View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5500-Insertion-2 (Length: 1019)

Name: NF5500-Insertion-2
Description: NF5500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5500-Insertion-2
NF5500-Insertion-2
[»] chr2 (10 HSPs)
chr2 (421-975)||(43465855-43466410)
chr2 (60-358)||(43465475-43465792)
chr2 (60-127)||(7932760-7932827)
chr2 (60-127)||(2949059-2949126)
chr2 (58-120)||(16561035-16561097)
chr2 (60-127)||(10459283-10459350)
chr2 (60-127)||(38935389-38935456)
chr2 (62-116)||(43042194-43042248)
chr2 (86-127)||(43398890-43398931)
chr2 (67-116)||(44726815-44726864)
[»] chr8 (2 HSPs)
chr8 (572-930)||(4494106-4494461)
chr8 (60-116)||(13209992-13210048)
[»] scaffold0097 (1 HSPs)
scaffold0097 (67-129)||(37926-37988)
[»] chr6 (5 HSPs)
chr6 (60-127)||(9829908-9829975)
chr6 (60-127)||(31323831-31323898)
chr6 (62-128)||(2282414-2282480)
chr6 (70-116)||(14446724-14446770)
chr6 (61-126)||(28004650-28004715)
[»] chr7 (1 HSPs)
chr7 (58-127)||(18732014-18732083)
[»] chr1 (1 HSPs)
chr1 (59-126)||(37918939-37919006)
[»] chr5 (4 HSPs)
chr5 (70-127)||(9956534-9956591)
chr5 (67-127)||(42324913-42324973)
chr5 (60-118)||(3549583-3549641)
chr5 (59-116)||(35585341-35585398)
[»] chr3 (1 HSPs)
chr3 (58-127)||(32221494-32221563)
[»] chr4 (3 HSPs)
chr4 (58-127)||(30848614-30848685)
chr4 (66-115)||(3249714-3249763)
chr4 (58-127)||(24980649-24980718)


Alignment Details
Target: chr2 (Bit Score: 494; Significance: 0; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 494; E-Value: 0
Query Start/End: Original strand, 421 - 975
Target Start/End: Original strand, 43465855 - 43466410
Alignment:
Q  421 tctacttgatcataattgtaaattgtgcaagtcagaaataagtagaacccnnnnnnnn--tgactttaatattattgacagtgttccttatagtattaaa 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||    
T  43465855 tctacttgatcataattgtaaattgtgcaagtcagaaataagtagaacccaaaaaaaaaatgactttaatattattgacagtgttccttatagtattaaa 43465954  T
Q  519 atttttgaggaaaattatgaatcaaatagactttgaatgagaaattcataagaaaacttacttatcaattctgtttctgaacttgctaagatacttttga 618  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43465955 aattttgaggaaaattatgaatcaaatagactttgaatgagaaattcataagaaaacttacttatcaattctgtttctgaacttgctaagatacttttga 43466054  T
Q  619 ttatcttcttcagcaaccttaaagattttgtcaataaattgttgtctttcattgacatctaatttcctaacatcaacttctctatgttgcactttgtttg 718  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43466055 ttatcttcttcagcaaccttaaagattttgtcaataaattgttgtctttcattgacatctaatttcctaacatcaacttctctatgttgcactttgtttg 43466154  T
Q  719 gatgatcttgatcaccatattcttctgcatatgtttgaagtatacttgttcttagtctatcataagtaggcaatttctctattgcagcccatttgagagc 818  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43466155 gatgatcttgatcaccatattcttctgcatatgtttgaagtatacttgttcttagtctatcataagtaggcaatttctctatggcagcccatttgagagc 43466254  T
Q  819 ttcttcatcttcatcaagattagaagtccttcttgaatatcttccactagcaaacactccctccattctccaacttgacctgcttaaactcctacttatg 918  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43466255 ttcttcatcttcatcaagattagaagtccttcttgaatatcttccactagcaaacactccctccattctccaacttgacctgcttaaactcctacttatg 43466354  T
Q  919 cttctacttaaactcccttccaatttttgtttcctcttaattaaatcttctacaaag 975  Q
    ||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||    
T  43466355 cttctacttaaactcccttcc-atttttgtttctccttaattaattcttctacaaag 43466410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 60 - 358
Target Start/End: Original strand, 43465475 - 43465792
Alignment:
Q  60 tcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttttaattagattatttctcaaatgaaggattcta 159  Q
    |||| ||| ||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  43465475 tcaataaatattgatgtatctgacataaattttgaacaaaatacattaacttttgttaactaattttttaactagactatttctcaaatgaaggattcta 43465574  T
Q  160 aaaattaaatttgagattatttttcgagaaagagtcatgttgttaactcttcgaacaccatcatgttaaat------------------ttaatttgatg 241  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |                  ||| |||||||    
T  43465575 aaaattaaatttaagattatttttcgagaaagagtcatgttggtaactcttccaacaccatcatgttaatttgttttctactaatagtattattttgatg 43465674  T
Q  242 tttgcttgcaaaggaatgatgacaaaggcatacgattag-atatatatttcaacaccaaaaccggacggcatttagcttgccgaccgcaaagtcaaatgc 340  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43465675 tttgcttgcaaaggaatgatgacaaaggcatacgattagtatatatatttcaacaccaaaaccggacggcatttagcttgccgaccgcaaagtcaaatgc 43465774  T
Q  341 gtctagaaaatagcattc 358  Q
    ||||||||||||||||||    
T  43465775 gtctagaaaatagcattc 43465792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 7932827 - 7932760
Alignment:
Q  60 tcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    |||||| || |||||||||||||| |||||||| ||| |||||| |||||||||||| ||||||||||    
T  7932827 tcaacataagttgatgtatctgatataaattttgaaccaaatacgttaacttttgttgactaattttt 7932760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 2949126 - 2949059
Alignment:
Q  60 tcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    |||||| |||||||||||| |||  | |||||| |||||||||||||| ||||||||||| |||||||    
T  2949126 tcaacataaattgatgtatatgacattaattttgaacaaaatacattagcttttgttaaccaattttt 2949059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 16561097 - 16561035
Alignment:
Q  58 gatcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaact 120  Q
    |||||||||| |||||| ||| || | ||||||||||||||||||||| ||||||| ||||||    
T  16561097 gatcaacaaagattgatttatttggtctaaattttaaacaaaatacatcaacttttattaact 16561035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 10459350 - 10459283
Alignment:
Q  60 tcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    |||||| || |||||| |||||||  ||||||| ||| ||||||||||||||||||| || |||||||    
T  10459350 tcaacataagttgatgcatctgatacaaattttgaaccaaatacattaacttttgttgaccaattttt 10459283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 38935389 - 38935456
Alignment:
Q  60 tcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    |||||| || ||||||||| ||||  | ||||| ||||||||||||||||||||||| | ||||||||    
T  38935389 tcaacataagttgatgtatttgatacagattttgaacaaaatacattaacttttgttgagtaattttt 38935456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 43042248 - 43042194
Alignment:
Q  62 aacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgtt 116  Q
    ||||||| |||||||||||||| |||||||| |||  |||||||||| |||||||    
T  43042248 aacaaaagttgatgtatctgatataaattttgaaccgaatacattaaattttgtt 43042194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 43398890 - 43398931
Alignment:
Q  86 aaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    ||||||| ||| |||||||||||||||||||||| |||||||    
T  43398890 aaattttgaaccaaatacattaacttttgttaacaaattttt 43398931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 44726815 - 44726864
Alignment:
Q  67 aaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgtt 116  Q
    |||||||| ||| |||| |||||||||||| ||||||||||| |||||||    
T  44726815 aaattgatatatttgatataaattttaaactaaatacattaatttttgtt 44726864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 4e-59; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 572 - 930
Target Start/End: Complemental strand, 4494461 - 4494106
Alignment:
Q  572 aaacttacttatcaattctgtttctgaacttgctaagatacttttgattatcttcttcagcaaccttaaagattttgtcaataaattgttgtctttcatt 671  Q
    ||||| |||| ||||||||||||||||| || ||||| ||||||| ||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  4494461 aaactcacttgtcaattctgtttctgaatttcctaaggtacttttcattatcttcttcagcaaccttgaaaattttgtcaataatttgttgtctttcatt 4494362  T
Q  672 gacatctaatttcctaacatcaacttctctatgttgcactttgttt---ggatgatcttgatcaccatattcttctgcatatgtttgaagtatacttgtt 768  Q
     | ||| |||||  |||||||||||||  | ||||||    |||||   || |||  ||||||||| |      | | | | ||||| |  |||||||||    
T  4494361 catatccaatttggtaacatcaacttccttgtgttgctgcctgtttcctggctgaggttgatcaccct------cagtaaaagtttgcataatacttgtt 4494268  T
Q  769 cttagtctatcataagtaggcaatttctctattgcagcccatttgagagcttcttcatcttcatcaagattagaagtccttcttgaatatcttccactag 868  Q
    ||||  |||||||| || || | |||||| |||||||||||||| ||||||||||||||||||||||  | |||||| ||||||||||||||||||||||    
T  4494267 cttaacctatcataggttggtagtttctcaattgcagcccatttaagagcttcttcatcttcatcaacttgagaagttcttcttgaatatcttccactag 4494168  T
Q  869 caaacactccctccattctccaacttgacctgcttaaactcctacttatgcttctacttaaa 930  Q
    |||||||| | |||||| ||||||||||||| || || || |||||||| ||||||||||||    
T  4494167 caaacacttcttccattttccaacttgacctactcaagcttctacttatacttctacttaaa 4494106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 13210048 - 13209992
Alignment:
Q  60 tcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgtt 116  Q
    |||||| || ||||||||||||||  ||||||| ||| |||||||||||||||||||    
T  13210048 tcaacataagttgatgtatctgatacaaattttgaaccaaatacattaacttttgtt 13209992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 37988 - 37926
Alignment:
Q  67 aaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaatttttta 129  Q
    |||||||||||| || | |||||||||||| ||||||||||||||||||| ||||||||||||    
T  37988 aaattgatgtatttggtataaattttaaaccaaatacattaacttttgttgactaatttttta 37926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 9829975 - 9829908
Alignment:
Q  60 tcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    |||||| |||||||||||| || |  ||||||||||||||||||||||| ||||||| ||||||||||    
T  9829975 tcaacataaattgatgtatttggtacaaattttaaacaaaatacattaatttttgttgactaattttt 9829908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 31323898 - 31323831
Alignment:
Q  60 tcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    |||||| || |||||||||||| |  ||||||| ||||||||||||||||||||||| || |||||||    
T  31323898 tcaacataagttgatgtatctggtacaaattttgaacaaaatacattaacttttgttgaccaattttt 31323831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 2282480 - 2282414
Alignment:
Q  62 aacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaatttttt 128  Q
    |||| |||||||||||| ||||  || |||| ||| ||||||||||||||||||| || ||||||||    
T  2282480 aacataaattgatgtatttgatacaatttttgaactaaatacattaacttttgttgaccaatttttt 2282414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 14446770 - 14446724
Alignment:
Q  70 ttgatgtatctgatgtaaattttaaacaaaatacattaacttttgtt 116  Q
    ||||||||||| || |||||||| ||||| |||||||||||||||||    
T  14446770 ttgatgtatctaatataaattttgaacaacatacattaacttttgtt 14446724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 28004650 - 28004715
Alignment:
Q  61 caacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaatttt 126  Q
    ||||||||||| |||||| || |  ||||||| | | ||||||||||||||||||| |||||||||    
T  28004650 caacaaaaattaatgtatttggtacaaattttgagccaaatacattaacttttgttgactaatttt 28004715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 18732014 - 18732083
Alignment:
Q  58 gatcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    |||||||| ||||||||||||||| | |||||||| ||| |||||||||||||||| || || |||||||    
T  18732014 gatcaacataaattgatgtatctggtataaattttgaaccaaatacattaacttttattgaccaattttt 18732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 37918939 - 37919006
Alignment:
Q  59 atcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaatttt 126  Q
    ||||||| || ||||||||| |||| |||||||||||| ||||||||| ||||||||| || ||||||    
T  37918939 atcaacataagttgatgtatttgatataaattttaaaccaaatacattcacttttgttgacaaatttt 37919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.000000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 9956534 - 9956591
Alignment:
Q  70 ttgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    |||||||||||| | |||||||| ||  |||||||||||||||||||||| |||||||    
T  9956534 ttgatgtatctgttataaattttgaatcaaatacattaacttttgttaaccaattttt 9956591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 42324913 - 42324973
Alignment:
Q  67 aaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    |||||||||||| || | |||||||||||  ||||||||||||||||||| || |||||||    
T  42324913 aaattgatgtatttggtataaattttaaaacaaatacattaacttttgttgaccaattttt 42324973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 3549641 - 3549583
Alignment:
Q  60 tcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaa 118  Q
    |||||||||||| ||||||||| | |||||||| |||  ||||||| ||||||||||||    
T  3549641 tcaacaaaaattaatgtatctggtctaaatttttaaccgaatacatcaacttttgttaa 3549583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 35585341 - 35585398
Alignment:
Q  59 atcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgtt 116  Q
    |||||||||||||||||||| |||| |||| ||||    |||||||||||||||||||    
T  35585341 atcaacaaaaattgatgtatttgatttaaagtttagtttaaatacattaacttttgtt 35585398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 32221494 - 32221563
Alignment:
Q  58 gatcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    ||||| || |||||||||||| || |  ||||||| ||| ||||||||||||||||||| ||||||||||    
T  32221494 gatcagcataaattgatgtatttggtacaaattttgaaccaaatacattaacttttgttgactaattttt 32221563  T

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Target: chr4 (Bit Score: 33; Significance: 0.000000006; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 30848614 - 30848685
Alignment:
Q  58 gatcaacaaaaattgatgtatctgatgta--aattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    |||||||| || ||||||||||| |||||  |||||| ||||||||||||||| ||||||| || |||||||    
T  30848614 gatcaacataagttgatgtatctaatgtacaaattttgaacaaaatacattaatttttgttgaccaattttt 30848685  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 3249763 - 3249714
Alignment:
Q  66 aaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgt 115  Q
    |||| ||||||||||| | |||||||| ||| ||||||||||||||||||    
T  3249763 aaaaatgatgtatctggtataaattttgaaccaaatacattaacttttgt 3249714  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 24980649 - 24980718
Alignment:
Q  58 gatcaacaaaaattgatgtatctgatgtaaattttaaacaaaatacattaacttttgttaactaattttt 127  Q
    |||||||| || |||||||||||||   |||||||  |||||||||||||| ||||||| || |||||||    
T  24980649 gatcaacataagttgatgtatctgacacaaattttgtacaaaatacattaatttttgttgacaaattttt 24980718  T

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