||||| |||||||||||||  ||| ||||||||| ||||||||||||||| ||||||     
T  19261775 actttattcgaatttattcaatacggaactttaatcgaatttattcagtacacgactttaattgaatttattcaatctgcgactttattcaaagtaccaa 19261676  T
Q  438 aatg 441  Q
    ||||    
T  19261675 aatg 19261672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 401 - 475
Target Start/End: Complemental strand, 31451683 - 31451609
Alignment:
Q  401 gaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatgtaccaaaatacgcacggcatat 475  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||||||||| ||||||||| ||  ||||||||    
T  31451683 gaaattattcaatacgcgactttattcaaagtaccataatgtaaaccaaaatttaccaaaatgcgtgcggcatat 31451609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 504 - 604
Target Start/End: Complemental strand, 19261624 - 19261523
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    ||||||| |||||||||  |||||| | |||||||||||| ||||| ||||||||||||||||||| || || || || ||||| |||||||||||| ||    
T  19261624 caattaggcattacaagccattacattcaatcatcttcctcgtcacctaagtcaattgggttgtccacgacaatctctggggcatctgcttttggttgag 19261525  T
Q  603 ga 604  Q
    ||    
T  19261524 ga 19261523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 292
Target Start/End: Complemental strand, 11788522 - 11788435
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattc 292  Q
    ||||||| |||||||| ||||| ||||||| ||| || ||||||||||||  ||||||||| || || |||||||||||||| |||||    
T  11788522 tttattcgaatttattcaatacacaacttttttcaaatttattcaatacgtaactttattcaaatttattcaatacgcaactttattc 11788435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 540 - 679
Target Start/End: Complemental strand, 27485805 - 27485666
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctgggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggct 639  Q
    |||| |||||| |||||||| ||||| ||| |  ||||||   |||||||  |||||||| |||||||||||||||||||||||  |||||| |||  ||    
T  27485805 tcctcgtcacacaagtcaatcgggttttccgctacagtcctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcctgctcctcctcaacct 27485706  T
Q  640 agattgattgtacaccggcaccttcgaatccttccttttt 679  Q
     || ||||||||||||   ||||||||| ||||| |||||    
T  27485705 cgagtgattgtacacctataccttcgaacccttctttttt 27485666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 38044453 - 38044394
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattatt 382  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  38044453 attattcaaaatgcgactttaattgaaattattcaaaacgcgattttaattgaaattatt 38044394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 12790512 - 12790438
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
    ||||||||| | ||||||||| | |||||||||||| ||||||||||| | |||||||||||| |||||| ||||    
T  12790512 attattcaaaacgcgactttaatcgaaattattcaaaacgcgattttaattgaaattattcaaaacacgaattta 12790438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 12790513 - 12790404
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| |||||||||||||| || ||| |||||  |||||||||||| |  ||| ||||||||| ||||||  |||| || ||    
T  12790513 aattattcaaaacgcgactttaatcgaaattattcaaaacgcgattttaattgaaattattcaaaacacgaatttattcaaagtaccaatatgtcaagca 12790414  T
Q  449 aaatgtacca 458  Q
    || |||||||    
T  12790413 aattgtacca 12790404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 35185949 - 35186058
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    ||||||||||  ||||| |||| |||||||||||| | |  ||| |||||  |||||||||||| |||||| ||||||||| ||||||  |||| || ||    
T  35185949 aattattcaaatcgcgaatttaatcgaaattattccaaatgcgattttaattgaaattattcaaaatgcgaatttattcaaagtaccaatatgtcaagca 35186048  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  35186049 aaatgtacca 35186058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 11788527 - 11788435
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattc 319  Q
    ||||||||||||||| ||||||||||| | ||||| ||| || || ||||||||| |||| ||||| |  ||||||||||| ||||| |||||    
T  11788527 gcaactttattcgaatttattcaatacacaacttttttcaaatttattcaatacgtaactttattcaaatttattcaatacgcaactttattc 11788435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 664
Target Start/End: Complemental strand, 13634505 - 13634377
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| || ||| |||    
T  13634505 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctactcctca 13634406  T
Q  636 ggctagattgattgtacaccggcaccttc 664  Q
      || || ||||||||||| |||||||||    
T  13634405 acctcgagtgattgtacactggcaccttc 13634377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 16081728 - 16081820
Alignment:
Q  46 gaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| |||| |||| ||||||||||||||||||||||||| |||||| | || ||| |||||| || | || |||||||| | ||||||||||    
T  16081728 gaatggaacaataacacttccgggtgaatgcttgagagttgttgtttcgcaaatttgaatttaccccattttagaggtaagataattgttgta 16081820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 592 - 667
Target Start/End: Original strand, 6436896 - 6436971
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaa 667  Q
    |||||||| |||||||||||||||||||||||| |||||| |||   | || | ||||||||||||||| ||||||    
T  6436896 ttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaatttggactaattgtacaccggcacattcgaa 6436971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 5766242 - 5766288
Alignment:
Q  195 taatgtaacttttattcaaatttatttaatacgcaactttattcgaa 241  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  5766242 taatgtaacttttattcgaatttattcaatacacaactttattcgaa 5766288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 40532644 - 40532570
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
    ||||||||| ||||| ||||| | |||||||||||| ||| ||||||| | |||||||||||| |||||| ||||    
T  40532644 attattcaaaatgcggctttaatcgaaattattcaaaacgtgattttaattgaaattattcaaaacacgaattta 40532570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 39856493 - 39856384
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||| | |||| |||||||||||||| || ||| |||||  ||||||||| || | || | ||||||||| ||||||  |||| || ||    
T  39856493 aattattcaaaacgcaactttaatcgaaattattcaaaacgcgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagca 39856394  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  39856393 aaatgtacca 39856384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 49260940 - 49260831
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| |||||||||||| | |   || |||||  |||||||||||| | |||| ||||||||| ||||||  |||| || ||    
T  49260940 aattattcaaaacgcgactttaatcgaaattattccaaatgtgattttaattgaaattattcaaaacgcgaatttattcaaagtaccaatatgtcaagca 49260841  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  49260840 aaatgtacca 49260831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 534 - 633
Target Start/End: Original strand, 13284577 - 13284677
Alignment:
Q  534 tcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcg 632  Q
    ||||||||||  ||||| || ||||| |||||| || |  |||||||| |||||| |||||||  || |||||||||||||||||||||| | |||||||    
T  13284577 tcatcttcctcatcacacaaatcaatcgggttgcccgctacagtcccttgggcacttgcttttcattgaggaccaaaatagcatgtcctctcgctcctcg 13284676  T
Q  633 t 633  Q
    |    
T  13284677 t 13284677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 18842918 - 18842989
Alignment:
Q  66 cgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||||||||||||||||| | |||||||| |||||| |||||| || | ||||| ||||| ||||||||||||    
T  18842918 cgggtgaatgcttgagagatgttgtttagcaagtttgaatttacccca-ttcaggggtaagacaattgttgta 18842989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 24363352 - 24363292
Alignment:
Q  318 tcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaat 378  Q
    |||| ||||||||||| |||| ||||   |||||||||||||||||||||||| |||||||    
T  24363352 tcgaaattattcaatacgcgagtttaaccgaaattattcaatacgcgattttaatcgaaat 24363292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 773 - 805
Target Start/End: Complemental strand, 35585770 - 35585738
Alignment:
Q  773 tgattctgagacatatctacataaacaaatcgg 805  Q
    |||||||||||||||||||||||||||||||||    
T  35585770 tgattctgagacatatctacataaacaaatcgg 35585738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 16097833 - 16097790
Alignment:
Q  65 ccgggtgaatgcttgagagtttttgtttagaaagttttaattta 108  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||    
T  16097833 ccgggtgaatgcttgagagttgttgtttagcaagtttgaattta 16097790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 818
Target Start/End: Original strand, 17373643 - 17373686
Alignment:
Q  775 attctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||||||||||||||| |||||||||| || ||||||||||||    
T  17373643 attctgagacatatctatataaacaaattggcgatcaaaaccta 17373686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 398
Target Start/End: Complemental strand, 24363350 - 24363299
Alignment:
Q  347 gaaattattcaatacgcgattttattcgaaattattcaatacacgactttaa 398  Q
    ||||||||||||||||||| ||||  |||||||||||||||| ||| |||||    
T  24363350 gaaattattcaatacgcgagtttaaccgaaattattcaatacgcgattttaa 24363299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 773 - 824
Target Start/End: Original strand, 26494799 - 26494849
Alignment:
Q  773 tgattctgagacatatctacataaacaaatcggtgatcaaaacctaaactaa 824  Q
    ||||||||||||| ||||| ||||| |||| |||||||||||||||||||||    
T  26494799 tgattctgagacacatctaaataaaaaaat-ggtgatcaaaacctaaactaa 26494849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 17373446 - 17373520
Alignment:
Q  318 tcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacga 392  Q
    |||| ||||||||| |  |||||||| | |||||||||||| |||||| |||| ||||||||| |||| ||||||    
T  17373446 tcgaaattattcaaaaaacgactttaatcgaaattattcaaaacgcgactttaatcgaaattagtcaaaacacga 17373520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 17685588 - 17685526
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaa 385  Q
    ||||||||| | ||| ||||| |||||||||||||| |||||||| || | ||||||||||||    
T  17685588 attattcaaaacgcggctttaattgaaattattcaaaacgcgattctaattgaaattattcaa 17685526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 24363358 - 24363300
Alignment:
Q  366 ttttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgacttta 424  Q
    ||||| ||||||||||||||||| ||| |||||  |||||||||||||| |||| ||||    
T  24363358 ttttaatcgaaattattcaatacgcgagtttaaccgaaattattcaatacgcgatttta 24363300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 24363357 - 24363307
Alignment:
Q  232 tttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgc 282  Q
    |||| ||||||||||||||||||||| ||||  ||||||| ||||||||||    
T  24363357 tttaatcgaaattattcaatacgcgagtttaaccgaaattattcaatacgc 24363307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 17373441 - 17373498
Alignment:
Q  367 tttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgacttta 424  Q
    |||| |||||||||||||| | ||||||||||  |||||||||||| | |||||||||    
T  17373441 tttaatcgaaattattcaaaaaacgactttaatcgaaattattcaaaacgcgacttta 17373498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 17373466 - 17373507
Alignment:
Q  230 actttattcgaaattattcaatacgcgactttattcgaaatt 271  Q
    |||||| |||||||||||||| ||||||||||| ||||||||    
T  17373466 actttaatcgaaattattcaaaacgcgactttaatcgaaatt 17373507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 17685589 - 17685480
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||  |||| | |||||||||||| || ||| | |||  |||||||||||| | |||| ||||||||| ||||||  ||||  | ||    
T  17685589 aattattcaaaacgcggctttaattgaaattattcaaaacgcgattctaattgaaattattcaaaacgcgaatttattcaaagtaccaatatgtctagca 17685490  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  17685489 aaatgtacca 17685480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 37779097 - 37779206
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| |||||| | ||||| |||| | |||||  || ||||||||| |  ||| ||||||||| ||||||  |||| || ||    
T  37779097 aattattcaaaacgcgactttaatcgaaaattttcaaaacacaattttaattgatattattcaaaacacgaatttattcaaagtaccaatatgtcaaaca 37779196  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  37779197 aaatgtacca 37779206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 38044454 - 38044345
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| | |||| |||| | |||||||||||| || ||| |||||  ||||||||| || | || | ||||||||| ||||||  |||| || ||    
T  38044454 aattattcaaaatgcgactttaattgaaattattcaaaacgcgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagca 38044355  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  38044354 aaatgtacca 38044345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 5e-71; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 504 - 824
Target Start/End: Complemental strand, 20375098 - 20374778
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggcacctgcttttggttcagg 603  Q
    ||||||| ||||| |||  |||||| | |||||||||||| ||||||||||||||| |||||| || || |||||| ||||||| ||||||||||| | |    
T  20375098 caattaggcattagaagccattacattcaatcatcttcctcgtcacataagtcaatcgggttgcccgcggcagtccttgggcacttgcttttggttgatg 20374999  T
Q  604 accaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttg 703  Q
    ||||||||||||||||||||| |||||| |||   | || ||||||||||||||||||||| |||||||| |||||||  |||||||| ||||| || ||    
T  20374998 accaaaatagcatgtcctcccgctcctcctcaacttggaatgattgtacaccggcaccttcaaatccttcttttttacgaaaccatcacattcgattatg 20374899  T
Q  704 taccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatc 803  Q
    | |||||||| ||| |||||||||||| |||| ||||||||||||||||| ||||| |||||   |   ||||| ||||||||||||||||| | ||||     
T  20374898 tgccatgtcacaggggattttgctttcttcttgtcatcaccctcctttttgttcaattgaacctgattctgattttgagacatatctacatagagaaatt 20374799  T
Q  804 ggtgatcaaaacctaaactaa 824  Q
    |||||||||||||||||||||    
T  20374798 ggtgatcaaaacctaaactaa 20374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 534 - 824
Target Start/End: Complemental strand, 27096782 - 27096491
Alignment:
Q  534 tcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcg 632  Q
    |||| ||||| |||||| ||||||||||||||||||||| ||||  ||||| ||||||||||||||| ||  |||||||||||||||||||| ||||||     
T  27096782 tcattttcctcgtcacacaagtcaattgggttgtcctcgacagtttctggggcacctgcttttggttgagagccaaaatagcatgtcctcccgctcctcc 27096683  T
Q  633 tcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcat 732  Q
    |||  ||||| |||||||||||||| ||||||||||||||| ||||||  ||||||||| ||||| ||| ||  ||||||| | | |||||||||||| |    
T  27096682 tcaacctagaatgattgtacaccggtaccttcgaatccttcatttttatggaaccatcacattcgatttcgtgtcatgtcacatgtgattttgctttctt 27096583  T
Q  733 cttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaacctaaactaa 824  Q
    ||| ||||| ||||||||||| |||||||||||   |   ||||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  27096582 cttgtcatcgccctcctttttgttcaactgaacctgattctgattctgagacatatctacatagagaaattggtgatcaaaacctaaactaa 27096491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 11378103 - 11377785
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| ||||||||||||||||||||| |||||||| |||||||||||||||| | ||    
T  11378103 caattagatattacaaaacattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctagggcacctgcttttggctgag 11378004  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| ||||||||||||||||| |||| | ||| |||||| ||  | ||      
T  11378003 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttctttttgaaagatccatcacatgtgattcc 11377904  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| ||||||||| ||||| |||| || ||||||||   ||| || ||||||| |||    || |||||||||||||||||||||||||||    
T  11377903 gtgccatgtcatcggcgatttttctttcttcttgtcgtcaccctccttcttcttgttcaactcaacgtttccctgattctgagacatatctacataaaca 11377804  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||| ||||||||||||    
T  11377803 aatcggcgatcaaaaccta 11377785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 34471183 - 34470865
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||  ||||||| | |||||| | ||||||||||||  ||||| |||||||||||||| |||||| |||||||| |||||||||||||||| | ||    
T  34471183 caattagctattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggttttcctcgacagtccctagggcacctgcttttggctgag 34471084  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| ||||||||||||||||| |||| || || |||||| ||  | |||     
T  34471083 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttctttttgacggatccatcacatgtgatttc 34470984  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    |||||||||||| || |||||| ||||| |||| || ||||||||   ||| || ||||||| |||    || | |||||||||||||||||||||||||    
T  34470983 gtaccatgtcatcggtgatttttctttcttcttgtcgtcaccctccttcttcttgttcaactcaacgtttccctaattctgagacatatctacataaaca 34470884  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||| ||||||||||||    
T  34470883 aatcggcgatcaaaaccta 34470865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 533 - 818
Target Start/End: Original strand, 49274543 - 49274832
Alignment:
Q  533 atcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctc 631  Q
    ||||||||||| || ||| ||||||||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||||||||| ||||||    
T  49274543 atcatcttcctcgtaacacaagtcaattgggttgtcctcgacagtccctgggacacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctc 49274642  T
Q  632 gtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttca 731  Q
     |||  || || ||||| |||||| ||||||||||||||||| |||| || || |||||| ||  | ||  || ||||||||| || |||||| |||||     
T  49274643 ctcaacctcgaatgattatacaccagcaccttcgaatccttctttttgacggatccatcacatgtgattccgtgccatgtcatcggtgatttttctttct 49274742  T
Q  732 tcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    |||| || ||||||||   ||| || ||||||| ||     |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  49274743 tcttgtcgtcaccctccttcttcttgttcaactcaatgtttctctgattctgagacatatctacataaacaaatcggtgatcaaaaccta 49274832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 608 - 821
Target Start/End: Original strand, 18441574 - 18441793
Alignment:
Q  608 aaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtacc 707  Q
    ||||||||||| ||||| ||||||||||| || ||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||| ||  |    
T  18441574 aaatagcatgttctcccgctcctcgtcagccttgattgattgtacatcggcaccttcgaacccttcttttttacagaaccatcacattcgatttcgtgtc 18441673  T
Q  708 atgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattc------tgagacatatctacataaacaaa 801  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||   |   ||||||      ||||||||||||||||| | |||    
T  18441674 atgtcataggcgatttttctttcttcttgtcatcaccctcctttttgttcaactgaacctgattctgattctgattttgagacatatctacatagagaaa 18441773  T
Q  802 tcggtgatcaaaacctaaac 821  Q
    | ||||||||||||||||||    
T  18441774 ttggtgatcaaaacctaaac 18441793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 608 - 821
Target Start/End: Original strand, 19486648 - 19486867
Alignment:
Q  608 aaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtacc 707  Q
    ||||||||||| ||||| ||||||||||| || ||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||| ||  |    
T  19486648 aaatagcatgttctcccgctcctcgtcagccttgattgattgtacatcggcaccttcgaacccttcttttttacagaaccatcacattcgatttcgtgtc 19486747  T
Q  708 atgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattc------tgagacatatctacataaacaaa 801  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||   |   ||||||      ||||||||||||||||| | |||    
T  19486748 atgtcataggcgatttttctttcttcttgtcatcaccctcctttttgttcaactgaacctgattctgattctgattttgagacatatctacatagagaaa 19486847  T
Q  802 tcggtgatcaaaacctaaac 821  Q
    | ||||||||||||||||||    
T  19486848 ttggtgatcaaaacctaaac 19486867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 504 - 827
Target Start/End: Complemental strand, 51012408 - 51012081
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | |||||| |||||  ||||| ||||||||||||||||||| | |||| |||||| ||||||||||||| | ||    
T  51012408 caattagatattacaacccattacattcaatcatattcctcatcacacaagtcaattgggttgtccttgacagttcctggggcacctgcttttggctgag 51012309  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| ||||||||||||  ||| |||| | ||| |||||| ||  | ||      
T  51012308 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaataattctttttgaaagatccatcacatgtgattcc 51012209  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttatt---caactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| ||||||||| ||||| |||| || ||||||||||| || ||   ||||| ||||   || ||||||||||||||||||||| |||||    
T  51012208 gtgccatgtcatcggcgatttttctttcttcttgtcgtcaccctccttcttcttgttcaactcaacatttccctgattctgagacatatctacaaaaaca 51012109  T
Q  800 aatcggtgatcaaaacctaaactaattc 827  Q
    ||| ||  ||||||||||| | ||||||    
T  51012108 aattggcaatcaaaacctacaataattc 51012081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 504 - 818
Target Start/End: Original strand, 44928555 - 44928873
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| || |||||||||||||||||| |||||||| ||| |||||||||||| | ||    
T  44928555 caattagatattacaacccattacattcaatcatcttcctcatcacacaattcaattgggttgtcctcgacagtccctggggaacctgcttttggctgag 44928654  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||  |||||||| |||| ||| |||| || || |||||  ||  | ||      
T  44928655 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacactagcaccttcaaatcattctttttgacggatccatcgcatgtgattcc 44928754  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| | ||||||| ||||| |||| || ||||||||   ||| || ||||||| |||    || |||||||||||||||||||||||||||    
T  44928755 gtgccatgtcatcgacgatttttctttcttcttgtcgtcaccctcattcttcttgttcaactcaacgtttccctgattctgagacatatctacataaaca 44928854  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||| ||||||||||||    
T  44928855 aatcggcgatcaaaaccta 44928873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 535 - 744
Target Start/End: Complemental strand, 34646312 - 34646102
Alignment:
Q  535 catcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgt 633  Q
    ||||||||| |||||| | || ||| |||||| || |  |||||||| |||||||| ||||||||| |||||||||||||||||||||||| |||||| |    
T  34646312 catcttcctcgtcacaaaggttaatcgggttgcccgctacagtccctagggcaccttcttttggttgaggaccaaaatagcatgtcctcccactcctcct 34646213  T
Q  634 caggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatc 733  Q
    ||  || ||||||||||||||||||||||||||| ||||| ||||| | ||||||||| |  |  |||||| ||||||||||||||||||| ||||  ||    
T  34646212 caacctcgattgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaattttgtgccatgtcataggcgatttttctttgttc 34646113  T
Q  734 ttctcatcacc 744  Q
    |||||||||||    
T  34646112 ttctcatcacc 34646102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 10052478 - 10052161
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | |||||||||||   ||||| ||||||||||||||||||||| || ||| |||| ||||||||||||| | ||    
T  10052478 caattagatattacaacacattacattcaatcatcttccgcatcacacaagtcaattgggttgtcctcgacaatccatggggcacctgcttttggctaag 10052379  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    ||| || ||||||||||||||| |||||| |||  || || ||||| |||||| ||||||||||||||||| |||| || || |||||| ||  | || |    
T  10052378 gac-aatatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttctttttgacggatccatcacatgtgattct 10052280  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcacc---ctcctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || |||||||||  | |||||| ||||| |||| || |||||   || ||| || ||||||| |||    ||||||||||||||||||||||||||||||    
T  10052279 gtgccatgtcatcagtgatttttctttcttcttgtcgtcacccttcttcttcttgttcaactcaacgtttccttgattctgagacatatctacataaaca 10052180  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||  ||||||||||||    
T  10052179 aatcgacgatcaaaaccta 10052161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 504 - 818
Target Start/End: Original strand, 51016383 - 51016698
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| ||||||||||||||||| ||| |||||| | |||||||||||||||| | ||    
T  51016383 caattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcttcgacagtccatggggcacctgcttttggctgag 51016482  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    ||||||||||||||||||| |   | ||| |||  || || ||||| ||||||  |||||||||||||||| |||| || || |||||| |   | ||      
T  51016483 gaccaaaatagcatgtccttctgtttctcctcaacctcgaatgattatacaccatcaccttcgaatccttctttttgacggatccatcacacgtgattcc 51016582  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaat 802  Q
    || || |||||| | ||||||| ||||| |||| |  |||||||||||||| |||| || |||    || ||||||||||||||||||||||||||||||    
T  51016583 gtgccgtgtcatcgacgatttttctttcttcttgttgtcaccctcctttttgttcacctcaacgtttccctgattctgagacatatctacataaacaaat 51016682  T
Q  803 cggtgatcaaaaccta 818  Q
    ||| ||||||||||||    
T  51016683 cggcgatcaaaaccta 51016698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 523 - 818
Target Start/End: Original strand, 14632582 - 14632880
Alignment:
Q  523 attacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcct 621  Q
    |||||| |||||||||||||   | ||| ||||||||||||| ||||||| |||||||| |||||||||||||||| | |||||||||||||||||||||    
T  14632582 attacatttaatcatcttccacat-acacaagtcaattgggtcgtcctcgacagtccctagggcacctgcttttggctgaggaccaaaatagcatgtcct 14632680  T
Q  622 ccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgat 721  Q
    ||| |||||| |||  || || ||||| |||||| ||||||||||||||||| |||| |  || |||||| ||  | ||  ||  |||||||| || |||    
T  14632681 cccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttctttttgatggatccatcacatgtgattccgtgtcatgtcatcggtgat 14632780  T
Q  722 tttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    |||  |||| |||| |||| ||||||   ||| || ||||||| |||    || ||||||||||||||||||||||||||||||| | ||||||||||||    
T  14632781 ttttatttcttcttgtcattaccctccttcttcttgttcaactcaacgtttccctgattctgagacatatctacataaacaaatcagcgatcaaaaccta 14632880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 50458372 - 50458054
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | | ||||||||||   |||| ||||||||||||||||||||| ||||||||||| ||||||||||||| | ||    
T  50458372 caattagatattacaacccattacattcattcatcttcctcaccacacaagtcaattgggttgtcctcgacagtccctggggcacctgcttttggctgag 50458273  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| ||| || |||  || || ||||| |||||| |||| |||||||||||| |||| || || |||||| ||  | ||      
T  50458272 gaccaaaatagcatgtcctcccgctcttcctcaacctcgaatgattatacaccagcactttcgaatccttctttttgacggatccatcacatgtgattcc 50458173  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| ||||||||| ||||| |||| || ||||| ||   ||| || | || || |||    || |||||||||||||||||||||||||||    
T  50458172 gtgccatgtcatcggcgatttttctttcttcttgtcgtcaccgtcattcttcttgtccacctcaacgtttccctgattctgagacatatctacataaaca 50458073  T
Q  800 aatcggtgatcaaaaccta 818  Q
    | || | ||||||||||||    
T  50458072 actcagcgatcaaaaccta 50458054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 504 - 713
Target Start/End: Complemental strand, 50341564 - 50341353
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||||||||||||  ||| || | ||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||| ||    
T  50341564 caattagacattacaagccatttcattcaatcatcttccttgtcacacaagtcaattggattgtcctcgacagtccctagggcacctgcttttggtttag 50341465  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttccttttt-acagaaccatcaaattcggttt 701  Q
    ||   ||||| |||||||| || |||||| |||| || || || ||||||||||| || ||| |||| ||  ||||| ||| |||||||| ||||| |||    
T  50341464 gatagaaataacatgtccttccgctcctcctcagcctggaatggttgtacaccggtactttcaaatcgtttttttttaacataaccatcacattcgattt 50341365  T
Q  702 tgtaccatgtca 713  Q
     || ||||||||    
T  50341364 cgtgccatgtca 50341353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 13894993 - 13894784
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||||||||||||| |||||||| |||||| || |  || ||||| ||||||||  |||| ||| |||||||||||||||||||||||| |||||| |||    
T  13894993 tcttccttgtcacacaagtcaatcgggttg-cccctacaatccctggggcaccttgtttttgttgaggaccaaaatagcatgtcctcccgctcctcctca 13894895  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||| |  |  ||| || ||| ||||||| ||||||| ||||  ||||    
T  13894894 acctcgaatgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaatttcgtgccacgtcatagacgatttttctttgttctt 13894795  T
Q  736 ctcatcaccct 746  Q
    |||||||||||    
T  13894794 ctcatcaccct 13894784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 45099558 - 45099348
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctgg-gcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |  |||||||||| ||||||  |||||||| |||||||||||| ||||||||||| ||| || |||    
T  45099558 tcttcctcgtcacaaaagtcaatcgggttgcccgctacagtccctggtgcaccttgttttggttgaggaccaaaataacatgtcctcccgctcatcctca 45099459  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||| |  |  || |||  ||||||||||| |||||| ||||  ||||    
T  45099458 acctcgactgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaattatgtgtcatgtcataggtgatttttctttgttctt 45099359  T
Q  736 ctcatcaccct 746  Q
    |||||||||||    
T  45099358 ctcatcaccct 45099348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 46413411 - 46413092
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct--gggca-cctgcttttggttc 600  Q
    |||||||| ||||||| | |||||| | ||||||||||||  ||||| |||||||||||||||||||||  |||||||  ||||| ||||||||||| |     
T  46413411 caattagatattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgatagtccctgggggcaccctgcttttggctg 46413312  T
Q  601 aggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtt 700  Q
    |||| | ||||| ||||||||||| ||||||  ||  || || ||||| |||||| ||||||||||||||||| |||| |  || |||||| ||  | ||    
T  46413311 aggatc-aaatatcatgtcctcccgctcctccgcaacctcgaatgattatacaccagcaccttcgaatccttctttttgatggatccatcacatgtgatt 46413213  T
Q  701 ttgtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaa 797  Q
      ||  ||||||||  | |||||| ||||| |||| || ||||||||   ||| || ||||||| ||     || |||||||||||||||||||| ||||    
T  46413212 ccgtgtcatgtcatcagtgatttttctttcttcttgtcgtcaccctccttcttcttgttcaactcaatgtttccctgattctgagacatatctacgtaaa 46413113  T
Q  798 caaatcggtgatcaaaaccta 818  Q
    |||||||| ||||||||||||    
T  46413112 caaatcggcgatcaaaaccta 46413092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 523 - 815
Target Start/End: Original strand, 30193649 - 30193942
Alignment:
Q  523 attacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcct 621  Q
    |||||| | ||||||||||||  ||||| ||||||||||||||||| ||| |||||| |||| |||||| |||||  | |||||||||| | |||||||     
T  30193649 attacattcaatcatcttcctcatcacacaagtcaattgggttgtcttcgacagtccatggggcacctgtttttgactgaggaccaaaacaacatgtcca 30193748  T
Q  622 ccctctcctcgtcaggctagattgattgtacaccggcaccttcgaa-tccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcga 720  Q
    ||| |||||| |||  || || ||||  |||||| ||||||| ||| |||||| |||| |  || |||||| ||  | ||| ||   ||||||| |||||    
T  30193749 cccgctcctcctcaacctcgaatgata-tacaccagcacctttgaaatccttctttttgatggatccatcacatgtgatttcgtgtaatgtcatcggcga 30193847  T
Q  721 ttttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaac 815  Q
    |||| ||||| |||| || |||||||||||||| |||| || |||    || ||||||||||||||||||||||||||||||||  |||||||||    
T  30193848 tttttctttcttcttgtcgtcaccctcctttttgttcacctcaacgtttccctgattctgagacatatctacataaacaaatcgacgatcaaaac 30193942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 537 - 746
Target Start/End: Original strand, 43570995 - 43571206
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |  ||||||||| |||||||   ||||||  |||||||||||||||||||||||| |||||| |||    
T  43570995 tcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctgaggcaccttgatttggtcgaggaccaaaatagcatgtcctcccgctcctcctca 43571094  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttc-ctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatct 734  Q
      || || |||||||||| ||||||||||||| |||||  ||||| | ||||||||| |  |  ||  || ||||||||||||||||||| ||||  |||    
T  43571095 acctcgactgattgtacatcggcaccttcgaacccttcttttttttcggaaccatcacaaacaattcagtgccatgtcataggcgatttttctttgttct 43571194  T
Q  735 tctcatcaccct 746  Q
    ||||||||||||    
T  43571195 tctcatcaccct 43571206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 540 - 746
Target Start/End: Complemental strand, 51694640 - 51694433
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggc 638  Q
    |||| |||||| ||||||||||||||  || |  ||||||||| | |||||  |||||||| |||| ||||||||||||||||||| |||||| |||  |    
T  51694640 tcctcgtcacacaagtcaattgggtttcccgctacagtccctgcgacaccttgttttggtttaggaacaaaatagcatgtcctcccgctcctcctcaacc 51694541  T
Q  639 tagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctc 738  Q
    | || |||||||||||||||||||||||| ||||| ||||| | ||||||||  |  |  || ||| ||| ||||||||||||||| ||||  | |||||    
T  51694540 tcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattatgtgccacgtcataggcgatttttctttgttattctc 51694441  T
Q  739 atcaccct 746  Q
    ||||||||    
T  51694440 atcaccct 51694433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 60 - 307
Target Start/End: Original strand, 18441215 - 18441468
Alignment:
Q  60 aacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgtaccacatatct-ctacccgaat 158  Q
    |||||||||||||||| ||||||| |  | ||||| |||||| ||||||||| | |||||||||||| |||||||||||      |  | | ||||||||    
T  18441215 aacttccgggtgaatgtttgagagctgctatttagcaagtttgaatttatcccatttcagaggtaaa-caattgttgtagttggaaggtgcaacccgaat 18441313  T
Q  159 ttaatgtaatgataggacatatttaggaacttt-----atttaatgtaacttttattcaaatttatttaatacgcaactttattcgaaa-ttattcaata 252  Q
     ||||||||||||||||||||||||||||||||     || |||| |||| ||||||| || ||||| ||| ||  ||| ||||| ||| ||||||||||    
T  18441314 gtaatgtaatgataggacatatttaggaactttatgtaatataatataacctttattcgaaattattcaatccgttactctattcaaaatttattcaata 18441413  T
Q  253 cgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatac 307  Q
    |||||||||| |||||||| |||||||||  ||| || |||  ||||||||||||    
T  18441414 cgcgactttaatcgaaattattcaatacgtgactttaatcgtaattattcaatac 18441468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 60 - 307
Target Start/End: Original strand, 19486289 - 19486542
Alignment:
Q  60 aacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgtaccacatatct-ctacccgaat 158  Q
    |||||||||||||||| ||||||| |  | ||||| |||||| ||||||||| | |||||||||||| |||||||||||      |  | | ||||||||    
T  19486289 aacttccgggtgaatgtttgagagctgctatttagcaagtttgaatttatcccatttcagaggtaaa-caattgttgtagttggaaggtgcaacccgaat 19486387  T
Q  159 ttaatgtaatgataggacatatttaggaacttt-----atttaatgtaacttttattcaaatttatttaatacgcaactttattcgaaa-ttattcaata 252  Q
     ||||||||||||||||||||||||||||||||     || |||| |||| ||||||| || ||||| ||| ||  ||| ||||| ||| ||||||||||    
T  19486388 gtaatgtaatgataggacatatttaggaactttatgtaatataatataacctttattcgaaattattcaatccgttactctattcaaaatttattcaata 19486487  T
Q  253 cgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatac 307  Q
    |||||||||| |||||||| |||||||||  ||| || |||  ||||||||||||    
T  19486488 cgcgactttaatcgaaattattcaatacgtgactttaatcgtaattattcaatac 19486542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 534 - 746
Target Start/End: Complemental strand, 55206033 - 55205821
Alignment:
Q  534 tcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcg 632  Q
    |||||||||| |||||| ||||||||  ||||| || |  ||||||||||| |||||  |||||||| |||||| ||||||||||||||||| ||||||     
T  55206033 tcatcttcctcgtcacacaagtcaatcaggttgcccactacagtccctggggcaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcc 55205934  T
Q  633 tcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcat 732  Q
    |||  || || |||||||||| ||||| ||||||| | ||| ||||||  ||||||||| |  |  |||||| ||| |||||||| |||||| ||||  |    
T  55205933 tcaacctcgaatgattgtacatcggca-cttcgaacctttcttttttatggaaccatcacaaacaattttgtgccacgtcataggtgatttttctttgtt 55205835  T
Q  733 cttctcatcaccct 746  Q
    ||||||||||||||    
T  55205834 cttctcatcaccct 55205821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 540 - 746
Target Start/End: Original strand, 43478143 - 43478350
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggc 638  Q
    |||| |||||| |||||||| |||||  || |  ||||||||| ||||||   |||||||| |||||||||||||||||||||||| |||||| |||  |    
T  43478143 tcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccctgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacc 43478242  T
Q  639 tagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctc 738  Q
    | || ||||||||||| | |||||||||| ||||| ||||| | ||||||||  |  |  ||| || ||| ||||||||||||||| ||||  |||||||    
T  43478243 tcgagtgattgtacacagacaccttcgaacccttctttttttcggaaccatcgcaaacaatttcgtgccacgtcataggcgatttttctttgttcttctc 43478342  T
Q  739 atcaccct 746  Q
    ||||||||    
T  43478343 atcaccct 43478350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 49139261 - 49139107
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  49139261 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 49139162  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  49139161 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 49139107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 52568528 - 52568319
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||||||||||||| |||||||| | |||| || |  ||||||||||| |||||  |||||||| | || ||||||||||||| ||||| |||||| |||    
T  52568528 tcttccttgtcacacaagtcaatcgtgttgcccactacagtccctggggcaccttgttttggttgatgatcaaaatagcatgtgctcccgctcctcctca 52568429  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || |||||||||||||||||||||||| ||||| ||||| | |||| |||| |  |  ||| || ||| ||||||| ||||||| ||||  ||||    
T  52568428 acctcgagtgattgtacaccggcaccttcgaacccttctttttt-ctgaactatcacaaacaatttcgtgccacgtcatagacgatttttctttgttctt 52568330  T
Q  736 ctcatcaccct 746  Q
    |||||||||||    
T  52568329 ctcatcaccct 52568319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 54391454 - 54391608
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  54391454 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 54391553  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  54391554 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 54391608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 582 - 746
Target Start/End: Original strand, 7247218 - 7247383
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttc-cttttta 680  Q
    ||||||||  |||||||| |||||||||||||||||||||| | |||||| |||  || || ||||||||||||| |||||||||| |||||  |||||     
T  7247218 gggcaccttgttttggttgaggaccaaaatagcatgtcctctcgctcctcctcaacctggactgattgtacaccgacaccttcgaacccttctttttttt 7247317  T
Q  681 cagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
    | ||||||||  |  |  ||||||  |||||||||||||||||| ||||  |||||||||||||||    
T  7247318 cggaaccatctcaaacaattttgtgtcatgtcataggcgatttttctttgttcttctcatcaccct 7247383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 374 - 459
Target Start/End: Complemental strand, 50341693 - 50341608
Alignment:
Q  374 gaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatgtaccaa 459  Q
    |||||||||||||||||||||||||  ||| ||||||| || || ||||||||||| |||||| ||||||||||||||||||||||    
T  50341693 gaaattattcaatacacgactttaatcgaatttattcagtacgcaactttattcaaagtaccagaatgtaaaccaaaatgtaccaa 50341608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 537 - 679
Target Start/End: Original strand, 2429597 - 2429740
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |   |||||||||| |||||  |||||||| ||||||||||||||||||| |||| |||||  |||    
T  2429597 tcttcctcgtcacacaagtcaatcgggttgcccgctatagtccctggggcaccttgttttggttgaggaccaaaatagcatgtcttcccgctcctgctca 2429696  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
      || || |||||||||||||||||||||||| ||||| |||||    
T  2429697 acctcgagtgattgtacaccggcaccttcgaacccttctttttt 2429740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 644 - 818
Target Start/End: Complemental strand, 42322389 - 42322212
Alignment:
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcac 743  Q
    ||||| |||||| ||||||||||||||||| |||| || || |||||| ||  | ||| || ||||||||| ||||||||| ||||| |||| ||  |||    
T  42322389 tgattatacaccagcaccttcgaatccttctttttaacggatccatcacatgtgatttcgtgccatgtcatcggcgatttttctttcttcttgtcgccac 42322290  T
Q  744 cctccttt---ttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
     |||||||   || ||||||| |||    || |||||||||||||||||||||||||||||| || ||||||||||||    
T  42322289 actcctttctgttgttcaactcaacgtttccctgattctgagacatatctacataaacaaattggcgatcaaaaccta 42322212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 537 - 663
Target Start/End: Complemental strand, 55268168 - 55268041
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |   |||||||||| |||||  ||||||||||||||| ||||||||||||||||| |||||| |||    
T  55268168 tcttcctcgtcacacaagtcaatcgggttgcccactagagtccctggggcaccttgttttggttcaggaccgaaatagcatgtcctcccgctcctcctca 55268069  T
Q  636 ggctagattgattgtacaccggcacctt 663  Q
      || || ||||||||||||||||||||    
T  55268068 acctcgagtgattgtacaccggcacctt 55268041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 2646083 - 2645929
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  2646083 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 2645984  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || ||||||||||| |||||||||||| ||||| ||||| | ||||||||    
T  2645983 accttgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatc 2645929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 34050739 - 34050893
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||| ||||||||||| |||||| |||    
T  34050739 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgtggtaccttgttttggttgaggaccgaaataacatgtcctcccgctcctcctca 34050838  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  34050839 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 34050893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 46406017 - 46406171
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  46406017 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 46406116  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||| ||||||||||||| ||||| ||||| | ||||||||    
T  46406117 acctcgagtgattgtacatcggcaccttcgaacccttctttttttcggaaccatc 46406171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 592 - 679
Target Start/End: Original strand, 36136082 - 36136169
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||| ||||| |||||    
T  36136082 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttt 36136169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 3494231 - 3494077
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| ||||||||| |||||||| |||||| |   |||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| | |    
T  3494231 tcttcctcgtcacataaatcaattggcttgtccgctatagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctga 3494132  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      ||  | |||||||| ||||||||||||||| ||||| ||||| | ||||||||    
T  3494131 acctccagtgattgtaaaccggcaccttcgaacccttctttttttcggaaccatc 3494077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 582 - 746
Target Start/End: Complemental strand, 46345648 - 46345483
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttc-cttttta 680  Q
    ||||||||  |||| ||| |||||| ||||||||||||||||| || ||| |||  || || |||||||||||||||||||||| | | |||  |||||     
T  46345648 gggcaccttgtttttgttgaggaccgaaatagcatgtcctcccgctgctcctcaacctggactgattgtacaccggcaccttcggaccattctttttttt 46345549  T
Q  681 cagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
    | ||||||||| |  |  ||| || ||||||||||||||||||| ||||  |||||||||||||||    
T  46345548 cggaaccatcacaaacaatttcgtgccatgtcataggcgatttttctttgttcttctcatcaccct 46345483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 574 - 690
Target Start/End: Complemental strand, 49217799 - 49217682
Alignment:
Q  574 cagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatcctt 672  Q
    ||||||||| |||||||  |||||||| ||||||||||||||||||| |||| |||||| |||  || || |||||||||||| |||||||||||  |||    
T  49217799 cagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcttcccgctcctcctcaacctcgagtgattgtacacccgcaccttcgaactctt 49217700  T
Q  673 cctttttacagaaccatc 690  Q
    | ||||| | ||||||||    
T  49217699 ctttttttcggaaccatc 49217682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 825
Target Start/End: Original strand, 27188352 - 27188440
Alignment:
Q  737 tcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaacctaaactaat 825  Q
    ||||||||||||||||| ||||||| |||    ||||||||||||||||||||||||||||||||| ||   ||||||| |||||||||    
T  27188352 tcatcaccctcctttttgttcaactcaacgtttccttgattctgagacatatctacataaacaaattggcagtcaaaacttaaactaat 27188440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 583 - 667
Target Start/End: Complemental strand, 34692344 - 34692260
Alignment:
Q  583 ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaa 667  Q
    |||||||  |||||||| ||||||||| |||||||||||||| |||||| |||  || || ||||||||||||||||||||||||    
T  34692344 ggcaccttgttttggttgaggaccaaagtagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 34692260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 592 - 679
Target Start/End: Complemental strand, 4003305 - 4003218
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
    |||||||| |||||| |||||||||||||| || |||||| |||  || || |||||||||||||||||||||||| ||||| |||||    
T  4003305 ttttggttgaggaccgaaatagcatgtccttccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttt 4003218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 592 - 690
Target Start/End: Complemental strand, 2267636 - 2267538
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||  || || ||||||||||||| |||||||||| ||||  ||||| | ||||||||    
T  2267636 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccgacaccttcgaacccttatttttttcggaaccatc 2267538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 582 - 664
Target Start/End: Original strand, 41579084 - 41579166
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttc 664  Q
    ||||||||  |||||||| ||||||||||||||||||| |||| |||||| |||  || || |||||||||||||||||||||    
T  41579084 gggcaccttgttttggttgaggaccaaaatagcatgtcttcccgctcctcctcaacctggactgattgtacaccggcaccttc 41579166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 574 - 663
Target Start/End: Original strand, 49611304 - 49611394
Alignment:
Q  574 cagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcacctt 663  Q
    ||||||||| |||||||  |||||||| |||||||||||||||||||||||| |||||| |||  || || |||||||||||||| |||||    
T  49611304 cagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggtacctt 49611394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 18441400 - 18441469
Alignment:
Q  212 aaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacg 281  Q
    ||||||||| ||||||| |||||| |||||||||||||||||| ||||||| ||| |||| |||||||||    
T  18441400 aaatttattcaatacgcgactttaatcgaaattattcaatacgtgactttaatcgtaattattcaatacg 18441469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 19486474 - 19486543
Alignment:
Q  212 aaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacg 281  Q
    ||||||||| ||||||| |||||| |||||||||||||||||| ||||||| ||| |||| |||||||||    
T  19486474 aaatttattcaatacgcgactttaatcgaaattattcaatacgtgactttaatcgtaattattcaatacg 19486543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 6754963 - 6755009
Alignment:
Q  195 taatgtaacttttattcaaatttatttaatacgcaactttattcgaa 241  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  6754963 taatgtaacttttattcgaatttattcaatacgcaactttattcgaa 6755009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 15637564 - 15637622
Alignment:
Q  195 taatgtaacttttattcaaatttatttaatacgcaactttattcgaaattattcaatac 253  Q
    ||||||||||||||||| |||||||| ||||| |||||||||| ||| |||||||||||    
T  15637564 taatgtaacttttattcgaatttattcaatacacaactttatttgaatttattcaatac 15637622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 530 - 618
Target Start/End: Original strand, 17371773 - 17371862
Alignment:
Q  530 ttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgt 618  Q
    |||||||||| |||  |||| |||||||||||||||||||||| |||| ||| | |||||| |||||||||  ||||||||||| |||||    
T  17371773 ttaatcatctccctcatcacttaagtcaattgggttgtcctcgacagttcctagagcacctacttttggttgtggaccaaaataacatgt 17371862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 44928428 - 44928537
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| |||||||||||||| || ||| |||||  ||||||||| || | || | ||||||||| ||||||  |||| || ||    
T  44928428 aattattcaaaacgcgactttaatcgaaattattcaaaacgcgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagca 44928527  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  44928528 aaatgtacca 44928537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 18441404 - 18441468
Alignment:
Q  324 ttattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatac 388  Q
    |||||||||| ||||||||| | |||||||||||||||| || |||| ||| |||||||||||||    
T  18441404 ttattcaatacgcgactttaatcgaaattattcaatacgtgactttaatcgtaattattcaatac 18441468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 19486478 - 19486542
Alignment:
Q  324 ttattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatac 388  Q
    |||||||||| ||||||||| | |||||||||||||||| || |||| ||| |||||||||||||    
T  19486478 ttattcaatacgcgactttaatcgaaattattcaatacgtgactttaatcgtaattattcaatac 19486542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 351 - 414
Target Start/End: Original strand, 18441404 - 18441467
Alignment:
Q  351 ttattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaata 414  Q
    ||||||||||||||| |||| |||||||||||||||||  ||||||||  | ||||||||||||    
T  18441404 ttattcaatacgcgactttaatcgaaattattcaatacgtgactttaatcgtaattattcaata 18441467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 351 - 414
Target Start/End: Original strand, 19486478 - 19486541
Alignment:
Q  351 ttattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaata 414  Q
    ||||||||||||||| |||| |||||||||||||||||  ||||||||  | ||||||||||||    
T  19486478 ttattcaatacgcgactttaatcgaaattattcaatacgtgactttaatcgtaattattcaata 19486541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 535 - 673
Target Start/End: Original strand, 27188199 - 27188338
Alignment:
Q  535 catcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgt 633  Q
    |||||||||  ||||| |||||||| ||| || |  || ||||||||||| ||  |||||||  || |||| ||||||||||||||||||| |||||| |    
T  27188199 catcttcctcatcacacaagtcaatcgggatgcctgcgacagtccctgggacatttgcttttaattgaggagcaaaatagcatgtcctcccgctcctcct 27188298  T
Q  634 caggctagattgattgtacaccggcaccttcgaatccttc 673  Q
    ||  || || ||||||||||||   |||||||||||||||    
T  27188299 caacctcgactgattgtacaccaaaaccttcgaatccttc 27188338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 20375527 - 20375485
Alignment:
Q  160 taatgtaatgataggacatatttaggaactttatttaatgtaa 202  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  20375527 taatgtaatgatatgacatatttaggaactttatgtaatgtaa 20375485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 30193520 - 30193602
Alignment:
Q  376 aattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatgtacca 458  Q
    |||||||||| || |||||||||  |||||||||| | |||||| ||||||||| ||||||  |||| || ||||||||||||    
T  30193520 aattattcaaaacgcgactttaatcgaaattattccaaatgcgaatttattcaaagtaccaatatgtcaagcaaaatgtacca 30193602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 292
Target Start/End: Complemental strand, 50341718 - 50341640
Alignment:
Q  214 atttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattc 292  Q
    ||||||| |||||  ||||||| | ||||||||||||||| |||||||| ||||| || |||| ||||||||| |||||    
T  50341718 atttattcaatacagaactttaattgaaattattcaatacacgactttaatcgaatttattcagtacgcaactttattc 50341640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 773 - 818
Target Start/End: Complemental strand, 47759801 - 47759756
Alignment:
Q  773 tgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||    
T  47759801 tgattttgagacatatctacttaaacaaatcggcgatcaaaaccta 47759756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 51012537 - 51012428
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| || ||||||||||| || ||| |||||  ||||||||| || | || | ||||||||| ||||||  |||| || ||    
T  51012537 aattattcaaaacgcgactttaatcaaaattattcaaaacgcgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagca 51012438  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  51012437 aaatgtacca 51012428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 25887372 - 25887280
Alignment:
Q  46 gaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| |||| ||| |||||||||||||||| ||||||||| | |||||| |||||| |||||| |  | |||| |||||| | ||||||||||    
T  25887372 gaatggaacaatagaacttccgggtgaatgtttgagagttgtcgtttagcaagtttgaatttacctcatttcaaaggtaagataattgttgta 25887280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 43688587 - 43688635
Alignment:
Q  405 ttattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatg 453  Q
    ||||||||||||| ||||||||||| |||||| |||||| |||||||||    
T  43688587 ttattcaatatgcaactttattcaaagtaccaaaatgtataccaaaatg 43688635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 458
Target Start/End: Complemental strand, 11378232 - 11378121
Alignment:
Q  347 gaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaac 446  Q
    |||||||||||| |||| | |||| |||||||||||||| || ||| |||||  ||||||||| || | |  | ||||||||| ||||||  |||| ||     
T  11378232 gaaattattcaaaacgcaactttaatcgaaattattcaaaacgcgattttaattgaaattatttaaaacgaaaatttattcaaagtaccaatatgtcaag 11378133  T
Q  447 caaaatgtacca 458  Q
    ||||||||||||    
T  11378132 caaaatgtacca 11378121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 18441364 - 18441475
Alignment:
Q  258 ctttattcgaaattgttcaatacgcaactatattcgatatt-attcaatacacaactatattcgatattattcaatatgcgactttatttgaaattattc 356  Q
    |||||||||||||| |||||| ||  ||| ||||| | ||| ||||||||| | ||| || |||| ||||||||||| | ||||||| | | ||||||||    
T  18441364 ctttattcgaaattattcaatccgttactctattcaaaatttattcaatacgcgactttaatcgaaattattcaatacgtgactttaatcgtaattattc 18441463  T
Q  357 aatacgcgattt 368  Q
    |||||| |||||    
T  18441464 aatacgtgattt 18441475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 19486438 - 19486549
Alignment:
Q  258 ctttattcgaaattgttcaatacgcaactatattcgatatt-attcaatacacaactatattcgatattattcaatatgcgactttatttgaaattattc 356  Q
    |||||||||||||| |||||| ||  ||| ||||| | ||| ||||||||| | ||| || |||| ||||||||||| | ||||||| | | ||||||||    
T  19486438 ctttattcgaaattattcaatccgttactctattcaaaatttattcaatacgcgactttaatcgaaattattcaatacgtgactttaatcgtaattattc 19486537  T
Q  357 aatacgcgattt 368  Q
    |||||| |||||    
T  19486538 aatacgtgattt 19486549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 44928429 - 44928488
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattatt 382  Q
    ||||||||| | ||||||||| | |||||||||||| ||||||||||| | |||||||||    
T  44928429 attattcaaaacgcgactttaatcgaaattattcaaaacgcgattttaattgaaattatt 44928488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 7955339 - 7955377
Alignment:
Q  200 taacttttattcaaatttatttaatacgcaactttattc 238  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  7955339 taacttttattcgaatttattcaatacgcaactttattc 7955377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 8629549 - 8629503
Alignment:
Q  195 taatgtaacttttattcaaatttatttaatacgcaactttattcgaa 241  Q
    ||||||||||||||||| |||||||| |||||  |||||||||||||    
T  8629549 taatgtaacttttattcgaatttattcaatacataactttattcgaa 8629503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 339 - 424
Target Start/End: Original strand, 18441364 - 18441450
Alignment:
Q  339 ctttatttgaaattattcaatacgcgattttattcgaaatt-attcaatacacgactttaaaggaaattattcaatatgcgacttta 424  Q
    ||||||| ||||||||||||| ||  | | ||||| ||||| ||||||||| |||||||||  |||||||||||||| | |||||||    
T  18441364 ctttattcgaaattattcaatccgttactctattcaaaatttattcaatacgcgactttaatcgaaattattcaatacgtgacttta 18441450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 339 - 424
Target Start/End: Original strand, 19486438 - 19486524
Alignment:
Q  339 ctttatttgaaattattcaatacgcgattttattcgaaatt-attcaatacacgactttaaaggaaattattcaatatgcgacttta 424  Q
    ||||||| ||||||||||||| ||  | | ||||| ||||| ||||||||| |||||||||  |||||||||||||| | |||||||    
T  19486438 ctttattcgaaattattcaatccgttactctattcaaaatttattcaatacgcgactttaatcgaaattattcaatacgtgacttta 19486524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 43478005 - 43478083
Alignment:
Q  376 aattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatgt 454  Q
    ||||||| || ||||||||||||  |||||||||  | |||||||||||||| | |||||| ||||| || ||||||||    
T  43478005 aattattaaaaacacgactttaatcgaaattatttcaaatgcgactttattctaagtaccataatgtcaaacaaaatgt 43478083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 349 - 455
Target Start/End: Original strand, 51016244 - 51016350
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| || ||||||||||| ||  || |||||  |||||||||||| |  ||| ||||||||| ||||||  |||| || ||    
T  51016244 aattattcaaaacgcgactttaatcaaaattattcaaaacgtgattttaattgaaattattcaaaacacgaatttattcaaagtaccaatatgtcaagca 51016343  T
Q  449 aaatgta 455  Q
    |||||||    
T  51016344 aaatgta 51016350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 51016245 - 51016319
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
    ||||||||| | ||||||||| |  ||||||||||| ||| ||||||| | |||||||||||| |||||| ||||    
T  51016245 attattcaaaacgcgactttaatcaaaattattcaaaacgtgattttaattgaaattattcaaaacacgaattta 51016319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 769 - 819
Target Start/End: Complemental strand, 55205813 - 55205763
Alignment:
Q  769 accttgattctgagacatatctacataaacaaatcggtgatcaaaacctaa 819  Q
    |||||||||||||||||||||||||| || |||  || |||||||||||||    
T  55205813 accttgattctgagacatatctacattaaaaaaatggcgatcaaaacctaa 55205763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 6464064 - 6464015
Alignment:
Q  89 gtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    ||||||||||||| |||||| || | ||||||||||| ||||||||||||    
T  6464064 gtttagaaagtttgaatttaccccatttcagaggtaagacaattgttgta 6464015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 25887230 - 25887197
Alignment:
Q  175 acatatttaggaactttatttaatgtaactttta 208  Q
    ||||||||||||||||||| ||||||||||||||    
T  25887230 acatatttaggaactttatgtaatgtaactttta 25887197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 1e-68; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 523 - 818
Target Start/End: Original strand, 6977938 - 6978234
Alignment:
Q  523 attacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcct 621  Q
    |||||||| ||||||||||||  ||||| || |||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||    
T  6977938 attacactcaatcatcttcctcatcacacaaatcaattgggttgtcctcgacagtcccttgggcacctgcttttggttgaggaccaaaatagcatgtcct 6978037  T
Q  622 ccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgat 721  Q
    ||| |||||| |||  || || ||||| |||||| |||||||||||| |||| |||| || || |||||| ||  | ||  || ||||||||| ||| ||    
T  6978038 cccgctcctcctcaacctcgaatgattatacaccagcaccttcgaattcttctttttgacggatccatcacatgtgattccgtgccatgtcatcggcaat 6978137  T
Q  722 tttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||| ||||| |||| || |||||||||||||||||||||| |||    || ||||||||||||||||||||||||||||||||||||||||||||||    
T  6978138 ttttctttcttcttgtcgtcaccctcctttttattcaactcaacgtttccctgattctgagacatatctacataaacaaatcggtgatcaaaaccta 6978234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 504 - 766
Target Start/End: Complemental strand, 15891093 - 15890832
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||| |||||||||   |||||| | ||||||||||||  ||||| ||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||    
T  15891093 caattaaacattacaaaccattacattcaatcatcttcctcatcacacaagtcaattgggttgtc-tcgacagtccctggggcacctgcttttggttgag 15890995  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    ||||||||||||||||||| || |||||| |||  ||| | ||||||||||||  |||||||||||||||  ||||||| ||||||||| ||||| ||      
T  15890994 gaccaaaatagcatgtccttccgctcctcctcaacctaaaatgattgtacaccaacaccttcgaatccttt-tttttacggaaccatcacattcgattcc 15890896  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaaca 766  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  15890895 gtaccatgtcatagacgattttgctttcttcttctcatcaccctcctttttgttcaactgaaca 15890832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 51 - 265
Target Start/End: Complemental strand, 15891362 - 15891143
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgtaccacatatctct 150  Q
    |||| |||||||||||||||||||||||||||| | |||||||| | |||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  15891362 gaacaataaaacttccgggtgaatgcttgagagctgttgtttagcaggtttaaatttattcaatttcagaggtaagacaattgttgtaccacatatctct 15891263  T
Q  151 acccgaatttaatgtaatgataggacatatttaggaactttatttaatgta-----acttttattcaaatttatttaatacgcaactttattcgaaatta 245  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||||     ||||||| || || ||||| ||||||| |||||| || ||||||    
T  15891262 acccgaatgtaatgtaatgatatgacatatttaggaactttatgtaatgtaatgttacttttaatcgaaattattcaatacgcgactttaatcaaaatta 15891163  T
Q  246 ttcaatacgcgactttattc 265  Q
    ||||||||||||||||||||    
T  15891162 ttcaatacgcgactttattc 15891143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 535 - 831
Target Start/End: Original strand, 33404869 - 33405166
Alignment:
Q  535 catcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgt 633  Q
    |||||||||  ||||| |||||||| |||||| ||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||| || |||||| |    
T  33404869 catcttcctcctcacacaagtcaatcgggttgccctcgacagtccctggggcacctacttttggttgaggaccaaaatagcatgtcctaccgctcctcct 33404968  T
Q  634 caggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatc 733  Q
    ||  || || |||||||||||| ||||||| ||||||||| ||||||| ||||||||| ||  | ||   | |||||||||||| || ||| ||||| ||    
T  33404969 caacctcgactgattgtacaccagcacctttgaatccttcttttttacggaaccatcacatgtgattccttgccatgtcataggtgacttttctttcttc 33405068  T
Q  734 ttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaacctaaactaattctaac 831  Q
    || ||||||||||||||||| ||||||| ||     |  |||||||||||||||| ||||||||||||| || |||||||||||||||||||| ||||    
T  33405069 ttgtcatcaccctcctttttgttcaactcaatgtttctctgattctgagacatatatacataaacaaattggcgatcaaaacctaaactaattgtaac 33405166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 24107891 - 24107576
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||| ||||| ||||||||||||||||||||  |||||| | || ||||||||||||| | ||    
T  24107891 caattagatattacaacccattacattcaatcatcttccttctcacacaagtcaattgggttgtcctcaacagtccataggacacctgcttttggctgag 24107792  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||| ||||| | |||||| |||  || || ||||| ||||||  ||| |||||||||||| |||| || || |||||| ||  | |||     
T  24107791 gaccaaaatagcatttcctctcgctcctcctcaacctcgaatgattatacaccaacacattcgaatccttctttttgacggatccatcacatgtgatttc 24107692  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaat 802  Q
    || ||||||||| ||||||||| ||||| |||| || |||||||||||||| |||| || |||    || ||||||||||||||||||||||||||||||    
T  24107691 gtgccatgtcatcggcgatttttctttcttcttgtcgtcaccctcctttttgttcacctcaacgtttccctgattctgagacatatctacataaacaaat 24107592  T
Q  803 cggtgatcaaaaccta 818  Q
     || ||||||||||||    
T  24107591 tggcgatcaaaaccta 24107576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 523 - 737
Target Start/End: Complemental strand, 16413376 - 16413162
Alignment:
Q  523 attacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgg-gcacctgcttttggttcaggaccaaaatagcatgtcct 621  Q
    |||||| | |||||||||||| |||||| |||||||| ||||||||||||||||||||||  |||||||||||||||| || ||||||||| |||||| |    
T  16413376 attacattcaatcatcttcctcgtcacacaagtcaatcgggttgtcctcgccagtccctgcagcacctgcttttggttgag-accaaaataacatgtctt 16413278  T
Q  622 ccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgat 721  Q
    ||| |||||| |||  || || ||||||||||| | |||||||||||||||| ||||||| ||||||||| ||||| ||  ||  |||||||||||||||    
T  16413277 cccgctcctcctcaacctcgaatgattgtacactgacaccttcgaatccttcttttttacggaaccatcacattcgattccgtgtcatgtcataggcgat 16413178  T
Q  722 tttgctttcatcttct 737  Q
    ||| ||||| ||||||    
T  16413177 ttttctttcttcttct 16413162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 505 - 816
Target Start/End: Complemental strand, 34520837 - 34520522
Alignment:
Q  505 aattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcagg 603  Q
    ||||||| ||||||| | |||||| | ||||||||||||  ||||| |||||||||||| |||||||| | |||||| |||||||||||||||| | | |    
T  34520837 aattagatattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggatgtcctcgacggtccctcgggcacctgcttttggctgaag 34520738  T
Q  604 accaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttg 703  Q
    ||||||||||||||||||||| |||||| |||  || || ||||| ||||||  |||||||||||||||| |||| || || |||||| ||  | ||| |    
T  34520737 accaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccaacaccttcgaatccttctttttgacggatccatcacatgtgatttcg 34520638  T
Q  704 taccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaacaa 800  Q
    |  |||||||| ||||||||| ||||| |||| || ||||||||   ||| || |||| || |||    || ||||| ||||||||||||||||||||||    
T  34520637 tgtcatgtcatcggcgatttttctttcttcttgtcgtcaccctccttcttcttgttcacctcaacgtttccctgattttgagacatatctacataaacaa 34520538  T
Q  801 atcggtgatcaaaacc 816  Q
     |||| ||||||||||    
T  34520537 ctcggcgatcaaaacc 34520522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 523 - 817
Target Start/End: Complemental strand, 17538012 - 17537714
Alignment:
Q  523 attacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcct 621  Q
    |||||| | ||||||||||||  ||||| ||||||||||||||||||||| |||||  |||| |||||| |||||| | |||||||||||||||||||||    
T  17538012 attacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtctatgggacacctgtttttggctgaggaccaaaatagcatgtcct 17537913  T
Q  622 ccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgat 721  Q
    ||| |||||| |||  || || ||||| |||||| |||||||| | |||||| |||| || || |||||| ||  | |||||| ||||||||| || |||    
T  17537912 cccgctcctcctcaacctcgaatgattatacaccagcaccttcaagtccttctttttgacggatccatcacatgtgattttgtgccatgtcatcggtgat 17537813  T
Q  722 tttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaacct 817  Q
    ||| ||||| |||| || || |||||   ||| || ||||||| |||    |||||||||||| ||||||||||||||| ||||||  |||||||||||    
T  17537812 ttttctttcttcttgtcgtcgccctccttcttcttgttcaactcaacgttcccttgattctgatacatatctacataaataaatcgacgatcaaaacct 17537714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 537 - 746
Target Start/End: Original strand, 43492575 - 43492785
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||||||    ||||| ||||| |||||  |||||||| |||||||||||||||||||||||| ||||||||||    
T  43492575 tcttcctcgtcacacaagtcaatcgggttgtccgttacagtcactggggcaccttgttttggttgaggaccaaaatagcatgtcctcccactcctcgtca 43492674  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||| |  |  || ||| ||||||||||||||||||| ||||  ||||    
T  43492675 acctggactgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaattatgtgccatgtcataggcgatttttctttgttctt 43492774  T
Q  736 ctcatcaccct 746  Q
    ||| |||||||    
T  43492775 ctcttcaccct 43492785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 537 - 744
Target Start/End: Complemental strand, 41498207 - 41497999
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||| ||||||||| |||||||| |||||| || |  ||||||||||| |||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  41498207 tcttacttgtcacacaagtcaatcgggttggccgctacagtccctggggcaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 41498108  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || |||||||||||||||||||||||| | ||| ||||| | ||||||||| |  |  || ||| ||||||||||||||||||| ||||  ||||    
T  41498107 acctggactgattgtacaccggcaccttcgaacctttcattttttcggaaccatcacaaacaattatgtgccatgtcataggcgatttttctttgttctt 41498008  T
Q  736 ctcatcacc 744  Q
    |||||||||    
T  41498007 ctcatcacc 41497999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 537 - 746
Target Start/End: Original strand, 16582925 - 16583137
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| ||||  |||||||| ||||||||  |||| ||| |||||||||||||||||||||||| |||||| |||    
T  16582925 tcttcctcgtcacacaagtcaatcgggttgccctctacagtccctagggcaccttgtttttgttgaggaccaaaatagcatgtcctcccgctcctcctca 16583024  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttc--ctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatc 733  Q
      || || |||||||||||||||||||||||| |||||   ||||| | ||||||||| |  |  |||||| ||| ||||||| ||||||| ||||  ||    
T  16583025 acctcgagtgattgtacaccggcaccttcgaacccttctttttttttcggaaccatcacaaacaattttgtgccacgtcatagacgatttttctttgttc 16583124  T
Q  734 ttctcatcaccct 746  Q
    |||||||||||||    
T  16583125 ttctcatcaccct 16583137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 547 - 818
Target Start/End: Complemental strand, 37311720 - 37311446
Alignment:
Q  547 cacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattg 645  Q
    |||| |||||||| |||||||||||| ||||||||||| ||||| ||||||| | |||| ||||||||||||||||||| |||||| |||  || || ||    
T  37311720 cacacaagtcaatcgggttgtcctcgacagtccctggggcacctacttttggctgaggatcaaaatagcatgtcctcccgctcctcatcaacctcgaatg 37311621  T
Q  646 attgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccc 745  Q
    ||| |||||| |||||||| ||||||| ||||||   | | ||||| ||  | ||  || |||||||||   ||||||| ||||| |||| || ||||||    
T  37311620 attatacaccagcaccttcaaatcctt-ctttttgatggatcatcacatgtgattccgtgccatgtcatcaacgatttttctttcttcttgtcgtcaccc 37311522  T
Q  746 tccttt---ttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||||   || ||||||| |||    || |||||||||||||||||||||||||||||| || ||||||||||||    
T  37311521 tcctttctgttgttcaactcaacgtttccctgattctgagacatatctacataaacaaattggcgatcaaaaccta 37311446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 537 - 744
Target Start/End: Complemental strand, 19470710 - 19470502
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |  |||||||| ||||||||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  19470710 tcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctagggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 19470611  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || |||||||||||||  ||||||||| ||||| ||||| | ||||||||| |  |  || |||  |||||||||| ||||||| ||||  ||||    
T  19470610 acctggactgattgtacaccgagaccttcgaacccttctttttttcggaaccatcacaaacaattatgtgtcatgtcatagacgatttttctttattctt 19470511  T
Q  736 ctcatcacc 744  Q
    |||||||||    
T  19470510 ctcatcacc 19470502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 513 - 739
Target Start/End: Complemental strand, 28272741 - 28272515
Alignment:
Q  513 attacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaat 611  Q
    ||||||||| |||||| |||||||||| | | ||| | ||||||||| |||||||| ||| |||||| | |||||||||||||| ||| |||||||||||    
T  28272741 attacaagtcattacatttaatcatctccttcgtcgcttaagtcaat-gggttgtcatcgacagtccttagggcacctgcttttagttgaggaccaaaat 28272643  T
Q  612 agcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgt 711  Q
    | || ||||| || |||||| | || || || ||||||||||||| |||||||||||   |  ||||||| ||||||||| ||||| ||| ||  |||||    
T  28272642 aacaagtccttccactcctccttagcctggaatgattgtacaccgacaccttcgaattgcttttttttacggaaccatcacattcgatttcgtgtcatgt 28272543  T
Q  712 cataggcgattttgctttcatcttctca 739  Q
    || || |||||| |||||| ||||||||    
T  28272542 cagagtcgatttggctttcttcttctca 28272515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 593 - 746
Target Start/End: Original strand, 23408893 - 23409047
Alignment:
Q  593 tttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttc-ctttttacagaaccatca 691  Q
    ||||||| |||||||||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||| |||||  ||||| |||||||||||    
T  23408893 tttggttgaggaccaaaatagcatgtcctcccgctcctcctcaaactcgactgattgtacaccggcaccttcgaacccttcttttttttcagaaccatca 23408992  T
Q  692 aattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
     |  |  || |||  |||||||||||||||||| ||||  |||||||||||||||    
T  23408993 caaacaattctgtgtcatgtcataggcgatttttctttgttcttctcatcaccct 23409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 523 - 673
Target Start/End: Original strand, 5421244 - 5421395
Alignment:
Q  523 attacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcct 621  Q
    |||||| | ||||||||||||  ||||| |||||||||||||||||||||  ||||||| |||||||||||||||| | |||||||||||||||||| ||    
T  5421244 attacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgagagtccctggggcacctgcttttggctgaggaccaaaatagcatgttct 5421343  T
Q  622 ccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttc 673  Q
     || |||||| |||  ||  | ||||| | |||| |||||||||||||||||    
T  5421344 gccgctcctcctcaacctcaaatgattatgcaccagcaccttcgaatccttc 5421395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 2918453 - 2918243
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||  |||||| || |  |||||| |||| |||||  |||||||| |||||||||||||||||||||||  |||||| |||    
T  2918453 tcttcctcgtcacacaagtcaaccgggttgcccactacagtccatggggcaccttgttttggttgaggaccaaaatagcatgtcctcctgctcctcctca 2918354  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || |||||||||||||||||||||||| ||||  ||||| |  |||||||| |  |  || ||| |||||||||||| |||||| ||||  ||||    
T  2918353 acctcgactgattgtacaccggcaccttcgaacccttatttttttcgaaaccatcacaaacaattctgtgccatgtcataggtgatttttctttattctt 2918254  T
Q  736 ctcatcaccct 746  Q
    |||||||||||    
T  2918253 ctcatcaccct 2918243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 537 - 667
Target Start/End: Original strand, 35492647 - 35492778
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |  ||||||||||| |||||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  35492647 tcttcctcgtcacacaagtcaatcgggttgcccactacagtccctggggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 35492746  T
Q  636 ggctagattgattgtacaccggcaccttcgaa 667  Q
      || || | ||||||||||||||||||||||    
T  35492747 acctcgagtaattgtacaccggcaccttcgaa 35492778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 3936510 - 3936356
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  3936510 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 3936411  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  3936410 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 3936356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 28476507 - 28476661
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || |||||||| |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  28476507 tcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 28476606  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || ||||||||||| |||||||||||| ||||| ||||| | ||||||||    
T  28476607 acctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatc 28476661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 43983727 - 43983881
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  43983727 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 43983826  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  43983827 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 43983881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 706 - 818
Target Start/End: Complemental strand, 23720016 - 23719904
Alignment:
Q  706 ccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcgg 805  Q
    ||||||||| ||||||||| ||||| |||| || |||||||||||||| |||| || |||    || |||||||||||||||||||||||||||||| ||    
T  23720016 ccatgtcatcggcgatttttctttcttcttgtcgtcaccctcctttttgttcacctcaacgtttccctgattctgagacatatctacataaacaaattgg 23719917  T
Q  806 tgatcaaaaccta 818  Q
     ||||||||||||    
T  23719916 cgatcaaaaccta 23719904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 17425791 - 17425945
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || || ||||| |||||| |  ||||||||| || ||||  |||||||| |||||  ||||||||||||||||| |||||| |||    
T  17425791 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggactgaaatagcatgtcctcccgctcctcctca 17425890  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  17425891 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 17425945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 22002827 - 22002981
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  22002827 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 22002926  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || ||||||||||| |||||||||||| ||||| ||||| | ||||||||    
T  22002927 acctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatc 22002981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 592 - 746
Target Start/End: Original strand, 3942558 - 3942712
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatca 691  Q
    |||| ||| |||||||||||||||| ||||||| |||||| |||  ||  | |||||||||||||||||||||||| ||||| ||||| |  |||||||     
T  3942558 ttttagttgaggaccaaaatagcatatcctcccgctcctcctcaacctcaagtgattgtacaccggcaccttcgaacccttctttttttcgaaaccatcg 3942657  T
Q  692 aattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
     |  |  || ||| ||| ||||||||||||||| ||||  |||||||||||||||    
T  3942658 caaacaattctgtgccacgtcataggcgatttttctttgctcttctcatcaccct 3942712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 582 - 672
Target Start/End: Complemental strand, 40676461 - 40676371
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatcctt 672  Q
    ||||||||  ||||| || ||||| |||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||||||||    
T  40676461 gggcaccttgttttgattaaggacgaaaatagcatgtcctcccgctcctcctcaaccttgactgattgtacaccggcaccttcgaatcctt 40676371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 15891204 - 15891134
Alignment:
Q  366 ttttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtacca 436  Q
    ||||| ||||||||||||||||| |||||||||   ||||||||||||| |||||||||||||| ||||||    
T  15891204 ttttaatcgaaattattcaatacgcgactttaatcaaaattattcaatacgcgactttattcaaagtacca 15891134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 509 - 793
Target Start/End: Original strand, 20989350 - 20989632
Alignment:
Q  509 agacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggacca 607  Q
    ||||||||||||  |||||| |||||||||| ||| ||||| |||||||  ||||||||||||| || | | | |||||| ||||||| ||| ||||| |    
T  20989350 agacattacaagccattacatttaatcatctccctcgtcacttaagtcagctgggttgtcctcgacaattcgtggggcacttgctttttgttgaggacaa 20989449  T
Q  608 aaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaat---ccttcctttttacagaaccatcaaattcggttttgt 704  Q
    ||||| || ||||| || |||||  |||  ||||| ||||| |||||| ||||  || |||     ||  ||||||| ||||||||| ||| | || |||    
T  20989450 aaataacaagtccttccgctccttctcaacctagactgattatacaccagcacaatcaaatttctttttttttttacggaaccatcacatttgattatgt 20989549  T
Q  705 accatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctaca 793  Q
      ||||||| || ||||||||||||| |||||   ||||||||||||   ||||||||||||  ||| ||| || ||||||||||||||    
T  20989550 gtcatgtcacagtcgattttgctttcttcttc---tcaccctccttt---ttcaactgaacatcaccctgagtccgagacatatctaca 20989632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 257 - 363
Target Start/End: Complemental strand, 28745936 - 28745830
Alignment:
Q  257 actttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattcaatatgcgactttatttgaaattattc 356  Q
    |||||||||||| || |||||||| ||||| || ||||  |||||||||||| |||| ||||| |  |||||||||| || ||||||||| || ||||||    
T  28745936 actttattcgaatttattcaatacacaactttaatcgaatttattcaatacaaaactttattcaaatttattcaatacgcaactttatttaaatttattc 28745837  T
Q  357 aatacgc 363  Q
    |||||||    
T  28745836 aatacgc 28745830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 592 - 690
Target Start/End: Complemental strand, 39799018 - 39798920
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||  |  || ||||||||||| |||||||||||| | ||| ||||| ||||||||||    
T  39799018 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaaccgcgagtgattgtacactggcaccttcgaaccattctttttttcagaaccatc 39798920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 509 - 597
Target Start/End: Original strand, 18333538 - 18333626
Alignment:
Q  509 agacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggcacctgcttttgg 597  Q
    ||||||||||||  |||||| |||||||||| ||| ||| | |||||||||||||||||||||  |||| | ||||||||| |||||||    
T  18333538 agacattacaagccattacatttaatcatctccctcgtcgcttaagtcaattgggttgtcctcaacagttcatgggcacctccttttgg 18333626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 313
Target Start/End: Complemental strand, 28745934 - 28745826
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaa 304  Q
    ||||||| |||||||| ||||| |||||||| ||||| |||||||||||   ||||||||| || || |||||||||||||| ||||  |  ||||||||    
T  28745934 tttattcgaatttattcaatacacaactttaatcgaatttattcaatacaaaactttattcaaatttattcaatacgcaactttatttaaatttattcaa 28745835  T
Q  305 tacacaact 313  Q
    ||| |||||    
T  28745834 tacgcaact 28745826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 454
Target Start/End: Original strand, 5421097 - 5421202
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| |||||||||||||| |||||| |||||  ||||||||| || | || | ||||||||| ||||||  |||| || ||    
T  5421097 aattattcaaaacgcgactttaatcgaaattattcaaaacacgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagca 5421196  T
Q  449 aaatgt 454  Q
    ||||||    
T  5421197 aaatgt 5421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 24108028 - 24107919
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| |||||||||||| | |  ||| |||||  |||||||||||| | |||| ||||||||| ||||||  |||| || ||    
T  24108028 aattattcaaaacgcgactttaatcgaaattattccaaatgcgattttaattgaaattattcaaaacgcgaatttattcaaagtaccaatatgtcaagca 24107929  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  24107928 aaatgtacca 24107919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 28745880 - 28745823
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgacttta 262  Q
    |||||||||||||||| ||||||||||||||||  || ||||||||||||| ||||||    
T  28745880 tttattcaaatttattcaatacgcaactttatttaaatttattcaatacgcaacttta 28745823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 15891203 - 15891143
Alignment:
Q  232 tttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattc 292  Q
    |||| |||||||||||||||||||||||||| || ||||| |||||||||| ||| |||||    
T  15891203 tttaatcgaaattattcaatacgcgactttaatcaaaattattcaatacgcgactttattc 15891143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 509 - 572
Target Start/End: Original strand, 12764505 - 12764568
Alignment:
Q  509 agacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcg 572  Q
    ||||||||||||  |||||| |||||||||| |||   ||||||||||||||||||||||||||    
T  12764505 agacattacaagccattacatttaatcatctccctcagcacataagtcaattgggttgtcctcg 12764568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 15891534 - 15891621
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| ||||||||||| |||||||||||||||  | || ||||| |||||| ||||||||||| || ||| |||  ||||||||||||    
T  15891534 gaacaataaaacttccaggtgaatgcttgagaactgttatttagcaagtttgaatttatccaatttaagaagtatgacaattgttgta 15891621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 31991823 - 31991910
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| ||||||||| |||||||||||||||||| | ||||| |  | |||| |  |||||||| ||||||||||| ||||||||||||    
T  31991823 gaacaataaaactttcgggtgaatgcttgagagctgttgttcaataggtttgaccttatccaatttcagaggtaagacaattgttgta 31991910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 347 - 397
Target Start/End: Complemental strand, 15891196 - 15891146
Alignment:
Q  347 gaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
    ||||||||||||||||||| |||| || |||||||||||||| ||||||||    
T  15891196 gaaattattcaatacgcgactttaatcaaaattattcaatacgcgacttta 15891146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 17538174 - 17538065
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||| | |||||| |||| |||||||||||| | |  ||| |||||  |||||||||||| | |||| ||||||||| ||||||  |||| || ||    
T  17538174 aattattcgaaacgcgactttaatcgaaattattccaaatgcgattttaattgaaattattcaaaacgcgaatttattcaaagtaccaatatgtcaagca 17538075  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  17538074 aaatgtacca 17538065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 20148696 - 20148729
Alignment:
Q  160 taatgtaatgataggacatatttaggaactttat 193  Q
    ||||||||||||||||||||||||||||||||||    
T  20148696 taatgtaatgataggacatatttaggaactttat 20148729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 292
Target Start/End: Complemental strand, 28272845 - 28272780
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattc 292  Q
    ||||||||||||||| |||||| |||||| ||||||||| || || ||| |||||||||| |||||    
T  28272845 gcaactttattcgaatttattccatacgcaactttattcaaatttattcgatacgcaactttattc 28272780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 28745936 - 28745823
Alignment:
Q  230 actttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattc 329  Q
    |||||||||||| ||||||||||| | |||||| ||||| || ||||||||  |||| ||||| |  ||||||||||| ||||| ||||  |  ||||||    
T  28745936 actttattcgaatttattcaatacacaactttaatcgaatttattcaatacaaaactttattcaaatttattcaatacgcaactttatttaaatttattc 28745837  T
Q  330 aatatgcgacttta 343  Q
    |||| || ||||||    
T  28745836 aatacgcaacttta 28745823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 18333393 - 18333485
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattc 319  Q
    ||||||||||||||| |||||||| || | |||||||||||| || | |||||| ||||| |||||    |||||||| |||||||| |||||    
T  18333393 gcaactttattcgaatttattcaacacacaactttattcgaatttatccaatacacaactttattcctatttattcaaaacacaactttattc 18333485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 28272840 - 28272780
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattc 265  Q
    ||||||| ||||||||  |||||||||||||||| || |||||| |||||| |||||||||    
T  28272840 tttattcgaatttattccatacgcaactttattcaaatttattcgatacgcaactttattc 28272780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 739
Target Start/End: Original strand, 14913038 - 14913133
Alignment:
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctca 739  Q
    ||||||||||||| |||||||||||   |  |||| |||||||||||| ||||  ||||||  ||||||| ||  |||||||||||| ||||||||    
T  14913038 tgattgtacaccgacaccttcgaattgctttttttaacagaaccatcagattcaattttgtgtcatgtcacagttgattttgctttcttcttctca 14913133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 318 - 373
Target Start/End: Complemental strand, 15891198 - 15891143
Alignment:
Q  318 tcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattc 373  Q
    |||| ||||||||||| ||||||||| |  |||||||||||||||||| |||||||    
T  15891198 tcgaaattattcaatacgcgactttaatcaaaattattcaatacgcgactttattc 15891143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 27650314 - 27650401
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| ||| ||||| ||||||||||||||||| || ||||| |  | |||| |  ||||||||||||||||||||  |||||||||||    
T  27650314 gaacaatataactttcgggtgaatgcttgagatttgttgttcaacaggtttgaccttatccaacttcagaggtaagtcaattgttgta 27650401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 6902598 - 6902644
Alignment:
Q  195 taatgtaacttttattcaaatttatttaatacgcaactttattcgaa 241  Q
    ||||||||||||||||||||||||||  ||| | |||||||||||||    
T  6902598 taatgtaacttttattcaaatttattccataagtaactttattcgaa 6902644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 12764378 - 12764443
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaaattg-ttcaatacgcaactatattc 292  Q
    ||||||||||||||| ||||||||||| | ||||||||| |||||| |||||| ||||||| |||||    
T  12764378 gcaactttattcgaatttattcaatacacaactttattc-aaattgattcaatgcgcaactttattc 12764443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 606 - 672
Target Start/End: Complemental strand, 23786806 - 23786740
Alignment:
Q  606 caaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatcctt 672  Q
    |||||||||||||| |||| |||||| |||  || || ||||||||||| |||||||||||| ||||    
T  23786806 caaaatagcatgtcatcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaaccctt 23786740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 288 - 398
Target Start/End: Complemental strand, 28745932 - 28745822
Alignment:
Q  288 tattcgatattattcaatacacaactatattcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaata 387  Q
    |||||||  ||||||||||||||||| || ||||  ||||||||||    ||||||||  || ||||||||||||| | ||||||  || ||||||||||    
T  28745932 tattcgaatttattcaatacacaactttaatcgaatttattcaatacaaaactttattcaaatttattcaatacgcaactttatttaaatttattcaata 28745833  T
Q  388 cacgactttaa 398  Q
    | | |||||||    
T  28745832 cgcaactttaa 28745822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 296 - 373
Target Start/End: Complemental strand, 24108027 - 24107950
Alignment:
Q  296 attattcaatacacaactatattcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattc 373  Q
    ||||||||| || | ||| || |||| ||||||| | |||||| |||| |||||||||||||| |||||| |||||||    
T  24108027 attattcaaaacgcgactttaatcgaaattattccaaatgcgattttaattgaaattattcaaaacgcgaatttattc 24107950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 1e-56; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 523 - 818
Target Start/End: Original strand, 12397902 - 12398200
Alignment:
Q  523 attacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggcacctgcttttggttcaggaccaaaatagcatgtcctc 622  Q
    |||||| | ||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||| |||||||||    
T  12397902 attacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctgggcacctgcttttggctgaggaccaaaatatcatgtcctc 12398001  T
Q  623 cctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgatt 722  Q
    || |||||| |||  || || ||||| ||||||  |||||||||||||||| |||| || || |||||| ||  | ||| || |||||||||  | ||||    
T  12398002 ccgctcctcctcaacctcgaatgattatacaccaacaccttcgaatccttctttttgacggatccatcatatgtgatttcgtgccatgtcatccgtgatt 12398101  T
Q  723 ttgctttcatcttctcatcaccctccttttt---attcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    || ||||| |||| || ||||||||||| ||   |||||||| |||    || ||||||||||||||||||||||||| ||||||||||||||||||||    
T  12398102 tttctttcttcttgtcgtcaccctccttcttcttattcaactcaacgtttccctgattctgagacatatctacataaaaaaatcggtgatcaaaaccta 12398200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 7 - 253
Target Start/End: Complemental strand, 14482576 - 14482318
Alignment:
Q  7 aaacatatatagttaattctgcataatacatgnnnnnnn-gaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaat 105  Q
    |||||||||||||| |||||||||||||||||        |||| |||| ||||||||| |||||||||||||||||||| |||||||| |||||| |||    
T  14482576 aaacatatatagttgattctgcataatacatgtttgttttgaatggaacaataaaactttcgggtgaatgcttgagagttgttgtttagcaagtttgaat 14482477  T
Q  106 ttatccaac-ttcagaggtaaaacaattgttgtaccacatatctctacccgaatttaatgtaat-----gataggacatatttaggaactttatttaat- 198  Q
    ||| | ||  ||||||||||| | |||||||||||||| ||||||||||||||| |||||||||     |||| |||||||||||||||||||| ||||     
T  14482476 ttaccaaaaattcagaggtaagataattgttgtaccacgtatctctacccgaatgtaatgtaatgtaacgatatgacatatttaggaactttatgtaatg 14482377  T
Q  199 ----gtaacttttattcaaatttatttaatacgcaactttattcgaaattattcaatac 253  Q
        ||||||||||||| | |||||||||||| |||||||||||||| ||||| |||||    
T  14482376 taaagtaacttttattcgactttatttaatacacaactttattcgaatttatttaatac 14482318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 512 - 818
Target Start/End: Complemental strand, 32133782 - 32133475
Alignment:
Q  512 cattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggca-cctgcttttggttcaggaccaaaa 610  Q
    ||||| |||| |||||| | | |||||||||| |||||| | ||||||  ||||||| ||| ||||||||||| | ||||||||||| | ||||||||||    
T  32133782 cattagaagtcattacattcattcatcttcctcgtcacacaggtcaatcaggttgtcatcgacagtccctggggaacctgcttttggctgaggaccaaaa 32133683  T
Q  611 tagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttccttttt-acagaaccatcaaattcggttttgtaccat 709  Q
    |||||||||||| | |||||| |||| || || |||||| ||||| |||||||| |||| | ||||||| |||||||||||| ||  | ||  || ||||    
T  32133682 tagcatgtcctctcactcctcttcagcctcgactgattgcacaccagcaccttcaaatc-tccctttttgacagaaccatcacatgtgattccgtgccat 32133584  T
Q  710 gtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgat 809  Q
    ||||||||||||||| ||||| ||||  ||||||||||||| || ||||||| ||     || |||||||||||||||||||||||||||||| || |||    
T  32133583 gtcataggcgatttttctttcttcttggcatcaccctccttgttgttcaactcaatgtttccctgattctgagacatatctacataaacaaattggcgat 32133484  T
Q  810 caaaaccta 818  Q
    |||||||||    
T  32133483 caaaaccta 32133475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 505 - 672
Target Start/End: Complemental strand, 20241472 - 20241304
Alignment:
Q  505 aattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccc-tgggcacctgcttttggttcagg 603  Q
    ||||||||||||||||  |||||| | |||||||||||| |||||| ||||||||||||||||||||  ||||||| |||| |||||||||||||| |||    
T  20241472 aattagacattacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcaacagtcccttgggaacctgcttttggttgagg 20241373  T
Q  604 accaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatcctt 672  Q
    |||||||||||||  |||||  |||||| |||  || ||  |||| |||||||||||||||||||||||    
T  20241372 accaaaatagcataacctcctgctcctcctcaaactggaacgattatacaccggcaccttcgaatcctt 20241304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 20241879 - 20241718
Alignment:
Q  8 aacatatatagttaattctgcataatacatgnnnnnnngaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaattt 107  Q
    ||||||||||| | ||| |||||||||||||       |||  |||| |||||||||| |||||||||||||||||   ||||||||||| ||| |||||    
T  20241879 aacatatatagatgattgtgcataatacatgttgttttgaaaggaacaataaaacttctgggtgaatgcttgagagcagttgtttagaaaatttgaattt 20241780  T
Q  108 atccaacttcagaggtaaaacaattgttgtaccacatatctctacccgaatttaatgtaatg 169  Q
    |||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||    
T  20241779 atccaatttcagaggtaagataattgttgtaccacatatctctacccgaatgtaatgtaatg 20241718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 505 - 672
Target Start/End: Complemental strand, 22135456 - 22135288
Alignment:
Q  505 aattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccc-tgggcacctgcttttggttcagg 603  Q
    ||||||||||||||||  |||||| | |||||||||||| |||||| ||||||||||||||||||||  ||||||| |||| |||||||||||||| |||    
T  22135456 aattagacattacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcaacagtcccttgggaacctgcttttggttgagg 22135357  T
Q  604 accaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatcctt 672  Q
    |||||||||||||  |||||  |||||| |||  || ||  |||| |||||||||||||||||||||||    
T  22135356 accaaaatagcataacctcctgctcctcctcaaactggaacgattatacaccggcaccttcgaatcctt 22135288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 22135863 - 22135702
Alignment:
Q  8 aacatatatagttaattctgcataatacatgnnnnnnngaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaattt 107  Q
    ||||||||||| | ||| |||||||||||||       |||  |||| |||||||||| |||||||||||||||||   ||||||||||| ||| |||||    
T  22135863 aacatatatagatgattgtgcataatacatgttgttttgaaaggaacaataaaacttctgggtgaatgcttgagagcagttgtttagaaaatttgaattt 22135764  T
Q  108 atccaacttcagaggtaaaacaattgttgtaccacatatctctacccgaatttaatgtaatg 169  Q
    |||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||    
T  22135763 atccaatttcagaggtaagataattgttgtaccacatatctctacccgaatgtaatgtaatg 22135702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 505 - 672
Target Start/End: Complemental strand, 22142809 - 22142641
Alignment:
Q  505 aattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccc-tgggcacctgcttttggttcagg 603  Q
    ||||||||||||||||  |||||| | |||||||||||| |||||| ||||||||||||||||||||  ||||||| |||| |||||||||||||| |||    
T  22142809 aattagacattacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcaacagtcccttgggaacctgcttttggttgagg 22142710  T
Q  604 accaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatcctt 672  Q
    |||||||||||||  |||||  |||||| |||  || ||  |||| |||||||||||||||||||||||    
T  22142709 accaaaatagcataacctcctgctcctcctcaaactggaacgattatacaccggcaccttcgaatcctt 22142641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 22143216 - 22143055
Alignment:
Q  8 aacatatatagttaattctgcataatacatgnnnnnnngaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaattt 107  Q
    ||||||||||| | ||| |||||||||||||       |||  |||| |||||||||| |||||||||||||||||   ||||||||||| ||| |||||    
T  22143216 aacatatatagatgattgtgcataatacatgttgttttgaaaggaacaataaaacttctgggtgaatgcttgagagcagttgtttagaaaatttgaattt 22143117  T
Q  108 atccaacttcagaggtaaaacaattgttgtaccacatatctctacccgaatttaatgtaatg 169  Q
    |||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||    
T  22143116 atccaatttcagaggtaagataattgttgtaccacatatctctacccgaatgtaatgtaatg 22143055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 504 - 746
Target Start/End: Original strand, 14123794 - 14124036
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcag 602  Q
    ||||||| |||||||||| |||||| | | |||||||| | |||||| |||||||| |||||| || |  ||||||||| ||||||| |||||| || ||    
T  14123794 caattaggcattacaagtcattacattcattcatcttcatcgtcacacaagtcaatcgggttgcccgctacagtccctgcggcacctacttttgattaag 14123893  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    ||||||| |||||||||||||| |||||| | |  || || |||||||||| | ||||||||||||||||| |||| || || |||||| ||  | ||      
T  14123894 gaccaaagtagcatgtcctcccactcctccttaacctcgactgattgtacatcagcaccttcgaatccttc-ttttgacggacccatcacatgtgattcc 14123992  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
    || |||||||||| |||||||| ||||| |||||||||||||||    
T  14123993 gtgccatgtcatatgcgatttttctttcttcttctcatcaccct 14124036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 323 - 462
Target Start/End: Complemental strand, 20241652 - 20241513
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactt 422  Q
    ||||||||||| ||||||||| | ||||||||||||||||||  |||| || ||||||| ||||||||||||||||  |||||||||||||| | |||||    
T  20241652 attattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgactttaatcgaaattattcaatacgtgactt 20241553  T
Q  423 tattcaatgtaccacaatgtaaaccaaaatgtaccaaaat 462  Q
    ||||||| |||||  ||||| ||||||||| |||||||||    
T  20241552 tattcaaagtaccttaatgtcaaccaaaatataccaaaat 20241513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 323 - 462
Target Start/End: Complemental strand, 22135636 - 22135497
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactt 422  Q
    ||||||||||| ||||||||| | ||||||||||||||||||  |||| || ||||||| ||||||||||||||||  |||||||||||||| | |||||    
T  22135636 attattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgactttaatcgaaattattcaatacgtgactt 22135537  T
Q  423 tattcaatgtaccacaatgtaaaccaaaatgtaccaaaat 462  Q
    ||||||| |||||  ||||| ||||||||| |||||||||    
T  22135536 tattcaaagtaccttaatgtcaaccaaaatataccaaaat 22135497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 323 - 462
Target Start/End: Complemental strand, 22142989 - 22142850
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactt 422  Q
    ||||||||||| ||||||||| | ||||||||||||||||||  |||| || ||||||| ||||||||||||||||  |||||||||||||| | |||||    
T  22142989 attattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgactttaatcgaaattattcaatacgtgactt 22142890  T
Q  423 tattcaatgtaccacaatgtaaaccaaaatgtaccaaaat 462  Q
    ||||||| |||||  ||||| ||||||||| |||||||||    
T  22142889 tattcaaagtaccttaatgtcaaccaaaatataccaaaat 22142850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 504 - 739
Target Start/End: Complemental strand, 30764103 - 30763864
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||||||||||||  |||||| | |||||| ||||| |||||| ||||||||||||||||||||| |||||| | ||||||  |||||||||| ||    
T  30764103 caattagacattacaagccattacattcaatcattttcctcgtcacacaagtcaattgggttgtcctcgacagtccatggggcactcgcttttggttgag 30764004  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttccttttt---acagaaccatcaaattcggt 699  Q
    |||| ||||| |||||| | || |||||| |||| || || || ||||| |||||||| |||||||  ||  |||||   || ||||||||| ||||| |    
T  30764003 gaccgaaataacatgtcattccgctcctcctcagcctggaatggttgtaaaccggcactttcgaatagtttttttttttaacggaaccatcacattcgat 30763904  T
Q  700 tttgtaccatgtcataggcgattttgctttcatcttctca 739  Q
    | ||| |||||||| || |||||| |||||| ||||||||    
T  30763903 tctgtgccatgtcacagtcgatttagctttcttcttctca 30763864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 33201368 - 33201534
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgg-gcacctgcttttggttcag 602  Q
    |||||||||||||||||| |||||| | |||||||||||| |||||| ||||||||| ||||||||||| || ||||||| ||||||| |||||||| ||    
T  33201368 caattagacattacaagtcattacattcaatcatcttcctcgtcacacaagtcaattaggttgtcctcgacattccctggcgcacctgattttggttgag 33201467  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatc 669  Q
    |||| | ||| |||||||| || ||| || |||| || || || || ||||||||||| ||||||||    
T  33201468 gaccgatataacatgtccttccgctcttcctcagcctggaatggttatacaccggcacattcgaatc 33201534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 257 - 441
Target Start/End: Complemental strand, 30764324 - 30764140
Alignment:
Q  257 actttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattcaatatgcgactttatttgaaattattc 356  Q
    |||||| ||||| || | |||||||||||| |  | || |||||||||||| | ||| || |||| |||||||||||  | |||||| | ||| ||||||    
T  30764324 actttaatcgaatttatgcaatacgcaactttcatagaaattattcaatacgcgactttaatcgaaattattcaatacacaactttaatcgaatttattc 30764225  T
Q  357 aatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatg 441  Q
    ||||||| | |||| ||||| ||||||||||| | |||||||  ||| |||||||||||||||||||||||||||||||| ||||    
T  30764224 aatacgcaactttaatcgaatttattcaatacgcaactttaatcgaatttattcaatatgcgactttattcaatgtaccaaaatg 30764140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 213 - 373
Target Start/End: Complemental strand, 30764314 - 30764154
Alignment:
Q  213 aatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaac 312  Q
    |||||||  |||||||||||||  | |||||||||||||||||||||||| |||||||| |||||||| ||||| || ||||  ||||||||||| ||||    
T  30764314 aatttatgcaatacgcaactttcatagaaattattcaatacgcgactttaatcgaaattattcaatacacaactttaatcgaatttattcaatacgcaac 30764215  T
Q  313 tatattcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattc 373  Q
    | || ||||  |||||||||| || |||||| | ||| |||||||||| |||| |||||||    
T  30764214 tttaatcgaatttattcaatacgcaactttaatcgaatttattcaatatgcgactttattc 30764154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 227 - 397
Target Start/End: Complemental strand, 30764327 - 30764157
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatatta 326  Q
    ||||||||| ||||| |||| |||||||| |||||  | |||||| |||||||||| ||| || |||| |||||||||||||||||| || ||||  |||    
T  30764327 gcaactttaatcgaatttatgcaatacgcaactttcatagaaattattcaatacgcgactttaatcgaaattattcaatacacaactttaatcgaattta 30764228  T
Q  327 ttcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
    ||||||| || |||||| | ||| ||||||||||||| | |||| ||||| ||||||||||  ||||||||    
T  30764227 ttcaatacgcaactttaatcgaatttattcaatacgcaactttaatcgaatttattcaatatgcgacttta 30764157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 32026712 - 32026502
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||||||  ||||| |||||||| |||||| || |  ||||||||||| |||||  |||||||| |||||||||||||||||||| ||| |||||| |||    
T  32026712 tcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggaccaaaatagcatgtccacccgctcctcctca 32026613  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || | |||||||||||||||||||||| ||||| ||||| ||||||||| | |     ||| || ||||||||||||||||||| ||||  ||||    
T  32026612 acctcgactaattgtacaccggcaccttcgaacccttctttttttcagaaccattacaaataatttcgtgccatgtcataggcgatttttctttgttctt 32026513  T
Q  736 ctcatcaccct 746  Q
     ||||||||||    
T  32026512 ttcatcaccct 32026502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 32036771 - 32036561
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||||||  ||||| |||||||| |||||| || |  ||||||||||| |||||  |||||||| |||||||||||||||||||| ||| |||||| |||    
T  32036771 tcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggaccaaaatagcatgtccacccgctcctcctca 32036672  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || | |||||||||||||||||||||| ||||| ||||| ||||||||| | |     ||| || ||||||||||||||||||| ||||  ||||    
T  32036671 acctcgactaattgtacaccggcaccttcgaacccttctttttttcagaaccattacaaataatttcgtgccatgtcataggcgatttttctttgttctt 32036572  T
Q  736 ctcatcaccct 746  Q
     ||||||||||    
T  32036571 ttcatcaccct 32036561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 27641176 - 27641330
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || |||||||| |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  27641176 tcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 27641275  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  27641276 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 27641330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 530 - 739
Target Start/End: Complemental strand, 21864012 - 21863798
Alignment:
Q  530 ttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctc 628  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||| || |||||| |||||||| |  ||||||||| || |||||||| || ||     
T  21864012 ttaatcatcttcctcgtcacataagtcaattgggttgtcctcgacagtctctggggcacatgcttttgatcgaggaccaaagtaacatgtccttccgctt 21863913  T
Q  629 ctcgtcaggctagattgattgtacaccggcaccttcgaa-tccttccttttt---acagaaccatcaaattcggttttgtaccatgtcataggcgatttt 724  Q
    ||| |||   | || |||||||||| |||||||||| || | |||  |||||   || ||||||||||||||| || ||| |||||||| || ||||||     
T  21863912 ctcctcaacttggaatgattgtacatcggcaccttcaaattgctttttttttttaacggaaccatcaaattcgattatgtgccatgtcacagtcgatttc 21863813  T
Q  725 gctttcatcttctca 739  Q
    |||||| | ||||||    
T  21863812 gctttccttttctca 21863798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 6206486 - 6206640
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  6206486 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 6206585  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  6206586 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 6206640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 11693453 - 11693607
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  11693453 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 11693552  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  11693553 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 11693607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 537 - 672
Target Start/End: Complemental strand, 13616988 - 13616852
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||||||||||||| |||||||| ||||||  | |  ||||||||||| |||||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  13616988 tcttccttgtcacacaagtcaatcgggttgctcgctacagtccctggggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 13616889  T
Q  636 ggctagattgattgtacaccggcaccttcgaatcctt 672  Q
      || || ||||||||||||| ||||| |||| ||||    
T  13616888 acctcgagtgattgtacaccgacacctacgaaccctt 13616852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 540 - 690
Target Start/End: Original strand, 29067597 - 29067748
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggc 638  Q
    ||||||||||| |||||||| ||||| ||| |  ||| ||||| |||||||  |||||||| |||||||||||||||||||||||| ||| || |||  |    
T  29067597 tccttgtcacacaagtcaatcgggttttccgctacagcccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcatcctcaacc 29067696  T
Q  639 tagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
    | || |||||||||||||  ||||||||| ||||| ||||| | ||||||||    
T  29067697 tcgagtgattgtacaccgaaaccttcgaacccttctttttttcggaaccatc 29067748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 540 - 690
Target Start/End: Original strand, 29109186 - 29109337
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggc 638  Q
    ||||||||||| |||||||| ||||| ||| |  ||| ||||| |||||||  |||||||| |||||||||||||||||||||||| ||| || |||  |    
T  29109186 tccttgtcacacaagtcaatcgggttttccgctacagcccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcatcctcaacc 29109285  T
Q  639 tagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
    | || |||||||||||||  ||||||||| ||||| ||||| | ||||||||    
T  29109286 tcgagtgattgtacaccgaaaccttcgaacccttctttttttcggaaccatc 29109337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 20241973 - 20242104
Alignment:
Q  7 aaacatatatagttaattctgcataatacatgnnnnnnngaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatt 106  Q
    |||||||||||| | ||||||||| |||||||       |||  |||| ||||||||||| ||||||||||||||| || |||||||| |||||| ||||    
T  20241973 aaacatatatagctgattctgcatgatacatgttgttttgaaaggaacaataaaacttccaggtgaatgcttgagaattgttgtttagcaagtttgaatt 20242072  T
Q  107 tatccaacttcagaggtaaaacaattgttgta 138  Q
    ||||||| || |||||||  ||||||||||||    
T  20242073 tatccaatttaagaggtaggacaattgttgta 20242104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 22135957 - 22136088
Alignment:
Q  7 aaacatatatagttaattctgcataatacatgnnnnnnngaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatt 106  Q
    |||||||||||| | ||||||||| |||||||       |||  |||| ||||||||||| ||||||||||||||| || |||||||| |||||| ||||    
T  22135957 aaacatatatagctgattctgcatgatacatgttgttttgaaaggaacaataaaacttccaggtgaatgcttgagaattgttgtttagcaagtttgaatt 22136056  T
Q  107 tatccaacttcagaggtaaaacaattgttgta 138  Q
    ||||||| || |||||||  ||||||||||||    
T  22136057 tatccaatttaagaggtaggacaattgttgta 22136088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 22143310 - 22143441
Alignment:
Q  7 aaacatatatagttaattctgcataatacatgnnnnnnngaattgaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatt 106  Q
    |||||||||||| | ||||||||| |||||||       |||  |||| ||||||||||| ||||||||||||||| || |||||||| |||||| ||||    
T  22143310 aaacatatatagctgattctgcatgatacatgttgttttgaaaggaacaataaaacttccaggtgaatgcttgagaattgttgtttagcaagtttgaatt 22143409  T
Q  107 tatccaacttcagaggtaaaacaattgttgta 138  Q
    ||||||| || |||||||  ||||||||||||    
T  22143410 tatccaatttaagaggtaggacaattgttgta 22143441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 720 - 835
Target Start/End: Complemental strand, 20241279 - 20241158
Alignment:
Q  720 attttgctttcatcttctcatcaccctcctttttattcaactgaacacaac-ct-----tgattctgagacatatctacataaacaaatcggtgatcaaa 813  Q
    ||||||||||| ||||||  |||||||| ||||| ||||||||||||  || ||     |||||| ||||||||||||||||| ||||||||||||||||    
T  20241279 attttgctttcttcttcttgtcaccctcgtttttgttcaactgaacatcactctaattctgattcggagacatatctacataaccaaatcggtgatcaaa 20241180  T
Q  814 acctaaactaattctaacaatt 835  Q
    || ||||||||| |||||||||    
T  20241179 acataaactaatcctaacaatt 20241158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 244 - 397
Target Start/End: Complemental strand, 20241704 - 20241551
Alignment:
Q  244 tattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattcaatatgcgacttta 343  Q
    |||||| |||||||||||| |||||| | ||||||| || ||| || || | |||||||||||| | ||| || |||| ||||||||||| ||| |||||    
T  20241704 tattcagtacgcgactttaatcgaaactattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggcttta 20241605  T
Q  344 tttgaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
     |  ||||||| |||||| ||| |||| |||||||||||||||||  |||||||    
T  20241604 atcaaaattatgcaatacacgactttaatcgaaattattcaatacgtgacttta 20241551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 720 - 835
Target Start/End: Complemental strand, 22135263 - 22135142
Alignment:
Q  720 attttgctttcatcttctcatcaccctcctttttattcaactgaacacaac-ct-----tgattctgagacatatctacataaacaaatcggtgatcaaa 813  Q
    ||||||||||| ||||||  |||||||| ||||| ||||||||||||  || ||     |||||| ||||||||||||||||| ||||||||||||||||    
T  22135263 attttgctttcttcttcttgtcaccctcgtttttgttcaactgaacatcactctaattctgattcggagacatatctacataaccaaatcggtgatcaaa 22135164  T
Q  814 acctaaactaattctaacaatt 835  Q
    || ||||||||| |||||||||    
T  22135163 acataaactaatcctaacaatt 22135142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 244 - 397
Target Start/End: Complemental strand, 22135688 - 22135535
Alignment:
Q  244 tattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattcaatatgcgacttta 343  Q
    |||||| |||||||||||| |||||| | ||||||| || ||| || || | |||||||||||| | ||| || |||| ||||||||||| ||| |||||    
T  22135688 tattcagtacgcgactttaatcgaaactattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggcttta 22135589  T
Q  344 tttgaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
     |  ||||||| |||||| ||| |||| |||||||||||||||||  |||||||    
T  22135588 atcaaaattatgcaatacacgactttaatcgaaattattcaatacgtgacttta 22135535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 720 - 835
Target Start/End: Complemental strand, 22142616 - 22142495
Alignment:
Q  720 attttgctttcatcttctcatcaccctcctttttattcaactgaacacaac-ct-----tgattctgagacatatctacataaacaaatcggtgatcaaa 813  Q
    ||||||||||| ||||||  |||||||| ||||| ||||||||||||  || ||     |||||| ||||||||||||||||| ||||||||||||||||    
T  22142616 attttgctttcttcttcttgtcaccctcgtttttgttcaactgaacatcactctaattctgattcggagacatatctacataaccaaatcggtgatcaaa 22142517  T
Q  814 acctaaactaattctaacaatt 835  Q
    || ||||||||| |||||||||    
T  22142516 acataaactaatcctaacaatt 22142495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 244 - 397
Target Start/End: Complemental strand, 22143041 - 22142888
Alignment:
Q  244 tattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattcaatatgcgacttta 343  Q
    |||||| |||||||||||| |||||| | ||||||| || ||| || || | |||||||||||| | ||| || |||| ||||||||||| ||| |||||    
T  22143041 tattcagtacgcgactttaatcgaaactattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggcttta 22142942  T
Q  344 tttgaaattattcaatacgcgattttattcgaaattattcaatacacgacttta 397  Q
     |  ||||||| |||||| ||| |||| |||||||||||||||||  |||||||    
T  22142941 atcaaaattatgcaatacacgactttaatcgaaattattcaatacgtgacttta 22142888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 537 - 743
Target Start/End: Original strand, 13403930 - 13404137
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||||||  ||||| ||||| || |||||| || |  ||||||||||| |||||  |||||||| |||||| ||||||||||||||| | |||||| |||    
T  13403930 tcttcctcttcacacaagtctatcgggttgcccgctacagtccctggggcacctttttttggttgaggaccgaaatagcatgtcctctcgctcctcctca 13404029  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || |||||||||| ||||||||||||| ||||| |||||    |||||| |||  |  ||  || ||||||||||||||||||| ||||  ||||    
T  13404030 acctcgactgattgtacatcggcaccttcgaacccttcttttttttgaaaccataaaaaacaattccgtgccatgtcataggcgatttttctttgttctt 13404129  T
Q  736 ctcatcac 743  Q
    ||||||||    
T  13404130 ctcatcac 13404137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 20192637 - 20192550
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| ||||||||||| ||||||||||||||| || |||||||| |||||| ||||||||||| || |||||||  ||||||||||||    
T  20192637 gaacaataaaacttccaggtgaatgcttgagaattgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgta 20192550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 230 - 345
Target Start/End: Complemental strand, 20241664 - 20241549
Alignment:
Q  230 actttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattc 329  Q
    |||||| || ||||||||||||||||||||||| |||||||| ||||||||||  || || || | ||||| |||||||| ||| || |||| |||||||    
T  20241664 actttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgactttaatcgaaattattc 20241565  T
Q  330 aatatgcgactttatt 345  Q
    |||| | |||||||||    
T  20241564 aatacgtgactttatt 20241549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 230 - 345
Target Start/End: Complemental strand, 22135648 - 22135533
Alignment:
Q  230 actttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattc 329  Q
    |||||| || ||||||||||||||||||||||| |||||||| ||||||||||  || || || | ||||| |||||||| ||| || |||| |||||||    
T  22135648 actttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgactttaatcgaaattattc 22135549  T
Q  330 aatatgcgactttatt 345  Q
    |||| | |||||||||    
T  22135548 aatacgtgactttatt 22135533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 230 - 345
Target Start/End: Complemental strand, 22143001 - 22142886
Alignment:
Q  230 actttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattc 329  Q
    |||||| || ||||||||||||||||||||||| |||||||| ||||||||||  || || || | ||||| |||||||| ||| || |||| |||||||    
T  22143001 actttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgactttaatcgaaattattc 22142902  T
Q  330 aatatgcgactttatt 345  Q
    |||| | |||||||||    
T  22142901 aatacgtgactttatt 22142886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 555 - 636
Target Start/End: Complemental strand, 17464568 - 17464486
Alignment:
Q  555 tcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcag 636  Q
    |||||||||||||| ||  ||||||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||| ||||    
T  17464568 tcaattgggttgtcttcaacagtccctgggacacctgcttttggttgaggaccaaaataacatgtcctcccgctcctcctcag 17464486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 224 - 373
Target Start/End: Complemental strand, 20241697 - 20241548
Alignment:
Q  224 tacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgata 323  Q
    ||||| |||||| |||||| ||||||||| || |||||| || ||||| |||||||||| ||| || |||| |||||||||||| |  || || || | |    
T  20241697 tacgcgactttaatcgaaactattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaa 20241598  T
Q  324 ttattcaatatgcgactttatttgaaattattcaatacgcgattttattc 373  Q
    |||| |||||  |||||||| | |||||||||||||||| || |||||||    
T  20241597 ttatgcaatacacgactttaatcgaaattattcaatacgtgactttattc 20241548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 224 - 373
Target Start/End: Complemental strand, 22135681 - 22135532
Alignment:
Q  224 tacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgata 323  Q
    ||||| |||||| |||||| ||||||||| || |||||| || ||||| |||||||||| ||| || |||| |||||||||||| |  || || || | |    
T  22135681 tacgcgactttaatcgaaactattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaa 22135582  T
Q  324 ttattcaatatgcgactttatttgaaattattcaatacgcgattttattc 373  Q
    |||| |||||  |||||||| | |||||||||||||||| || |||||||    
T  22135581 ttatgcaatacacgactttaatcgaaattattcaatacgtgactttattc 22135532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 224 - 373
Target Start/End: Complemental strand, 22143034 - 22142885
Alignment:
Q  224 tacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgata 323  Q
    ||||| |||||| |||||| ||||||||| || |||||| || ||||| |||||||||| ||| || |||| |||||||||||| |  || || || | |    
T  22143034 tacgcgactttaatcgaaactattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaa 22142935  T
Q  324 ttattcaatatgcgactttatttgaaattattcaatacgcgattttattc 373  Q
    |||| |||||  |||||||| | |||||||||||||||| || |||||||    
T  22142934 ttatgcaatacacgactttaatcgaaattattcaatacgtgactttattc 22142885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 732 - 835
Target Start/End: Complemental strand, 17464443 - 17464339
Alignment:
Q  732 tcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaac-aaatcggtgatcaaaacctaaactaattctaa 830  Q
    ||||||||||||||| | |||| ||||||||||||  ||  ||||||| ||||||||||| || ||  |||||||||||||||||||||||||||  |||    
T  17464443 tcttctcatcacccttcattttgttcaactgaacatcactctgattctaagacatatctatatgaaggaaatcggtgatcaaaacctaaactaatcttaa 17464344  T
Q  831 caatt 835  Q
    |||||    
T  17464343 caatt 17464339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 537 - 672
Target Start/End: Complemental strand, 34802272 - 34802136
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||  |||||| |  |  ||||||||||| |||||  |||||||| ||||| |||||||||||||||||| |||||| |||    
T  34802272 tcttcctcgtcacacaagtcaaccgggttgcctgctacagtccctggggcaccttgttttggttgaggacaaaaatagcatgtcctcccgctcctcctca 34802173  T
Q  636 ggctagattgattgtacaccggcaccttcgaatcctt 672  Q
      || || |||||||||||||||||||| ||| ||||    
T  34802172 acctcgactgattgtacaccggcacctttgaaccctt 34802136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 325 - 424
Target Start/End: Complemental strand, 20241677 - 20241578
Alignment:
Q  325 tattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgacttta 424  Q
    |||||||||||| |||||| |  |||||||||||||||||| |||| ||||||||||||||||| || ||||||   ||||||| |||||  ||||||||    
T  20241677 tattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgacttta 20241578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 325 - 424
Target Start/End: Complemental strand, 22135661 - 22135562
Alignment:
Q  325 tattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgacttta 424  Q
    |||||||||||| |||||| |  |||||||||||||||||| |||| ||||||||||||||||| || ||||||   ||||||| |||||  ||||||||    
T  22135661 tattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgacttta 22135562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 325 - 424
Target Start/End: Complemental strand, 22143014 - 22142915
Alignment:
Q  325 tattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgacttta 424  Q
    |||||||||||| |||||| |  |||||||||||||||||| |||| ||||||||||||||||| || ||||||   ||||||| |||||  ||||||||    
T  22143014 tattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgacttta 22142915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 20241662 - 20241560
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaa 304  Q
    |||| ||||| ||||| ||||||| |||||| |||||||||||||||||||| ||||| || ||||| | |||||| | ||| || |||| |||||||||    
T  20241662 tttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgactttaatcgaaattattcaa 20241563  T
Q  305 tac 307  Q
    |||    
T  20241562 tac 20241560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 22135646 - 22135544
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaa 304  Q
    |||| ||||| ||||| ||||||| |||||| |||||||||||||||||||| ||||| || ||||| | |||||| | ||| || |||| |||||||||    
T  22135646 tttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgactttaatcgaaattattcaa 22135547  T
Q  305 tac 307  Q
    |||    
T  22135546 tac 22135544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 22142999 - 22142897
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaa 304  Q
    |||| ||||| ||||| ||||||| |||||| |||||||||||||||||||| ||||| || ||||| | |||||| | ||| || |||| |||||||||    
T  22142999 tttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggctttaatcaaaattatgcaatacacgactttaatcgaaattattcaa 22142900  T
Q  305 tac 307  Q
    |||    
T  22142899 tac 22142897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 516 - 664
Target Start/End: Complemental strand, 14486085 - 14485937
Alignment:
Q  516 acaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagc 614  Q
    |||||| |||||| ||||| |||||| | ||| | |||||||||| |||||||||||  | ||||| |||||||||||||||||| || ||||||||| |    
T  14486085 acaagtcattacatttaattatcttcttcgtcgcttaagtcaattaggttgtcctcgatattccctagggcacctgcttttggttgagaaccaaaataac 14485986  T
Q  615 atgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttc 664  Q
    | ||||| |  |||||| |||  || || ||||||||||| |||||||||    
T  14485985 aagtcct-ctgctcctcctcaacctggaatgattgtacactggcaccttc 14485937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 513 - 636
Target Start/End: Complemental strand, 11181933 - 11181810
Alignment:
Q  513 attacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaat 611  Q
    ||||||||| |||||| ||||| |||| | | ||| | |||||||||||||||||||||| || |||  | ||||||||||||||||| |||||||||||    
T  11181933 attacaagtcattaca-ttaattatctccttcgtcgcttaagtcaattgggttgtcctcgacaatcctagtggcacctgcttttggttgaggaccaaaat 11181835  T
Q  612 agcatgtcctccctctcctcgtcag 636  Q
    | |||||| | || |||||| ||||    
T  11181834 aacatgtcattccgctcctcctcag 11181810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 20241704 - 20241600
Alignment:
Q  325 tattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgacttta 424  Q
    |||||| || ||||||||| | |||| ||||||||| || | |||| || |||||||||||||| |||||||||  |||||||||||||| ||| |||||    
T  20241704 tattcagtacgcgactttaatcgaaactattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggcttta 20241605  T
Q  425 ttcaa 429  Q
     ||||    
T  20241604 atcaa 20241600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 22135688 - 22135584
Alignment:
Q  325 tattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgacttta 424  Q
    |||||| || ||||||||| | |||| ||||||||| || | |||| || |||||||||||||| |||||||||  |||||||||||||| ||| |||||    
T  22135688 tattcagtacgcgactttaatcgaaactattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggcttta 22135589  T
Q  425 ttcaa 429  Q
     ||||    
T  22135588 atcaa 22135584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 22143041 - 22142937
Alignment:
Q  325 tattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgacttta 424  Q
    |||||| || ||||||||| | |||| ||||||||| || | |||| || |||||||||||||| |||||||||  |||||||||||||| ||| |||||    
T  22143041 tattcagtacgcgactttaatcgaaactattcaatatgccactttaatcaaaattattcaatacgcgactttaatcgaaattattcaatacgcggcttta 22142942  T
Q  425 ttcaa 429  Q
     ||||    
T  22142941 atcaa 22142937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 14482713 - 14482799
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| |||||||||||||||||||| ||| |||| || |||||| |||||| || ||| |||| |||||||| || ||||||||||||    
T  14482713 gaacaataaaacttccgggtgaatgtttgggagtgtt-gtttagcaagtttgaaattacccaaattcagaggcaagacaattgttgta 14482799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 537 - 679
Target Start/End: Complemental strand, 32691798 - 32691655
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  32691798 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 32691699  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
      ||  | | ||||||||| | |||||||||| ||||| |||||    
T  32691698 acctcaagtaattgtacactgacaccttcgaacccttctttttt 32691655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 21864192 - 21864106
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatatt 291  Q
    ||||||| |||||||| ||||| |||||||| |  || ||||||||||||| |||||| |||||| | |||| ||||||||| ||||    
T  21864192 tttattcgaatttattcaatacacaactttaataaaatttattcaatacgcaactttaatcgaaactattcagtacgcaactttatt 21864106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 23911537 - 23911579
Alignment:
Q  195 taatgtaacttttattcaaatttatttaatacgcaactttatt 237  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  23911537 taatgtaacttttattcgaatttattcaatacgcaactttatt 23911579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 12397757 - 12397816
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattatt 382  Q
    ||||||||| | ||||||||| | |||||||||||| ||||||||||| | |||||||||    
T  12397757 attattcaaaacgcgactttaatcgaaattattcaaaacgcgattttagttgaaattatt 12397816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 21864194 - 21864079
Alignment:
Q  338 actttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccac 437  Q
    |||||||| ||| ||||||||||| | | |||| |  || ||||||||||| | |||||||  |||| |||||| || || |||||||| ||  |||||     
T  21864194 actttattcgaatttattcaatacacaactttaataaaatttattcaatacgcaactttaatcgaaactattcagtacgcaactttatttaaaataccaa 21864095  T
Q  438 aatgtaaaccaaaatg 453  Q
    ||||||||||||||||    
T  21864094 aatgtaaaccaaaatg 21864079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 21864197 - 21864106
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatatt 318  Q
    ||||||||||||||| ||||||||||| | |||||| |  || || |||||||||||||| || |||| | |||||| ||| ||||| ||||    
T  21864197 gcaactttattcgaatttattcaatacacaactttaataaaatttattcaatacgcaactttaatcgaaactattcagtacgcaactttatt 21864106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 23911615 - 23911654
Alignment:
Q  214 atttatttaatacgcaactttattcgaaattattcaatac 253  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  23911615 atttttttaatacgcaactttattcgaatttattcaatac 23911654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 34134969 - 34134883
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| ||||||||| |||||||||||||| ||  | |||||||| |||||| || |||| | | ||||||||||| ||||||||||||    
T  34134969 gaacaataaaactttcgggtgaatgcttgggaactgttgtttagcaagtttgaa-ttattccatttcagaggtaagacaattgttgta 34134883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 631
Target Start/End: Complemental strand, 35020343 - 35020249
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctc 631  Q
    ||||||| |||||| |||||||| |||||| || |  |||||||| ||||||||  |||||||| |||||| ||||| ||||||||||| ||||||    
T  35020343 tcttcctcgtcacacaagtcaatcgggttg-ccactacagtccctagggcaccttgttttggttgaggaccgaaataacatgtcctcccgctcctc 35020249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 107; Significance: 4e-53; HSPs: 3)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 523 - 824
Target Start/End: Original strand, 1442 - 1751
Alignment:
Q  523 attacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcct 621  Q
    |||||| | |||||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||| ||||   ||||||||||| |     
T  1442 attacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgacagtccctgaggcaccttcttttggttgaggatagaaatagcatgttca 1541  T
Q  622 ccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgat 721  Q
    ||| |||||| |||  || |||||||| ||||||||||||||| ||||||||  |||||||||||||||| |  |  ||| || ||||||||||||||||    
T  1542 cccgctcctcctcaacctcgattgattatacaccggcaccttcaaatccttctattttacagaaccatcacaaacaatttcgtgccatgtcataggcgat 1641  T
Q  722 tttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattct------gagacatatctacat-aaacaaatcggtgatcaaaa 814  Q
    ||| ||||| | |||||||||||||| ||||| ||||||||||    ||| |||||||      ||||||||||||||| ||| |||| || ||||||||    
T  1642 ttttctttcttgttctcatcaccctcatttttgttcaactgaatgttaccctgattcttattcggagacatatctacataaaaaaaattggcgatcaaaa 1741  T
Q  815 cctaaactaa 824  Q
    ||||||||||    
T  1742 cctaaactaa 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 403 - 475
Target Start/End: Original strand, 1322 - 1394
Alignment:
Q  403 aattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatgtaccaaaatacgcacggcatat 475  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||  ||||||||||||||| ||| || |||||    
T  1322 aattattcaatatgcgactttattcaaagtaccaaaatgtcaagaaaaatgtaccaaaatgcgcgcgacatat 1394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 1303 - 1346
Alignment:
Q  222 aatacgcaactttattcgaaattattcaatacgcgactttattc 265  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||    
T  1303 aatacgcaacttcattcgtaattattcaatatgcgactttattc 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 6e-52; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 7484615 - 7484297
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  ||||| |||||||||||||| |||||| ||||||||||| ||||||||||||| | ||    
T  7484615 caattagatattacaatccattacattcaatcatcttcctcatcacacaagtcaattgggttatcctcgacagtccctggggcacctgcttttggctgag 7484516  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| ||||||||||||| ||| |||| || || |||||| ||  | || |    
T  7484515 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatcgttctttttgacggatccatcacatgtgattct 7484416  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| ||| ||||| ||||| |||| || ||||||||   ||| || ||||||| |||    || | |||||||||||||||||||||||||    
T  7484415 gtgccatgtcatcggcaatttttctttcttcttgtcgtcaccctccttcttcttgttcaactcaacgtttcccttattctgagacatatctacataaaca 7484316  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||| ||||||||||||    
T  7484315 aatcggcgatcaaaaccta 7484297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 4723211 - 4722898
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggcacctgcttttggttcagg 603  Q
    |||||||| |||||||   |||||| ||||||||||||||  ||||| ||||||||||||||||||||| ||| |   |||| ||||||||||| | |||    
T  4723211 caattagatattacaacccattacatttaatcatcttcctcatcaca-aagtcaattgggttgtcctcgacagccttggggcgcctgcttttggctgagg 4723113  T
Q  604 accaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttg 703  Q
    ||||||||||||||||||||| |||||| |||  || || ||||| |||||| ||||||| ||||||||| |||| | ||| |||||| ||  | || ||    
T  4723112 accaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcacctttgaatccttctttttgatagatccatcacatgtgattatg 4723013  T
Q  704 taccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgagacatatctacataaacaaatc 803  Q
    | | ||||||| ||||| ||| ||||| |||| || |||||||||||||| ||||||| ||     || ||||||||||||||||||| |||||||||||    
T  4723012 tgctatgtcatcggcgaattttctttcttcttgtcgtcaccctcctttttgttcaactcaatgtttccctgattctgagacatatctaaataaacaaatc 4722913  T
Q  804 ggtgatcaaaaccta 818  Q
    || ||||||||||||    
T  4722912 ggcgatcaaaaccta 4722898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 56 - 255
Target Start/End: Original strand, 18921354 - 18921563
Alignment:
Q  56 ataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgtaccacatatctctacccg 155  Q
    ||||||||||| |||||||||||||||| | |||||||| | |||| ||||| ||||| ||||||||||| ||| |||||| ||||||||||||||||||    
T  18921354 ataaaacttccaggtgaatgcttgagagctgttgtttagcaggtttgaatttgtccaatttcagaggtaagacagttgttgcaccacatatctctacccg 18921453  T
Q  156 aatttaatgtaatgataggacatatttaggaacttt----------atttaatgtaacttttattcaaatttatttaatacgcaactttattcgaaatta 245  Q
     || ||||||||||||||||||||||||||||||||          || ||||||||||||||||| ||||||||||||| ||||||||||||||| |||    
T  18921454 gatgtaatgtaatgataggacatatttaggaactttatgtaatgtaatgtaatgtaacttttattcgaatttatttaatatgcaactttattcgaattta 18921553  T
Q  246 ttcaatacgc 255  Q
    || |||||||    
T  18921554 tttaatacgc 18921563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 6792569 - 6792251
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||| ||||||| | |||| | | ||||||||| ||  ||||| ||||||||||||||||||||| |||||||| ||||| |||||||||| | ||    
T  6792569 caattagatattacaactcattagattcaatcatcttgctcatcacacaagtcaattgggttgtcctcgacagtccctagggcatctgcttttggctgag 6792470  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| ||||||||||||||||| |||| || || |||||| ||  | || |    
T  6792469 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttctttttgacggatccatcacatgtgattct 6792370  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| || |||||| ||||| | || |  ||||||||   ||| || |||||||  ||    || ||||||| |||||||||||||||||||    
T  6792369 gtgccatgtcatcggtgatttttctttctttttgttgtcaccctccttcttcttgttcaactcgacgtttccctgattctaagacatatctacataaaca 6792270  T
Q  800 aatcggtgatcaaaaccta 818  Q
    |||||| ||||||||||||    
T  6792269 aatcggcgatcaaaaccta 6792251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 545 - 818
Target Start/End: Original strand, 1695936 - 1696213
Alignment:
Q  545 gtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagat 643  Q
    |||||| |||||||| |||||||||||| |||||| |||| ||||||||||||| | ||| |||||||||||||||||||| |||||| |||  || ||     
T  1695936 gtcacacaagtcaatcgggttgtcctcgacagtccttggggcacctgcttttggctgagggccaaaatagcatgtcctcccgctcctcctcaacctcgaa 1696035  T
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcac 743  Q
    | ||| ||||||  |||||||||||||||| |||| || || |||||| ||  | ||  || ||||||||| | ||||||| ||||| |||| || ||||    
T  1696036 tcattatacaccaacaccttcgaatccttctttttgacggatccatcacatgtgattacgtgccatgtcatcgacgatttttctttcttcttgtcgtcac 1696135  T
Q  744 cctccttt---ttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||||||   || ||||||| |||    || |||||||||||||||||||||||||||||| || ||||||||||||    
T  1696136 cctcctttctgttgttcaactcaacgtttccctgattctgagacatatctacataaacaaattggcgatcaaaaccta 1696213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 537 - 746
Target Start/End: Original strand, 3602461 - 3602670
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcag 636  Q
    ||||||| |||||| |||||||| || |||||| |  ||||||||||||||||  |||||||| |||||||||||||||||||||||| |||||| |||     
T  3602461 tcttcctcgtcacacaagtcaatcggattgtccgctacagtccctgggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaa 3602560  T
Q  637 gctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttc 736  Q
     || || ||||||||||||| |||||||||| ||||| ||||| | ||||||||| |  |  ||| || ||||||| ||||||||||| ||||  |||||    
T  3602561 cctggactgattgtacaccgccaccttcgaacccttctttttttcggaaccatcacaaacaatttcgtgccatgtcgtaggcgatttttctttgttcttc 3602660  T
Q  737 tcatcaccct 746  Q
    ||||||||||    
T  3602661 tcatcaccct 3602670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 504 - 739
Target Start/End: Original strand, 7400798 - 7401033
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcag 602  Q
    |||||||||||||||||  |||| | | |||||||||||| |||||| ||||||||||||||||||||| |||||| || |||||||| |||||||| ||    
T  7400798 caattagacattacaagccattatattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgacagtccttgaggcacctgattttggttgag 7400897  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||| ||||| |||||||| || |||||| |||| || || || ||||| |||||||| |||||||| ||  |||| || ||||||| | ||||| || |    
T  7400898 gaccgaaataacatgtccttccgctcctcctcagcctggaatggttgtaaaccggcactttcgaatcatt-tttttaacggaaccattacattcgattct 7400996  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctca 739  Q
    || |||||||| || |||||| |||||| ||||||||    
T  7400997 gtgccatgtcacagtcgatttagctttcttcttctca 7401033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 684 - 835
Target Start/End: Complemental strand, 13130340 - 13130188
Alignment:
Q  684 aaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctgaga 783  Q
    |||||||| ||||| |||||| |||||||| | | |||||||||||| |||||||||||||||| ||||| |||||||| |||  ||| |||||||||||    
T  13130340 aaccatcacattcgattttgtgccatgtcacacgggattttgctttcttcttctcatcaccctcatttttgttcaactgcacatcaccctgattctgaga 13130241  T
Q  784 catatctac-ataaacaaatcggtgatcaaaacctaaactaattctaacaatt 835  Q
    ||||||||| | ||  ||||||||||||||||||||||||||| |||||||||    
T  13130240 catatctacaacaaggaaatcggtgatcaaaacctaaactaatcctaacaatt 13130188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 545 - 812
Target Start/End: Complemental strand, 36349384 - 36349114
Alignment:
Q  545 gtcacataagtcaattgggttgtcctcgccagtccctgg-gcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagat 643  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||||||||||| | |||||||||| ||||||||||||| ||| || |||  || ||     
T  36349384 gtcacataagtcaatcgggttgtcctcgacagtccctggagcacctgcttttggctgaggaccaaaa-agcatgtcctcccgctcttcctcaacctcgaa 36349286  T
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcac 743  Q
    ||||| |||||| ||||||||  ||||||| |||| || || ||| || ||  | ||| || ||||||||| ||||||||| ||||| || | || | ||    
T  36349285 tgattatacaccagcaccttcagatccttctttttgacggatccaccacatgtgatttcgtgccatgtcatcggcgatttttctttcttcctgtcgtgac 36349186  T
Q  744 cctccttt---ttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaa 812  Q
    ||||||||   || ||||||| |||    || |||||||||||||||||||||||||||||| || ||||||    
T  36349185 cctcctttctgttgttcaactcaacgtttccctgattctgagacatatctacataaacaaattggcgatcaa 36349114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 504 - 691
Target Start/End: Original strand, 1972464 - 1972652
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||| ||  ||||| ||||||||||| ||||||||| ||||||||||| |||||||||||| || ||    
T  1972464 caattagatattacaacccattacattcaatcatctttctaatcacacaagtcaattggtttgtcctcgacagtccctggggcacctgcttttgcttgag 1972563  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatca 691  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| ||||||||||||| ||  ||||||| || ||||||    
T  1972564 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatcattattttttacggatccatca 1972652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 537 - 746
Target Start/End: Original strand, 18309379 - 18309590
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| ||  |||| |||||| || |  |||||||| ||||||||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  18309379 tcttcctcgtcacacaatgcaatcgggttgcccgctacagtcccttgggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 18309478  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttc-ctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatct 734  Q
      || || |||||||||||||||||||||||| |||||  ||||| | ||||||||| |  |  || |||  |||||||||||||||||| ||||  |||    
T  18309479 acctggactgattgtacaccggcaccttcgaacccttcttttttttcggaaccatcacaaacaattatgtgtcatgtcataggcgatttttctttgttct 18309578  T
Q  735 tctcatcaccct 746  Q
    ||||||||||||    
T  18309579 tctcatcaccct 18309590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 504 - 609
Target Start/End: Complemental strand, 8531405 - 8531299
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||| ||| | |||||| |||||| ||||||||||| ||    
T  8531405 caattagacattactagtcattacatttaatcatcttcctcgtcacataagtcaattgggttgtcgtcgacggtccctagggcacttgcttttggttgag 8531306  T
Q  603 gaccaaa 609  Q
    |||||||    
T  8531305 gaccaaa 8531299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 509 - 636
Target Start/End: Original strand, 31239097 - 31239225
Alignment:
Q  509 agacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggacca 607  Q
    ||||| ||||||  |||||| ||||||| |||| | ||| |||||||||||||||||||||||  |||||||| |||||| ||||||||||| |||||||    
T  31239097 agacaatacaagccattacatttaatcagcttcttagtctcataagtcaattgggttgtcctccacagtccctagggcacgtgcttttggttgaggacca 31239196  T
Q  608 aaatagcatgtcctccctctcctcgtcag 636  Q
    |||||||||||||| || |||||| ||||    
T  31239197 aaatagcatgtccttccactcctcctcag 31239225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 537 - 672
Target Start/End: Original strand, 20199459 - 20199595
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |  ||||||||||| ||| |  |||||||| |||||||||||||||||||||||| |||||| |||    
T  20199459 tcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcactttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 20199558  T
Q  636 ggctagattgattgtacaccggcaccttcgaatcctt 672  Q
      || || ||||||||||||| |||||||||||||||    
T  20199559 acctggactgattgtacaccgacaccttcgaatcctt 20199595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 540 - 746
Target Start/End: Original strand, 25499203 - 25499410
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggc 638  Q
    |||| |||||| |||||||| |||||| || |  |||||| |||| |||||  |||||||| ||||||||||||| |||||||||| |||||| ||   |    
T  25499203 tcctcgtcacacaagtcaatcgggttgcccgctacagtccttggggcaccttgttttggttgaggaccaaaatagtatgtcctcccgctcctcctccacc 25499302  T
Q  639 tagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctc 738  Q
    | || |||||||||||||||||||||||| ||||| ||||| | ||||||||| |  |  || | | |||||||||| || ||||| ||||  |||||||    
T  25499303 tggactgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaattctatgccatgtcataagcaatttttctttgttcttctc 25499402  T
Q  739 atcaccct 746  Q
    ||||||||    
T  25499403 atcaccct 25499410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 592 - 690
Target Start/End: Complemental strand, 6384 - 6286
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  6384 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttcagaaccatc 6286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 19035885 - 19035731
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || || ||||| |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  19035885 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 19035786  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  19035785 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatc 19035731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 227 - 413
Target Start/End: Original strand, 31238789 - 31238974
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatatta 326  Q
    |||||| |||||||| |||||||||| || ||||||  |||| || |||||||| ||||| |||||||  ||||||||||  ||||| || ||||| |||    
T  31238789 gcaactatattcgaa-ttattcaatatgcaactttaaacgaatttcttcaatacacaactttattcgaatttattcaatatgcaactttaatcgatttta 31238887  T
Q  327 ttcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaat 413  Q
    ||||||| || |||||| | ||| ||||| |||||   | |||||||||| ||||||||||||| |||||||  ||| |||||||||    
T  31238888 ttcaatacgcaactttaatcgaatttatttaatacaaaaatttattcgaatttattcaatacacaactttaatagaatttattcaat 31238974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 536 - 746
Target Start/End: Original strand, 35566389 - 35566600
Alignment:
Q  536 atcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtc 634  Q
    |||||||| |||||| |||||||| |||||| || |  ||||||||| |||||||  |||||||| |||||||||||||||||||||| | |||| | ||    
T  35566389 atcttcctcgtcacacaagtcaatcgggttggccgctacagtccctgaggcaccttgttttggttgaggaccaaaatagcatgtcctcacgctccgcctc 35566488  T
Q  635 aggctagattgattgtacaccggcaccttcgaatccttccttt-ttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatc 733  Q
    |  || || || |||||||| |||||||||||| | ||  ||| || | ||||||||| |  |  |||||| ||||||||||||||||||| ||||  ||    
T  35566489 aacctcgactggttgtacactggcaccttcgaaccttttttttctttcggaaccatcacaaacaattttgtgccatgtcataggcgatttt-ctttgttc 35566587  T
Q  734 ttctcatcaccct 746  Q
    |||||||||||||    
T  35566588 ttctcatcaccct 35566600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 537 - 672
Target Start/End: Complemental strand, 35927168 - 35927034
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| ||| |||| ||||| ||| ||| |||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||||| |||    
T  35927168 tcttcctggtcacacaagccaatcgggtt-tcc-cgctagtccctggggcaccttcttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 35927071  T
Q  636 ggctagattgattgtacaccggcaccttcgaatcctt 672  Q
      || || |||||||||| ||||||||||||| ||||    
T  35927070 acctcgactgattgtacatcggcaccttcgaaccctt 35927034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 537 - 679
Target Start/End: Complemental strand, 34683017 - 34682874
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggca-cctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| | |||| || |  ||||||||||| | |||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  34683017 tcttcctcgtcacacaagtcaatcgagttgcccgctacagtccctggggaaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 34682918  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
      || || ||||||||||||| |||||||||| ||||| |||||    
T  34682917 acctcgactgattgtacaccgtcaccttcgaacccttctttttt 34682874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 773 - 835
Target Start/End: Original strand, 23190377 - 23190439
Alignment:
Q  773 tgattctgagacatatctacataaacaaatcggtgatcaaaacctaaactaattctaacaatt 835  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23190377 tgattctaagacaaatctacataaacaaatcggtgatcaaaacctaaactaatactaacaatt 23190439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 530 - 664
Target Start/End: Original strand, 10978403 - 10978538
Alignment:
Q  530 ttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctc 628  Q
    ||||| |||| ||| |||||| || |||||||||||||||||| |||| ||| ||| |||||||||||||| |||||||||||| || ||||| || |||    
T  10978403 ttaattatctccctcgtcacaaaattcaattgggttgtcctcgtcagttcctggggaacctgcttttggttgaggaccaaaataacaagtccttccgctc 10978502  T
Q  629 ctcgtcaggctagattgattgtacaccggcaccttc 664  Q
    ||| |||   |  | |||||||||||||||||||||    
T  10978503 ctcctcatcatgtaatgattgtacaccggcaccttc 10978538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 592 - 679
Target Start/End: Original strand, 11347856 - 11347943
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||  || || |||||||||||||||||||||||| ||||| |||||    
T  11347856 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttt 11347943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 592 - 690
Target Start/End: Complemental strand, 27660531 - 27660433
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||  || || ||||||||||| |||||||||||| ||||| ||||| | ||||||||    
T  27660531 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatc 27660433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 216 - 467
Target Start/End: Original strand, 31238804 - 31239056
Alignment:
Q  216 ttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactat 315  Q
    ||||| |||| |||||||||  |||| || |||||||| | |||||||||||| || ||||||| |||||| || ||||| ||||||||||| ||||| |    
T  31238804 ttattcaatatgcaactttaaacgaatttcttcaatacacaactttattcgaatttattcaatatgcaactttaatcgattttattcaatacgcaacttt 31238903  T
Q  316 attcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattc----aatacacgactttaaaggaaattattca 411  Q
    | ||||  ||||| ||||    | |||||| ||| ||||||||||| | | |||| | ||| ||||||    ||||||| |||||||  ||| ||||||     
T  31238904 aatcgaatttatttaatacaaaaatttattcgaatttattcaatacacaactttaatagaatttattcaattaatacacaactttaatcgaatttattc- 31239002  T
Q  412 atatgcgactttattcaatgtaccacaatgtaaaccaaaatgtaccaaaatacgca 467  Q
      | |  ||||||||||| |||| | |||||||||||||||| |||||||| ||||    
T  31239003 --acggaactttattcaaagtactaaaatgtaaaccaaaatgcaccaaaatgcgca 31239056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 537 - 679
Target Start/End: Complemental strand, 1399391 - 1399248
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||  ||||||| | |  || |||||||| |||||  ||||| || |||| ||||||||||||||||||| |||||| |||    
T  1399391 tcttcctcgtcacacaagtcaaccgggttgttcgctacaatccctggggcaccttgttttgattgaggatcaaaatagcatgtcctcccgctcctcctca 1399292  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
      ||||| | |||||||||||||||||| ||| ||||| |||||    
T  1399291 acctagactaattgtacaccggcacctttgaacccttctttttt 1399248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 2599566 - 2599483
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgt 134  Q
    |||| |||||||||  ||||||| ||||||||| | |||||||| |||||| ||||||||||| ||||||||||| ||||||||    
T  2599566 gaacaataaaacttttgggtgaacgcttgagagctgttgtttagcaagtttgaatttatccaatttcagaggtaagacaattgt 2599483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 537 - 690
Target Start/End: Original strand, 11028447 - 11028601
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||||||||||| |||||| |||    
T  11028447 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 11028546  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || ||||||||||| ||||||||| || | ||| ||||| | ||||||||    
T  11028547 acctcgagtgattgtacactggcaccttcaaaccattctttttttcggaaccatc 11028601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 213 - 359
Target Start/End: Original strand, 31238828 - 31238974
Alignment:
Q  213 aatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaac 312  Q
    ||||| || ||||| |||||||||||||| |||||||||| || |||||| ||||  || |||||||||||||| || ||||  ||||| |||||| ||     
T  31238828 aatttcttcaatacacaactttattcgaatttattcaatatgcaactttaatcgattttattcaatacgcaactttaatcgaatttatttaatacaaaaa 31238927  T
Q  313 tatattcgatattattcaatatgcgactttatttgaaattattcaat 359  Q
    | |||||||  ||||||||||  | |||||| | ||| |||||||||    
T  31238928 tttattcgaatttattcaatacacaactttaatagaatttattcaat 31238974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 592 - 673
Target Start/End: Original strand, 8539032 - 8539113
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttc 673  Q
    |||||||| |||||| ||||||||||||||||  |||||| |||  || || |||||||||||||||||||||||| |||||    
T  8539032 ttttggttgaggaccgaaatagcatgtcctcctgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 8539113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 537 - 689
Target Start/End: Original strand, 30710599 - 30710752
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctgg-gcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || |||||||| |||||| |  |||||||||  | ||||  |||||||  |||||| ||||| ||||||||| | |||||| |||    
T  30710599 tcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcagtaccttgttttggtcgaggaccgaaataacatgtcctctcgctcctcctca 30710698  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccat 689  Q
      || || ||||||||||| |||||||||||| ||||| ||||| |||||||||    
T  30710699 acctcgagtgattgtacactggcaccttcgaacccttctttttttcagaaccat 30710752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 592 - 672
Target Start/End: Complemental strand, 8575295 - 8575215
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatcctt 672  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||  || || ||||||||||| |||||||||||| ||||    
T  8575295 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaaccctt 8575215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 31238847 - 31238955
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaa 304  Q
    ||||||| |||||||| |||| ||||||||| ||||  ||||||||||||| |||||| ||||| || || |||||  || | |||||||  ||||||||    
T  31238847 tttattcgaatttattcaatatgcaactttaatcgattttattcaatacgcaactttaatcgaatttatttaatacaaaaatttattcgaatttattcaa 31238946  T
Q  305 tacacaact 313  Q
    |||||||||    
T  31238947 tacacaact 31238955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 292
Target Start/End: Complemental strand, 8531552 - 8531465
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattc 292  Q
    ||||||| ||||||||||||| ||||||||| ||  | ||||||||||||| |||||| |||||||| |||||||  ||||| |||||    
T  8531552 tttattcgaatttatttaatatgcaactttaatcagatttattcaatacgcaactttaatcgaaattattcaatatacaactttattc 8531465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 17195252 - 17195339
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| |||||||||| ||||||||||||||||||| |||||||  | |||| |  |||||||| |||| |||||| ||||||||||||    
T  17195252 gaacaataaaacttctgggtgaatgcttgagagttgttgtttaataggtttgaccttatccaatttcaaaggtaagacaattgttgta 17195339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 537 - 667
Target Start/End: Original strand, 38855154 - 38855285
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||| ||||||||||| |||||| |||    
T  38855154 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaataacatgtcctcccgctcctcctca 38855253  T
Q  636 ggctagattgattgtacaccggcaccttcgaa 667  Q
      || || ||||||||||| ||||||||||||    
T  38855254 acctcgagtgattgtacactggcaccttcgaa 38855285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 12743152 - 12743222
Alignment:
Q  68 ggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||||||||||||||||| |||||||| |||||| |||||| |  | ||||||||||| ||||||||||||    
T  12743152 ggtgaatgcttgagagttgttgtttagcaagtttgaatttaccacatttcagaggtaagacaattgttgta 12743222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 1972337 - 1972446
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||| | |||||| |||| |||||||||||| | |  ||| |||||  |||||||||||| |||||| ||||||||| ||||||  |||| || ||    
T  1972337 aattattcgaaacgcgactttaatcgaaattattccaaatgcgattttaattgaaattattcaaaatgcgaatttattcaaagtaccaatatgtcaagca 1972436  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  1972437 aaatgtacca 1972446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 530 - 622
Target Start/End: Complemental strand, 13130475 - 13130382
Alignment:
Q  530 ttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctc 622  Q
    |||||||||| ||| ||| | ||  ||||||| |||||||||| ||||||||||  ||||||||||||||| ||||| |||||| |||||||||    
T  13130475 ttaatcatctccctcgtcgcttatctcaattgtgttgtcctcgacagtccctggcacacctgcttttggttgaggacaaaaataacatgtcctc 13130382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 8531557 - 8531465
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattc 319  Q
    ||||||||||||||| ||||| |||| || |||||| ||  | || |||||||||||||| || |||| ||||||||||| |||||| |||||    
T  8531557 gcaactttattcgaatttatttaatatgcaactttaatcagatttattcaatacgcaactttaatcgaaattattcaatatacaactttattc 8531465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 292
Target Start/End: Complemental strand, 36311211 - 36311124
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattc 292  Q
    |||||||||||||||| ||||||||||||||||| || ||||| || | || | |||  ||||| || |||||||||||||| |||||    
T  36311211 tttattcaaatttattaaatacgcaactttattcaaatttatttaagatgcaaattttatcgaatttattcaatacgcaactttattc 36311124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 10398539 - 10398585
Alignment:
Q  195 taatgtaacttttattcaaatttatttaatacgcaactttattcgaa 241  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  10398539 taatgtaacttttattcgaatttattcaatacacaactttattcgaa 10398585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 12805970 - 12806040
Alignment:
Q  68 ggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||||||||||||||| | |||||||| |||||| |||||| |  | ||||||||||| ||||||||||||    
T  12805970 ggtgaatgcttgagagctgttgtttagcaagtttgaatttaccacatttcagaggtaagacaattgttgta 12806040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 644 - 746
Target Start/End: Complemental strand, 41202382 - 41202280
Alignment:
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcac 743  Q
    |||||||||||||||||||||||| | ||  ||||| | ||||||||| |  |  || ||| ||||||||||| ||||||| ||||  ||||||||||||    
T  41202382 tgattgtacaccggcaccttcgaaccattttttttttcggaaccatcacaaacaattatgtgccatgtcatagccgatttttctttgttcttctcatcac 41202283  T
Q  744 cct 746  Q
    |||    
T  41202282 cct 41202280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 1695760 - 1695869
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| || ||| |||| |||||||||||||| || ||| |||||  |||||||||||| | |  | ||||||||| ||||||  |||| || ||    
T  1695760 aattattcaaaacacgactttaatcgaaattattcaaaacgcgattttaattgaaattattcaaaacgaaaatttattcaaagtaccaatatgtcaagca 1695859  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  1695860 aaatgtacca 1695869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 6792709 - 6792600
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||| | |||||| |||| |||||||||||| | |  ||| |||||  |||||||||||| | |||| ||||||||| ||||||  |||| || ||    
T  6792709 aattattcgaaacgcgactttaatcgaaattattccaaatgcgattttaattgaaattattcaaaacgcgaatttattcaaagtaccaatatgtcaagca 6792610  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  6792609 aaatgtacca 6792600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 36349568 - 36349463
Alignment:
Q  351 ttattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaa 450  Q
    |||||||| ||| || |||| ||||||||| |||| |||||| |||||  |||||||||||| | |||| |||||||||  |||||  |||| || ||||    
T  36349568 ttattcaaaacgtgactttaatcgaaattactcaaaacacgattttaattgaaattattcaaaacgcgaatttattcaaactaccaatatgtcaagcaaa 36349469  T
Q  451 atgtac 456  Q
    ||||||    
T  36349468 atgtac 36349463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 8531514 - 8531450
Alignment:
Q  378 ttattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgt 442  Q
    ||||||||||| | |||||||  ||||||||||||||| | ||||||||||| |||||| |||||    
T  8531514 ttattcaatacgcaactttaatcgaaattattcaatatacaactttattcaaagtaccaaaatgt 8531450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 10398254 - 10398325
Alignment:
Q  66 cgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||||||||||||||||| | |||||||| |||||| |||||| || | ||||| ||||| ||||||||||||    
T  10398254 cgggtgaatgcttgagagatgttgtttagcaagtttgaatttacccca-ttcaggggtaagacaattgttgta 10398325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 818
Target Start/End: Original strand, 1972739 - 1972782
Alignment:
Q  775 attctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||    
T  1972739 attcttagacatatctacataaataaatcggcgatcaaaaccta 1972782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 424
Target Start/End: Original strand, 31238790 - 31238904
Alignment:
Q  309 caactatattcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattat 408  Q
    ||||||||||||| |||||||||||||| ||||||   ||| || |||||||| | | |||||||||| ||||||||||  | |||||||  ||  ||||    
T  31238790 caactatattcga-attattcaatatgcaactttaaacgaatttcttcaatacacaactttattcgaatttattcaatatgcaactttaatcgattttat 31238888  T
Q  409 tcaatatgcgacttta 424  Q
    |||||| || ||||||    
T  31238889 tcaatacgcaacttta 31238904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 1695761 - 1695823
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaa 385  Q
    ||||||||| |  |||||||| | |||||||||||| ||||||||||| | ||||||||||||    
T  1695761 attattcaaaacacgactttaatcgaaattattcaaaacgcgattttaattgaaattattcaa 1695823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 773 - 824
Target Start/End: Complemental strand, 35926939 - 35926886
Alignment:
Q  773 tgattctgagacatatctacat--aaacaaatcggtgatcaaaacctaaactaa 824  Q
    ||||||||||||||||||||||  ||| |||| || ||||||||||||||||||    
T  35926939 tgattctgagacatatctacataaaaaaaaattggcgatcaaaacctaaactaa 35926886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 36311228 - 36311178
Alignment:
Q  215 tttatttaatacgcaactttattcgaaattattcaatacgcgactttattc 265  Q
    |||||| ||||||||||||||||| || ||||| ||||||| |||||||||    
T  36311228 tttattaaatacgcaactttattcaaatttattaaatacgcaactttattc 36311178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 33371649 - 33371682
Alignment:
Q  204 ttttattcaaatttatttaatacgcaactttatt 237  Q
    ||||||||||||||||| ||||||||||||||||    
T  33371649 ttttattcaaatttattcaatacgcaactttatt 33371682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 2e-48; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 504 - 816
Target Start/End: Original strand, 26487543 - 26487859
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| | ||||||||||||  | ||| ||||||||||||||||| | | ||||||||||| ||||||||||||| | ||    
T  26487543 caattagatattacaacccattacattcaatcatcttcctcatgacacaagtcaattgggttgtcattgacagtccctggggcacctgcttttggctgag 26487642  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || || ||||| |||||| ||||||||||||| ||| |||| || || |||||| ||  | ||      
T  26487643 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatcattctttttgacggatccatcacatgtgattcc 26487742  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| ||||||||| ||||| |||| || ||||||||   ||| || ||||||| |||    || |||||||||||||||||||||||||||    
T  26487743 gtgccatgtcatcggcgatttttctttcttcttgtcgtcaccctccttcttcttgttcaactcaacgtttccctgattctgagacatatctacataaaca 26487842  T
Q  800 aatcggtgatcaaaacc 816  Q
    |||||| ||||||||||    
T  26487843 aatcggcgatcaaaacc 26487859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 504 - 818
Target Start/End: Complemental strand, 42168059 - 42167742
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| ||||||| | |||||| | ||||||||||||  ||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||| | ||    
T  42168059 caattagatattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccccggggcacctgcttttggctgag 42167960  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggtttt 702  Q
    |||||||||||||||||||||| |||||| |||  || ||  |||| |||||| |||||| |||||||||| |||| || || |||||| ||  | ||      
T  42167959 gaccaaaatagcatgtcctcccgctcctcctcaaccttgaacgattatacaccagcacctacgaatccttctttttgacggatccatcacatgtgattcc 42167860  T
Q  703 gtaccatgtcataggcgattttgctttcatcttctcatcaccctc---ctttttattcaactgaacacaaccttgattctgagacatatctacataaaca 799  Q
    || ||||||||| ||||||||| ||||| |||| || ||||||||   ||| || ||||||| |||    || ||||||||||||||||||||| |||||    
T  42167859 gtgccatgtcatcggcgatttttctttcttcttgtcgtcaccctccttcttcttgttcaactcaacgtttccctgattctgagacatatctaca-aaaca 42167761  T
Q  800 aatcggtgatcaaaaccta 818  Q
    | |||| ||||||||||||    
T  42167760 actcggcgatcaaaaccta 42167742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 582 - 793
Target Start/End: Original strand, 10205589 - 10205794
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttac 681  Q
    |||||||||||||||| |||||||||||||| || ||||| || |||||| || | ||||| |||||||||||||||||||||||||   |  |||||||    
T  10205589 gggcacctgcttttgggtcaggaccaaaataacaagtccttccgctcctcctcggcctagaatgattgtacaccggcaccttcgaattgcttttttttac 10205688  T
Q  682 agaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctga 781  Q
     ||||||||| ||||| |||||| |||||||| || ||||||||||||| |||||   |||| ||| |||   ||||||||| ||  ||||||||||| |    
T  10205689 ggaaccatcacattcgattttgtgccatgtcagagtcgattttgctttcttcttc---tcacactcattt---ttcaactgagcatcaccttgattctta 10205782  T
Q  782 gacatatctaca 793  Q
    ||||||||||||    
T  10205783 gacatatctaca 10205794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 504 - 678
Target Start/End: Complemental strand, 38033027 - 38032852
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcag 602  Q
    |||||||| |||||||   |||||| ||||||||||||||  ||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||| | ||    
T  38033027 caattagatattacaacccattacatttaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccccgggacacctgcttttggctgag 38032928  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttt 678  Q
    |||||||||||||||||||||| |||||| | |  || || ||||| |||||| ||||||||||||| ||| ||||    
T  38032927 gaccaaaatagcatgtcctcccgctcctccttaacctcgaatgattatacaccagcaccttcgaatcattcttttt 38032852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 160 - 349
Target Start/End: Complemental strand, 31171458 - 31171262
Alignment:
Q  160 taatgtaatgataggacatattt-aggaactttatttaa------tgtaacttttattcaaatttatttaatacgcaactttattcgaaattattcaata 252  Q
    |||||||||||||| |||||||| ||||||||||| |||      |||||||||||||| ||||||||||||| ||||||||| || |||||||||||||    
T  31171458 taatgtaatgatagaacatattttaggaactttatgtaaatgtaatgtaacttttattcgaatttatttaatatgcaactttaatcaaaattattcaata 31171359  T
Q  253 cgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattcaatatgcgactttatttgaa 349  Q
    |||||||||| |||| |||  | ||||||| |||||| | || |||||||||||| | ||| || | ||  |||||||||| |||||||||||||||    
T  31171358 cgcgactttaatcgagattacttaatacgcgactataattgaaattattcaatacgcgactttaattgaatttattcaatacgcgactttatttgaa 31171262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 41856087 - 41855877
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    |||||||||||||| || ||||| |||||| || |  ||||||||||| |||||  |||||||| || ||||||||||||||||||||| |||||| |||    
T  41856087 tcttccttgtcacacaaatcaatcgggttgcccgctacagtccctggggcaccttgttttggttaagaaccaaaatagcatgtcctcccgctcctcctca 41855988  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || || |||||||||||||||||||||||| ||||| ||||| | ||||||||| |  |  || ||| ||| |||||||| |||||| ||||  ||||    
T  41855987 acctcgagtgattgtacaccggcaccttcgaacccttctttttttcggaaccatcacaaacaattctgtgccacgtcataggtgatttttctttgttctt 41855888  T
Q  736 ctcatcaccct 746  Q
    |||||||||||    
T  41855887 ctcatcaccct 41855877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 537 - 746
Target Start/End: Complemental strand, 18439388 - 18439178
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||  || |  | |||||| ||||||||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  18439388 tcttcctcgtcacaaaagtcaatcgggtttcccacaactgtccctagggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 18439289  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatctt 735  Q
      || ||||||||||||| |||||||||| || ||||| ||||| | ||||||||| |  |  ||  ||  |||||||||||||||||| ||||  ||||    
T  18439288 acctggattgattgtacatcggcaccttcaaacccttctttttttcggaaccatcacaaacaattacgtgtcatgtcataggcgatttttctttgttctt 18439189  T
Q  736 ctcatcaccct 746  Q
    |||||||||||    
T  18439188 ctcatcaccct 18439178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 540 - 746
Target Start/End: Original strand, 41276188 - 41276395
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggc 638  Q
    |||| |||||| |||||||| |||||  || |  ||||||||| |||||||  |||||||| |||||||||||||||||||||||| |||||| |||  |    
T  41276188 tcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacc 41276287  T
Q  639 tagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctc 738  Q
    | || ||||| |||||||||||||||||| ||||| ||||| | ||||||||  |  |  ||  || ||| ||||||||||||||| ||||  |||||||    
T  41276288 tcgagtgattatacaccggcaccttcgaacccttctttttttcggaaccatcgcaaacaattccgtgccacgtcataggcgatttttctttgttcttctc 41276387  T
Q  739 atcaccct 746  Q
    ||||||||    
T  41276388 atcaccct 41276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 537 - 672
Target Start/End: Original strand, 28167913 - 28168049
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |  ||||||||||| |||||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  28167913 tcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 28168012  T
Q  636 ggctagattgattgtacaccggcaccttcgaatcctt 672  Q
      || || ||||||||||||| |||||||||| ||||    
T  28168013 acctcgactgattgtacaccgacaccttcgaaccctt 28168049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 537 - 679
Target Start/End: Complemental strand, 484463 - 484320
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||||||||||||||||||||| |||||| |||    
T  484463 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 484364  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
      || || |||||||||||||||||||||||| ||||| |||||    
T  484363 acctcgagtgattgtacaccggcaccttcgaacccttctttttt 484320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 545 - 818
Target Start/End: Complemental strand, 19241739 - 19241462
Alignment:
Q  545 gtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagat 643  Q
    |||||| |||||||| |||||||||| | |||||||| ||||| |||||||||| | ||||| ||||||| |||||||||| |||||| |||  || ||     
T  19241739 gtcacacaagtcaatcgggttgtccttgacagtccctggggcaactgcttttgggtgaggacaaaaatagtatgtcctcccgctcctcctcacccttgaa 19241640  T
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcac 743  Q
    ||||| | ||||  |||||| ||||| ||| |||| || || |||| | ||  | ||| || ||||||||| | ||||||| ||||| |||| || ||||    
T  19241639 tgattattcaccaacacctttgaatcattctttttgacggatccatgacatgtgatttcgtgccatgtcatcgacgatttttctttcttcttgtcgtcac 19241540  T
Q  744 cctccttt---ttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||||||   || ||||||| |||    |  |||||||||||||||||| |||| |||||| || ||||||||||||    
T  19241539 cctcctttctgttgttcaactcaacgtttctctgattctgagacatatctgcatatacaaattggcgatcaaaaccta 19241462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 545 - 818
Target Start/End: Complemental strand, 19314923 - 19314646
Alignment:
Q  545 gtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagat 643  Q
    |||||| |||||||| |||||||||| | |||||||| ||||| |||||||||| | ||||| ||||||| |||||||||| |||||| |||  || ||     
T  19314923 gtcacacaagtcaatcgggttgtccttgacagtccctggggcaactgcttttgggtgaggacaaaaatagtatgtcctcccgctcctcctcacccttgaa 19314824  T
Q  644 tgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcac 743  Q
    ||||| | ||||  |||||| ||||| ||| |||| || || |||| | ||  | ||| || ||||||||| | ||||||| ||||| |||| || ||||    
T  19314823 tgattattcaccaacacctttgaatcattctttttgacggatccatgacatgtgatttcgtgccatgtcatcgacgatttttctttcttcttgtcgtcac 19314724  T
Q  744 cctccttt---ttattcaactgaacacaaccttgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||||||   || ||||||| |||    |  |||||||||||||||||| |||| |||||| || ||||||||||||    
T  19314723 cctcctttctgttgttcaactcaacgtttctctgattctgagacatatctgcatatacaaattggcgatcaaaaccta 19314646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 583 - 746
Target Start/End: Original strand, 24862503 - 24862666
Alignment:
Q  583 ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttaca 682  Q
    |||||||  |||||||| |||||||||||||||||||||||| |||||| |||  || || |||||||| ||| ||||||||||| ||||| ||||| |     
T  24862503 ggcaccttgttttggttgaggaccaaaatagcatgtcctcccactcctcctcaacctcgagtgattgtataccagcaccttcgaacccttctttttttcg 24862602  T
Q  683 gaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
    ||||||||  |  |  || ||| ||| ||||||||||||||| ||||  |||||||||||||||    
T  24862603 gaaccatcgcaaacaattatgtgccacgtcataggcgatttttctttgttcttctcatcaccct 24862666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 232 - 372
Target Start/End: Complemental strand, 31171406 - 31171266
Alignment:
Q  232 tttattcgaaattattcaatacgcgactttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattcaa 331  Q
    |||||||||| ||||| |||| || |||||| || ||||| |||||||||| ||| || |||| |||| | ||||| | |||||| | || |||||||||    
T  31171406 tttattcgaatttatttaatatgcaactttaatcaaaattattcaatacgcgactttaatcgagattacttaatacgcgactataattgaaattattcaa 31171307  T
Q  332 tatgcgactttatttgaaattattcaatacgcgattttatt 372  Q
    || ||||||||| ||||| ||||||||||||||| ||||||    
T  31171306 tacgcgactttaattgaatttattcaatacgcgactttatt 31171266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 323 - 453
Target Start/End: Complemental strand, 31171369 - 31171239
Alignment:
Q  323 attattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactt 422  Q
    ||||||||||| ||||||||| | || |||| | ||||||||| | || | ||||||||||||||| |||||||||  ||| |||||||||| |||||||    
T  31171369 attattcaatacgcgactttaatcgagattacttaatacgcgactataattgaaattattcaatacgcgactttaattgaatttattcaatacgcgactt 31171270  T
Q  423 tattcaatgtaccacaatgtaaaccaaaatg 453  Q
    ||||  | |||||| ||||||||| ||||||    
T  31171269 tatttgaagtaccaaaatgtaaactaaaatg 31171239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 15031530 - 15031376
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || ||||  |||||||| |||||| ||||||||| ||||||| |||||| |||    
T  15031530 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatatcctcccgctcctcctca 15031431  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || ||||||||||| |||||||||||| ||||| ||||| | ||||||||    
T  15031430 acctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatc 15031376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 259 - 397
Target Start/End: Complemental strand, 31171406 - 31171268
Alignment:
Q  259 tttattcgaaattgttcaatacgcaactatattcgatattattcaatacacaactatattcgatattattcaatatgcgactttatttgaaattattcaa 358  Q
    |||||||||| || || |||| |||||| || || | |||||||||||| | ||| || |||| |||| | |||| |||||| || ||||||||||||||    
T  31171406 tttattcgaatttatttaatatgcaactttaatcaaaattattcaatacgcgactttaatcgagattacttaatacgcgactataattgaaattattcaa 31171307  T
Q  359 tacgcgattttattcgaaattattcaatacacgacttta 397  Q
    ||||||| |||| | ||| ||||||||||| ||||||||    
T  31171306 tacgcgactttaattgaatttattcaatacgcgacttta 31171268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 537 - 666
Target Start/End: Original strand, 42604561 - 42604691
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| |||||| || |   |||||||||| |||||  |||||||| |||| | ||||||||||||||||| |||||| |||    
T  42604561 tcttcctcgtcacacaagtcaatcgggttgcccactggagtccctggggcaccttgttttggttgaggatcgaaatagcatgtcctcccgctcctcctca 42604660  T
Q  636 ggctagattgattgtacaccggcaccttcga 666  Q
      || || |||||||||||||||||||||||    
T  42604661 acctcgagtgattgtacaccggcaccttcga 42604691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 592 - 746
Target Start/End: Complemental strand, 41017003 - 41016849
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatca 691  Q
    |||||||| |||||| ||||||||||||||||  ||| || |||  || |  |||||||||||||||||||||||| ||||| ||||| | |||||||      
T  41017003 ttttggttgaggaccgaaatagcatgtcctcctgctcatcctcaacctcgtgtgattgtacaccggcaccttcgaacccttctttttttcggaaccattg 41016904  T
Q  692 aattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
     |  |  ||  || ||||||||||||||||||| ||||  |||||||||||||||    
T  41016903 caaacaattacgtgccatgtcataggcgatttttctttgttcttctcatcaccct 41016849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 315 - 424
Target Start/End: Complemental strand, 31171404 - 31171295
Alignment:
Q  315 tattcgatattattcaatatgcgactttatttgaaattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaata 414  Q
    |||||||  ||||| ||||||| |||||| |  |||||||||||||||||| |||| |||| |||| | ||||| ||||| |||  ||||||||||||||    
T  31171404 tattcgaatttatttaatatgcaactttaatcaaaattattcaatacgcgactttaatcgagattacttaatacgcgactataattgaaattattcaata 31171305  T
Q  415 tgcgacttta 424  Q
     |||||||||    
T  31171304 cgcgacttta 31171295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 591 - 679
Target Start/End: Original strand, 44051597 - 44051685
Alignment:
Q  591 cttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttccttttt 679  Q
    |||||| || |||||||||||||||||||||||| |||||  |||  || || ||||||||||||||||| |||||| ||||| |||||    
T  44051597 cttttgattgaggaccaaaatagcatgtcctcccgctccttctcaacctcgagtgattgtacaccggcactttcgaacccttctttttt 44051685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 504 - 663
Target Start/End: Complemental strand, 24629166 - 24629009
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||||||||||||  |||||| ||||||||||  ||||||| |||||||||||  ||||||||   | || ||| ||| |||||||||||||| ||    
T  24629166 caattagacattacaagccattacatttaatcatctcacttgtcatataagtcaattaagttgtcct---ctgttcctggggaacctgcttttggttgag 24629070  T
Q  603 gaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcacctt 663  Q
    || | ||||| || |||||  | |||||| ||||  | || |||||||||||| |||||||    
T  24629069 gatccaaataccaagtcctttccctcctcctcagcttggaatgattgtacaccagcacctt 24629009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 592 - 690
Target Start/End: Original strand, 45065843 - 45065941
Alignment:
Q  592 ttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
    |||||||| |||||| |||||||||||||| || ||||||  ||  || || ||||||||||| |||||||||||| ||||| ||||| | ||||||||    
T  45065843 ttttggttgaggaccgaaatagcatgtccttccgctcctccccaacctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatc 45065941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 583 - 746
Target Start/End: Original strand, 22550223 - 22550384
Alignment:
Q  583 ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggct-agattgattgtacaccggcaccttcgaatccttcctttttac 681  Q
    |||||||  |||||||| |||||||||||||||||||||||| |||||| |||  || |||  |||||||||||||||| ||| || |||| |||||| |    
T  22550223 ggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcaga--gattgtacaccggcacattcaaaccctt-cttttttc 22550319  T
Q  682 agaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctcatcaccct 746  Q
      |||||||  |  |  || ||| ||| ||||||||||||||| ||||  |||||||||||||||    
T  22550320 gtaaccatcgcaaacaattctgtgccacgtcataggcgatttttctttgttcttctcatcaccct 22550384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 26487416 - 26487525
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| |||||| |||| |||||||||||||| |  ||| |||||  ||||||||| || | || | ||||||||| ||||||  |||| || ||    
T  26487416 aattattcaaaacgcgactttaatcgaaattattcaaaatgcgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagca 26487515  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  26487516 aaatgtacca 26487525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 42168200 - 42168091
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||| | |||||| |||| |||||||||||| | |  ||| |||||  |||||||||||| | |||| ||||||||| ||||||  |||| || ||    
T  42168200 aattattcgaaacgcgactttaatcgaaattattccaaatgcgattttaattgaaattattcaaaacgcgaatttattcaaagtaccaatatgtcaaaca 42168101  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  42168100 aaatgtacca 42168091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 26140993 - 26141041
Alignment:
Q  204 ttttattcaaatttatttaatacgcaactttattcgaaattattcaata 252  Q
    |||||||| |||||||| ||||||||||||||||| || ||||||||||    
T  26140993 ttttattcgaatttattcaatacgcaactttattcaaatttattcaata 26141041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 509 - 612
Target Start/End: Original strand, 27784459 - 27784563
Alignment:
Q  509 agacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggacca 607  Q
    |||||||| |||  |||||| |||||||| | |||  ||||||||||||||||||||||  ||  |||| ||| |||||||||||||||| |  ||||||    
T  27784459 agacattataagccattacatttaatcatttccctcatcacataagtcaattgggttgttatcaacagttcctggggcacctgcttttggctgtggacca 27784558  T
Q  608 aaata 612  Q
    |||||    
T  27784559 aaata 27784563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 31171706 - 31171792
Alignment:
Q  51 gaacgataaaacttccgggtgaatgcttgagagtttttgtttagaaagttttaatttatccaacttcagaggtaaaacaattgttgta 138  Q
    |||| ||| |||||||||||||||||||||||  | |||||||  |||||| || |||||  | ||||||||||| ||||||||||||    
T  31171706 gaacaatagaacttccgggtgaatgcttgagaactgttgtttaacaagtttgaa-ttatctcatttcagaggtaagacaattgttgta 31171792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 667
Target Start/End: Original strand, 40703471 - 40703602
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctggg-cacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| |||||||| ||||||  | |  ||||||||||| |||||  |||||||| |||| | |||||||||||||||   |||||| |||    
T  40703471 tcttcctcgtcacacaagtcaatcgggttgcacactacagtccctggggcaccttgttttggttgaggatcgaaatagcatgtcctcttgctcctcctca 40703570  T
Q  636 ggctagattgattgtacaccggcaccttcgaa 667  Q
      ||  | ||||||||||||| ||||||||||    
T  40703571 acctctagtgattgtacaccgacaccttcgaa 40703602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 10205420 - 10205453
Alignment:
Q  205 tttattcaaatttatttaatacgcaactttattc 238  Q
    |||||||||||||||| |||||||||||||||||    
T  10205420 tttattcaaatttattcaatacgcaactttattc 10205453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 12504235 - 12504194
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaa 268  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
T  12504235 gcaactttattcgaatttattcaatacacaactttattcgaa 12504194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 19241901 - 19241792
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| || ||| || | || ||||||||||| |||||| |||||  |||||||||||| |  ||| ||||||||| |||| |  |||| || ||    
T  19241901 aattattcaaaacccgacttcaatcaaaattattcaaaacacgattttaattgaaattattcaaaacacgaatttattcaaagtacaaatatgtcaagca 19241802  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  19241801 aaatgtacca 19241792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 19315085 - 19314976
Alignment:
Q  349 aattattcaatacgcgattttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaacca 448  Q
    |||||||||| || ||| || | || ||||||||||| |||||| |||||  |||||||||||| |  ||| ||||||||| |||| |  |||| || ||    
T  19315085 aattattcaaaacccgacttcaatcaaaattattcaaaacacgattttaattgaaattattcaaaacacgaatttattcaaagtacaaatatgtcaagca 19314986  T
Q  449 aaatgtacca 458  Q
    ||||||||||    
T  19314985 aaatgtacca 19314976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 773 - 818
Target Start/End: Complemental strand, 38032784 - 38032739
Alignment:
Q  773 tgattctgagacatatctacataaacaaatcggtgatcaaaaccta 818  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||    
T  38032784 tgattttgagacatatctacataaacaactcgacgatcaaaaccta 38032739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 69; Significance: 2e-30; HSPs: 3)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 504 - 631
Target Start/End: Original strand, 9577 - 9705
Alignment:
Q  504 caattagacattacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcag 602  Q
    |||||||||||||||||  |||||| ||||||||||||||  |||||||||||||||||||||||||||  ||||||| |||||| || |||||||| ||    
T  9577 caattagacattacaagccattacatttaatcatcttcctcttcacataagtcaattgggttgtcctcgatagtccctagggcacatgattttggttgag 9676  T
Q  603 gaccaaaatagcatgtcctccctctcctc 631  Q
    |||||||||| |||||||| || ||||||    
T  9677 gaccaaaataacatgtccttccgctcctc 9705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 9447 - 9547
Alignment:
Q  367 tttattcgaaattattcaatacacgactttaaaggaaattattcaatatgcgactttattcaatgtaccacaatgtaaaccaaaatgtaccaaaatacgc 466  Q
    ||||||||||  |||||||||| |  ||||||  ||||||||||||||    ||||||||||| ||||   ||||||||||||||||||||||||| |||    
T  9447 tttattcgaatctattcaatacgcagctttaatcgaaattattcaatacataactttattcaaagtacacaaatgtaaaccaaaatgtaccaaaatgcgc 9546  T
Q  467 a 467  Q
    |    
T  9547 a 9547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 9442 - 9495
Alignment:
Q  227 gcaactttattcgaaattattcaatacgcgactttattcgaaattgttcaatac 280  Q
    |||||||||||||||  ||||||||||||  ||||| |||||||| ||||||||    
T  9442 gcaactttattcgaatctattcaatacgcagctttaatcgaaattattcaatac 9495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 532 - 631
Target Start/End: Original strand, 5415 - 5515
Alignment:
Q  532 aatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccct-gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcct 630  Q
    ||||||||||||  ||||| ||||||||||||||||||||| |||||||| ||||||||| |||||| | |||||||||||||||||||||||| |||||    
T  5415 aatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctggttttggctgaggaccaaaatagcatgtcctcccactcct 5514  T
Q  631 c 631  Q
    |    
T  5515 c 5515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 513 - 781
Target Start/End: Complemental strand, 1726 - 1461
Alignment:
Q  513 attacaagtgattacacttaatcatcttccttgtcacataagtcaattgggttgtcctcgccagtccctgggc-acctgcttttggttcaggaccaaaat 611  Q
    ||||||||  |||||| |||||||| | ||| ||| | |||| |||||||||||| |||  |||||||||||| |||||||||| ||| ||||| |||||    
T  1726 attacaagctattacatttaatcatgtccctcgtcgcttaaggcaattgggttgtactcaacagtccctgggccacctgcttttagttgaggactaaaat 1627  T
Q  612 agcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcgaat--ccttcctttttacagaaccatcaaattcggttttgtaccat 709  Q
    | || ||||| || |||||| |||| || || |||||||||| ||||||||||||||  | ||  ||||||||||||||||| ||||| ||  || ||||    
T  1626 aacaagtccttccgctcctcctcagtctggactgattgtacatcggcaccttcgaattgcttttttttttacagaaccatcacattcgattccgtgccat 1527  T
Q  710 gtcataggcgattttgctttcatcttctcatcaccctcctttttattcaactgaacacaaccttgattctga 781  Q
    || | |  | ||||||||||| |||||   |||| |||||||   ||||||||||||  |||||||||||||    
T  1526 gtaacattcaattttgctttcttcttc---tcacactccttt---ttcaactgaacatcaccttgattctga 1461  T

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Target: scaffold0176 (Bit Score: 60; Significance: 5e-25; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 540 - 746
Target Start/End: Original strand, 2899 - 3106
Alignment:
Q  540 tccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggc 638  Q
    |||| |||||| |||||||| |||||  || |  ||||||||| |||||||  |||||||| ||||||||||||||||||| |||| |||||| |||  |    
T  2899 tcctcgtcacacaagtcaatcgggtttcccgctacagtccctgtggcaccttgttttggttgaggaccaaaatagcatgtcatcccgctcctcctcaacc 2998  T
Q  639 tagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatcaaattcggttttgtaccatgtcataggcgattttgctttcatcttctc 738  Q
    | || ||||||||| |||||||||||||| ||||| ||||| | ||||||||  |  |  ||| || ||| ||||||||||||||| ||||  |||||||    
T  2999 tcgagtgattgtactccggcaccttcgaacccttctttttttcggaaccatcgcaaacaatttcgtgccacgtcataggcgatttttctttgttcttctc 3098  T
Q  739 atcaccct 746  Q
    ||||||||    
T  3099 atcaccct 3106  T

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Target: scaffold0494 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 690
Target Start/End: Complemental strand, 5931 - 5777
Alignment:
Q  537 tcttccttgtcacataagtcaattgggttgtcctcgccagtccctg-ggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtca 635  Q
    ||||||| |||||| || ||||| || |||||| |  ||||||||| || |||| ||||||||| |||||| ||||||||||||||||| |||||| |||    
T  5931 tcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttcttttggttgaggacctaaatagcatgtcctcccgctcctcctca 5832  T
Q  636 ggctagattgattgtacaccggcaccttcgaatccttcctttttacagaaccatc 690  Q
      || || ||||||||||| |||||||||||| ||||| ||||| | ||||||||    
T  5831 acctcgagtgattgtacactggcaccttcgaacccttctttttttcggaaccatc 5777  T

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Target: scaffold0618 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 582 - 665
Target Start/End: Complemental strand, 4602 - 4519
Alignment:
Q  582 gggcacctgcttttggttcaggaccaaaatagcatgtcctccctctcctcgtcaggctagattgattgtacaccggcaccttcg 665  Q
    ||||||||  |||| ||| |||||| ||||||||||||||||| || ||| |||  || || ||||||||||||||||||||||    
T  4602 gggcaccttgtttttgttgaggaccgaaatagcatgtcctcccgctgctcctcaacctggactgattgtacaccggcaccttcg 4519  T

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