View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5502-Insertion-4 (Length: 947)

Name: NF5502-Insertion-4
Description: NF5502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5502-Insertion-4
NF5502-Insertion-4
[»] chr2 (46 HSPs)
chr2 (8-570)||(7716012-7716581)
chr2 (8-549)||(7723784-7724342)
chr2 (8-549)||(7729934-7730486)
chr2 (641-795)||(26068898-26069052)
chr2 (794-940)||(9787711-9787863)
chr2 (794-940)||(17368368-17368520)
chr2 (796-940)||(18537829-18537980)
chr2 (634-761)||(20126185-20126312)
chr2 (795-940)||(38716345-38716497)
chr2 (634-786)||(27848336-27848487)
chr2 (644-792)||(33076155-33076302)
chr2 (795-940)||(15735216-15735368)
chr2 (793-940)||(25298798-25298953)
chr2 (796-940)||(15700899-15701050)
chr2 (634-762)||(20127281-20127409)
chr2 (796-940)||(30714275-30714426)
chr2 (634-761)||(3453335-3453462)
chr2 (798-940)||(22191198-22191347)
chr2 (634-789)||(27849287-27849441)
chr2 (634-752)||(3454384-3454503)
chr2 (634-753)||(42702055-42702174)
chr2 (796-940)||(2986838-2986990)
chr2 (796-940)||(11176059-11176211)
chr2 (789-940)||(9051021-9051179)
chr2 (796-916)||(6763717-6763842)
chr2 (645-754)||(42700961-42701070)
chr2 (634-692)||(24607779-24607837)
chr2 (631-786)||(33075183-33075336)
chr2 (799-937)||(36464428-36464572)
chr2 (789-859)||(2986679-2986750)
chr2 (788-857)||(15735056-15735126)
chr2 (634-682)||(3627615-3627663)
chr2 (796-859)||(11175907-11175971)
chr2 (796-859)||(18538068-18538132)
chr2 (796-896)||(25884178-25884281)
chr2 (796-859)||(6763957-6764021)
chr2 (823-937)||(28365665-28365787)
chr2 (796-859)||(30714514-30714578)
chr2 (721-789)||(30793933-30794001)
chr2 (719-763)||(34387965-34388009)
chr2 (644-763)||(34386876-34386995)
chr2 (796-859)||(43301657-43301720)
chr2 (726-789)||(44702364-44702427)
chr2 (625-691)||(13830258-13830323)
chr2 (630-683)||(3628120-3628173)
chr2 (796-849)||(22191046-22191099)
[»] chr7 (74 HSPs)
chr7 (634-795)||(16957158-16957319)
chr7 (634-792)||(7314149-7314307)
chr7 (796-940)||(21224354-21224504)
chr7 (791-940)||(31494062-31494219)
chr7 (794-940)||(10655481-10655634)
chr7 (634-786)||(42337069-42337221)
chr7 (794-940)||(35337521-35337674)
chr7 (632-789)||(42338053-42338210)
chr7 (796-940)||(19195214-19195365)
chr7 (634-753)||(35960143-35960260)
chr7 (799-915)||(19493498-19493617)
chr7 (796-940)||(48175962-48176115)
chr7 (798-916)||(13577789-13577911)
chr7 (796-940)||(8526947-8527098)
chr7 (796-941)||(11843178-11843331)
chr7 (634-753)||(17353812-17353931)
chr7 (796-940)||(42271484-42271636)
chr7 (796-940)||(27869196-27869347)
chr7 (799-940)||(3562436-3562585)
chr7 (796-940)||(2331165-2331322)
chr7 (796-940)||(20636771-20636922)
chr7 (828-940)||(41452281-41452401)
chr7 (634-793)||(46469141-46469305)
chr7 (796-940)||(24597517-24597667)
chr7 (634-770)||(17352890-17353025)
chr7 (730-792)||(37627558-37627620)
chr7 (786-940)||(10023776-10023936)
chr7 (626-689)||(7313063-7313126)
chr7 (823-919)||(9822129-9822228)
chr7 (823-919)||(10724054-10724153)
chr7 (787-915)||(33237407-33237537)
chr7 (634-688)||(40319551-40319605)
chr7 (634-779)||(47507760-47507903)
chr7 (794-937)||(15681785-15681936)
chr7 (633-753)||(12385427-12385546)
chr7 (796-937)||(39182089-39182237)
chr7 (634-774)||(40659004-40659143)
chr7 (820-916)||(17305944-17306045)
chr7 (796-915)||(25002887-25003009)
chr7 (634-692)||(40322552-40322610)
chr7 (799-916)||(19919607-19919728)
chr7 (644-752)||(37628493-37628597)
chr7 (823-916)||(3403080-3403176)
chr7 (849-915)||(7365403-7365471)
chr7 (854-940)||(36746564-36746655)
chr7 (647-779)||(40659220-40659352)
chr7 (719-782)||(5450110-5450173)
chr7 (793-859)||(17305761-17305828)
chr7 (791-896)||(24448040-24448146)
chr7 (634-692)||(12384093-12384151)
chr7 (794-859)||(36746743-36746808)
chr7 (798-859)||(39181939-39182001)
chr7 (814-916)||(9157049-9157154)
chr7 (796-865)||(14624608-14624677)
chr7 (787-859)||(20636610-20636683)
chr7 (787-859)||(20638482-20638555)
chr7 (796-919)||(42303322-42303450)
chr7 (796-859)||(19919841-19919905)
chr7 (796-859)||(21690416-21690480)
chr7 (632-692)||(37918521-37918581)
chr7 (797-859)||(2331015-2331078)
chr7 (634-689)||(5490924-5490979)
chr7 (836-912)||(18754306-18754387)
chr7 (794-859)||(19195453-19195519)
chr7 (794-859)||(24597755-24597821)
chr7 (786-856)||(25002701-25002771)
chr7 (790-859)||(27869435-27869505)
chr7 (634-692)||(35959081-35959139)
chr7 (794-859)||(42271331-42271397)
chr7 (631-692)||(8955969-8956030)
chr7 (795-859)||(10655329-10655394)
chr7 (799-859)||(18754506-18754567)
chr7 (796-849)||(21224603-21224656)
chr7 (794-843)||(23080816-23080865)
[»] scaffold0008 (1 HSPs)
scaffold0008 (634-795)||(268411-268571)
[»] chr4 (74 HSPs)
chr4 (634-792)||(1961070-1961228)
chr4 (639-792)||(6047068-6047220)
chr4 (634-793)||(10615987-10616146)
chr4 (796-940)||(15058820-15058970)
chr4 (796-916)||(25011914-25012038)
chr4 (631-786)||(56113661-56113816)
chr4 (634-781)||(34370676-34370823)
chr4 (634-789)||(56112695-56112850)
chr4 (639-789)||(40841998-40842148)
chr4 (794-940)||(13397673-13397827)
chr4 (791-940)||(5304342-5304499)
chr4 (796-940)||(13826420-13826571)
chr4 (820-940)||(25618652-25618779)
chr4 (634-736)||(1960895-1960997)
chr4 (796-940)||(19232343-19232495)
chr4 (796-940)||(43793631-43793783)
chr4 (639-792)||(46170304-46170454)
chr4 (639-753)||(52035089-52035203)
chr4 (797-916)||(41877030-41877153)
chr4 (820-941)||(27018365-27018494)
chr4 (795-916)||(35475468-35475593)
chr4 (799-940)||(4357404-4357552)
chr4 (794-916)||(13394534-13394661)
chr4 (634-793)||(2420871-2421028)
chr4 (639-754)||(52034157-52034272)
chr4 (634-779)||(18704321-18704467)
chr4 (644-754)||(40873995-40874104)
chr4 (796-887)||(2931530-2931623)
chr4 (703-763)||(31183843-31183902)
chr4 (633-692)||(34369663-34369722)
chr4 (798-916)||(41034815-41034936)
chr4 (794-916)||(45633616-45633742)
chr4 (634-692)||(18705393-18705451)
chr4 (632-753)||(18667255-18667376)
chr4 (634-734)||(18703217-18703318)
chr4 (623-692)||(22813287-22813356)
chr4 (639-763)||(31182622-31182747)
chr4 (796-910)||(4433183-4433302)
chr4 (786-865)||(41877258-41877338)
chr4 (632-779)||(49700631-49700776)
chr4 (634-689)||(10614803-10614858)
chr4 (796-859)||(24626222-24626285)
chr4 (796-940)||(1588415-1588565)
chr4 (794-916)||(4098836-4098962)
chr4 (634-763)||(40872955-40873085)
chr4 (796-936)||(47869811-47869957)
chr4 (796-849)||(6789209-6789262)
chr4 (796-883)||(9195662-9195753)
chr4 (634-687)||(34155898-34155951)
chr4 (796-859)||(13397915-13397979)
chr4 (645-781)||(39701534-39701669)
chr4 (634-682)||(39702670-39702718)
chr4 (794-859)||(4357250-4357316)
chr4 (793-859)||(4433423-4433488)
chr4 (820-916)||(6788982-6789083)
chr4 (634-692)||(22812633-22812691)
chr4 (793-859)||(52838228-52838294)
chr4 (820-940)||(52838379-52838509)
chr4 (819-859)||(6319041-6319082)
chr4 (823-940)||(2715746-2715869)
chr4 (796-859)||(5304585-5304649)
chr4 (796-916)||(36729089-36729213)
chr4 (796-859)||(45633438-45633501)
chr4 (634-681)||(49700415-49700462)
chr4 (638-692)||(14835583-14835637)
chr4 (794-859)||(25011733-25011799)
chr4 (796-845)||(2931321-2931370)
chr4 (794-878)||(9397410-9397495)
chr4 (631-692)||(9397435-9397496)
chr4 (796-849)||(18259362-18259415)
chr4 (796-849)||(25618847-25618900)
chr4 (631-672)||(31183895-31183936)
chr4 (796-859)||(41034635-41034700)
chr4 (823-856)||(52490493-52490526)
[»] chr3 (70 HSPs)
chr3 (634-792)||(40630525-40630683)
chr3 (634-792)||(40630018-40630176)
chr3 (636-792)||(17341397-17341553)
chr3 (634-782)||(38261305-38261453)
chr3 (634-781)||(6247384-6247531)
chr3 (796-940)||(3328813-3328965)
chr3 (796-940)||(32960645-32960794)
chr3 (634-789)||(38262245-38262399)
chr3 (634-781)||(50296206-50296353)
chr3 (796-940)||(26628025-26628177)
chr3 (796-940)||(28154882-28155034)
chr3 (634-786)||(37087113-37087265)
chr3 (632-752)||(50297251-50297371)
chr3 (796-940)||(22447740-22447892)
chr3 (799-940)||(6927622-6927770)
chr3 (789-940)||(27852746-27852903)
chr3 (634-754)||(6248390-6248511)
chr3 (793-940)||(8338937-8339092)
chr3 (797-940)||(23428620-23428771)
chr3 (788-940)||(28173720-28173881)
chr3 (790-940)||(22500590-22500747)
chr3 (704-789)||(9435465-9435550)
chr3 (644-782)||(37088070-37088206)
chr3 (796-936)||(48907293-48907440)
chr3 (796-940)||(25022664-25022815)
chr3 (796-916)||(34878529-34878654)
chr3 (796-940)||(4522106-4522256)
chr3 (632-773)||(17340466-17340611)
chr3 (634-753)||(45583196-45583314)
chr3 (820-940)||(13081046-13081174)
chr3 (796-940)||(25179730-25179879)
chr3 (797-940)||(30155146-30155297)
chr3 (631-753)||(2213919-2214041)
chr3 (796-937)||(20001864-20002011)
chr3 (796-916)||(33279586-33279710)
chr3 (820-910)||(46673069-46673166)
chr3 (634-753)||(52985130-52985249)
chr3 (786-859)||(3329053-3329127)
chr3 (820-940)||(10743559-10743687)
chr3 (797-936)||(40836181-40836326)
chr3 (634-692)||(45580108-45580166)
chr3 (795-859)||(8339180-8339245)
chr3 (634-687)||(37023813-37023866)
chr3 (792-859)||(25336354-25336422)
chr3 (796-940)||(26633361-26633511)
chr3 (796-859)||(27852991-27853055)
chr3 (799-861)||(22447982-22448045)
chr3 (820-940)||(8542762-8542890)
chr3 (823-915)||(36311331-36311428)
chr3 (799-916)||(46387586-46387706)
chr3 (796-915)||(1743429-1743553)
chr3 (639-692)||(9434450-9434503)
chr3 (796-859)||(13080894-13080958)
chr3 (796-859)||(48907531-48907595)
chr3 (796-859)||(36311152-36311215)
chr3 (787-919)||(23320536-23320672)
chr3 (634-692)||(52986249-52986307)
chr3 (798-937)||(32315075-32315219)
chr3 (786-940)||(3781030-3781192)
chr3 (796-859)||(8542610-8542674)
chr3 (799-859)||(20001714-20001774)
chr3 (796-859)||(25179578-25179642)
chr3 (796-859)||(26628265-26628329)
chr3 (823-915)||(33105121-33105217)
chr3 (798-849)||(4775852-4775903)
chr3 (632-687)||(26127154-26127209)
chr3 (794-859)||(22500834-22500900)
chr3 (799-859)||(4521957-4522018)
chr3 (634-691)||(19984849-19984906)
chr3 (791-859)||(50296201-50296270)
[»] chr6 (54 HSPs)
chr6 (634-792)||(20891806-20891964)
chr6 (632-789)||(26444484-26444641)
chr6 (800-936)||(14572182-14572326)
chr6 (634-786)||(15976612-15976764)
chr6 (794-916)||(31210973-31211097)
chr6 (796-887)||(18749097-18749190)
chr6 (796-940)||(35102491-35102643)
chr6 (790-940)||(25819836-25819994)
chr6 (786-940)||(32451878-32452040)
chr6 (634-753)||(14456131-14456249)
chr6 (786-940)||(15298637-15298798)
chr6 (634-692)||(15981018-15981076)
chr6 (631-753)||(26444795-26444917)
chr6 (634-754)||(20583017-20583137)
chr6 (796-916)||(34834104-34834228)
chr6 (796-940)||(18791509-18791662)
chr6 (631-753)||(20583914-20584035)
chr6 (639-779)||(14455033-14455173)
chr6 (796-912)||(3118862-3118981)
chr6 (637-691)||(15888974-15889028)
chr6 (824-940)||(26710336-26710459)
chr6 (796-940)||(24603513-24603664)
chr6 (799-940)||(4597408-4597557)
chr6 (796-859)||(22968394-22968457)
chr6 (796-859)||(23819936-23819999)
chr6 (783-849)||(4597656-4597722)
chr6 (854-940)||(22968217-22968307)
chr6 (854-940)||(23820086-23820176)
chr6 (795-859)||(26710547-26710612)
chr6 (634-753)||(3488034-3488149)
chr6 (796-859)||(24051009-24051073)
chr6 (795-865)||(22269409-22269480)
chr6 (796-896)||(34528348-34528450)
chr6 (794-859)||(18749368-18749434)
chr6 (794-859)||(25819683-25819749)
chr6 (633-682)||(3489369-3489418)
chr6 (823-875)||(4013716-4013771)
chr6 (795-859)||(24603360-24603425)
chr6 (796-849)||(35102714-35102767)
chr6 (854-940)||(20863789-20863880)
chr6 (854-916)||(24051187-24051251)
chr6 (796-859)||(32451726-32451790)
chr6 (796-859)||(34833925-34833989)
chr6 (797-859)||(4013905-4013968)
chr6 (634-685)||(4370898-4370949)
chr6 (794-849)||(11623157-11623212)
chr6 (823-915)||(12291444-12291541)
chr6 (793-859)||(19282451-19282517)
chr6 (631-725)||(25819682-25819775)
chr6 (804-849)||(2018578-2018623)
chr6 (634-691)||(6842327-6842384)
chr6 (796-849)||(6842331-6842384)
chr6 (795-859)||(8415288-8415353)
chr6 (632-689)||(20863945-20864002)
[»] chr5 (53 HSPs)
chr5 (634-792)||(183089-183245)
chr5 (634-792)||(2024196-2024353)
chr5 (796-940)||(18695155-18695306)
chr5 (796-940)||(25556877-25557027)
chr5 (796-912)||(31055315-31055435)
chr5 (645-789)||(29353512-29353655)
chr5 (634-761)||(12949988-12950115)
chr5 (796-940)||(16900997-16901149)
chr5 (631-792)||(38107980-38108141)
chr5 (634-792)||(2023332-2023487)
chr5 (796-940)||(245746-245898)
chr5 (634-792)||(16799820-16799974)
chr5 (634-786)||(4533133-4533282)
chr5 (634-761)||(12935830-12935958)
chr5 (642-762)||(12948889-12949009)
chr5 (644-782)||(4533971-4534110)
chr5 (799-916)||(40428642-40428764)
chr5 (634-753)||(29993323-29993441)
chr5 (799-896)||(8645950-8646050)
chr5 (796-940)||(10379433-10379584)
chr5 (642-762)||(12934725-12934845)
chr5 (796-916)||(26639037-26639162)
chr5 (794-916)||(36641322-36641444)
chr5 (796-912)||(38408811-38408931)
chr5 (645-754)||(5014029-5014138)
chr5 (727-792)||(38107219-38107284)
chr5 (667-782)||(16793564-16793679)
chr5 (634-753)||(29352490-29352609)
chr5 (786-896)||(31648184-31648298)
chr5 (794-861)||(40428876-40428943)
chr5 (790-916)||(16307471-16307601)
chr5 (796-850)||(23765420-23765474)
chr5 (796-850)||(23815268-23815322)
chr5 (622-692)||(28223663-28223733)
chr5 (796-940)||(19169495-19169647)
chr5 (634-692)||(42877081-42877139)
chr5 (702-763)||(16228849-16228909)
chr5 (639-687)||(9070679-9070727)
chr5 (796-859)||(23765629-23765693)
chr5 (796-859)||(23815477-23815541)
chr5 (799-859)||(37961489-37961549)
chr5 (644-692)||(38107150-38107198)
chr5 (705-781)||(42876210-42876286)
chr5 (632-687)||(5015131-5015186)
chr5 (634-688)||(9072275-9072329)
chr5 (823-937)||(17825525-17825646)
chr5 (799-859)||(245599-245660)
chr5 (794-845)||(31576491-31576542)
chr5 (796-916)||(2373324-2373449)
chr5 (794-859)||(18695002-18695068)
chr5 (634-688)||(29994292-29994346)
chr5 (863-937)||(38476540-38476618)
chr5 (796-883)||(7835923-7836012)
[»] chr8 (74 HSPs)
chr8 (634-792)||(26363495-26363652)
chr8 (645-789)||(1192017-1192161)
chr8 (796-940)||(19391388-19391539)
chr8 (796-940)||(5192272-5192423)
chr8 (634-795)||(45020585-45020745)
chr8 (634-789)||(39581901-39582056)
chr8 (796-940)||(33895526-33895677)
chr8 (645-789)||(41774681-41774824)
chr8 (791-940)||(4807595-4807752)
chr8 (632-753)||(23753257-23753378)
chr8 (799-940)||(30784268-30784416)
chr8 (634-786)||(45021554-45021705)
chr8 (799-940)||(12723264-12723413)
chr8 (796-940)||(17648395-17648546)
chr8 (634-763)||(6571326-6571455)
chr8 (634-774)||(28301567-28301706)
chr8 (796-917)||(21929847-21929973)
chr8 (796-940)||(8802400-8802552)
chr8 (796-940)||(19924417-19924569)
chr8 (634-753)||(26830325-26830443)
chr8 (632-753)||(1190967-1191087)
chr8 (796-940)||(4518869-4519019)
chr8 (634-789)||(36984146-36984298)
chr8 (794-940)||(38630207-38630361)
chr8 (624-692)||(45519490-45519558)
chr8 (799-940)||(22452176-22452325)
chr8 (634-750)||(14055394-14055510)
chr8 (644-763)||(41944365-41944482)
chr8 (823-937)||(1824760-1824879)
chr8 (823-937)||(1859205-1859324)
chr8 (631-750)||(35563428-35563545)
chr8 (796-940)||(23565241-23565393)
chr8 (634-692)||(26831442-26831500)
chr8 (639-763)||(39580797-39580920)
chr8 (634-779)||(23754289-23754433)
chr8 (634-779)||(28301344-28301489)
chr8 (647-792)||(4377941-4378084)
chr8 (634-682)||(44296720-44296768)
chr8 (630-753)||(44297756-44297875)
chr8 (634-754)||(45518168-45518288)
chr8 (790-859)||(8802639-8802709)
chr8 (634-684)||(14054118-14054168)
chr8 (796-916)||(21666274-21666399)
chr8 (634-692)||(22255574-22255632)
chr8 (634-692)||(39688342-39688400)
chr8 (795-859)||(30784504-30784569)
chr8 (796-859)||(3380199-3380263)
chr8 (796-859)||(19392806-19392870)
chr8 (796-859)||(23565121-23565185)
chr8 (639-687)||(35562249-35562297)
chr8 (645-752)||(36985242-36985347)
chr8 (794-856)||(3819487-3819548)
chr8 (794-859)||(12723501-12723567)
chr8 (794-859)||(19924263-19924329)
chr8 (634-692)||(39688985-39689043)
chr8 (796-916)||(44147149-44147274)
chr8 (796-859)||(4519107-4519171)
chr8 (796-859)||(4807841-4807905)
chr8 (854-940)||(7117175-7117266)
chr8 (796-859)||(17648243-17648307)
chr8 (796-859)||(21930041-21930105)
chr8 (701-753)||(41773724-41773776)
chr8 (796-859)||(44146972-44147036)
chr8 (634-750)||(6572374-6572492)
chr8 (796-859)||(15869574-15869637)
chr8 (796-896)||(18881504-18881607)
chr8 (793-848)||(20788031-20788086)
chr8 (797-916)||(32400325-32400447)
chr8 (794-845)||(33895373-33895424)
chr8 (657-692)||(41767569-41767604)
chr8 (794-859)||(21666513-21666579)
chr8 (644-677)||(23410074-23410107)
chr8 (632-689)||(34602012-34602069)
chr8 (639-692)||(44066729-44066782)
[»] scaffold0151 (3 HSPs)
scaffold0151 (632-792)||(24804-24963)
scaffold0151 (632-792)||(37321-37480)
scaffold0151 (634-782)||(38272-38421)
[»] chr1 (59 HSPs)
chr1 (632-789)||(24033056-24033213)
chr1 (634-789)||(31376529-31376684)
chr1 (634-792)||(1532472-1532631)
chr1 (794-940)||(3616951-3617104)
chr1 (639-789)||(29183359-29183508)
chr1 (794-940)||(24962105-24962259)
chr1 (634-786)||(16276872-16277022)
chr1 (796-940)||(4059522-4059674)
chr1 (797-940)||(43706655-43706806)
chr1 (796-940)||(2425376-2425527)
chr1 (796-940)||(51719123-51719274)
chr1 (796-940)||(24196413-24196565)
chr1 (796-940)||(27092853-27093004)
chr1 (797-937)||(16551645-16551792)
chr1 (796-940)||(46432216-46432368)
chr1 (797-940)||(48471864-48472015)
chr1 (634-789)||(16273730-16273890)
chr1 (634-761)||(5971086-5971213)
chr1 (794-940)||(19077924-19078077)
chr1 (794-940)||(19125814-19125967)
chr1 (634-763)||(24037903-24038030)
chr1 (644-789)||(22778541-22778685)
chr1 (639-753)||(43914912-43915024)
chr1 (634-789)||(1531635-1531790)
chr1 (643-762)||(5972192-5972310)
chr1 (705-792)||(22776572-22776659)
chr1 (639-786)||(30106970-30107114)
chr1 (653-753)||(30105453-30105553)
chr1 (796-859)||(19078163-19078227)
chr1 (796-859)||(19126053-19126117)
chr1 (631-786)||(43916165-43916314)
chr1 (645-789)||(52142880-52143023)
chr1 (794-916)||(2657511-2657637)
chr1 (796-859)||(28919015-28919079)
chr1 (628-754)||(31377612-31377736)
chr1 (798-879)||(10684981-10685063)
chr1 (796-877)||(19563245-19563326)
chr1 (796-850)||(24750019-24750073)
chr1 (796-859)||(3616799-3616863)
chr1 (823-859)||(9387936-9387972)
chr1 (798-915)||(18606687-18606807)
chr1 (794-934)||(29181999-29182146)
chr1 (791-858)||(29676074-29676142)
chr1 (806-936)||(29676235-29676373)
chr1 (634-692)||(24032033-24032091)
chr1 (854-940)||(28920717-28920809)
chr1 (794-859)||(46432456-46432522)
chr1 (796-859)||(4059762-4059826)
chr1 (796-859)||(24196261-24196325)
chr1 (862-940)||(24749950-24750033)
chr1 (796-859)||(24961953-24962017)
chr1 (796-859)||(28920891-28920955)
chr1 (796-859)||(2657752-2657815)
chr1 (796-859)||(9387695-9387758)
chr1 (796-892)||(16972055-16972154)
chr1 (786-856)||(28552295-28552366)
chr1 (797-859)||(50334719-50334782)
chr1 (794-859)||(10684792-10684858)
chr1 (627-681)||(43602072-43602126)
[»] scaffold0607 (1 HSPs)
scaffold0607 (796-940)||(2048-2201)
[»] scaffold0406 (1 HSPs)
scaffold0406 (796-940)||(2143-2294)
[»] scaffold0203 (3 HSPs)
scaffold0203 (625-761)||(9553-9689)
scaffold0203 (625-761)||(14927-15063)
scaffold0203 (634-762)||(16035-16163)
[»] scaffold0060 (2 HSPs)
scaffold0060 (796-940)||(66326-66477)
scaffold0060 (788-859)||(66174-66248)
[»] scaffold1212 (2 HSPs)
scaffold1212 (709-792)||(2183-2266)
scaffold1212 (634-682)||(2135-2183)
[»] scaffold0446 (1 HSPs)
scaffold0446 (634-789)||(11561-11716)
[»] scaffold0827 (1 HSPs)
scaffold0827 (633-753)||(3226-3346)
[»] scaffold0179 (1 HSPs)
scaffold0179 (796-940)||(5650-5801)
[»] scaffold0062 (2 HSPs)
scaffold0062 (796-940)||(49811-49962)
scaffold0062 (796-940)||(62350-62501)
[»] scaffold0025 (3 HSPs)
scaffold0025 (796-940)||(19434-19585)
scaffold0025 (796-916)||(61995-62122)
scaffold0025 (796-859)||(61814-61878)
[»] scaffold0419 (2 HSPs)
scaffold0419 (794-916)||(2959-3085)
scaffold0419 (794-859)||(3200-3266)
[»] scaffold0001 (2 HSPs)
scaffold0001 (794-940)||(141943-142099)
scaffold0001 (799-859)||(142186-142247)
[»] scaffold0150 (1 HSPs)
scaffold0150 (796-916)||(6010-6134)
[»] scaffold0683 (2 HSPs)
scaffold0683 (820-916)||(5144-5246)
scaffold0683 (796-859)||(5290-5354)
[»] scaffold0087 (1 HSPs)
scaffold0087 (820-916)||(24988-25089)
[»] scaffold0007 (1 HSPs)
scaffold0007 (794-940)||(250516-250670)
[»] scaffold0050 (2 HSPs)
scaffold0050 (634-753)||(80948-81065)
scaffold0050 (639-770)||(79838-79967)
[»] scaffold1875 (1 HSPs)
scaffold1875 (786-896)||(746-860)
[»] scaffold0187 (1 HSPs)
scaffold0187 (828-896)||(4947-5014)
[»] scaffold0174 (1 HSPs)
scaffold0174 (794-850)||(29937-29993)
[»] scaffold0047 (1 HSPs)
scaffold0047 (638-692)||(32417-32471)
[»] scaffold0005 (1 HSPs)
scaffold0005 (638-692)||(4062-4116)
[»] scaffold0028 (1 HSPs)
scaffold0028 (629-690)||(31974-32035)


Alignment Details
Target: chr2 (Bit Score: 386; Significance: 0; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 8 - 570
Target Start/End: Original strand, 7716012 - 7716581
Alignment:
Q  8 gctatttggcaccttattcgttgttggattgggannnnnnnctgtcaacccttttggtatttcagaccattttgttatgtttggtcatttaacatacgtt 107  Q
    |||||||||||||||| || ||||||||||||||       ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7716012 gctatttggcaccttaatcattgttggattgggatttttt-ctgtcaacccttttggtattttagaccattttgttatgtttggtcatttaacatacgtt 7716110  T
Q  108 tctaaagttccgcgatctatctcgcacgtcat---ttggttcttttgtgttcgtgtaatttggaaagagaggaacagcaaaattttcaattcagtagctc 204  Q
    |||||||||| |||||||||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  7716111 tctaaagttcagcgatctatctcacacgtcatcatttggttcttttgtgttcgtgtaatttggaaagagaggaacaacaaaattttcaattcagcagctc 7716210  T
Q  205 ttgggcaaaattaagttactttcttatttgtagcaaaatatgctaatattgtttttgggtatcatagccagtggcttgcccctttctcttgtttcggcat 304  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  7716211 ttgggcaaaattaagttactttcttattagtagcaaaatatgctaatattgtttttgggtatcatagctagtggcttgcccctttctcttgtttcgacat 7716310  T
Q  305 tgtttaattgctctctgttattgttctctcatatcaatatttacttgttccttttataatctatgatgttcgt-gtaat---tcttgtgctgcatagaat 400  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||| |  ||||   ||||||||||||||||||    
T  7716311 tgtttaattgctctctattatttttctctcatatcaatatttacttgtttcttttataatctctgatgttcttcttaatacatcttgtgctgcatagaat 7716410  T
Q  401 gttttcttgttggtaatatattccatttgattcttt-nnnnnnnnnnnnntttagttaaaaattgatagccggaaagtgagctctatgtgagattgaaag 499  Q
    ||||| ||||||||||||||||||||||||||||||              |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  7716411 gtttttttgttggtaatatattccatttgattctttaaaaaaactttttttttagttaaaaactgaaagccggaaagtgagctctatgtgagattgaaag 7716510  T
Q  500 ggtatgtactcttatggatatagagaccctgggagtaaaatgttgcagaagcagcagaactgacttcgtgg 570  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7716511 ggtatgtactcttatggatatagagaccctgggagtaaaatgttgcagaagcagcagaactgacttcgtgg 7716581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 549
Target Start/End: Original strand, 7723784 - 7724342
Alignment:
Q  8 gctatttggcaccttattcgttgttggattgggannnnnnnctgtcaacccttttggtatttcagaccattttgttatgtttggtcatttaacatacgtt 107  Q
    |||||||| |||||| ||||| ||||||||||||       | ||||||||||||||||||| |||  |||||||| | |||||||||||| ||||||||    
T  7723784 gctatttgacaccttgttcgtcgttggattgggatttttt-cggtcaacccttttggtattttagaatattttgttctatttggtcatttagcatacgtt 7723882  T
Q  108 tctaaagttccgcgatctatctcgcacgtcatttggttcttttgtgttcgtgtaatttggaaagagaggaacagcaaaattttcaattcagtagctcttg 207  Q
    |||||||||| |||||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||| ||| ||||||||||||| ||||||||    
T  7723883 tctaaagttcagcgatctatctcgcacgtcatttggttcttttatgcttgtgtaatttagaaagagaggaacaacaatattttcaattcagcagctcttg 7723982  T
Q  208 ggcaaaattaagttactttcttatttgtagcaaaatatgctaatattgtttttgggtatcatagccagtggcttgcccctttctcttgtttcggcattgt 307  Q
    | ||| ||||| ||||| ||||||| || ||||| ||||||||||||||| |||| ||||||||||  ||||||| ||||||| |||||||  |||||||    
T  7723983 gacaacattaaattactctcttattggtggcaaattatgctaatattgttcttggatatcatagccgatggcttgtccctttcccttgtttgagcattgt 7724082  T
Q  308 ttaattgctctctgttattgttctctcatatcaatatttacttgttccttttataatc---tatgatgttcgtgtaattc-----------ttgtgctgc 393  Q
    ||||||||||||||||||| | ||||| ||||| | |||||||||||||||||||| |   |||| | ||| | |||| |           ||||||| |    
T  7724083 ttaattgctctctgttattttactctcttatcattttttacttgttccttttataaacccatatgttcttc-tctaatacttcttgtgcagttgtgcttc 7724181  T
Q  394 atagaatgttttcttgttggtaatatattccatt-tgattctttnnnnnnnnnnnnntttagttaaaaattgatagccggaaagtgagctctatgtgaga 492  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||             |||||||||||||||| ||||||||||||||||||||||||||    
T  7724182 atagaatgttttcttgttgataatatattccattctgattcgttaaaaaaacaattttttagttaaaaattgaaagccggaaagtgagctctatgtgaga 7724281  T
Q  493 ttgaaaggg----tatgtactcttatggatatagagaccctgggagtaaaatgttgcagaa 549  Q
    |||||||||    ||| ||||||||||||||||||| | |||||||||||||| |||||||    
T  7724282 ttgaaagggtatctatctactcttatggatatagaggctctgggagtaaaatgatgcagaa 7724342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 8 - 549
Target Start/End: Original strand, 7729934 - 7730486
Alignment:
Q  8 gctatttggcaccttattcgttgttggattgggannnnnnnctgtcaacccttttggtatttcagaccattttgttatgtttggtcatttaacatacgtt 107  Q
    ||||||||||||||| ||||| ||||||||||||       |  |||||||||||||||||| || |||||||||| ||||  |||||||| || |||||    
T  7729934 gctatttggcaccttgttcgtcgttggattgggatttttt-cgatcaacccttttggtattttaggccattttgttttgttatgtcatttagcacacgtt 7730032  T
Q  108 tctaaagttccgcgatctatctcgcacgtcatttggttcttttgtgttcgtgtaatttggaaagagaggaacagcaaaattttcaattcagtagctcttg 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||| ||| ||||||||||||  |||| |||    
T  7730033 tctaaagttccgcgatctatctcgcacgtcatttggttcttttgtttttgtgtaatttagaaagagaggaacaacaatattttcaattcaacagctgttg 7730132  T
Q  208 ggcaaaattaagttactttcttatttgtagcaaaatatgctaatattgtttttgggtatcatagccagtggcttgcccctttctcttgtttcggcattgt 307  Q
    | ||||||||||||||  ||||||| || |||||||||| ||||||||||||||| ||||||||||  ||||||| ||||||| |||||||  |||||||    
T  7730133 gacaaaattaagttacactcttattggtggcaaaatatgttaatattgtttttggatatcatagccgatggcttgtccctttcccttgtttgagcattgt 7730232  T
Q  308 ttaattgctctctgttattgttctctcatatcaatatttacttgttccttttataatctatgatgt--tcgtgtaattcttgtgctgcatagaatgtttt 405  Q
    ||||||||||||| ||||| ||||||  ||||| | |||| |||||||||| |||| || |||| |  ||  |||  ||||||||| |||| ||||||||    
T  7730233 ttaattgctctcttttattcttctct--tatcattttttatttgttcctttaataaactctgatcttctctagtacatcttgtgctacataaaatgtttt 7730330  T
Q  406 cttgttggta----atatattccatt-tgattc-tttnnnnnnnnnnnnntttagttaaaaattgatagccggaaagtgagctctatgtgagattgaaag 499  Q
    |||||||| |    |||||||||||| | |||| ||              |||||||||||||||| |||||||||||||||||||  |||| |||||||    
T  7730331 cttgttggaaatatatatattccattcttattcattaaaaaaaacatttttttagttaaaaattgaaagccggaaagtgagctctacatgagtttgaaag 7730430  T
Q  500 ggtatgtactct------tatggatatagagaccctgggagtaaaatgttgcagaa 549  Q
    ||||| ||||||      ||||||||||||| |  |||||||||||||||||||||    
T  7730431 ggtatctactcttgtggatatggatatagaggctatgggagtaaaatgttgcagaa 7730486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 641 - 795
Target Start/End: Original strand, 26068898 - 26069052
Alignment:
Q  641 acgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaa 740  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  26068898 acgcactttttaccccttaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgatcccctatgtttacccccttttgcaaaa 26068997  T
Q  741 cgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttattatt 795  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26068998 cgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttattatt 26069052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 794 - 940
Target Start/End: Complemental strand, 9787863 - 9787711
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaatagcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||||||| ||||||| ||||  ||||||||||||| |||||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||||    
T  9787863 ttggctaaactacacttttcgccccctatgtttcaaaatattgcaattttggccccctattaaaaaatgacaattttggcccctttcatccaaaaattgc 9787764  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||||||| |||| ||||||||||||    
T  9787763 tgagaagacgccacgtgtcccaaaaaaggggccataatcgtaactttttgtaa 9787711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 794 - 940
Target Start/End: Complemental strand, 17368520 - 17368368
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaa-aaaatagcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||||||  ||||||| ||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||     
T  17368520 ttggctaaacaacacttttcgccccctatgtttcaaaatgttgcaattttggcccctattaaaaaaatagcaattttggcccctttcatccaaaaaatgt 17368421  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||||||| || ||||||||||||||    
T  17368420 tgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaa 17368368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 18537829 - 18537980
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaa-aatagcaattttggcccctttcatcc-aaaattgct 892  Q
    ||||||||||||||||| | ||  ||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  18537829 ggctaaactgcacttttcgtcccctatgttttaaaatgttgcaattttggtcccctattaaaaaaatagcaattttggcccctttcatccaaaaattgct 18537928  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||||||||||||||||  ||||||| || ||||||||||||||    
T  18537929 gagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaa 18537980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 634 - 761
Target Start/End: Original strand, 20126185 - 20126312
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||| |||  ||||||| ||||||     
T  20126185 ggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgacccctcatgtttagccccttc 20126284  T
Q  734 tgcaaaacgtcaattttgacccagtcaa 761  Q
    |||||||| |||||||||||| ||||||    
T  20126285 tgcaaaacctcaattttgacctagtcaa 20126312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 795 - 940
Target Start/End: Complemental strand, 38716497 - 38716345
Alignment:
Q  795 tggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaa-tagcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||||||||||||||  ||   ||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||||||||||||| ||||||||    
T  38716497 tggctaaactgcacttttcacctcctatgtttcaaaatgttgcaattttgaccccctataaaaaaaatagcaattttggcccctttcatccaaaaattgc 38716398  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  38716397 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 38716345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 634 - 786
Target Start/End: Original strand, 27848336 - 27848487
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||  |||||| |||||| ||||||||    
T  27848336 ggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagctatcccc-atgttttcccccttt 27848434  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgta 786  Q
    ||||||||||| ||||||||| | ||||||   ||||||| ||||| ||||||    
T  27848435 tgcaaaacgtcgattttgaccgaatcaaccatgtgtggcatgccacatgtgta 27848487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 644 - 792
Target Start/End: Complemental strand, 33076302 - 33076155
Alignment:
Q  644 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgt 743  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||  | |||| |||||| ||||||||||||||||||    
T  33076302 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagcta-cccccatgttttcccccttttgcaaaacgt 33076204  T
Q  744 caattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    | ||||||||| | ||||||  |||||||| ||||| || |||||||||    
T  33076203 cgattttgaccgaatcaaccatatgtggcatgccacttgggtatttatt 33076155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 795 - 940
Target Start/End: Complemental strand, 15735368 - 15735216
Alignment:
Q  795 tggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    |||||||||| ||||||| ||||  ||||||| |||||||||||||||||| ||||| || ||||||| |||||||||||||||||||| |||||||||     
T  15735368 tggctaaactccacttttcgccccctatgttttaaaatgttgcaattttggtccccttttaaaaaaatggcaattttggcccctttcatcccaaaattgt 15735269  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  15735268 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 15735216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 793 - 940
Target Start/End: Original strand, 25298798 - 25298953
Alignment:
Q  793 attggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctattaaaaaata--gcaattttggcccctttcat-ccaaaat 888  Q
    ||||| |||| ||||||||| ||||  ||||||| |||||||||| ||||||||| |||||||||||| |  |||||||||||||| ||||| |||||||    
T  25298798 attggttaaagtgcacttttcgccccctatgttttaaaatgttgcgattttggcctcctattaaaaaaaattgcaattttggcccccttcatcccaaaat 25298897  T
Q  889 tgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    || |||| |||||||||||||||||||||  ||||||| |||||||||||||||||    
T  25298898 tgttgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 25298953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 15701050 - 15700899
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| ||||||||| ||||  ||||||||| |||||||| ||||||  |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  15701050 ggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatttaaaaaatagcaattttggcccctttcatcccaaaattgct 15700951  T
Q  893 gag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
     || ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  15700950 cagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaa 15700899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 634 - 762
Target Start/End: Complemental strand, 20127409 - 20127281
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| ||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||        |||||||||||| ||| |||||||| |||||||    
T  20127409 ggcttaaatgcactttttaccccttaagtttacaaaggttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttatccccttt 20127310  T
Q  734 tgcaaaacgtcaattttgacccagtcaac 762  Q
    |||||||| ||||||||||| | ||||||    
T  20127309 tgcaaaacctcaattttgactcggtcaac 20127281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 30714275 - 30714426
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| ||||||||| ||||  ||||||| |||||||||| ||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  30714275 ggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttggccccctattaaaaaaatggcaattttggcccctttcatcccaaaattgct 30714374  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| ||||| |||||||||||  ||||||| ||| |||||||||||||    
T  30714375 gagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaa 30714426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 634 - 761
Target Start/End: Original strand, 3453335 - 3453462
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||||||| ||| ||||| |||||||||||||||||||||| ||||||| |||||||||         ||||||||||| ||| |||||||| ||||||     
T  3453335 ggctaaaatgcaatttttgccccctaagtttgcaaaagttgaaattttgaccccctattaaaaaaaaaggcaaaagtgaccccttatgtttagccccttc 3453434  T
Q  734 tgcaaaacgtcaattttgacccagtcaa 761  Q
    |||||||| |||||||||||||||||||    
T  3453435 tgcaaaacctcaattttgacccagtcaa 3453462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 798 - 940
Target Start/End: Complemental strand, 22191347 - 22191198
Alignment:
Q  798 ctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaata--gcaattttggcccctttcat-ccaaaattgctg 893  Q
    ||||||| ||||||| |||   |||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||||||| ||||||||||||    
T  22191347 ctaaactacacttttcgcctcctatgtttcaaaatgttgcaattttggtcccctattaaaaaaaaaggcaattttggcccctttcatcccaaaattgctg 22191248  T
Q  894 ag-agatgccacgtgtccc-aaaaagggccat-atcgcaactttttgtaa 940  Q
    || ||  |||||||||||| |||||||| ||| |||| ||||||||||||    
T  22191247 agaaggcgccacgtgtcccaaaaaagggtcataatcgtaactttttgtaa 22191198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 634 - 789
Target Start/End: Complemental strand, 27849441 - 27849287
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||||| |||||||||| ||||||||||||||| ||||||||||        |||||||||  | |||| |||||| ||||||||    
T  27849441 ggcttaaactcactttttacctcctaagtttgtaaaagttgcaattttagccccctattaaaaaaa-tggcaaaagctaccccccatgttttcccccttt 27849343  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    ||||||||||| ||||||||| |||||||   |||||||| |||||||| ||||||    
T  27849342 tgcaaaacgtcgattttgaccgagtcaactatatgtggcatgccacctgggtattt 27849287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 634 - 752
Target Start/End: Complemental strand, 3454503 - 3454384
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt-nnnnnnnntggcaaaagtgatcccctatgtttaccccctt 732  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||         |||||||||||| ||| |||||||| ||||||    
T  3454503 ggctaaaacgcaccttttgccccctaagtttgcaaaagttgtaattttggccccctattaaaaaaaaatggcaaaagtgaccccttatgtttagcccctt 3454404  T
Q  733 ttgcaaaacgtcaattttga 752  Q
     |||||||| ||||||||||    
T  3454403 ctgcaaaacctcaattttga 3454384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 634 - 753
Target Start/End: Complemental strand, 42702174 - 42702055
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||        ||||||||| || ||| |||||||| |||||||    
T  42702174 ggcttaaacgcactttttaccccttaagtttacaaaggttgcaattttggtcccctattaaaaaaaatggcaaaagcgaccccttatgtttatccccttt 42702075  T
Q  734 tgcaaaacgtcaattttgac 753  Q
    |||||||| |||||||||||    
T  42702074 tgcaaaacctcaattttgac 42702055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 2986990 - 2986838
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||| |||||||||  | || |||||||||||||||||| ||||||| ||||||||  ||||||| |||||||||||||| ||||| ||||||||||    
T  2986990 ggctaaagtgcacttttcactctctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgc 2986891  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||| |||||| |||||  ||||||| |||||||||||||||||    
T  2986890 tgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaa 2986838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 11176211 - 11176059
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||| |||||||||||||   |||||||||||||||||| ||||||  ||||||||  ||||||| |||||||||  ||||||||| ||||||||||    
T  11176211 ggctaaagtgcacttttggcctcctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttgatccctttcatcccaaaattgc 11176112  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||||||| ||| |||||||||||||    
T  11176111 tgagaagacgccacgtgtcccaaaaaaggggccataatcacaactttttgtaa 11176059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 789 - 940
Target Start/End: Original strand, 9051021 - 9051179
Alignment:
Q  789 tattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaata--gcaattttggcccctttcatc-ca 884  Q
    |||| ||||||||| |||| |||| |||   ||||||| |||||||||| ||||||  |||||||||||||| |  |||||||||||||| |||||| ||    
T  9051021 tatttttggctaaagtgcatttttcgcctcctatgttttaaaatgttgcgattttgatcccctattaaaaaaaatggcaattttggcccccttcatctca 9051120  T
Q  885 aaattgctgag-agatgccacgtgtccc-aaaaagggccat-atcgcaactttttgtaa 940  Q
    ||||||||||| ||| ||| |||||||| |||||||||||| |||||||||||||||||    
T  9051121 aaattgctgagaagacgccccgtgtcccaaaaaagggccataatcgcaactttttgtaa 9051179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 796 - 916
Target Start/End: Original strand, 6763717 - 6763842
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    |||||||||||| |||| ||||||||||||| |||||||||  ||||||| ||||||||  ||||||| |||||||||| || ||| || ||||||||||    
T  6763717 ggctaaactgcattttttgccctttatgttttaaaatgttgtgattttggtcccctattaaaaaaaatggcaattttggtccattttatcccaaaattgc 6763816  T
Q  892 tgag-agatgccacgtgtcccaaaaa 916  Q
    |||| ||| |||||||||||||||||    
T  6763817 tgagaagacgccacgtgtcccaaaaa 6763842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 645 - 754
Target Start/End: Original strand, 42700961 - 42701070
Alignment:
Q  645 actttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtc 744  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||        |||||||| ||| ||| |||| ||| |||||||||||||||  |    
T  42700961 actttttaccccctaagtttgcaaaggttgcaattttgaccccctattaaaaaaaatggcaaaaatgaccccttatgcttagccccttttgcaaaacccc 42701060  T
Q  745 aattttgacc 754  Q
    ||||||||||    
T  42701061 aattttgacc 42701070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 634 - 692
Target Start/End: Complemental strand, 24607837 - 24607779
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  24607837 ggctaaaacacactttttgccccctaagtttgcaaaggttgcaattttggccccctatt 24607779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 631 - 786
Target Start/End: Original strand, 33075183 - 33075336
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccc 730  Q
    ||||||| ||||  |||||||||| |||||||||| |||||||| ||||||| ||| |||||        |||||||||  | |||| |||||| |||||    
T  33075183 tttggcttaaacttactttttacctcctaagtttgtaaaagttgtaattttgaccctctattaaaaaaa-tggcaaaagctaccccc-atgttttccccc 33075280  T
Q  731 ttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgta 786  Q
    |||||||||||||| ||||||||| ||||||||  |||||||| ||||| ||||||    
T  33075281 ttttgcaaaacgtcgattttgaccgagtcaaccatatgtggcatgccacatgtgta 33075336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 799 - 937
Target Start/End: Complemental strand, 36464572 - 36464428
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccct-attaaaaaatag-caattttggcccctttcatcc-aaaattgctgag 895  Q
    |||||||||||||| |||   || ||||||||||||||| ||||||  |||| |||||||||  | ||||||||| || |||| ||| ||||||||||||    
T  36464572 taaactgcacttttcgcctcctaagtttcaaaatgttgcgattttgatcccttattaaaaaaatgacaattttggtccatttcgtcccaaaattgctgag 36464473  T
Q  896 a-gatgccacgtgtcccaaaaa--gggccatatcgcaactttttg 937  Q
    | |||| |||||||| ||||||  |||||||||||||||||||||    
T  36464472 aagatgtcacgtgtctcaaaaaaggggccatatcgcaactttttg 36464428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 789 - 859
Target Start/End: Original strand, 2986679 - 2986750
Alignment:
Q  789 tattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||| ||| |||||| ||||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  2986679 tattaatggttaaacttcacttttcgccctttaagtttcaaaatgttgcgattttggccccctattaaaaaa 2986750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 788 - 857
Target Start/End: Original strand, 15735056 - 15735126
Alignment:
Q  788 ttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaa 857  Q
    ||||||| ||||||||| ||||||| ||||| || ||||||||||||||| ||||||| ||||||||||||    
T  15735056 ttattataggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggtcccctattaaaa 15735126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 682
Target Start/End: Original strand, 3627615 - 3627663
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttg 682  Q
    |||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  3627615 ggcttaaacacactttttaccccttaagtttgcaaaagttgcaattttg 3627663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 11175907 - 11175971
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  11175907 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 11175971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 18538132 - 18538068
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  18538132 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 18538068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 796 - 896
Target Start/End: Original strand, 25884178 - 25884281
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||||||||| ||| ||||  || |||| |||||||||| ||||||| |||||||| ||||||| | ||||||||||| |||| | |||||||||||    
T  25884178 ggctaaactgcacatttcgccccctaagttttaaaatgttgcgattttggccccctattaaaaaaatggtaattttggcccttttcgtcccaaaattgct 25884277  T
Q  893 gaga 896  Q
    ||||    
T  25884278 gaga 25884281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 6764021 - 6763957
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| || |||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  6764021 ggctaaacttcatttttcgccctctaagtttcaaaatgttgcgattttggtcccctattaaaaaa 6763957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 823 - 937
Target Start/End: Complemental strand, 28365787 - 28365665
Alignment:
Q  823 gtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtccc--aaaa 915  Q
    ||||||||||||||||||||||| ||| ||||  |||||| | |||||||| |||||||| | |||||||||||||| ||| |||| | |||||  ||||    
T  28365787 gtttcaaaatgttgcaattttggtcccttattaaaaaaaaaatcaattttgccccctttcgtcccaaaattgctgagaagacgccatgcgtcccaaaaaa 28365688  T
Q  916 agggccat-atcgcaactttttg 937  Q
    |||| ||| ||||||||||||||    
T  28365687 agggtcataatcgcaactttttg 28365665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 30714578 - 30714514
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| ||  ||| |||||||||||||||||| ||||||||||||||    
T  30714578 ggctaaacttcacttttcgccctctaaattttaaaatgttgcaattttggccccctattaaaaaa 30714514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 721 - 789
Target Start/End: Original strand, 30793933 - 30794001
Alignment:
Q  721 gtttacccccttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    ||||| ||||||||||||||| |||||||||||  |||||| || ||||| || |||| ||||||||||    
T  30793933 gtttagccccttttgcaaaacatcaattttgacttagtcaaacctatgtgtcatgccaactgtgtattt 30794001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 719 - 763
Target Start/End: Complemental strand, 34388009 - 34387965
Alignment:
Q  719 atgtttacccccttttgcaaaacgtcaattttgacccagtcaacc 763  Q
    |||||||||||| |||||||||| || ||||||||||||||||||    
T  34388009 atgtttacccccctttgcaaaacatccattttgacccagtcaacc 34387965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 763
Target Start/End: Original strand, 34386876 - 34386995
Alignment:
Q  644 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgt 743  Q
    ||||||||||| |||||||||| || | ||||||||||||  |||| ||        ||| |||| ||| || | || ||||||||||||||||||||      
T  34386876 cactttttaccgcctaagtttggaacaattgcaattttggttcccttttaaaaaaaatggtaaaaatgaccctccatatttacccccttttgcaaaaccc 34386975  T
Q  744 caattttgacccagtcaacc 763  Q
    ||||||||||| ||||||||    
T  34386976 caattttgacctagtcaacc 34386995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 43301657 - 43301720
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    |||||||||||| |||| |||  ||| ||||| ||||||||| ||||||||| |||||||||||    
T  43301657 ggctaaactgcatttttcgcctcttaagtttcgaaatgttgcgattttggcctctattaaaaaa 43301720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 789
Target Start/End: Original strand, 44702364 - 44702427
Alignment:
Q  726 cccccttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    ||||||||||||||| ||| ||||||||| ||||||||  | |||||| |||||||| ||||||    
T  44702364 cccccttttgcaaaatgtcgattttgaccgagtcaaccatacgtggcatgccacctgggtattt 44702427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 625 - 691
Target Start/End: Original strand, 13830258 - 13830323
Alignment:
Q  625 tttatatttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctat 691  Q
    ||||||||||| ||||  ||||||||  ||||||||||||| ||||||||| |||||| ||||||||    
T  13830258 tttatatttggttaaagtgcacttttc-ccccctaagtttgaaaaagttgcgattttgaccccctat 13830323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 683
Target Start/End: Complemental strand, 3628173 - 3628120
Alignment:
Q  630 atttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttgg 683  Q
    |||||||| ||||||| | ||||||| |||||||||||||||| | ||||||||    
T  3628173 atttggcttaaacgcattatttaccctctaagtttgcaaaagtagtaattttgg 3628120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 849
Target Start/End: Original strand, 22191046 - 22191099
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc 849  Q
    ||||||||| ||||||| | ||  ||||||| ||||||||||||||||||||||    
T  22191046 ggctaaactacacttttcgtcccctatgttttaaaatgttgcaattttggcccc 22191099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 1e-71; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 634 - 795
Target Start/End: Complemental strand, 16957319 - 16957158
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  16957319 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgatcccctatgtttacccccttt 16957220  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttattatt 795  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16957219 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttattatt 16957158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 634 - 792
Target Start/End: Complemental strand, 7314307 - 7314149
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||        |||||||||||| || | ||||||| |||||||    
T  7314307 ggcttaaacacactttttaccccctaagtttgcaaaagttgcaattttggcccccttttaaaaaaaatggcaaaagtgaccctccatgtttatccccttt 7314208  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    | |||||| |||||||||||||||||||||  |  ||||| ||||||||||||||||||    
T  7314207 tacaaaacctcaattttgacccagtcaaccatacttggcatgccacctgtgtatttatt 7314149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 21224354 - 21224504
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaa-aatagcaattttggcccctttcatcc-aaaattgct 892  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  21224354 ggctaaactgcatttttcgccctt-atgtttcaaaatgttgcaattttggtcccctattaaaaaaatagcaattttggcccctttcatccaaaaattgct 21224452  T
Q  893 gag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||||||||| |  |||||||||||| |||||||||||||||||    
T  21224453 gagaagacgccacgtgtctcaaaaaaagggccataatcgcaactttttgtaa 21224504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 791 - 940
Target Start/End: Complemental strand, 31494219 - 31494062
Alignment:
Q  791 ttattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcatcc-aaa 886  Q
    ||||||||||||||||| |||| || || |||||||||||||||||| ||||||| ||||||||  ||||||| |||||||||||||||||||||| |||    
T  31494219 ttattggctaaactgcatttttcgcactctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccctttcatcctaaa 31494120  T
Q  887 attgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||||||||| ||| ||||||||| |||||||  ||||||| |||||||||||||||||    
T  31494119 attgctgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaa 31494062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 794 - 940
Target Start/End: Complemental strand, 10655634 - 10655481
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa--tagcaattttggcccctttcat-ccaaaatt 889  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||||| | ||||||||||||||  |||||||||||||||||||||| ||||||||    
T  10655634 ttggctaaactgcacttttcgcc-tctatgtttcaaaatgttgcaatttttgtcccctattaaaaaaaatagcaattttggcccctttcatcccaaaatt 10655536  T
Q  890 gctgag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
    ||| || ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  10655535 gctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaa 10655481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 634 - 786
Target Start/End: Original strand, 42337069 - 42337221
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||        |||||||||  | |||| |||||| ||||||||    
T  42337069 ggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggcaccctattaaaaaaaatggcaaaagctaccccccatgttttcccccttt 42337168  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgta 786  Q
    ||||||| | ||||||||||| ||||||||  |||||||| ||||| ||||||    
T  42337169 tgcaaaatgccaattttgaccgagtcaaccatatgtggcatgccacatgtgta 42337221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 794 - 940
Target Start/End: Original strand, 35337521 - 35337674
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcatc-caaaattg 890  Q
    ||||||||| ||||||||| ||||||||||||| ||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||||  ||||||     
T  35337521 ttggctaaattgcacttttcgccctttatgttttaaaatattgcagttttggtcccctattaaaaaaatagcaattttggcccctttcatcaaaaaatta 35337620  T
Q  891 ctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
     |||| ||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  35337621 ttgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaa 35337674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 632 - 789
Target Start/End: Complemental strand, 42338210 - 42338053
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccct 731  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||||||||||| ||||||        ||||||||   | |||| |||||| ||| ||    
T  42338210 ttggcttaaactcactttttgccccctaagtttgcaaaagttgcaattttggcctcctattaaaaaaaatggcaaaaacaaccccccatgttttccctct 42338111  T
Q  732 tttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    ||||||||||||| ||||||||| ||||||||  |||||||| ||||| || ||||||    
T  42338110 tttgcaaaacgtcgattttgaccgagtcaaccatatgtggcatgccacttgggtattt 42338053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 19195214 - 19195365
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaa-aatagcaattttggcccctttcatcc-aaaattgct 892  Q
    |||||||||||| ||||  |||  ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||| |    
T  19195214 ggctaaactgcatttttcaccccctatgtttcaaaatattgcaattttggtcccctattaaaaaaatagcaattttggcccctttcatccaaaaattgtt 19195313  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| ||||| |||||||||||  ||||||| ||| |||||||||||||    
T  19195314 gagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaa 19195365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 634 - 753
Target Start/End: Complemental strand, 35960260 - 35960143
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||        ||||||||||||  ||| ||||||| |||||||    
T  35960260 ggcttaaacccactttttaccccctaattttgcaaaagttgcaattttagccccctattaaaaaaaatggcaaaagtga--ccccatgtttagccccttt 35960163  T
Q  734 tgcaaaacgtcaattttgac 753  Q
    ||||||||||||||||||||    
T  35960162 tgcaaaacgtcaattttgac 35960143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 799 - 915
Target Start/End: Complemental strand, 19493617 - 19493498
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaatagcaattttggcccctttcat-ccaaaattgctgag- 895  Q
    ||||||||| |||| |||||||| |||| |||||||||| |||||| |||| |||||||||||||||||||||||||||||||| ||||||| ||||||     
T  19493617 taaactgcatttttcgccctttaagttttaaaatgttgcgattttgaccccctattaaaaaatagcaattttggcccctttcatcccaaaatggctgaga 19493518  T
Q  896 agatgccacgtgtcccaaaa 915  Q
    ||| ||||||||||| ||||    
T  19493517 agacgccacgtgtcctaaaa 19493498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 48175962 - 48176115
Alignment:
Q  796 ggctaaactgcacttttg-gccctttatgtttcaaaatgttgcaattttggcccc-tatta--aaaaatagcaattttggcccctttcat-ccaaaattg 890  Q
    |||||||||||||||||  ||||  ||||||||| |||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  48175962 ggctaaactgcactttttcgccccctatgtttcataatgttgcgattttggccccctattagaaaaaatagcaattttggcccctttcatcccaaaattg 48176061  T
Q  891 ctgag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
    || || ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  48176062 ctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaa 48176115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 798 - 916
Target Start/End: Original strand, 13577789 - 13577911
Alignment:
Q  798 ctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgctga 894  Q
    ||||||||||||| | || || |||||||||||||||||| ||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  13577789 ctaaactgcacttctcgctctctatgtttcaaaatgttgcgattttggccccctattaaaaaaatggcaattttggcccctttcatcccaaaattgctga 13577888  T
Q  895 g-agatgccacgtgtcccaaaaa 916  Q
    | ||| ||||||||| |||||||    
T  13577889 gaagacgccacgtgttccaaaaa 13577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 8527098 - 8526947
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| ||||||||| ||||  ||| |||||||||||||| ||||||| |||||||| ||||||| |||||||||||||  ||||| |||||||||||    
T  8527098 ggctaaagtgcacttttcgccccctatatttcaaaatgttgcgattttggccccctattaaaaaaatggcaattttggccctcttcatcccaaaattgct 8526999  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| |||||||||||||| ||||||  ||||||| || ||||||||||||||    
T  8526998 gagaagatgccacgtgtctcaaaaaaggggccataattgcaactttttgtaa 8526947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 796 - 941
Target Start/End: Original strand, 11843178 - 11843331
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||||||||||| | ||||  |||||||||||||||||| |||||||| |||||||  ||||||| |||||||||||||||||||| ||||||||||    
T  11843178 ggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaattttggcccctttcatcccaaaattgc 11843277  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaag 941  Q
    |||| ||| ||||||| | | |||||  ||||||| || |||||||||||||||    
T  11843278 tgagaagacgccacgtattcaaaaaaaggggccataattgcaactttttgtaag 11843331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 634 - 753
Target Start/End: Complemental strand, 17353931 - 17353812
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| ||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||        |||||||||||| |||  |||||||||||||||    
T  17353931 ggcttaaacgtactttttactctctaagtttgcaaaagttacaattttggccccctattaaaaaaaatggcaaaagtgacccctcatgtttacccccttt 17353832  T
Q  734 tgcaaaacgtcaattttgac 753  Q
    ||||||||  ||||||||||    
T  17353831 tgcaaaactccaattttgac 17353812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 42271636 - 42271484
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaa-ttttggcccctatt--aaaaaatagcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||| ||||||||| ||||  ||||||| |||||||||||| ||||| ||||||||  |||||||  ||||||||||||| ||||||| ||||||||    
T  42271636 ggctaaagtgcacttttcgccccctatgttttaaaatgttgcaatttttgccccctattaaaaaaaatgacaattttggcccccttcatccgaaaattgc 42271537  T
Q  892 tgag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
    |||| ||| ||||||||| ||  |||||||||||| |||||||||||||||||    
T  42271536 tgagaagacgccacgtgttccaaaaaaagggccataatcgcaactttttgtaa 42271484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 27869196 - 27869347
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| ||||||||| ||||  |||||||||||||||||| ||||||  |||||||| |||||||  ||||||||||| | ||||| |||||||||||    
T  27869196 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctattaaaaaaatgacaattttggcctccttcatcccaaaattgct 27869295  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||| ||||||||||||  ||||||| |||||||||||||||||    
T  27869296 gagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaa 27869347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 799 - 940
Target Start/End: Original strand, 3562436 - 3562585
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaata--gcaattttggcccctttcatcc-aaaattgctga 894  Q
    |||| ||||||||| || |  |||||||||||||||||| ||||||| |||||||||||||| |  |||||||||||||| ||||||| ||| |||||||    
T  3562436 taaagtgcacttttcgctccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaaaggcaattttggcccccttcatcctaaacttgctga 3562535  T
Q  895 g-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    | ||| ||||||||||| |||||  ||||||| |||||||||||||||||    
T  3562536 gaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaa 3562585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 2331322 - 2331165
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-------cccctattaaaaaa--tagcaattttggcccctttcatcc-aa 885  Q
    ||||||||||||||||| ||||  ||||||| ||||||||||||||||||       ||||||||||||||  ||||||||| |||||||||||||| ||    
T  2331322 ggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggttttggccccctattaaaaaaaatagcaattt-ggcccctttcatccaaa 2331224  T
Q  886 aattgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||||||||| ||| ||||| |||||||||||   |||||| |||||||||||||||||    
T  2331223 aattgctgagaagacgccacttgtcccaaaaaataggccataatcgcaactttttgtaa 2331165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 20636922 - 20636771
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||| ||||||||| ||||  |||||||||||||||||| ||||||  ||||||||  ||||||| |||||||||||||| ||||| ||||||||||    
T  20636922 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatttaaaaaaatggcaattttggcccc-ttcatcccaaaattgc 20636824  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| | | |||||||||||||||||  ||| ||| |||||||||||||||||    
T  20636823 tgagaaaacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaa 20636771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 828 - 940
Target Start/End: Original strand, 41452281 - 41452401
Alignment:
Q  828 aaaatgttgcaattttggccc-ctattaaaaaata--gcaattttggcccctttcatcc-aaaattgctgag-agatgccacgtgtcccaaaaa--gggc 920  Q
    ||||||||||||||||||||| ||||||||||| |  |||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||  |||     
T  41452281 aaaatgttgcaattttggccctctattaaaaaaaattgcaattttggcccctttcatccaaaaattgctgagaagacgacacgtgtcccaaaaaaggggt 41452380  T
Q  921 cat-atcgcaactttttgtaa 940  Q
    ||| |||||||||||||||||    
T  41452381 cataatcgcaactttttgtaa 41452401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 634 - 793
Target Start/End: Original strand, 46469141 - 46469305
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||| |||||| |||||||||||||||||||||||| ||||||||||        ||| |||| ||| |||| |||| ||||||||||    
T  46469141 ggcttaaacacactttctaccccttaagtttgcaaaagttgcaattttagccccctattaaaaaaaatggtaaaaatgaccccccatgtctacccccttt 46469240  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccat------gtggcacgccacctgtgtatttatta 793  Q
    ||| | ||||||||||||||  ||||||||  ||      ||||||||||||||||||||||||||    
T  46469241 tgc-atacgtcaattttgactaagtcaaccatatgtggcagtggcacgccacctgtgtatttatta 46469305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 24597517 - 24597667
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| ||||||||| |||   |||||||||||||||||  ||||||| |||||||| ||||||| |||||||||||||| ||||| |||||||||||    
T  24597517 ggctaaagtgcacttttcgcctcctatgtttcaaaatgttgtgattttggccccctattaaaaaaatggcaattttggcccc-ttcatcccaaaattgct 24597615  T
Q  893 gag-agatgccacgtgtcccaa--aaagggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||||||||| |||  || ||||||| |||||||||||||||||    
T  24597616 gagaagacgccacgtgtctcaaacaaggggccataatcgcaactttttgtaa 24597667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 634 - 770
Target Start/End: Original strand, 17352890 - 17353025
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||| ||||||||||||||||||||| ||||||||| |||||||        ||| |||||||| |||  |||||||||||||||    
T  17352890 ggcttaaacacactttttatcccctaagtttgcaaaagttgtaattttggcgccctatt-aaaaaaatggtaaaagtgacccctcatgtttacccccttt 17352988  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtg 770  Q
    ||||||||  ||||||||||   |||||| |||||||    
T  17352989 tgcaaaactccaattttgacttggtcaacgccatgtg 17353025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 730 - 792
Target Start/End: Original strand, 37627558 - 37627620
Alignment:
Q  730 cttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| |||||||||||||||||    
T  37627558 cttttgcaaaacgtcaattttgactcagtcaaccgtatgtggcacaccacctgtgtatttatt 37627620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 786 - 940
Target Start/End: Original strand, 10023776 - 10023936
Alignment:
Q  786 atttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctatt-aaaaaatagcaattttggcccctttcatc- 882  Q
    |||| |||| || |||||||||||||| ||||  ||| ||| |||||||||| | ||||  |||||||| |||||||  ||||||||||||||||  ||     
T  10023776 atttcttataggttaaactgcacttttcgccccctatattttaaaatgttgcgagtttgaccccctattaaaaaaatgtcaattttggccccttttgtct 10023875  T
Q  883 caaaattgctgag-agatgccacgtgtcccaaaaa-gggccata-tcgcaactttttgtaa 940  Q
    ||||||||||||| |||  |||||||||||||||| |||||||| ||||||||||||||||    
T  10023876 caaaattgctgagaagacaccacgtgtcccaaaaaggggccatattcgcaactttttgtaa 10023936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 7313063 - 7313126
Alignment:
Q  626 ttatatttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccct 689  Q
    |||| ||||||| |||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  7313063 ttatttttggcttaaactcattttttaccccttaagtttgcaaaagttgcaattttggccccct 7313126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 823 - 919
Target Start/End: Original strand, 9822129 - 9822228
Alignment:
Q  823 gtttcaaaatgttgcaattttggcc-cctattaaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaaaaggg 919  Q
    ||||||||| ||||| ||||||||| |||||||||||||  ||||||| ||||||||| | |||||||||||||| ||| |||| |||||||||||||||    
T  9822129 gtttcaaaaagttgcgattttggcctcctattaaaaaattacaattttagcccctttcgtcccaaaattgctgagaagacgccatgtgtcccaaaaaggg 9822228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 823 - 919
Target Start/End: Original strand, 10724054 - 10724153
Alignment:
Q  823 gtttcaaaatgttgcaattttggcc-cctattaaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaaaaggg 919  Q
    ||||||||| ||||| ||||||||| |||||||||||||  ||||||| ||||||||| | |||||||||||||| ||| |||| |||||||||||||||    
T  10724054 gtttcaaaaagttgcgattttggcctcctattaaaaaattacaattttagcccctttcgtcccaaaattgctgagaagacgccatgtgtcccaaaaaggg 10724153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 787 - 915
Target Start/End: Original strand, 33237407 - 33237537
Alignment:
Q  787 tttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctatt-aaaaaatagcaattttggcccctttcat-cca 884  Q
    |||||| | |||||||||| ||||||  |||| ||  ||| |||||||||| ||||||| | ||||| ||||||| |||||||||| ||||||||| |||    
T  33237407 tttattttaggctaaactgtacttttcaccctctaaattttaaaatgttgcgattttggtctctattaaaaaaattgcaattttgg-ccctttcatccca 33237505  T
Q  885 aaattgctgag-agatgccacgtgtcccaaaa 915  Q
    ||||||||||| ||| ||||||||||||||||    
T  33237506 aaattgctgagaagacgccacgtgtcccaaaa 33237537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 634 - 688
Target Start/End: Original strand, 40319551 - 40319605
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccc 688  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  40319551 ggcttaaacgcactttttaccctctaactttgcaaaagttgcaattttggccccc 40319605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 634 - 779
Target Start/End: Original strand, 47507760 - 47507903
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| ||||| |||||||||||| ||| |||| ||||||| ||||||||| ||||| ||        || ||||||||| |||  |||||||||||||||    
T  47507760 ggcttaaacgtactttttaccccttaaatttgtaaaagttacaattttggtccccttttaaaaaaaatgccaaaagtgacccc--atgtttacccccttt 47507857  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccac 779  Q
    |||||||| ||||||||||   |||||| || ||||| ||||||||    
T  47507858 tgcaaaacctcaattttgatgtagtcaagcctatgtgtcacgccac 47507903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 794 - 937
Target Start/End: Complemental strand, 15681936 - 15681785
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctatt--aaaaaatagcaattttggcccctttcat-ccaaaatt 889  Q
    ||||||||||||||||||| | ||  || ||||||||||||||| ||||||||| |||| |  |||||||  ||||||||||||||||| | ||||||||    
T  15681936 ttggctaaactgcacttttagacccctaagtttcaaaatgttgcgattttggcctcctaataaaaaaaattacaattttggcccctttcgtcccaaaatt 15681837  T
Q  890 gctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttg 937  Q
      |||| ||| |||||||||||||||||   |||||| ||||||||||||||    
T  15681836 tatgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttg 15681785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 633 - 753
Target Start/End: Complemental strand, 12385546 - 12385427
Alignment:
Q  633 tggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccctt 732  Q
    ||||| |||||||||||||||||||||||||| |||||||||  ||||||| ||||||||        || ||||||||| |||  ||||||||||||||    
T  12385546 tggcttaaacgcactttttaccccctaagtttacaaaagttgacattttgg-cccctattaaaaaaaatgacaaaagtgacccctaatgtttaccccctt 12385448  T
Q  733 ttgcaaaacgtcaattttgac 753  Q
    || |||||   ||||||||||    
T  12385447 ttacaaaattccaattttgac 12385427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 796 - 937
Target Start/End: Complemental strand, 39182237 - 39182089
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||||||||||||| ||||  || |||| |||||||||||||||||  |||||||| |||||||  ||||||||||||||||  | |||||||||||    
T  39182237 ggctaaactgcacttttcgccccctaagtttaaaaatgttgcaattttgaccccctattaaaaaaatgacaattttggccccttttgtcccaaaattgct 39182138  T
Q  893 gag-agatgccacgtgtcccaaaa-ag-ggccat-atcgcaactttttg 937  Q
    ||| | |  ||||||||||||||| || |||||| ||||||||||||||    
T  39182137 gagaaaacaccacgtgtcccaaaacagaggccataatcgcaactttttg 39182089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 634 - 774
Target Start/End: Original strand, 40659004 - 40659143
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||        || |||||||||||||  ||||||| | |||||    
T  40659004 ggcttaaacgtactttttaccccctaagtttacaaaagttgcaatttttgccccct-tttaaaaaaatgacaaaagtgatccctcatgtttagctccttt 40659102  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcac 774  Q
    || ||||  ||||||||  ||  |||||| |||||||||||    
T  40659103 tgtaaaatttcaattttagcctggtcaacaccatgtggcac 40659143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 820 - 916
Target Start/End: Complemental strand, 17306045 - 17305944
Alignment:
Q  820 tatgtttcaaaatgttgcaattttggcccctatt---aaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaa 914  Q
    ||||||| ||||||||||||||||||||||| ||   |||||||  ||||||||| ||||||||| ||||||||| |||| ||| ||||| |||||||||    
T  17306045 tatgttttaaaatgttgcaattttggcccctttttaaaaaaaatgacaattttgggccctttcatcccaaaattgatgagaagacgccacatgtcccaaa 17305946  T
Q  915 aa 916  Q
    ||    
T  17305945 aa 17305944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 796 - 915
Target Start/End: Complemental strand, 25003009 - 25002887
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccct-attaaaaaatagcaattttggcccctttcat-ccaaaattgctg 893  Q
    |||||||||| |||||| ||||  || |||| |||||||||| ||||||| |||| ||||||||||  |||||||||||||||| || ||||| |||||     
T  25003009 ggctaaactgtacttttcgccccctaagttttaaaatgttgcgattttggtcccttattaaaaaatgacaattttggccccttttatcccaaagttgcta 25002910  T
Q  894 aga-gatgccacgtgtcccaaaa 915  Q
    ||| || |||| |||||||||||    
T  25002909 agaggacgccatgtgtcccaaaa 25002887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 692
Target Start/End: Complemental strand, 40322610 - 40322552
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| ||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||    
T  40322610 ggcttaaacgcattttttaccctctaactttgtaaaagttgcaattttggccccctatt 40322552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 799 - 916
Target Start/End: Original strand, 19919607 - 19919728
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tatt-aaaaaatagcaattttggcccctttcat-ccaaaattgctgag 895  Q
    |||| ||||||||| ||||  ||| ||| |||||||||| ||||||||||| |||| ||||||| ||||||||||| || ||||| ||||||||||||||    
T  19919607 taaagtgcacttttcgccccctatattttaaaatgttgcgattttggccccttattaaaaaaatggcaattttggcacccttcatcccaaaattgctgag 19919706  T
Q  896 -agatgccacgtgtcccaaaaa 916  Q
     | | || ||||||||||||||    
T  19919707 aaaacgctacgtgtcccaaaaa 19919728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 644 - 752
Target Start/End: Complemental strand, 37628597 - 37628493
Alignment:
Q  644 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgt 743  Q
    |||||||||  |||||||||||||||||||| |||||||||||||||||        ||||||||||||   || ||||||| || |||||||||||| |    
T  37628597 cactttttaatccctaagtttgcaaaagttgtaattttggccccctatt-aaaaaaatggcaaaagtga---cccatgtttagcctcttttgcaaaacat 37628502  T
Q  744 caattttga 752  Q
    |||||||||    
T  37628501 caattttga 37628493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 823 - 916
Target Start/End: Original strand, 3403080 - 3403176
Alignment:
Q  823 gtttcaaaatgttgcaattttggcccc-tattaaaaaatagcaattttggcccctttcat-ccaaaattgctga-gagatgccacgtgtcccaaaaa 916  Q
    |||| |||||||||| |||||| |||| |||||||||||  ||||||||||||||||| | |||||||| |||| |||| ||||| |||||||||||    
T  3403080 gttttaaaatgttgcgattttgaccccctattaaaaaattacaattttggcccctttcgtcccaaaattcctgaggagacgccacatgtcccaaaaa 3403176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 849 - 915
Target Start/End: Complemental strand, 7365471 - 7365403
Alignment:
Q  849 ctattaaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaaa 915  Q
    |||||||||||| ||||||||||||| |||| | |||||||||||||| ||||| ||||||||||||||    
T  7365471 ctattaaaaaatggcaattttggcccttttcgtcccaaaattgctgagaagatgtcacgtgtcccaaaa 7365403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 854 - 940
Target Start/End: Original strand, 36746564 - 36746655
Alignment:
Q  854 aaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||||||  ||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  36746564 aaaaaatgacaattttggcccctttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaa 36746655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 647 - 779
Target Start/End: Complemental strand, 40659352 - 40659220
Alignment:
Q  647 tttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtcaa 746  Q
    |||||||| |||| ||||||||||||||||||||| ||||||| ||        |||||||||||  ||   ||||||| ||| |||||||||||  |||    
T  40659352 tttttacctcctatgtttgcaaaagttgcaattttagcccccttttaaaaaaaatggcaaaagtggcccttcatgtttagcccattttgcaaaactccaa 40659253  T
Q  747 ttttgacccagtcaaccccatgtggcacgccac 779  Q
    ||||||||  |||||| ||||||| || |||||    
T  40659252 ttttgacctggtcaacgccatgtgtcaagccac 40659220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 719 - 782
Target Start/End: Complemental strand, 5450173 - 5450110
Alignment:
Q  719 atgtttacccccttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctg 782  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||||  ||||| || ||||||||    
T  5450173 atgtttacctccttttgcaaaacctcaattttgacctagtcaaccatatgtgtcatgccacctg 5450110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 793 - 859
Target Start/End: Original strand, 17305761 - 17305828
Alignment:
Q  793 attggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||||||||| ||||||| | ||| || ||||||||||||||| ||||||| ||||||||||||||    
T  17305761 attggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 17305828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 791 - 896
Target Start/End: Original strand, 24448040 - 24448146
Alignment:
Q  791 ttattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaatagcaattttggcccctttc-atccaaaat 888  Q
    |||| ||||||||||||||||| ||||   | |||| |||||||||| ||||||  ||||||||||||||| || ||||||| |||||||  ||||||||    
T  24448040 ttataggctaaactgcacttttcgccccccaagttttaaaatgttgcgattttgatcccctattaaaaaat-gcgattttggtccctttcgttccaaaat 24448138  T
Q  889 tgctgaga 896  Q
    ||||||||    
T  24448139 tgctgaga 24448146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 634 - 692
Target Start/End: Original strand, 12384093 - 12384151
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| ||||||||| |||||||||||||||||||||||| | |||||||| | ||||||    
T  12384093 ggcttaaacgcactatttaccccctaagtttgcaaaagtagtaattttggtctcctatt 12384151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 794 - 859
Target Start/End: Complemental strand, 36746808 - 36746743
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||||| ||||||| |||| | |||||| |||||||||||||||||| ||||||||||||||    
T  36746808 ttggctaaactacacttttcgcccct-atgttttaaaatgttgcaattttggccccctattaaaaaa 36746743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 798 - 859
Target Start/End: Original strand, 39181939 - 39182001
Alignment:
Q  798 ctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctattaaaaaa 859  Q
    |||||||||||||||||||||  | |||| |||||||||| ||||||||| ||||||||||||    
T  39181939 ctaaactgcacttttggccctccaagttttaaaatgttgcgattttggcctcctattaaaaaa 39182001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 814 - 916
Target Start/End: Original strand, 9157049 - 9157154
Alignment:
Q  814 gccctttatgtttcaaaatgttgcaattttggcccctatt-aaaaaatagcaattttggcccctttcatc-caaaattgctgag-agatgccacgtgtcc 910  Q
    ||||| || |||| |||||||||| ||||||||||||||| |||||||  ||||||||| | ||||| || ||||||||||||| ||| | || ||||||    
T  9157049 gccctctaggttttaaaatgttgcgattttggcccctattaaaaaaatgacaattttggtctctttcgtctcaaaattgctgagaagacgtcatgtgtcc 9157148  T
Q  911 caaaaa 916  Q
    ||||||    
T  9157149 caaaaa 9157154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 796 - 865
Target Start/End: Original strand, 14624608 - 14624677
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaatagcaa 865  Q
    ||||||||| ||||||| | ||  || |||||||||| |||| |||||||||||||||||||||| ||||    
T  14624608 ggctaaactacacttttcgtcccctaagtttcaaaatattgcgattttggcccctattaaaaaatggcaa 14624677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 787 - 859
Target Start/End: Original strand, 20636610 - 20636683
Alignment:
Q  787 tttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||| | ||||||||| ||||||| ||||| || |||| |||||||||| ||||||| ||||||||||||||    
T  20636610 tttattttaggctaaacttcactttttgccctctaagttttaaaatgttgcgattttggccccctattaaaaaa 20636683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 787 - 859
Target Start/End: Original strand, 20638482 - 20638555
Alignment:
Q  787 tttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||| | ||||||||| ||||||| ||||| || |||| |||||||||| ||||||| ||||||||||||||    
T  20638482 tttattttaggctaaacttcactttttgccctctaagttttaaaatgttgcgattttggccccctattaaaaaa 20638555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 796 - 919
Target Start/End: Complemental strand, 42303450 - 42303322
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggccc-ctatt--aaaaaatagcaattttggcccctttcatc-caaaattgc 891  Q
    ||||||||||||||| | | ||  || ||||||||| ||||| ||||||| || |||||  |||||||  ||||||||||||||||  || |||||||||    
T  42303450 ggctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttaaaaaaatgacaattttggccccttttgtctcaaaattgc 42303351  T
Q  892 tgaga-gatgccacgtgtcccaaaaaggg 919  Q
    ||||| ||  |||||||||||||||||||    
T  42303350 tgagaagacaccacgtgtcccaaaaaggg 42303322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 19919905 - 19919841
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| ||||||  ||||||||||||||    
T  19919905 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaa 19919841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 21690416 - 21690480
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaa 859  Q
    ||||||||| ||||||| | ||  ||||||||||||| |||||||||||||||| ||||||||||    
T  21690416 ggctaaactacacttttcgtcccctatgtttcaaaatcttgcaattttggccccttattaaaaaa 21690480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 632 - 692
Target Start/End: Complemental strand, 37918581 - 37918521
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||||| |||||||||||||| |   ||| |||||||||||||||||||| ||||||||||    
T  37918581 ttggcttaaacgcactttttatcttttaaatttgcaaaagttgcaattttagccccctatt 37918521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 797 - 859
Target Start/End: Original strand, 2331015 - 2331078
Alignment:
Q  797 gctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaa 859  Q
    |||||||| ||||||| | ||| || |||| |||||||||||||||||||||| ||||||||||    
T  2331015 gctaaacttcacttttcgtcctctaagttttaaaatgttgcaattttggccccttattaaaaaa 2331078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 689
Target Start/End: Complemental strand, 5490979 - 5490924
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccct 689  Q
    |||| ||| |||||||| |||||||| ||||  |||||||||||||||||||||||    
T  5490979 ggcttaaatgcacttttcaccccctatgtttcaaaaagttgcaattttggccccct 5490924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 836 - 912
Target Start/End: Original strand, 18754306 - 18754387
Alignment:
Q  836 gcaattttggcccc-tattaaaa--aatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtccca 912  Q
    |||||||||||||| ||||||||  ||||||||||||| |||||||||| ||||||||| | || |||| ||||||||||||    
T  18754306 gcaattttggccccctattaaaaaaaatagcaattttgacccctttcatcccaaaattgatcagaagataccacgtgtccca 18754387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 794 - 859
Target Start/End: Complemental strand, 19195519 - 19195453
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaa 859  Q
    ||||||||||| |||||||  |||| || |||| |||||||||||||||||  ||||||||||||||    
T  19195519 ttggctaaacttcacttttcaccctctaagttttaaaatgttgcaattttgaccccctattaaaaaa 19195453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 794 - 859
Target Start/End: Complemental strand, 24597821 - 24597755
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaa 859  Q
    ||||||||||| ||||||| ||||| || |||| |||||||||| ||||||  ||||||||||||||    
T  24597821 ttggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgtccccctattaaaaaa 24597755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 786 - 856
Target Start/End: Original strand, 25002701 - 25002771
Alignment:
Q  786 atttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaa 856  Q
    ||||| |||| |||||||||||||||| |  |  || ||||||||||||||  ||||||||||||||||||    
T  25002701 atttaatattagctaaactgcacttttcgtgccctaagtttcaaaatgttgtgattttggcccctattaaa 25002771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 790 - 859
Target Start/End: Complemental strand, 27869505 - 27869435
Alignment:
Q  790 attattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||| || |||||| ||||||| ||||| || ||||||||||||||| |||||||  |||||||||||||    
T  27869505 attataggttaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggagccctattaaaaaa 27869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 634 - 692
Target Start/End: Original strand, 35959081 - 35959139
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| |||| |||||||  ||||||||||||||||| ||||||||||||| ||| ||||    
T  35959081 ggcttaaactcacttttcgccccctaagtttgcaaaggttgcaattttggtcccttatt 35959139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 794 - 859
Target Start/End: Original strand, 42271331 - 42271397
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctattaaaaaa 859  Q
    ||||||||| | || |||| ||||| || ||||||||||||||| ||||||||| ||||||||||||    
T  42271331 ttggctaaatttcatttttcgccctctaagtttcaaaatgttgcgattttggcctcctattaaaaaa 42271397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 692
Target Start/End: Original strand, 8955969 - 8956030
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    ||||||| |||| ||||||| ||||||||| |||  |||||| || ||||||||||||||||    
T  8955969 tttggcttaaacccacttttgaccccctaaatttaaaaaagtagcgattttggccccctatt 8956030  T

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Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 795 - 859
Target Start/End: Original strand, 10655329 - 10655394
Alignment:
Q  795 tggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaa 859  Q
    |||||||||| ||||||| ||||  || |||| ||||||||||| |||||||||| ||||||||||    
T  10655329 tggctaaactccactttttgccccctaagttttaaaatgttgcagttttggccccttattaaaaaa 10655394  T

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Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 799 - 859
Target Start/End: Complemental strand, 18754567 - 18754506
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||| ||||||| ||||  || ||||||||||||||| ||||||| ||||||||||||||    
T  18754567 taaactccacttttcgccccctaagtttcaaaatgttgcgattttggtcccctattaaaaaa 18754506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 849
Target Start/End: Complemental strand, 21224656 - 21224603
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc 849  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| |||||| ||||    
T  21224656 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgacccc 21224603  T

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Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 843
Target Start/End: Original strand, 23080816 - 23080865
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaatttt 843  Q
    ||||||||||||||||||| |||| ||| |||||||||| |||| |||||    
T  23080816 ttggctaaactgcactttttgccccttaagtttcaaaatattgcgatttt 23080865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 113; Significance: 1e-56; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 634 - 795
Target Start/End: Original strand, 268411 - 268571
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||    
T  268411 ggctaaaacgcactttttacctcttaagtttgcaaaagttgcaattttggccccctattaaaaaaa-tggcaaaagtgatcccctatgtctacccccttt 268509  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttattatt 795  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  268510 tgcaaaacgtcaattttgactcagtcaaccctatgtggcacgccacctgtgtatttattatt 268571  T

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Target: chr4 (Bit Score: 111; Significance: 2e-55; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 634 - 792
Target Start/End: Complemental strand, 1961228 - 1961070
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||| |||    
T  1961228 ggctaaagtgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgatcccctatgtctacccctttt 1961129  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  1961128 tgcaaaacgtcaattttgactcagtcaaccctatgtggcacgccacctgtgtatttatt 1961070  T

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Target: chr4; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 639 - 792
Target Start/End: Original strand, 6047068 - 6047220
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaa 738  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||| ||| | | ||||| || ||||||||||||    
T  6047068 aaacccactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaaatgacctcttatgtcta-ccccttttgcaa 6047166  T
Q  739 aacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    ||||||||||||||| |||||||||  |||||||| ||||||||||||||||||    
T  6047167 aacgtcaattttgactcagtcaaccgtatgtggcatgccacctgtgtatttatt 6047220  T

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Target: chr4; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 634 - 793
Target Start/End: Complemental strand, 10616146 - 10615987
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||| |||||||||| ||||||||||||||||||||| |||||||||        |||||||||||| | || |||| ||||||||||    
T  10616146 ggcttaaacacactttctaccccctaaatttgcaaaagttgcaattttgaccccctattaaaaaaaatggcaaaagtgacctcccatgtctacccccttt 10616047  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatta 793  Q
    ||||||||||||||||||||  ||||||||  ||||||||||||||| ||||||||||||    
T  10616046 tgcaaaacgtcaattttgactaagtcaaccatatgtggcacgccacccgtgtatttatta 10615987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 15058820 - 15058970
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaa-atagcaattttggcccctttcat-ccaaaattgctg 893  Q
    ||||||| ||||||||||||||  |||||||||||||||||| |||||||||||||||||||| || |||| ||||||||||||||| ||||||||||||    
T  15058820 ggctaaagtgcacttttggccccctatgtttcaaaatgttgcgattttggcccctattaaaaatatggcaactttggcccctttcatcccaaaattgctg 15058919  T
Q  894 ag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    || ||| |||||||||||||||||  |||| || |||||||||||||||||    
T  15058920 agaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaa 15058970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 796 - 916
Target Start/End: Complemental strand, 25012038 - 25011914
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttca-tccaaaattgct 892  Q
    ||||||||||||||||| ||||  ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  25012038 ggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggccccctattaaaaaaatagcaattttggcccctttcattccaaaattgct 25011939  T
Q  893 gag-agatgccacgtgtcccaaaaa 916  Q
     || |||||||||||||||||||||    
T  25011938 cagaagatgccacgtgtcccaaaaa 25011914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 631 - 786
Target Start/End: Complemental strand, 56113816 - 56113661
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccc 730  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||  | |||| |||||| |||||    
T  56113816 tttggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagctaccccccatgttttccccc 56113717  T
Q  731 ttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgta 786  Q
    |||| ||||||||| ||||||||| |||||| |  |||||||| ||||| ||||||    
T  56113716 ttttacaaaacgtcgattttgaccgagtcaatcatatgtggcatgccacatgtgta 56113661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 634 - 781
Target Start/End: Complemental strand, 34370823 - 34370676
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||||||| ||||        |||||||||||| ||| |||||||| ||||||     
T  34370823 ggctaaaacgcaccttttgccccctaagtttacaaaagttgcaattttggccccttattaaaaaaattggcaaaagtgaccccttatgtttagccccttc 34370724  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacct 781  Q
    |||||||  ||||||||||||||||||| || ||||| || |||||||    
T  34370723 tgcaaaatctcaattttgacccagtcaatcctatgtgtcatgccacct 34370676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 634 - 789
Target Start/End: Original strand, 56112695 - 56112850
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||        |||||||||  | |||| |||||| ||||||||    
T  56112695 ggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttagccccctattaaaaaaaatggcaaaagctaccccccatgttttcccccttt 56112794  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    | ||||||||| ||||||||| ||||| ||  |||||||| |||||||| ||||||    
T  56112795 ttcaaaacgtcgattttgaccgagtcagccatatgtggcatgccacctgggtattt 56112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 639 - 789
Target Start/End: Original strand, 40841998 - 40842148
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaa 738  Q
    |||| ||||||| |||| ||||||||||||||||||||||||||| ||||| ||        |||||||||||| |||||||||||||||| ||||||||    
T  40841998 aaacacacttttcaccctctaagtttgcaaaagttgcaattttggtccccttttaaaaaaaatggcaaaagtgaccccctatgtttacccctttttgcaa 40842097  T
Q  739 aacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    ||| ||||||||||| ||||||||   ||||| || ||||||| |||||||    
T  40842098 aacctcaattttgactcagtcaactatatgtgtcatgccacctatgtattt 40842148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 794 - 940
Target Start/End: Original strand, 13397673 - 13397827
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaa--aatagcaattttggcccctttcatcc-aaaatt 889  Q
    ||||||||| ||||||||| ||||  ||||||| |||||||||| ||||| ||||| ||||||||  |||||||||||||||||| ||||||| ||||||    
T  13397673 ttggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttagccccctattaaaaaaaatagcaattttggcccccttcatccgaaaatt 13397772  T
Q  890 gctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  13397773 gctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 13397827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 791 - 940
Target Start/End: Original strand, 5304342 - 5304499
Alignment:
Q  791 ttattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggccc-ctatt--aaaaaatagcaattttggcccctttcatc-caaa 886  Q
    |||||||||||| ||||||||| ||||  ||||||||||||||||   |||||||||| |||||  ||||||| |||||||||||||| |||||| ||||    
T  5304342 ttattggctaaagtgcacttttcgccccctatgtttcaaaatgttttgattttggccctctattaaaaaaaatggcaattttggcccccttcatcgcaaa 5304441  T
Q  887 attgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||||||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  5304442 attgctgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaa 5304499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 13826420 - 13826571
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaa-tagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| ||||||||| ||||  ||||||| |||||||||| |||||| |||| |||||||||| | |||||||||||||||||||| |||||||||||    
T  13826420 ggctaaagtgcacttttcgccccctatgtttaaaaatgttgcgattttgaccccctattaaaaaaatggcaattttggcccctttcatcccaaaattgct 13826519  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||||||||||||||||  |||| || |||||||||||||||||    
T  13826520 gagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaa 13826571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 820 - 940
Target Start/End: Original strand, 25618652 - 25618779
Alignment:
Q  820 tatgtttcaaaatgttgcaattttgg-cccctattaaaa--aatagcaattttggcccctttcatcc-aaaattgctgag-agatgccacgtgtcccaaa 914  Q
    ||||||||||||||||| |||||||| ||||||||||||  |||||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||    
T  25618652 tatgtttcaaaatgttgtaattttggtcccctattaaaaaaaatagcaattttggtccctttcatccaaaaattgctgagaagacgccacgtgtcccaaa 25618751  T
Q  915 aa-gggccat-atcgcaactttttgtaa 940  Q
    || ||||||| ||||| |||||||||||    
T  25618752 aaggggccataatcgccactttttgtaa 25618779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 634 - 736
Target Start/End: Original strand, 1960895 - 1960997
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||        |||||||||||||||||||||| |||||| |||    
T  1960895 ggctaaaacgcactttttacccattaagtttgcaaaagttgcaattttggcaccctattaaaaaaaatggcaaaagtgatcccctatgtctacccctttt 1960994  T
Q  734 tgc 736  Q
    |||    
T  1960995 tgc 1960997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 19232343 - 19232495
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctattaaaa--aatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||| ||||||||  ||||  ||||||| | |||||||||||||||||| ||||||||||  |||||||||||||||||||||||| ||||||||||    
T  19232343 ggctaaagtgcactttccgccccctatgttttataatgttgcaattttggcctcctattaaaaaaaatagcaattttggcccctttcatcccaaaattgc 19232442  T
Q  892 tgag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
    | || ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  19232443 tcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaa 19232495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 43793631 - 43793783
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||||||||||||| ||||  ||||||| |||||||||| ||||||| ||||||||  ||||||| ||||||||||||| |||| | ||||||||||    
T  43793631 ggctaaactgcacttttcgccccctatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccatttcgtcccaaaattgc 43793730  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccata-tcgcaactttttgtaa 940  Q
    |||| ||| ||||| |||||||||||  ||| |||| ||||||||||||||||    
T  43793731 tgagaagacgccacatgtcccaaaaaaggggtcatattcgcaactttttgtaa 43793783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 639 - 792
Target Start/End: Original strand, 46170304 - 46170454
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaa 738  Q
    |||| ||||||||||| |||||||||||  ||||||||||||||| ||| ||||        |||||||||||| |||  |||| ||||| |||||||||    
T  46170304 aaacccactttttacctcctaagtttgcggaagttgcaattttggtccc-tattaaaaaaaatggcaaaagtgacccc--atgtctaccctcttttgcaa 46170400  T
Q  739 aacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    ||||||||||||||| |||||||||  |||||||| | ||| ||||||||||||    
T  46170401 aacgtcaattttgactcagtcaaccgtatgtggcatgtcacttgtgtatttatt 46170454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 639 - 753
Target Start/End: Complemental strand, 52035203 - 52035089
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaa 738  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||||||||||        |||||||| ||| |||  ||||||| ||||||||||||    
T  52035203 aaacccactttttaccccttaaatttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaaatgacccctcatgtttagccccttttgcaa 52035104  T
Q  739 aacgtcaattttgac 753  Q
    ||| |||||||||||    
T  52035103 aacctcaattttgac 52035089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 797 - 916
Target Start/End: Original strand, 41877030 - 41877153
Alignment:
Q  797 gctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctatt--aaaaaatagcaattttggcccctttcatc-caaaattgctg 893  Q
    |||||||||||||||| |||| |||||||| ||||||||||| ||||| || |||||  ||||||||| |||||||||||||||||||  ||||||||||    
T  41877030 gctaaactgcacttttcgccccttatgttttaaaatgttgcagttttgtcctctattaaaaaaaatagtaattttggcccctttcatcaaaaaattgctg 41877129  T
Q  894 -agagatgccacgtgtcccaaaaa 916  Q
     | ||| ||||||||||| |||||    
T  41877130 aaaagacgccacgtgtcctaaaaa 41877153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 820 - 941
Target Start/End: Complemental strand, 27018494 - 27018365
Alignment:
Q  820 tatgtttcaaaatgttgcaattttggcccc-tattaaaaaata--gcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaa 914  Q
    |||||||||||||||||| |||||| |||| |||||||||| |  ||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||    
T  27018494 tatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccatttcatcccaaaattgctgagaagacgccacgtgtcccaaa 27018395  T
Q  915 aa--gggccat-atcgcaactttttgtaag 941  Q
    ||  ||||||| || |||||||||||||||    
T  27018394 aaaggggccataattgcaactttttgtaag 27018365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 795 - 916
Target Start/End: Complemental strand, 35475593 - 35475468
Alignment:
Q  795 tggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccct--attaaaaaatagcaattttggcccctttcatcc-aaaattgc 891  Q
    |||||||||||||||||| | ||  ||||||| |||||||||| ||||||| ||||  || |||||||  |||||||||||| |||||||| ||||||||    
T  35475593 tggctaaactgcactttttgtcccctatgttttaaaatgttgcgattttggtcccttaataaaaaaatgacaattttggcccatttcatcctaaaattgc 35475494  T
Q  892 tgag-agatgccacgtgtcccaaaaa 916  Q
    |||| ||| |||||||||||||||||    
T  35475493 tgagaagacgccacgtgtcccaaaaa 35475468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 799 - 940
Target Start/End: Complemental strand, 4357552 - 4357404
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctatt-aaaaaatagcaattttggcccctttca-tccaaaattgctgag 895  Q
    |||| ||||||||| ||||  ||| |||||||||||||| ||||||  |||||||| ||||||| |||||||||||||| |||| || ||||||||||||    
T  4357552 taaagtgcacttttcgccccctatatttcaaaatgttgcgattttgaccccctattaaaaaaatggcaattttggcccccttcattctaaaattgctgag 4357453  T
Q  896 -agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
     ||| |||| |||||||  |||||||||||| |||||||||||||||||    
T  4357452 aagacgccaggtgtcccaaaaaaagggccataatcgcaactttttgtaa 4357404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 794 - 916
Target Start/End: Original strand, 13394534 - 13394661
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaatag--caattttggcccctttcatcc-aaaatt 889  Q
    ||||||||| ||||||||| ||||  ||||||| |||||||||| ||||| ||||| |||||||||| |   ||||||||||||| ||||||| ||||||    
T  13394534 ttggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttagccccctattaaaaaaaatgacaattttggcccccttcatccgaaaatt 13394633  T
Q  890 gctgag-agatgccacgtgtcccaaaaa 916  Q
    |||||| ||| |||||||||||||||||    
T  13394634 gctgagaagacgccacgtgtcccaaaaa 13394661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 634 - 793
Target Start/End: Complemental strand, 2421028 - 2420871
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||| |||||  ||||||||||||||||||||||||  |||| ||||         || |||||||| |||| |||| ||||||||||    
T  2421028 ggcttaaacacactttctaccctttaagtttgcaaaagttgcaattttaaccccttattaaaaaaaa-ggtaaaagtgaccccccatgtctacccccttt 2420930  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatta 793  Q
    |||| |  ||||||||||||  ||||||||  ||||||||||||||||||||||||||||    
T  2420929 tgcatat-gtcaattttgactaagtcaaccatatgtggcacgccacctgtgtatttatta 2420871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 754
Target Start/End: Original strand, 52034157 - 52034272
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaa 738  Q
    |||| ||||||||| ||| |||||||||||||| ||||||||||||||||||||        || ||||||||| ||| |||||| |  |||||||||||    
T  52034157 aaacccactttttatcccttaagtttgcaaaagctgcaattttggccccctattaaaaaaaatgacaaaagtgaccccttatgttcagtcccttttgcaa 52034256  T
Q  739 aacgtcaattttgacc 754  Q
    ||| ||||||||||||    
T  52034257 aacctcaattttgacc 52034272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 634 - 779
Target Start/End: Complemental strand, 18704467 - 18704321
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt-nnnnnnnntggcaaaagtgatcccctatgtttaccccctt 732  Q
    |||| ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||         |||||||| ||| |||  |||||| |||||||    
T  18704467 ggcttaaacgcactatttaccccctaattttgcaaaagtagcaattttggccccatattaaaaaaaaatggcaaaaatgacccctcatgtttgccccctt 18704368  T
Q  733 ttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccac 779  Q
    ||||||||| |||||||||||  |||||| || ||||| || |||||    
T  18704367 ttgcaaaacctcaattttgacttagtcaagcctatgtgtcatgccac 18704321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 644 - 754
Target Start/End: Complemental strand, 40874104 - 40873995
Alignment:
Q  644 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgt 743  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||        ||||||||| || |||| |||||||||||||||| |||||| |    
T  40874104 cacttttcaccccctaagtttgcaaaagttgcaattttggctacctattaaaaaaaatggcaaaagcga-cccccatgtttacccccttttacaaaacct 40874006  T
Q  744 caattttgacc 754  Q
    ||| |||||||    
T  40874005 caactttgacc 40873995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 796 - 887
Target Start/End: Complemental strand, 2931623 - 2931530
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctattaa-aaaatagcaattttggcccctttcatccaaaa 887  Q
    ||||||||||||||||| ||||  ||||||| ||||||||| ||||||  || |||||||| ||||||| ||||||||||||||||||||||||    
T  2931623 ggctaaactgcacttttcgccccctatgttttaaaatgttgtaattttaacctcctattaagaaaatagtaattttggcccctttcatccaaaa 2931530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 703 - 763
Target Start/End: Complemental strand, 31183902 - 31183843
Alignment:
Q  703 gcaaaagtgatcccctatgtttacccccttttgcaaaacgtcaattttgacccagtcaacc 763  Q
    |||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  31183902 gcaaaagtgaccccc-atgtttacccccttttgcaaaacatcaattttgacccagtcaacc 31183843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 633 - 692
Target Start/End: Original strand, 34369663 - 34369722
Alignment:
Q  633 tggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||  |||||||||    
T  34369663 tggctaaaacgcactttttgccccctaagtttgcaaaagttgtaatttttaccccctatt 34369722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 798 - 916
Target Start/End: Complemental strand, 41034936 - 41034815
Alignment:
Q  798 ctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa--tagcaattttggcccctttcatccaaaattgctga 894  Q
    |||||||| |||||| | ||  ||| ||| |||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||||||| | ||    
T  41034936 ctaaactgtacttttcgtcccctatattttaaaatgttgcaattttggtcccctattaaaaaaaatagcaattttggcccctttcat-caaaattaccga 41034838  T
Q  895 g-agatgccacgtgtcccaaaaa 916  Q
    | ||| ||||||||| |||||||    
T  41034837 gaagacgccacgtgttccaaaaa 41034815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 794 - 916
Target Start/End: Complemental strand, 45633742 - 45633616
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaata--gcaattttggcccctttcat-ccaaaatt 889  Q
    |||||| |||| ||||||| |||||||| |||| |||||||||| ||||| ||||| |||||||||| |  |||||||||||||||||  | ||||||||    
T  45633742 ttggcttaacttcacttttcgccctttaagttttaaaatgttgcgattttagccccctattaaaaaaaattgcaattttggccccttttgtcccaaaatt 45633643  T
Q  890 gctgagagatgccacgtgtcccaaaaa 916  Q
    | ||||| | ||||||||||| |||||    
T  45633642 gttgagaaacgccacgtgtcctaaaaa 45633616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 634 - 692
Target Start/End: Complemental strand, 18705451 - 18705393
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  18705451 ggcttaaacgcactatttaccccctaagtttgcaaaagtagcaattttgaccccctatt 18705393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 753
Target Start/End: Complemental strand, 18667376 - 18667255
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccct 731  Q
    |||||| ||||  |||||||||||  || ||||||||||||||||||||||||||||| ||        |||||||||||| || | || ||| ||||||    
T  18667376 ttggcttaaacatactttttaccctttatgtttgcaaaagttgcaattttggcccccttttaaaaaaaatggcaaaagtgaccctccatattttccccct 18667277  T
Q  732 tttgcaaaacgtcaattttgac 753  Q
    || ||||||| |||||||||||    
T  18667276 ttagcaaaacctcaattttgac 18667255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 634 - 734
Target Start/End: Original strand, 18703217 - 18703318
Alignment:
Q  634 ggctaaaacgcactttttacccc-ctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccctt 732  Q
    |||| |||| ||||||||||||| ||||||||||||| |||||||||||||||| |||||        |||||||||||| |||  ||||||||||||||    
T  18703217 ggcttaaacacactttttacccccctaagtttgcaaacgttgcaattttggccctctattaaaaaaaatggcaaaagtgacccctaatgtttaccccctt 18703316  T
Q  733 tt 734  Q
    ||    
T  18703317 tt 18703318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 623 - 692
Target Start/End: Complemental strand, 22813356 - 22813287
Alignment:
Q  623 attttatatttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||||||||| |||| |||| ||||||| ||| | |||||||||||||||||||||||||| ||||||||    
T  22813356 attttatattaggcttaaacccacttttgacctcttaagtttgcaaaagttgcaattttggtcccctatt 22813287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 763
Target Start/End: Original strand, 31182622 - 31182747
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnn-tggcaaaagtgatcccctatgtttacccccttttgca 737  Q
    |||| ||||||||| |||||||||||| |||||||| |||||||| ||||| ||         |||||||||||| ||   |||||||||||||| ||||    
T  31182622 aaacacactttttaacccctaagtttgtaaaagttgtaattttggtccccttttaaaaaaaaatggcaaaagtgacccttcatgtttacccccttctgca 31182721  T
Q  738 aaacgtcaattttgacccagtcaacc 763  Q
    ||||  ||||||||||||||||||||    
T  31182722 aaaccccaattttgacccagtcaacc 31182747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 796 - 910
Target Start/End: Original strand, 4433183 - 4433302
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||||||||||||| ||||  ||||||||| |||||||| ||||||||||| ||||  |||||| |||||||||| ||  |||||| ||||||||||    
T  4433183 ggctaaactgcacttttcgccccctatgtttcataatgttgcgattttggccccttattaaaaaaaaaagcaattttgacctatttcatcccaaaattgc 4433282  T
Q  892 tga-gagatgccacgtgtcc 910  Q
    | |  |||||||||||||||    
T  4433283 tcataagatgccacgtgtcc 4433302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 786 - 865
Target Start/End: Complemental strand, 41877338 - 41877258
Alignment:
Q  786 atttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctattaaaaaatagcaa 865  Q
    ||||||| | ||||||||| ||||||| ||||| || ||||||||||||||| |||||||| |||||||||||||| ||||    
T  41877338 atttattttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggctccctattaaaaaatggcaa 41877258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 632 - 779
Target Start/End: Complemental strand, 49700776 - 49700631
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccct 731  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||||||| |  |||| ||        |||||||||||  ||   ||||||| |||||    
T  49700776 ttggcttaaacacactttttaccccctatgtttgcaaaagttgcaattttag--ccctttttaaaaaaatggcaaaagtggcccatcatgtttagcccct 49700679  T
Q  732 tttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccac 779  Q
    ||||||||||  |||||||||||  |||||| ||||||| || |||||    
T  49700678 tttgcaaaactccaattttgacctcgtcaacgccatgtgtcaagccac 49700631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 634 - 689
Target Start/End: Original strand, 10614803 - 10614858
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccct 689  Q
    |||| |||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  10614803 ggcttaaacgcacattttgccctctaagtttgcaaaagttgcaattttggccccct 10614858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 24626222 - 24626285
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    ||||||||||||||||| ||||| || |||| |||||||||| |||||| ||||||||||||||    
T  24626222 ggctaaactgcacttttcgccctctaagttttaaaatgttgcgattttgacccctattaaaaaa 24626285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 1588415 - 1588565
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tatt-aaaaaatagcaattttggcccctttc-atccaaaattgct 892  Q
    ||||||| |||| |||| | ||||||||||| ||||| |||| |||||| |||| |||| ||||||| ||||||||||||| ||||  ||||||| ||||    
T  1588415 ggctaaattgcatttttcgtcctttatgttttaaaatattgcgattttgcccccttattaaaaaaatggcaattttggcccttttctttccaaaactgct 1588514  T
Q  893 gag-agatgccacgtgtcccaaaaag-ggccat-atcgcaactttttgtaa 940  Q
     || ||| | |||||||||||||||| ||| || |||||||||||||||||    
T  1588515 aagaagacgtcacgtgtcccaaaaagaggctataatcgcaactttttgtaa 1588565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 794 - 916
Target Start/End: Complemental strand, 4098962 - 4098836
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggccc-ctattaaaaaatagc-aattttggcccctttcatcc-aaaattg 890  Q
    ||||||||||||||||||| | ||| || |||| |||||||||| |||||||||| ||||||||||||    |||| ||||||||||| ||| |||||||    
T  4098962 ttggctaaactgcactttttgacctctaagttttaaaatgttgcgattttggccctctattaaaaaatttataattatggcccctttcgtcccaaaattg 4098863  T
Q  891 ctgaga-gatgccacgtgtcccaaaaa 916  Q
      |||| || |||||||||||||||||    
T  4098862 acgagaagacgccacgtgtcccaaaaa 4098836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 763
Target Start/End: Original strand, 40872955 - 40873085
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt-nnnnnnnntggcaaaagtgatcccctatgtttaccccctt 732  Q
    |||| |||| ||||||| ||||||||||||||||||||||| ||||||| |  ||||||         |||||||||||| |||  ||||||| ||| ||    
T  40872955 ggcttaaacccacttttcaccccctaagtttgcaaaagttgtaattttgacttcctattaaaaaaaaatggcaaaagtgaaccctcatgtttaacccatt 40873054  T
Q  733 ttgcaaaacgtcaattttgacccagtcaacc 763  Q
    ||||||||| ||||||||||||  |||||||    
T  40873055 ttgcaaaacctcaattttgacctggtcaacc 40873085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 796 - 936
Target Start/End: Complemental strand, 47869957 - 47869811
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| |||| |||| ||||  ||| |||||||||||||  ||||||| |||||||| ||||||| |||||| ||||| | ||||| |||||||||||    
T  47869957 ggctaaagtgcaatttttgccccctatatttcaaaatgttgtgattttggccccctattaaaaaaatggcaattctggcctccttcatcccaaaattgct 47869858  T
Q  893 gag-agatgccacgtg-tcccaaaaagggccat-atcgcaacttttt 936  Q
    ||| ||| |||||||| ||| |||||||| ||| |||||||||||||    
T  47869857 gagaagacgccacgtgttccaaaaaagggtcataatcgcaacttttt 47869811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 796 - 849
Target Start/End: Complemental strand, 6789262 - 6789209
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc 849  Q
    ||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||    
T  6789262 ggctaaacttcacttttcgccctttaagtttcaaaatgttgcgattttggcccc 6789209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 796 - 883
Target Start/End: Original strand, 9195662 - 9195753
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tatt---aaaaaatagcaattttggcccctttcatcc 883  Q
    ||||||| ||||||||| ||||  ||||||||| ||| |||| ||||||||||| ||||   |||||||||||||||| |||||||||||||    
T  9195662 ggctaaagtgcactttttgccccctatgtttcataatattgcgattttggccccttatttaaaaaaaatagcaatttttgcccctttcatcc 9195753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 634 - 687
Target Start/End: Original strand, 34155898 - 34155951
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggcccc 687  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  34155898 ggcttaaacacactttttaccccctaagtttacaaaagttgcaattttagcccc 34155951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 13397979 - 13397915
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || |||||||||| |||||||||||| ||||||||||||||    
T  13397979 ggctaaacttcacttttcgccctctaagtttcaaaatattgcaattttggccccctattaaaaaa 13397915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 645 - 781
Target Start/End: Original strand, 39701534 - 39701669
Alignment:
Q  645 actttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtc 744  Q
    |||||| |||| |||||||| ||||| |||||||||||||||| | ||        ||| |||||||| || | ||||||| |||||||| |||||| ||    
T  39701534 acttttcacccactaagttttcaaaaattgcaattttggcccctt-ttaaaaaaaatggtaaaagtgaccctccatgtttagccccttttacaaaacctc 39701632  T
Q  745 aattttgacccagtcaaccccatgtggcacgccacct 781  Q
    |||||||||||| |||| || ||||| || |||||||    
T  39701633 aattttgacccaatcaatcctatgtgtcatgccacct 39701669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 682
Target Start/End: Complemental strand, 39702718 - 39702670
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttg 682  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||||    
T  39702718 ggctaaaacgcactttttgcccgttaagtttgcaaaagttgcaattttg 39702670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 794 - 859
Target Start/End: Original strand, 4357250 - 4357316
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctattaaaaaa 859  Q
    ||||||||||| ||||||| ||||| || ||||||||||||||| ||||| || |||||||||||||    
T  4357250 ttggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttagctccctattaaaaaa 4357316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 793 - 859
Target Start/End: Complemental strand, 4433488 - 4433423
Alignment:
Q  793 attggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    |||||||||||| ||||||| |||| | | |||| |||||||||| |||||||||||||||||||||    
T  4433488 attggctaaacttcacttttcgcccctaa-gttttaaaatgttgcgattttggcccctattaaaaaa 4433423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 820 - 916
Target Start/End: Original strand, 6788982 - 6789083
Alignment:
Q  820 tatgtttcaaaatgttgcaattttggcccc-tattaaaaaata--gcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaa 914  Q
    ||||||| ||||| |||| |||||| |||| |||||||||| |  |||||||||||||| ||||| ||||||||||| || ||| |||||||||||||||    
T  6788982 tatgttttaaaatattgcgattttgtccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgctaagaagacgccacgtgtcccaaa 6789081  T
Q  915 aa 916  Q
    ||    
T  6789082 aa 6789083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 634 - 692
Target Start/End: Original strand, 22812633 - 22812691
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| |||| ||||||| ||||| |||||||||||||||||||||||||  ||||||||    
T  22812633 ggcttaaacccacttttgaccccttaagtttgcaaaagttgcaattttgatcccctatt 22812691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 793 - 859
Target Start/End: Original strand, 52838228 - 52838294
Alignment:
Q  793 attggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    |||||||||||| ||||||| ||||| || |||| |||||||||| |||||| || |||||||||||    
T  52838228 attggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgacctctattaaaaaa 52838294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 820 - 940
Target Start/End: Complemental strand, 52838509 - 52838379
Alignment:
Q  820 tatgtttcaaaatgttgcaattttggcccc-tattaaaaaa--tagcaattttggcccctttcatccaaa---attgctgag-agatgccacgtgtccca 912  Q
    ||||||| ||||||||| | ||||||| || ||||||||||  ||||||||||||||||||||||| |||   ||||||||| ||| | |||||||| ||    
T  52838509 tatgttttaaaatgttgtagttttggctccatattaaaaaaaatagcaattttggcccctttcatcaaaaaatattgctgagaagacgacacgtgtctca 52838410  T
Q  913 aaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||||  || |||| |||||||||||||||||    
T  52838409 aaaaagggaccataatcgcaactttttgtaa 52838379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 819 - 859
Target Start/End: Complemental strand, 6319082 - 6319041
Alignment:
Q  819 ttatgtttcaaaatgttgcaattttggcc-cctattaaaaaa 859  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  6319082 ttatgtttcaaaatgttgcaattttggccacctattaaaaaa 6319041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 823 - 940
Target Start/End: Original strand, 2715746 - 2715869
Alignment:
Q  823 gtttcaaaatgttgcaattttgg-cccctattaaaaaa-tagcaattttggcccctttcatccaaaattgctgaga-gatgccacgtgtcccaaaaa--g 917  Q
    ||||||||||||||| ||||||| |||||||||||||| ||  ||||| | | | |||  |||||||| | ||||| || |||||||||||||||||  |    
T  2715746 gtttcaaaatgttgcgattttggtcccctattaaaaaaataaaaatttagccgcttttgttccaaaatggatgagaagacgccacgtgtcccaaaaaatg 2715845  T
Q  918 ggccat-atcgcaactttttgtaa 940  Q
    |||||| |||||||||||||||||    
T  2715846 ggccataatcgcaactttttgtaa 2715869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 5304649 - 5304585
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggccc-ctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| |||||| ||| |||||||||||    
T  5304649 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccctctattaaaaaa 5304585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 916
Target Start/End: Original strand, 36729089 - 36729213
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaa-tagcaattttggcccctttcat-ccaaaattgct 892  Q
    |||||| ||||| |||||| ||  || ||||||||||||||  |||||| |||| |||||||||| |   |||||||||||||||||| |||||||| ||    
T  36729089 ggctaacctgcaattttggacccctaagtttcaaaatgttgtgattttgaccccctattaaaaaaattataattttggcccctttcatcccaaaattact 36729188  T
Q  893 gag-agatgccacgtgtcccaaaaa 916  Q
    ||| ||| ||||| |||||||||||    
T  36729189 gagaagacgccacatgtcccaaaaa 36729213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 45633438 - 45633501
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||  || |||||||||| |||| |||||| ||||||||||||||    
T  45633438 ggctaaactacacttttcgccccctaagtttcaaaatattgcgattttgacccctattaaaaaa 45633501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 681
Target Start/End: Original strand, 49700415 - 49700462
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaatttt 681  Q
    |||| ||||| |||||||||||| ||||||| ||||||||||||||||    
T  49700415 ggcttaaacgtactttttaccccttaagtttacaaaagttgcaatttt 49700462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 638 - 692
Target Start/End: Complemental strand, 14835637 - 14835583
Alignment:
Q  638 aaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||||||||| || ||||||||| |||  ||||||||| ||||||||||||||||    
T  14835637 aaaacgcactcttgaccccctaactttataaaagttgcgattttggccccctatt 14835583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 794 - 859
Target Start/End: Original strand, 25011733 - 25011799
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||||| ||||||| | ||  || ||||||||||||||| ||||||| ||||||||||||||    
T  25011733 ttggctaaactccacttttcgtcccctaagtttcaaaatgttgcgattttggccccctattaaaaaa 25011799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 845
Target Start/End: Original strand, 2931321 - 2931370
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg 845  Q
    ||||||||| ||||||| ||||| || |||| ||||||||||||||||||    
T  2931321 ggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttgg 2931370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 878
Target Start/End: Complemental strand, 9397495 - 9397410
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaatagcaattttggccccttt 878  Q
    |||||||||||||||||||  |||  || |||| |||||||||  ||||||| ||||||||||||||  | || ||||||||||||    
T  9397495 ttggctaaactgcacttttcaccccctaagttttaaaatgttgggattttggccccctattaaaaaaatgaaaatttggccccttt 9397410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 692
Target Start/End: Complemental strand, 9397496 - 9397435
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    ||||||||||  |||||||| |||||||||||||  ||| ||||  ||||||||||||||||    
T  9397496 tttggctaaactgcacttttcaccccctaagttttaaaatgttgggattttggccccctatt 9397435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 849
Target Start/End: Complemental strand, 18259415 - 18259362
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc 849  Q
    ||||||||| ||||||| ||||| ||  |||||||||||||| |||||||||||    
T  18259415 ggctaaacttcacttttcgccctctaaatttcaaaatgttgcgattttggcccc 18259362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 849
Target Start/End: Complemental strand, 25618900 - 25618847
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc 849  Q
    ||||||||| ||||||  ||||| || |||||||||||||||||||||| ||||    
T  25618900 ggctaaacttcactttgcgccctctaagtttcaaaatgttgcaattttgacccc 25618847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 672
Target Start/End: Complemental strand, 31183936 - 31183895
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagt 672  Q
    ||||||| |||| ||||||||||||| |||||||||||||||    
T  31183936 tttggcttaaactcactttttaccccttaagtttgcaaaagt 31183895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 41034635 - 41034700
Alignment:
Q  796 ggctaaactgcacttttggccctttat-gtttcaaaatgttgcaattttggcccc-tattaaaaaa 859  Q
    ||||||||| ||||||| || |||||  |||||||||||||||||||||| |||| ||||||||||    
T  41034635 ggctaaacttcacttttcgcactttaaagtttcaaaatgttgcaattttgaccccttattaaaaaa 41034700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 823 - 856
Target Start/End: Original strand, 52490493 - 52490526
Alignment:
Q  823 gtttcaaaatgttgcaattttggcccctattaaa 856  Q
    |||||||||||||||||||||| |||||||||||    
T  52490493 gtttcaaaatgttgcaattttgacccctattaaa 52490526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 2e-55; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 634 - 792
Target Start/End: Complemental strand, 40630683 - 40630525
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||||||    
T  40630683 ggctaaagtgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatagcaaaagtgatcccctatgtctacccccttt 40630584  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  40630583 tgcaaaacgtcaattttgactcagtcaaccctatgtggcacgccacctgtgtatttatt 40630525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 634 - 792
Target Start/End: Original strand, 40630018 - 40630176
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| || ||||        |||||||||||||||||||||| ||||||||||    
T  40630018 ggctaaaacgcactttttacccattaagtttgcaaaagttgcaattttggcaccttattaaaaaaaatggcaaaagtgatcccctatgtctacccccttt 40630117  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  40630118 tgcaaaatgtcaattttgactcagtcaaccctatgtggcacgccacctgtgtatttatt 40630176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 636 - 792
Target Start/End: Complemental strand, 17341553 - 17341397
Alignment:
Q  636 ctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttg 735  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||        ||  |||||||| |||| |||| ||||||||||||    
T  17341553 ctaaaacgcactttttgccccctaagtttgcagaagttgcaattttgaccccctattaaaaaaaatgataaaagtgaccccccatgtctacccccttttg 17341454  T
Q  736 caaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||    
T  17341453 caaaacgtcaattttgactcagtcaaccatatgtggcacgtcacctgtgtatttatt 17341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 634 - 782
Target Start/End: Original strand, 38261305 - 38261453
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||||| ||||||        |||||||||||| |||| |||| ||||||||||    
T  38261305 ggctaaaacgcactttttgtcccctaagtttgcagaagttgcaattttggccacctattaaaaaaaatggcaaaagtgaccccccatgtctacccccttt 38261404  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctg 782  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||    
T  38261405 tgcaaaacgtcaattttgactcagtcaaccatatgtggcacgccacctg 38261453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 634 - 781
Target Start/End: Original strand, 6247384 - 6247531
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||        |||||||||||| ||| |||||||| ||||||     
T  6247384 ggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccccttatgtttagccccttc 6247483  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacct 781  Q
    |||||||| ||||||||||||||||||| || ||||| || |||||||    
T  6247484 tgcaaaacctcaattttgacccagtcaatcctatgtgtcatgccacct 6247531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 3328813 - 3328965
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||||||||||||| ||||  |||||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  3328813 ggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggccccctattaaaaaaaatagcaattttggcccctttcatccaaaaattgc 3328912  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  3328913 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 3328965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 32960645 - 32960794
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgctg 893  Q
    |||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||    
T  32960645 ggctaaactgcatttttcgccccctatgtttcaaaatgttgcaattttggcccctattaaaaaaatggcaattttggcccctttcatcccaaaattactg 32960744  T
Q  894 ag-agatgccacgtgtccc-aaaaagggccat-atcgcaactttttgtaa 940  Q
    || ||| |||||||||||| ||||| |||||| |||||||||||||||||    
T  32960745 agaagacgccacgtgtcccaaaaaaaggccataatcgcaactttttgtaa 32960794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 634 - 789
Target Start/End: Complemental strand, 38262399 - 38262245
Alignment:
Q  634 ggctaaaacgcacttttta-ccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccctt 732  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||         ||||||||||| |||  ||||||||||||||    
T  38262399 ggctaaaacgcacttttttgccccctaagtttgcagaagttgcaattttggccccctattaaaaaaaaaggcaaaagtgacccc--atgtttaccccctt 38262302  T
Q  733 ttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    |||||||||||||||||| || |||||||||  |||||||| |||||||||||||||    
T  38262301 ttgcaaaacgtcaattttaactcagtcaaccatatgtggcatgccacctgtgtattt 38262245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 634 - 781
Target Start/End: Original strand, 50296206 - 50296353
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||        |||||||||| | ||| |||||||| |||||||    
T  50296206 ggctaaaatgcactttttgccccttaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtaaccccttatgtttagccccttt 50296305  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacct 781  Q
    |||||||| ||||||||||||||||||| || ||||| || |||||||    
T  50296306 tgcaaaacctcaattttgacccagtcaatcctatgtgtcatgccacct 50296353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 26628025 - 26628177
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||||| ||||||| ||||  |||||||||||||||||||||||||| ||||||||  ||||||| |||||||||||||||||||| ||||||||||    
T  26628025 ggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaattttggcccctttcatcccaaaattgc 26628124  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  26628125 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 26628177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 28154882 - 28155034
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||||| ||||||| ||||  |||||||||||||||||||||||||| ||||||||  ||||||| |||||||||||||||||||||| ||||||||    
T  28154882 ggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaattttggcccctttcatccaaaaattgc 28154981  T
Q  892 tgag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
    |||| ||| ||||||||||||  |||||||||||| |||||||||||||||||    
T  28154982 tgagaagacgccacgtgtcccaaaaaaagggccataatcgcaactttttgtaa 28155034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 634 - 786
Target Start/End: Original strand, 37087113 - 37087265
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||        |||||||||  | |||| |||||| ||||||||    
T  37087113 ggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggcaccctattagaaaaaatggcaaaagctaccccccatgttttcccccttt 37087212  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgta 786  Q
    ||||||||||| ||||||||| ||||||||  |||||||| ||||| ||||||    
T  37087213 tgcaaaacgtcgattttgaccgagtcaaccatatgtggcatgccacatgtgta 37087265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 632 - 752
Target Start/End: Complemental strand, 50297371 - 50297251
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccct 731  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||        |||||||||||| ||| |||||||| |||||    
T  50297371 ttggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttggccccttattaaaaaaaatggcaaaagtgaccccttatgtttagcccct 50297272  T
Q  732 tttgcaaaacgtcaattttga 752  Q
    | |||||||| ||||||||||    
T  50297271 tatgcaaaacctcaattttga 50297251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 22447740 - 22447892
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||  |||||||||||||||||| ||||||||||| |||||| |    
T  22447740 ggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatagcaattttggaccctttcatccaaaaatttc 22447839  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| ||||||| ||| |||||  ||||||| |||||||||||||||||    
T  22447840 tgagaagacgccacgtatccaaaaaaaggggccataatcgcaactttttgtaa 22447892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 799 - 940
Target Start/End: Complemental strand, 6927770 - 6927622
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgctgag 895  Q
    ||||| |||||||| ||||  ||||||||| |||||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||||||||||| ||    
T  6927770 taaacagcacttttcgccccctatgtttcataatgttgcaattttggccccctattaaaaaaatagcaattttagcccctttcatcccaaaattgctcag 6927671  T
Q  896 -agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
     |||||||||||||||||||||  ||| ||| |||||||||||||||||    
T  6927670 aagatgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaa 6927622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 789 - 940
Target Start/End: Original strand, 27852746 - 27852903
Alignment:
Q  789 tattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaatttt-ggcccctatt-aaaaaatagcaattttggcccctttca-tccaa 885  Q
    |||| ||||||||| ||||||||| ||||  |||||||||||||||||||||||| | |||||||| ||||||| |||||||||||||| ||||  ||||    
T  27852746 tattcttggctaaagtgcacttttcgccccctatgtttcaaaatgttgcaattttagccccctattaaaaaaatggcaattttggcccccttcagcccaa 27852845  T
Q  886 aattgctgag-agatgccacgtgtcccaaaaa-gggccat-atcgcaactttttgtaa 940  Q
    ||||| |||| ||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  27852846 aattgttgagaagacgccacgtgtcccaaaaaggggccataatcgcaactttttgtaa 27852903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 634 - 754
Target Start/End: Complemental strand, 6248511 - 6248390
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt-nnnnnnnntggcaaaagtgatcccctatgtttaccccctt 732  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||         |||||||||||| ||| |||| ||| ||||||    
T  6248511 ggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaaatggcaaaagtgaccccttatggttagcccctt 6248412  T
Q  733 ttgcaaaacgtcaattttgacc 754  Q
     |||||||| ||||||||||||    
T  6248411 ctgcaaaacctcaattttgacc 6248390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 793 - 940
Target Start/End: Original strand, 8338937 - 8339092
Alignment:
Q  793 attggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctatt--aaaaaatagcaattttggcccctttcat-ccaaaat 888  Q
    |||||||||| ||||||||| ||||  |||||||||||||||||| ||||||  ||||||||  ||||||| |||||||||||||| ||||| |||||||    
T  8338937 attggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccccttcatcccaaaat 8339036  T
Q  889 tgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||||||| ||| |||||||||||||||||   |||||| |||||||||||||||||    
T  8339037 tgctgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgtaa 8339092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 797 - 940
Target Start/End: Original strand, 23428620 - 23428771
Alignment:
Q  797 gctaaactgcacttttggccctttatgtttcaaaatgttgcaatttt-ggcccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    |||||||||||||||| ||||  ||||||||| |||||||||||||| | ||||||||  |||||||||| ||||||||||||||||| |||||||||||    
T  23428620 gctaaactgcacttttcgccccctatgtttcataatgttgcaattttagtcccctattaaaaaaaatagctattttggcccctttcatcccaaaattgct 23428719  T
Q  893 gag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
     || ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  23428720 cagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaa 23428771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 788 - 940
Target Start/End: Original strand, 28173720 - 28173881
Alignment:
Q  788 ttattatt-ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa--tagcaattttggcccctttcat-c 882  Q
    |||||||| ||||||| ||||||||| ||||  ||||||||| |||||||| ||||||| ||||||||||||||  |||||||||||||||||||||| |    
T  28173720 ttattattaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctattaaaaaaagtagcaattttggcccctttcatcc 28173819  T
Q  883 caaaattgct-gagagatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
    |||||||||| |  ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  28173820 caaaattgctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaa 28173881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 790 - 940
Target Start/End: Original strand, 22500590 - 22500747
Alignment:
Q  790 attattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcatcc-aaa 886  Q
    ||||| ||||||||||||||||| | ||  ||||||||||||| |||||||||||| |||||||| |||||||| ||||||| ||||||||||||| |||    
T  22500590 attataggctaaactgcacttttcggcccctatgtttcaaaatattgcaattttggccccctattaaaaaaatatcaattttagcccctttcatccaaaa 22500689  T
Q  887 attgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||||| ||| ||||||||||| |||||  || |||| |||||||||||||||||    
T  22500690 atttctgagaagacgccacgtgtccaaaaaaagggaccataatcgcaactttttgtaa 22500747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 704 - 789
Target Start/End: Complemental strand, 9435550 - 9435465
Alignment:
Q  704 caaaagtgatcccctatgtttacccccttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    ||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||  |||||||| ||||||| |||||||    
T  9435550 caaaagtgaccccctatgtttacccccttttgcaaaagctcaattttgacccagtcaaccatatgtggcatgccacctatgtattt 9435465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 644 - 782
Target Start/End: Complemental strand, 37088206 - 37088070
Alignment:
Q  644 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgt 743  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||        |||||||||| | |||| |||||| ||||||||||||||||||    
T  37088206 cactttttaccccctaagtttgcaaaagttgcaaattttaccccctattaaaaaaa-tggcaaaagttaccccc-atgttttcccccttttgcaaaacgt 37088109  T
Q  744 caattttgacccagtcaaccccatgtggcacgccacctg 782  Q
    | ||||||||| ||||||||  |||||||| ||||||||    
T  37088108 cgattttgaccgagtcaaccatatgtggcatgccacctg 37088070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 796 - 936
Target Start/End: Original strand, 48907293 - 48907440
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc--tattaaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| |||||||||| |||  |||||||||||||||||  |||||| ||||   || ||||||| |||||||||||||||||||| |||||||||||    
T  48907293 ggctaaagtgcacttttgaccccctatgtttcaaaatgttgtgattttgaccccctaataaaaaaatggcaattttggcccctttcatcccaaaattgct 48907392  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaacttttt 936  Q
    ||| ||| |||||||||||||||||  ||||||| |||||||||||||    
T  48907393 gagaagacgccacgtgtcccaaaaaaggggccataatcgcaacttttt 48907440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 25022664 - 25022815
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaa-aatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| ||||||||| ||||  ||||||||| ||| |||| ||||||||||| | |||||| |||||||||||||||||||||||| |||||||||||    
T  25022664 ggctaaagtgcactttttgccccatatgtttcataatattgcgattttggccccctgttaaaaaaatagcaattttggcccctttcatcccaaaattgct 25022763  T
Q  893 gag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
     || ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  25022764 cagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaa 25022815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 796 - 916
Target Start/End: Original strand, 34878529 - 34878654
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcatc-caaaattgc 891  Q
    ||||||||||||||| | ||||  |||||||||||||||||| ||||||| ||||||||  ||||||| ||||||||| ||| ||||||| |||||||||    
T  34878529 ggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttgacccatttcatctcaaaattgc 34878628  T
Q  892 tgag-agatgccacgtgtcccaaaaa 916  Q
    |||| ||| |||||||||||||||||    
T  34878629 tgagaagacgccacgtgtcccaaaaa 34878654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 4522256 - 4522106
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaata--gcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||| ||||||||| ||||| ||||||| |||||  ||  ||||||||||| |||||||||| |  |||||||||||||||||||||| ||||||||    
T  4522256 ggctaaagtgcacttttcgccctctatgttttaaaatagtg--attttggccccctattaaaaaaaatggcaattttggcccctttcatcctaaaattgc 4522159  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  |||| || |||||||||||||||||    
T  4522158 tgagaagacgccacgtgtcccaaaaaaggggcaataatcgcaactttttgtaa 4522106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 632 - 773
Target Start/End: Original strand, 17340466 - 17340611
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt---nnnnnnnntggcaaaagtgatcccctatgttta-cc 727  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||            ||||||||||| |||| |||| ||  |    
T  17340466 ttggctaaaacgcactttttgccccctaagtttgcagaagttgcaattttggtctcctattaaaaaaaaaaaaggcaaaagtgaccccccatgtctattc 17340565  T
Q  728 cccttttgcaaaacgtcaattttgacccagtcaaccccatgtggca 773  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||    
T  17340566 cccttttgcaaaacgtcaattttgactcagtcaaccatatgtggca 17340611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 634 - 753
Target Start/End: Complemental strand, 45583314 - 45583196
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||| || |||||||||||||||||||||||||||||||||||||||        ||| |||||||| | ||||||| || |||||||    
T  45583314 ggcttaaacacactttctaacccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggtaaaagtgacctcctatgtcta-ccccttt 45583216  T
Q  734 tgcaaaacgtcaattttgac 753  Q
    || |||||||||||||||||    
T  45583215 tgtaaaacgtcaattttgac 45583196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 820 - 940
Target Start/End: Complemental strand, 13081174 - 13081046
Alignment:
Q  820 tatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaa 914  Q
    |||||||||||||||||| ||||||| ||||||||  ||||||| |||||||||||||| ||||| |||||||||||||| |||  |||| |||||||||    
T  13081174 tatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgctgagaagactccacatgtcccaaa 13081075  T
Q  915 aa--gggccat-atcgcaactttttgtaa 940  Q
    ||  ||||||| |||||||||||||||||    
T  13081074 aaaggggccataatcgcaactttttgtaa 13081046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 25179879 - 25179730
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| ||||||||| ||||  |||||||||||||||||| || |||||||| |||| ||||||| |||||| ||||||| ||||| |||||||||||    
T  25179879 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgatattggccccttattaaaaaaatggcaattatggcccccttcatcccaaaattgct 25179780  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| ||  |||||||||||||  ||||||| |||||||||||||||||    
T  25179779 gagaagacgc--cgtgtcccaaaaaaggggccataatcgcaactttttgtaa 25179730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 797 - 940
Target Start/End: Original strand, 30155146 - 30155297
Alignment:
Q  797 gctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tatt--aaaaaatagcaattttggcccctttcatc-caaaattgct 892  Q
    ||||||||| |||||| | ||  ||| ||||||||||||||| |||||||||| ||||  |||||||| ||||||||||||||||||||  |||||||||    
T  30155146 gctaaactgtacttttcgtcccctatatttcaaaatgttgcagttttggccccttattaaaaaaaataacaattttggcccctttcatcaaaaaattgct 30155245  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    | | ||| |||| ||||||||||||  ||||||| |||||||||||||||||    
T  30155246 gcgaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaa 30155297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 631 - 753
Target Start/End: Original strand, 2213919 - 2214041
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccc 730  Q
    ||||||| |||| ||||||| ||||||||||||| ||||||||||||||||| |||||||||        |||||||||  | |||  ||||||| ||||    
T  2213919 tttggcttaaacccacttttgaccccctaagttttcaaaagttgcaattttgaccccctattaaaaaaaatggcaaaagccacccctcatgtttagcccc 2214018  T
Q  731 ttttgcaaaacgtcaattttgac 753  Q
    |||||||||||  ||||||||||    
T  2214019 ttttgcaaaaccccaattttgac 2214041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 796 - 937
Target Start/End: Complemental strand, 20002011 - 20001864
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    |||||||||||||||||  ||| | | ||||||||||||||| ||||||| |||||||| ||||||||||||||||| ||| |||||| ||||||||| |    
T  20002011 ggctaaactgcacttttctcccctaa-gtttcaaaatgttgcgattttggccccctattaaaaaaatagcaattttgccccttttcatcccaaaattgtt 20001913  T
Q  893 gag-agatgccacgtgtcccaaa--aagggccata-tcgcaactttttg 937  Q
    ||| ||| ||||||||| |||||  | |||||||| |||||||||||||    
T  20001912 gagaagacgccacgtgttccaaaacaggggccatagtcgcaactttttg 20001864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 796 - 916
Target Start/End: Original strand, 33279586 - 33279710
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaatttt-ggcccctatt-aaaaaatagcaattttggcccctttcatcc-aaaattgct 892  Q
    ||||||||||||||||| |||||||| ||||  ||||||||| ||||| | |||||||| ||||||| ||||||||| |||||||  ||| |||||||||    
T  33279586 ggctaaactgcacttttcgccctttaagttttgaaatgttgcgattttagacccctattaaaaaaatggcaattttgacccctttggtccaaaaattgct 33279685  T
Q  893 gag-agatgccacgtgtcccaaaaa 916  Q
    ||| ||| |||||||||| ||||||    
T  33279686 gagaagacgccacgtgtctcaaaaa 33279710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 820 - 910
Target Start/End: Original strand, 46673069 - 46673166
Alignment:
Q  820 tatgtttcaaaatgttgcaattttgg-cccctatt----aaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcc 910  Q
    ||||||||| |||||||||||||||| ||||||||    |||||| ||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  46673069 tatgtttcataatgttgcaattttggccccctattaaaaaaaaaaaagcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcc 46673166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 634 - 753
Target Start/End: Original strand, 52985130 - 52985249
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||||| ||||||||| ||||||| ||||||||| ||||||||        ||| |||| |||||||| ||| ||| |||||||    
T  52985130 ggcttaaacacactttttaccctctaagtttgtaaaagttacaattttggtcccctattaaaaaaaatggtaaaaatgatcccccatgattatccccttt 52985229  T
Q  734 tgcaaaacgtcaattttgac 753  Q
    |||||||| |||| ||||||    
T  52985230 tgcaaaacctcaactttgac 52985249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 786 - 859
Target Start/End: Complemental strand, 3329127 - 3329053
Alignment:
Q  786 atttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||| ||||||||||| ||||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  3329127 atttatttttggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 3329053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 820 - 940
Target Start/End: Complemental strand, 10743687 - 10743559
Alignment:
Q  820 tatgtttcaaaatgttgcaattttggcccc-tattaaaaaa--tagcaattttggcccctttcat-ccaaaattgct-gagagatgccacgtgtccc--a 912  Q
    ||||||||| |||||||| |||||| |||| ||||||||||  |||||||||||||||||||||| |||||||||||  | |||||||||||| |||  |    
T  10743687 tatgtttcataatgttgcgattttgaccccctattaaaaaaattagcaattttggcccctttcatcccaaaattgctcaaaagatgccacgtgacccaga 10743588  T
Q  913 aaaagggccat-atcgcaactttttgtaa 940  Q
    ||| ||| ||| |||||||||||||||||    
T  10743587 aaaggggtcataatcgcaactttttgtaa 10743559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 797 - 936
Target Start/End: Original strand, 40836181 - 40836326
Alignment:
Q  797 gctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggccc-ctattaaaaaatagcaattttggcccctttc-atccaaaattgctga 894  Q
    |||||||| ||||||| | ||  || |||| |||||||||| ||||||| || |||||||||||  || |||||||||||||||  ||||||||||||||    
T  40836181 gctaaactacacttttcgtcccctaagttttaaaatgttgcgattttggtcctctattaaaaaaatgcgattttggcccctttcgttccaaaattgctga 40836280  T
Q  895 g-agatgccacgtgtcccaaaaa--gggccat-atcgcaacttttt 936  Q
    | ||  |||||||||||||||||  ||||||| |||||||||||||    
T  40836281 gaagccgccacgtgtcccaaaaaaggggccataatcgcaacttttt 40836326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 634 - 692
Target Start/End: Original strand, 45580108 - 45580166
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  45580108 ggcttaaacacactttttactccctaagtttgcaaaagttgcaattttggcctcctatt 45580166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 795 - 859
Target Start/End: Complemental strand, 8339245 - 8339180
Alignment:
Q  795 tggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||||||| ||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||    
T  8339245 tggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaa 8339180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 634 - 687
Target Start/End: Complemental strand, 37023866 - 37023813
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggcccc 687  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  37023866 ggcttaaacacactttttacctcctaagtttgcaaaagttgcaattttggcccc 37023813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 792 - 859
Target Start/End: Original strand, 25336354 - 25336422
Alignment:
Q  792 tattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctattaaaaaa 859  Q
    ||||||||||||||||||||| |||| |||  |||||||||||||||||||||||| | ||||||||||    
T  25336354 tattggctaaactgcacttttcgccccttaaatttcaaaatgttgcaattttggcctcttattaaaaaa 25336422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 26633361 - 26633511
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaata-gcaattttggcccctttcatcc-aaaattgct 892  Q
    ||||||||||||||||| ||||  || |||| |||||||||| ||||||  |||||||||||||| | || | ||||||||||||| ||| ||||||||     
T  26633361 ggctaaactgcacttttcgccc-ctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatgcgactttggcccctttcgtccaaaaattgcc 26633459  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| || ||||||||| ||||||||  ||||||| |||||||||||||||||    
T  26633460 gagaaggtgccacgtgccccaaaaaaggggccataatcgcaactttttgtaa 26633511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 27853055 - 27852991
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||    
T  27853055 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaa 27852991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 799 - 861
Target Start/End: Complemental strand, 22448045 - 22447982
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaata 861  Q
    |||||||||||||| ||||| || |||| |||||||||||||||||| ||||||||||||||||    
T  22448045 taaactgcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaata 22447982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 820 - 940
Target Start/End: Complemental strand, 8542890 - 8542762
Alignment:
Q  820 tatgtttcaaaatgttgcaattttgg-cccctatta--aaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaa 914  Q
    ||||||| |||||||||  ||||||| |||||||||  |||||| ||||||||||| || ||||| |||||||||||||| ||| |||||||||| ||||    
T  8542890 tatgttttaaaatgttgtgattttggccccctattaataaaaatggcaattttggctcccttcatcccaaaattgctgagaagacgccacgtgtcacaaa 8542791  T
Q  915 aa--gggccat-atcgcaactttttgtaa 940  Q
    ||  ||||||| || ||||||||||||||    
T  8542790 aaaggggccataattgcaactttttgtaa 8542762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 823 - 915
Target Start/End: Complemental strand, 36311428 - 36311331
Alignment:
Q  823 gtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaaa 915  Q
    ||||||||||||||  ||||||| ||||||||  ||||||| |||||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||    
T  36311428 gtttcaaaatgttgtgattttggtcccctatttaaaaaaatggcaattttggcccctttcgtcccaaaattgttgagaagaagccacgtgtcccaaaa 36311331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 799 - 916
Target Start/End: Original strand, 46387586 - 46387706
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttggccccta--ttaaaaaatagcaattttggcccctttcatc-caaaattgctgag 895  Q
    ||||||||| |||||||| | || |||||||||| |||| ||||||||||||   ||||||||| ||||||||||||| ||||||| |||||||| ||||    
T  46387586 taaactgcatttttggcc-tctaagtttcaaaatcttgcgattttggccccttatttaaaaaattgcaattttggcccatttcatctcaaaattgatgag 46387684  T
Q  896 -agatgccacgtgtcccaaaaa 916  Q
     ||| |||| |||| |||||||    
T  46387685 aagacgccatgtgttccaaaaa 46387706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 796 - 915
Target Start/End: Complemental strand, 1743553 - 1743429
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctat--taaaaaatagcaattttggcccctttcatc-caaaattgc 891  Q
    ||||||||||||||||| || |  || |||| |||||||||| ||||||| |||||||  ||||||||||||||||| | ||||||  || |||||||||    
T  1743553 ggctaaactgcacttttcgctccctaagttttaaaatgttgcgattttggtcccctattataaaaaatagcaattttagtcccttttgtcacaaaattgc 1743454  T
Q  892 tgag-agatgccacgtgtcccaaaa 915  Q
    |||| ||| ||||| ||||||||||    
T  1743453 tgagaagacgccacatgtcccaaaa 1743429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 639 - 692
Target Start/End: Original strand, 9434450 - 9434503
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| ||||||| |||| |||||||||||||||| |||||||||||||||||||    
T  9434450 aaacccacttttcaccctctaagtttgcaaaagtagcaattttggccccctatt 9434503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 13080894 - 13080958
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| |||||||| |||||||||||||    
T  13080894 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggctccctattaaaaaa 13080958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 48907595 - 48907531
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  48907595 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 48907531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 36311152 - 36311215
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    ||||||||||||||||| | ||  || |||| |||||||||| |||||||||||||||||||||    
T  36311152 ggctaaactgcacttttcgtcccctaagttttaaaatgttgcgattttggcccctattaaaaaa 36311215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 787 - 919
Target Start/End: Complemental strand, 23320672 - 23320536
Alignment:
Q  787 tttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaatag--caattttggcccctttcat-c 882  Q
    ||||||||||||||| || ||||||| | ||  || |||| |||||||||| ||||||  |||||||||||||| |   ||||||||||||||||| | |    
T  23320672 tttattattggctaacct-cacttttcgaccactaagttttaaaatgttgcgattttgatcccctattaaaaaaaattacaattttggcccctttcgtcc 23320574  T
Q  883 caaaattgctg-agagatgccacgtgtcccaaaaaggg 919  Q
    ||||||||||| | ||| ||||| ||||||||||||||    
T  23320573 caaaattgctgaaaagacgccacatgtcccaaaaaggg 23320536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 634 - 692
Target Start/End: Complemental strand, 52986307 - 52986249
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| |||| |||||||||| ||||||||||| ||||||| |||||||| |||||||||    
T  52986307 ggcttaaacacactttttactccctaagtttgtaaaagttacaattttgaccccctatt 52986249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 798 - 937
Target Start/End: Complemental strand, 32315219 - 32315075
Alignment:
Q  798 ctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaa-aaaatagcaattttggcccctttcat-ccaaaattgctgag 895  Q
    ||||||||||||||| | || ||| |||| |||||||||| ||||| | ||||||||| |||||  |||||||||  |||||| | ||||||||| ||||    
T  32315219 ctaaactgcacttttcgtcccttaagttttaaaatgttgcgattttcgtccctattaaaaaaatgacaattttgggtcctttcgtcccaaaattgttgag 32315120  T
Q  896 -agatgccacgtgtcccaaa--aagggccatatcgcaactttttg 937  Q
     ||| ||||| ||||| |||  | ||||||||||||| |||||||    
T  32315119 aagacgccacatgtcctaaaacatgggccatatcgcagctttttg 32315075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 786 - 940
Target Start/End: Complemental strand, 3781192 - 3781030
Alignment:
Q  786 atttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctatt--aaaaaatagcaattttggcccctttcatc 882  Q
    |||||| |||||||||||||||||||| |||  |||  ||| |||||||| | ||||||||| ||||||  |||||| |  |||||  |||  |||||||    
T  3781192 atttataattggctaaactgcacttttcgcctcttaaattttaaaatgttacgattttggcctcctattaaaaaaaaaaaaaatttcagcctttttcatc 3781093  T
Q  883 c-aaaattgctgag-agatgccacgtgtcccaaaaa--gggccata-tcgcaactttttgtaa 940  Q
    | |||||||||||| |||  ||||||||||||||||  ||| |||| ||||||||||||||||    
T  3781092 ctaaaattgctgagaagacaccacgtgtcccaaaaaaggggtcatattcgcaactttttgtaa 3781030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 8542610 - 8542674
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaa 859  Q
    ||||||||| ||||||| | ||| || ||||||||||||||||||||||  ||||||||||||||    
T  8542610 ggctaaacttcacttttcgtcctctaagtttcaaaatgttgcaattttgaccccctattaaaaaa 8542674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 799 - 859
Target Start/End: Original strand, 20001714 - 20001774
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    ||||||||||||||  |||  || ||||||||||||||| |||||| ||||||||||||||    
T  20001714 taaactgcacttttaaccccctaagtttcaaaatgttgcgattttgacccctattaaaaaa 20001774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 25179578 - 25179642
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || |||| |||||||||| ||||||| ||||||||||||||    
T  25179578 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggccccctattaaaaaa 25179642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 26628329 - 26628265
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| || |||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  26628329 ggctaaacttcatttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 26628265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 823 - 915
Target Start/End: Complemental strand, 33105217 - 33105121
Alignment:
Q  823 gtttcaaaatgttgcaattttggc-ccctattaaaaaa-tagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaaa 915  Q
    |||| ||||||||||||||||    ||||||||||||| ||||||||||||||  |||||| ||||||||| |||| ||| ||||||||||||||||    
T  33105217 gttttaaaatgttgcaattttcattccctattaaaaaaatagcaattttggcctatttcatcccaaaattgatgagaagacgccacgtgtcccaaaa 33105121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 798 - 849
Target Start/End: Original strand, 4775852 - 4775903
Alignment:
Q  798 ctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc 849  Q
    ||||||| |||||||  |||| || |||||||||||||||||||||||||||    
T  4775852 ctaaactacacttttcaccctctaagtttcaaaatgttgcaattttggcccc 4775903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 687
Target Start/End: Complemental strand, 26127209 - 26127154
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggcccc 687  Q
    |||||| ||||||||| || |||| |||||||||||||||| || |||||||||||    
T  26127209 ttggcttaaacgcactattcaccctctaagtttgcaaaagtagcgattttggcccc 26127154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 794 - 859
Target Start/End: Complemental strand, 22500900 - 22500834
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaa 859  Q
    ||||||||||| |||||||  |||||||  ||| |||||||||||||||||  ||||||||||||||    
T  22500900 ttggctaaacttcacttttcaccctttaaattttaaaatgttgcaattttgaccccctattaaaaaa 22500834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 799 - 859
Target Start/End: Original strand, 4521957 - 4522018
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||| ||||||| ||||| || |||| |||||||||| ||||||| ||||||||||||||    
T  4521957 taaacttcacttttcgccctataagttttaaaatgttgcgattttggccccctattaaaaaa 4522018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 634 - 691
Target Start/End: Original strand, 19984849 - 19984906
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctat 691  Q
    |||||||  ||||||||  ||||||||||||  |||| ||||||||||||||||||||    
T  19984849 ggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctat 19984906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 859
Target Start/End: Original strand, 50296201 - 50296270
Alignment:
Q  791 ttattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||| ||||||| ||||||||| |||| ||| ||||  ||| ||||||||||||| ||||||||||||||    
T  50296201 ttataggctaaaatgcactttttgccccttaagtttgcaaaagttgcaattttggccccctattaaaaaa 50296270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 6e-46; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 634 - 792
Target Start/End: Original strand, 20891806 - 20891964
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||        |||||||||||| |||| |||| ||||||||||    
T  20891806 ggctaaaacacactttttgccccctaagtttgcagaagttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccccatgtctacccccttt 20891905  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||| ||||||||||    
T  20891906 tgcaaaacgtcaattttgactcagtcaaccatatgtggcacgccacctatgtatttatt 20891964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 632 - 789
Target Start/End: Original strand, 26444484 - 26444641
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccct 731  Q
    |||||| ||||  |||||| |||| |||||||||||||||| |||||||||||||||||||        |||||||||||| |||| ||||||||| |||    
T  26444484 ttggcttaaacctacttttcaccctctaagtttgcaaaagtagcaattttggccccctattaaaaaaaatggcaaaagtgaccccccatgtttacctcct 26444583  T
Q  732 tttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    |||||||||  |||||||||||||||||||||  |||||||| |||||||||| ||||    
T  26444584 tttgcaaaagctcaattttgacccagtcaaccatatgtggcatgccacctgtgcattt 26444641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 800 - 936
Target Start/End: Original strand, 14572182 - 14572326
Alignment:
Q  800 aaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcatcc-aaaattgctgag 895  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||||||    
T  14572182 aaactgcacttttcgccccctatgttttaaaatgttgcaattttggccccctattaaaaaaaatagcaattttggcccctttcatccaaaaattgctgag 14572281  T
Q  896 -agatgccacgtgtccc--aaaaagggccat-atcgcaacttttt 936  Q
     ||||||||| ||||||  |||||||||||| |||||||||||||    
T  14572282 aagatgccacatgtcccaaaaaaagggccataatcgcaacttttt 14572326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 634 - 786
Target Start/End: Original strand, 15976612 - 15976764
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| | |||||||        |||||||||  | |||| |||||| ||||||||    
T  15976612 ggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttgacaccctattaaaaaaaatggcaaaagctaccccccatgttttcccccttt 15976711  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgta 786  Q
    ||||||| ||||||||||||| ||||||||  |||||||| ||||| ||||||    
T  15976712 tgcaaaatgtcaattttgaccgagtcaaccatatgtggcatgccacatgtgta 15976764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 794 - 916
Target Start/End: Complemental strand, 31211097 - 31210973
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||||| ||||||||||||||  ||||||||||||| |||| ||||||  |||||||||||||| |||||||||||||||||||| |||||||||||    
T  31211097 ttggctaaagtgcacttttggccccctatgtttcaaaatattgcgattttgatccctattaaaaaatggcaattttggcccctttcatcccaaaattgct 31210998  T
Q  893 gag-agatgccacgtgtcccaaaaa 916  Q
    ||| |||  ||||||||||||||||    
T  31210997 gagaagacaccacgtgtcccaaaaa 31210973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 796 - 887
Target Start/End: Original strand, 18749097 - 18749190
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcatccaaaa 887  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||    
T  18749097 ggctaaactgcacttttcgccccttatgttttaaaatgttgcaattttggccccctattaaaaaaatagcaattttggcccctttcatacaaaa 18749190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 35102491 - 35102643
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaatttt-ggcccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||| ||||||||| ||||  |||||||||||||||||| ||||| | ||||||||  ||||||| |||||||||||||| ||||| ||||||||||    
T  35102491 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttagccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgc 35102590  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||||||| || ||||||||||||||    
T  35102591 tgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaa 35102643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 790 - 940
Target Start/End: Complemental strand, 25819994 - 25819836
Alignment:
Q  790 attattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcatc-caa 885  Q
    ||||||||||||||||||||||| | ||  ||||||| |||||||| ||||||||| ||||||||  ||||||| | ||||||||||||||| |||  ||    
T  25819994 attattggctaaactgcacttttcgtcccctatgttttaaaatgttacaattttggccccctattaaaaaaaattgtaattttggccccttttatcaaaa 25819895  T
Q  886 aattgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||||||||| ||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  25819894 aattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaa 25819836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 786 - 940
Target Start/End: Complemental strand, 32452040 - 32451878
Alignment:
Q  786 atttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctatt--aaaaaatagcaattttggcccctttcatc 882  Q
    ||||||| | ||||||||||||||||| | ||  |||||||||||||||||||||||||  ||||||||  |||||| | ||||||||||||||||||||    
T  32452040 atttattttaggctaaactgcactttttgtcccctatgtttcaaaatgttgcaattttgaccccctattaaaaaaaaaaacaattttggcccctttcatc 32451941  T
Q  883 c-aaaattgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    | ||||||| |||| ||| ||||| |||| ||||||  ||| ||| |||||||||||||||||    
T  32451940 caaaaattgttgagaagacgccacatgtctcaaaaaaggggtcataatcgcaactttttgtaa 32451878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 634 - 753
Target Start/End: Complemental strand, 14456249 - 14456131
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||        |||||||||||| |||  |||||||||||||||    
T  14456249 ggcttaaacgcactttttacccccaaagtttgcaaaagttacaattttgg-cccctattaaaaaaaatggcaaaagtgacccctaatgtttacccccttt 14456151  T
Q  734 tgcaaaacgtcaattttgac 753  Q
    | |||||  |||||||||||    
T  14456150 tacaaaatttcaattttgac 14456131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 786 - 940
Target Start/End: Complemental strand, 15298798 - 15298637
Alignment:
Q  786 atttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tatt--aaaaaatagcaattttggcccctttcatc 882  Q
    ||||||| | || |||| |||| |||| ||||| |||||||||||||||||| ||||||||||| ||||  ||||||| ||||||||||| || || |||    
T  15298798 atttattttaggttaaagtgcatttttcgccctctatgtttcaaaatgttgcgattttggccccttattaaaaaaaatggcaattttggctccctttatc 15298699  T
Q  883 -caaaattgctgag-agatgccacgtgtccc-aaaaagggccat-atcgcaactttttgtaa 940  Q
     ||||||||||||| ||| ||||| |||||| ||||||| |||| |||||||||||||||||    
T  15298698 tcaaaattgctgagaagacgccacttgtcccaaaaaaggaccataatcgcaactttttgtaa 15298637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 634 - 692
Target Start/End: Complemental strand, 15981076 - 15981018
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15981076 ggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 15981018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 631 - 753
Target Start/End: Complemental strand, 26444917 - 26444795
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccc 730  Q
    ||||||| |||| ||||||| |||| |||||||||||||||| ||||||||  |||||||||        ||||||||| || |||| ||||||||||||    
T  26444917 tttggcttaaacccacttttcaccctctaagtttgcaaaagtagcaattttaaccccctattaaaaaaaatggcaaaagcgaccccccatgtttaccccc 26444818  T
Q  731 ttttgcaaaacgtcaattttgac 753  Q
    ||||||||||  |||||||||||    
T  26444817 ttttgcaaaagctcaattttgac 26444795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 634 - 754
Target Start/End: Original strand, 20583017 - 20583137
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||| |||||||||||| |||||||||||||||| |||||||||        |||||||||||| |||  ||| ||| |||||||    
T  20583017 ggcttaaacacactttttatcccctaagtttggaaaagttgcaattttgaccccctattaaaaaaaatggcaaaagtgacccctcatgattatccccttt 20583116  T
Q  734 tgcaaaacgtcaattttgacc 754  Q
    || ||||| ||||||||||||    
T  20583117 tgtaaaacttcaattttgacc 20583137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 796 - 916
Target Start/End: Complemental strand, 34834228 - 34834104
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctattaaaaaa-tagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| ||||||||| |||| |||||||| ||||| |||| |||||| || |||||||||||| | |||||||||||||  ||||| |||||||||||    
T  34834228 ggctaaagtgcacttttcgccccttatgttttaaaatattgcgattttgacctcctattaaaaaaatggcaattttggcccacttcatcccaaaattgct 34834129  T
Q  893 gag-agatgccacgtgtcccaaaaa 916  Q
    ||| ||| |||||||||||||||||    
T  34834128 gagaagacgccacgtgtcccaaaaa 34834104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 18791662 - 18791509
Alignment:
Q  796 ggctaaactgcacttttgg-ccctttatgtttcaaaatgttgcaattttggcccc-tatt--aaaaaatagcaattttggcccctttcat-ccaaaattg 890  Q
    ||||||| ||||||||| | |||  ||||||| |||||||||| ||||||||||| ||||  ||||||| |||||||||||||| ||||| |||||||||    
T  18791662 ggctaaagtgcacttttcgtccccctatgttttaaaatgttgcgattttggccccctatttaaaaaaatggcaattttggcccccttcatcccaaaattg 18791563  T
Q  891 ctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
     |||| ||| ||||||||||| |||||  ||||||| |||||||||||||||||    
T  18791562 ttgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaa 18791509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 631 - 753
Target Start/End: Complemental strand, 20584035 - 20583914
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccc 730  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||        |||||||||||| |||  || |||| | ||    
T  20584035 tttggcttaaacgtactttttaccctctaagtttgcaaaagttgcaattttgaccccctattaaaaaaaatggcaaaagtgacccctcatattta-ctcc 20583937  T
Q  731 ttttgcaaaacgtcaattttgac 753  Q
    |||||||||||  ||||||||||    
T  20583936 ttttgcaaaactccaattttgac 20583914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 639 - 779
Target Start/End: Original strand, 14455033 - 14455173
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaa 738  Q
    ||||||||| |||| |||||||||||  |||||| |||||||||||||||||||        |||||||| ||| ||   |||||| |||||||||||||    
T  14455033 aaacgcactatttatcccctaagtttctaaaagtagcaattttggccccctattaaaaaaaatggcaaaaatgacccttcatgtttgcccccttttgcaa 14455132  T
Q  739 aacgtcaattttgacccagtcaaccccatgtggcacgccac 779  Q
    ||| |||||||||||  |||||| || ||||| || |||||    
T  14455133 aacctcaattttgacttagtcaagcctatgtgtcatgccac 14455173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 796 - 912
Target Start/End: Complemental strand, 3118981 - 3118862
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaatagcaattttggcccctttcat-ccaaaattgctg 893  Q
    ||||||||||||||||| ||||  ||||||||| ||||||   ||||||||||| | |||||||||  ||||||||||||||||||| ||||||||| |     
T  3118981 ggctaaactgcacttttcgccccctatgtttcataatgttatgattttggccccctgttaaaaaattacaattttggcccctttcatcccaaaattgatc 3118882  T
Q  894 ag-agatgccacgtgtccca 912  Q
    || ||||| |||||||||||    
T  3118881 agaagatgtcacgtgtccca 3118862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 637 - 691
Target Start/End: Original strand, 15888974 - 15889028
Alignment:
Q  637 taaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctat 691  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||||||||||||    
T  15888974 taaaacgcacgttttgccccctaagtttgcaaatgttgcaattttggccccctat 15889028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 824 - 940
Target Start/End: Original strand, 26710336 - 26710459
Alignment:
Q  824 tttcaaaatgttgcaattttggcccct-attaaaaaata--gcaattttggcccctttcatcc-aaaattgctgaga-gatgccacgtgtcccaaaaa-- 916  Q
    |||| ||||||||||||||||||| || ||||||||| |  ||||||| |||||||| ||||| |||||| |||||| ||||||||||||||||||||      
T  26710336 tttcgaaatgttgcaattttggcctcttattaaaaaaaatggcaatttcggcccctt-catcccaaaattactgagaagatgccacgtgtcccaaaaaag 26710434  T
Q  917 gggccat-atcgcaactttttgtaa 940  Q
    ||||||| |||||||||||||||||    
T  26710435 gggccataatcgcaactttttgtaa 26710459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 24603664 - 24603513
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaa--aaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| || |||||| ||||  ||||||| ||||| || | |||||||||||||||||  |||||  ||| ||||||||| ||||| |||||||||||    
T  24603664 ggctaaagtgtacttttcgccccatatgttttaaaatattacgattttggcccctattaaaaaaaatgacaactttggcccccttcatcccaaaattgct 24603565  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||| |||||| |||||  ||||||| |||||||||||||||||    
T  24603564 gagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaa 24603513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 799 - 940
Target Start/End: Original strand, 4597408 - 4597557
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttc-atccaaaattgctg- 893  Q
    |||| ||||||||| ||||  |||||||||||||||||| ||||||| ||||||||  |||||||  ||||||||||||| ||| | |||||||| |||     
T  4597408 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtcccctattaaaaaaaatgacaattttggcccccttcaacccaaaattactga 4597507  T
Q  894 agagatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    | ||| ||||| |||||||||||  ||||||| || ||||||||||||||    
T  4597508 aaagacgccacatgtcccaaaaaaggggccataattgcaactttttgtaa 4597557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 22968457 - 22968394
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    ||||||| | ||||||| |||| ||| ||||||||||||||| |||||||||||||||||||||    
T  22968457 ggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccctattaaaaaa 22968394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 23819936 - 23819999
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    ||||||| | ||||||| |||| ||| ||||||||||||||| |||||||||||||||||||||    
T  23819936 ggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccctattaaaaaa 23819999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 783 - 849
Target Start/End: Complemental strand, 4597722 - 4597656
Alignment:
Q  783 tgtatttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc 849  Q
    ||||| ||| || ||||||||| ||||||| ||||| || |||||||||||||||||||||||||||    
T  4597722 tgtatatataataggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggcccc 4597656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 854 - 940
Target Start/End: Original strand, 22968217 - 22968307
Alignment:
Q  854 aaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtccca-aaaagggccat-atcgcaactttttgtaa 940  Q
    |||||||| ||||||||||||||||||| ||||||||||| || ||||| |||||||| || ||||||| ||| |||||||||||||||||    
T  22968217 aaaaaataacaattttggcccctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaagggtcataatcgcaactttttgtaa 22968307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 854 - 940
Target Start/End: Complemental strand, 23820176 - 23820086
Alignment:
Q  854 aaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtccca-aaaagggccat-atcgcaactttttgtaa 940  Q
    |||||||| ||||||||||||||||||| ||||||||||| || ||||| |||||||| || ||||||| ||| |||||||||||||||||    
T  23820176 aaaaaataacaattttggcccctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaagggtcataatcgcaactttttgtaa 23820086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 795 - 859
Target Start/End: Complemental strand, 26710612 - 26710547
Alignment:
Q  795 tggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||||||| ||||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  26710612 tggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 26710547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 753
Target Start/End: Original strand, 3488034 - 3488149
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||||||||||||| ||||||||||||||||||| | |||||||| ||||| ||        ||||||||||||  ||| ||||||| ||| |||    
T  3488034 ggcttaaacgcactttttatcccctaagtttgcaaaagtagaaattttggtcccct-tttaaaaaaatggcaaaagtga--ccccatgttta-ccctttt 3488129  T
Q  734 tgcaaaacgtcaattttgac 753  Q
    |||||||| |||||||||||    
T  3488130 tgcaaaacttcaattttgac 3488149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 24051009 - 24051073
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  24051009 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 24051073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 795 - 865
Target Start/End: Original strand, 22269409 - 22269480
Alignment:
Q  795 tggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggccc-ctattaaaaaatagcaa 865  Q
    |||||||||||||||||| | ||| || |||||||||| |||| |||||||||| |||||||||||| ||||    
T  22269409 tggctaaactgcacttttcgtcctctaagtttcaaaatattgcgattttggccctctattaaaaaatggcaa 22269480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 796 - 896
Target Start/End: Complemental strand, 34528450 - 34528348
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    |||||||| |||||||| ||||  || || |||||||||||| ||||||||| |||||| |||||||  ||||||||||||||||| | |||||||||||    
T  34528450 ggctaaac-gcactttttgccccctaagtatcaaaatgttgcgattttggcctcctattaaaaaaatgacaattttggcccctttcgtcccaaaattgct 34528352  T
Q  893 gaga 896  Q
    ||||    
T  34528351 gaga 34528348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 794 - 859
Target Start/End: Complemental strand, 18749434 - 18749368
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaa 859  Q
    ||||||||||| ||||||| ||||| || ||||||||||||||| ||||||  ||||||||||||||    
T  18749434 ttggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaa 18749368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 794 - 859
Target Start/End: Original strand, 25819683 - 25819749
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||||  ||||||| ||||| || |||| |||||||||||||||||| ||||||||||||||    
T  25819683 ttggctaaacctcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaa 25819749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 633 - 682
Target Start/End: Complemental strand, 3489418 - 3489369
Alignment:
Q  633 tggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttg 682  Q
    ||||| ||||||||||||||||||||||||||| |||||| | |||||||    
T  3489418 tggcttaaacgcactttttaccccctaagtttgtaaaagtaggaattttg 3489369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 823 - 875
Target Start/End: Original strand, 4013716 - 4013771
Alignment:
Q  823 gtttcaaaatgttgcaattttggcccctattaaa---aaatagcaattttggcccc 875  Q
    |||||||||||||||||||||| |||||||||||   |||| ||||||||||||||    
T  4013716 gtttcaaaatgttgcaattttgacccctattaaaaagaaatggcaattttggcccc 4013771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 795 - 859
Target Start/End: Original strand, 24603360 - 24603425
Alignment:
Q  795 tggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaa 859  Q
    |||||||||| ||||||| | |||||| ||||||||||||||| ||||||  ||||||||||||||    
T  24603360 tggctaaacttcacttttcgtcctttaagtttcaaaatgttgcgattttgctcccctattaaaaaa 24603425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 796 - 849
Target Start/End: Complemental strand, 35102767 - 35102714
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc 849  Q
    |||| |||| ||||||| ||||| || |||||||||||||||||||||||||||    
T  35102767 ggctcaacttcacttttcgccctctaagtttcaaaatgttgcaattttggcccc 35102714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 854 - 940
Target Start/End: Original strand, 20863789 - 20863880
Alignment:
Q  854 aaaaaatagcaattttggcccctttcat-ccaaaattgctgaga-gatgccacgtgtcccaaaaa--gggccata-tcgcaactttttgtaa 940  Q
    |||||| |||||||| ||||| |||| | ||||||||||||||| || |||| ||||||||||||  |||||||| ||||||||||||||||    
T  20863789 aaaaaaaagcaatttcggcccttttcgttccaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaa 20863880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 854 - 916
Target Start/End: Complemental strand, 24051251 - 24051187
Alignment:
Q  854 aaaaaatagcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaaaa 916  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||| ||| |||||||||||||||||    
T  24051251 aaaaaatggcaattttggcccatttcatcccaaaattgatgagaagacgccacgtgtcccaaaaa 24051187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 32451726 - 32451790
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||  ||||||| ||||||||||||||    
T  32451726 ggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggccccctattaaaaaa 32451790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 34833925 - 34833989
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaatt-ttggcccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || |||||||||||||||||||  | |||||||||||||||    
T  34833925 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattcctcgcccctattaaaaaa 34833989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 797 - 859
Target Start/End: Complemental strand, 4013968 - 4013905
Alignment:
Q  797 gctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||||||||||||| | ||  || ||||||||||||||| ||||||| ||||||||||||||    
T  4013968 gctaaactgcacttttcgtcccctaagtttcaaaatgttgcgattttggccccctattaaaaaa 4013905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 685
Target Start/End: Original strand, 4370898 - 4370949
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggcc 685  Q
    |||| ||||||||| || ||||||||||||||||||||| || |||||||||    
T  4370898 ggcttaaacgcactattcaccccctaagtttgcaaaagtagcgattttggcc 4370949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 849
Target Start/End: Original strand, 11623157 - 11623212
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc 849  Q
    |||||| || ||||||||||||||| |||||||||| | ||||| |||||||||||    
T  11623157 ttggcttaattgcacttttggccctctatgtttcaagaagttgcgattttggcccc 11623212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 823 - 915
Target Start/End: Original strand, 12291444 - 12291541
Alignment:
Q  823 gtttcaaaatgttgcaattttggcccc-tatt--aaaaaatagcaattttggcccctttcatc-caaaattgctgag-agatgccacgtgtcccaaaa 915  Q
    ||||||||||||||| ||||||||||| ||||  ||||||| |||||||||| || |||| || |||||||| |||| ||| |||| |||||||||||    
T  12291444 gtttcaaaatgttgcgattttggccccttattaaaaaaaatggcaattttggtccatttcgtcacaaaattgttgagaagacgccatgtgtcccaaaa 12291541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 793 - 859
Target Start/End: Complemental strand, 19282517 - 19282451
Alignment:
Q  793 attggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    ||||||||||||| |||||| | ||  || |||| ||||| ||||||||||| ||||||||||||||    
T  19282517 attggctaaactgtacttttcgtcccgtaagttttaaaatattgcaattttgacccctattaaaaaa 19282451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 631 - 725
Target Start/End: Original strand, 25819682 - 25819775
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgttta 725  Q
    |||||||||| | |||||||  ||| ||||||||  ||| ||||||||||||||||||||||        |||||||||||| ||||||||||||    
T  25819682 tttggctaaacctcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtga-cccctatgttta 25819775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 804 - 849
Target Start/End: Complemental strand, 2018623 - 2018578
Alignment:
Q  804 tgcacttttggccctttatgtttcaaaatgttgcaattttggcccc 849  Q
    |||||||||||||| ||||||||||| | ||||| |||||||||||    
T  2018623 tgcacttttggccccttatgtttcaagaagttgcgattttggcccc 2018578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 634 - 691
Target Start/End: Complemental strand, 6842384 - 6842327
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctat 691  Q
    |||||||  ||||||||  ||| ||||||||  |||||||||||||||||||||||||    
T  6842384 ggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctat 6842327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 849
Target Start/End: Complemental strand, 6842384 - 6842331
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc 849  Q
    ||||||| |||||||||  |||| || ||||||||| |||||||||||||||||    
T  6842384 ggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggcccc 6842331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 795 - 859
Target Start/End: Complemental strand, 8415353 - 8415288
Alignment:
Q  795 tggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctattaaaaaa 859  Q
    |||||||||||||||||| ||||  ||||||| | |||||||| ||||| || |||||||||||||    
T  8415353 tggctaaactgcacttttcgccccctatgttttataatgttgcgattttagctccctattaaaaaa 8415288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 689
Target Start/End: Complemental strand, 20864002 - 20863945
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccct 689  Q
    |||||| ||||||||| || | ||||||||||||||||| | || |||||||||||||    
T  20864002 ttggcttaaacgcactattcatcccctaagtttgcaaaattagcgattttggccccct 20863945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 3e-44; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 634 - 792
Target Start/End: Complemental strand, 183245 - 183089
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||        |||||||||||| |||  |||| ||||||||||    
T  183245 ggctaaaacgcgctttttgccccttaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgacccc--atgtctacccccttt 183148  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||    
T  183147 tgcaaaacgtcaattttgactcagtcaatcctatgtggcacgccacctgtgtatttatt 183089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 634 - 792
Target Start/End: Complemental strand, 2024353 - 2024196
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||  ||||||||        |||||||| ||||||| ||||| ||||||||||    
T  2024353 ggcttaaacccactttttaccccctaagtttgcaaaagttgcaattttgttcccctattaaaaaaa-tggcaaaaatgatcccttatgtctacccccttt 2024255  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||    
T  2024254 tgcaaaacgtcaattttgactcagtcaaccgtatgtggcatgccacctgtgtatttatt 2024196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 18695306 - 18695155
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcatc-caaaattgct 892  Q
    ||||||| ||||||||| ||||  ||||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  18695306 ggctaaagtgcacttttcgccccctatgtttcaaaatattgcgattttggccccctattaaaaaaatggcaattttggcccctttcatctcaaaattgct 18695207  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  18695206 gagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 18695155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 25556877 - 25557027
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa-tagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||||||||||| | |||| | ||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| |||||||||||    
T  25556877 ggctaaactgcacttatcgcccct-atgtttcaaaatgttgcaattttggccccctattaaaaaattggcaattttggcccctttcatcccaaaattgct 25556975  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||||||||||||||||  ||||||| || ||||||||||||||    
T  25556976 gagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaa 25557027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 796 - 912
Target Start/End: Original strand, 31055315 - 31055435
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||||||||||||| ||||  ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  31055315 ggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggccccctattaaaaaaatagcaattttggcccctttcatcccaaaattgct 31055414  T
Q  893 gag-agatgccacgtgtccca 912  Q
     || |||||||||||||||||    
T  31055415 cagaagatgccacgtgtccca 31055435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 645 - 789
Target Start/End: Complemental strand, 29353655 - 29353512
Alignment:
Q  645 actttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtc 744  Q
    |||||| |||| |||||||||||||||| |||||||||| ||||||||        |||||||||||| |||| ||||||||||| |||| |||||  ||    
T  29353655 acttttcaccctctaagtttgcaaaagtagcaattttggtcccctattaaaaaaaatggcaaaagtgaccccc-atgtttaccccattttacaaaagctc 29353557  T
Q  745 aattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    |||||||||||||||||||  |||||||| |||||||||||||||    
T  29353556 aattttgacccagtcaaccatatgtggcatgccacctgtgtattt 29353512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 634 - 761
Target Start/End: Complemental strand, 12950115 - 12949988
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||        |||||||||||| |||  ||||||| ||||||     
T  12950115 ggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattatggtcccctattaaaaaaaatggcaaaagtgacccctcatgtttagccccttc 12950016  T
Q  734 tgcaaaacgtcaattttgacccagtcaa 761  Q
    |||||||| |||||||||||| ||||||    
T  12950015 tgcaaaacctcaattttgacctagtcaa 12949988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 16900997 - 16901149
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||||||||||||| |||   |||||||||||||||||| ||||||  ||||||||  ||||||| ||||||||||||| |||||| ||||||||||    
T  16900997 ggctaaactgcacttttcgcctcctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccatttcatcccaaaattgc 16901096  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  16901097 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 16901149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 631 - 792
Target Start/End: Complemental strand, 38108141 - 38107980
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnn-tggcaaaagtgatcccctatgtttacccc 729  Q
    ||||||| |||| ||||||||||||||||||||||||| || || ||||||||||| |||||         |||||||| ||| ||| ||||| |||||     
T  38108141 tttggcttaaacccactttttaccccctaagtttgcaacagctgtaattttggccctctattaaaaaaaaatggcaaaaatgaccccttatgtctaccct 38108042  T
Q  730 cttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    ||||||||||||||||||||||| ||||| ||||  |||||||| ||||||||||||||||||    
T  38108041 cttttgcaaaacgtcaattttga-ccagtaaaccgtatgtggcatgccacctgtgtatttatt 38107980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 634 - 792
Target Start/End: Original strand, 2023332 - 2023487
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||||        |||||||||||| ||| ||| |    |||||||    
T  2023332 ggcttaaacccactatttaccccctaagtttacaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccatatct---accccttt 2023428  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    ||||||||||||||||| ||   |||||||  |||||||| ||||||||||||||||||    
T  2023429 tgcaaaacgtcaattttaacttggtcaaccatatgtggcatgccacctgtgtatttatt 2023487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 245898 - 245746
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaata--gcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||| ||||||||| |||   ||||||| |||||||||| ||||| | |||||||||||||| |  |||||||||||||| ||||||| ||||||||    
T  245898 ggctaaagtgcacttttcgccacctatgttttaaaatgttgcgattttagtcccctattaaaaaaaatggcaattttggcccccttcatccgaaaattgc 245799  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  245798 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 245746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 634 - 792
Target Start/End: Complemental strand, 16799974 - 16799820
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||  ||| ||||||||||||||||||||||||| |||||||||        |||||||||||| |||  | || |||||| |||    
T  16799974 ggcttaaacccactttttgtcccttaagtttgcaaaagttgcaattttgaccccctattaaaaaaa-tggcaaaagtgacccc--acgtctacccc-ttt 16799879  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    ||||||| |||||||||||| |||||||||  |||||||||||||||||| ||||||||    
T  16799878 tgcaaaaggtcaattttgactcagtcaaccatatgtggcacgccacctgtatatttatt 16799820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 634 - 786
Target Start/End: Original strand, 4533133 - 4533282
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||  | | |   |||||| ||||||||    
T  4533133 ggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttgg-cccctattaaaaaaaatggcaaaa--gctacatcatgttttcccccttt 4533229  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgta 786  Q
    ||||||||||| ||||||||| ||||||||  |||||||| ||||| ||||||    
T  4533230 tgcaaaacgtcgattttgaccgagtcaaccatatgtggcatgccacatgtgta 4533282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 634 - 761
Target Start/End: Complemental strand, 12935958 - 12935830
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt-nnnnnnnntggcaaaagtgatcccctatgtttaccccctt 732  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||         |||||||||||| |||  ||||||| ||||||    
T  12935958 ggctaaaatgcactttttgccccctaagtttgcaaaagttgcaattatggtcccctattaaaaaaaaatggcaaaagtgacccctcatgtttagcccctt 12935859  T
Q  733 ttgcaaaacgtcaattttgacccagtcaa 761  Q
     |||||||| |||||||||||| ||||||    
T  12935858 ctgcaaaacctcaattttgacctagtcaa 12935830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 642 - 762
Target Start/End: Original strand, 12948889 - 12949009
Alignment:
Q  642 cgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaac 741  Q
    ||||||||||| ||| ||||||| |||| ||||||||||||||||||||||        ||| |||||||| ||| |||||||| |||||||||||||||    
T  12948889 cgcactttttatcccttaagtttacaaaggttgcaattttggccccctattaaaaaaaatggtaaaagtgaccccttatgtttatccccttttgcaaaac 12948988  T
Q  742 gtcaattttgacccagtcaac 762  Q
     ||||||||||| | ||||||    
T  12948989 ctcaattttgactcggtcaac 12949009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 644 - 782
Target Start/End: Complemental strand, 4534110 - 4533971
Alignment:
Q  644 cactttttaccccctaagtttgcaaaagttgcaattttggccccctatt-nnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacg 742  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||  | |||| |||||| |||||||||| ||||||    
T  4534110 cactttttaccccctaagtttgcaaaagttgcaattttggccctttattaaaaaaaaatggcaaaagctaccccccatgttttcccccttttgtaaaacg 4534011  T
Q  743 tcaattttgacccagtcaaccccatgtggcacgccacctg 782  Q
    || ||||||||| |||||||   |||||||| ||||||||    
T  4534010 tcgattttgaccgagtcaactatatgtggcatgccacctg 4533971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 799 - 916
Target Start/End: Original strand, 40428642 - 40428764
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgctga 894  Q
    |||| ||||||||| ||||  |||||||||||||||||| ||||||| ||||||||  ||||||| |||||||||||||| ||| | |||||||||||||    
T  40428642 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaattttggcccccttcgtcccaaaattgctga 40428741  T
Q  895 g-agatgccacgtgtcccaaaaa 916  Q
    | ||| |||||||||||||||||    
T  40428742 gaagacgccacgtgtcccaaaaa 40428764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 634 - 753
Target Start/End: Original strand, 29993323 - 29993441
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||||||||||| |||| |||||||||||||||||| ||||||||| |||||||        |||||||||||| |||| ||||||| ||| |||    
T  29993323 ggcttaaacgcacttttaaccctctaagtttgcaaaagttgtaattttggcaccctatt-aaaaaaatggcaaaagtgaccccccatgtttatcccattt 29993421  T
Q  734 tgcaaaacgtcaattttgac 753  Q
    |||||||| |||||||||||    
T  29993422 tgcaaaacctcaattttgac 29993441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 799 - 896
Target Start/End: Complemental strand, 8646050 - 8645950
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaa--aaaatagcaattttggcccctttcat-ccaaaattgctgag 895  Q
    |||| ||||||||| |||| |||||||| |||||||||| ||||||||| |||||||  ||||| |||||||||||||||||||| ||||||||| ||||    
T  8646050 taaagtgcacttttcgccccttatgttttaaaatgttgcgattttggcctctattaaaaaaaatggcaattttggcccctttcatcccaaaattgttgag 8645951  T
Q  896 a 896  Q
    |    
T  8645950 a 8645950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 10379584 - 10379433
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||||||||||||| |||| |||||||| | |||||||||||||||| ||  |||| |||||||||||||||||| ||||||||| |||||||| ||    
T  10379584 ggctaaactgcacttttcgccccttatgttttataatgttgcaattttggtcctttattaaaaaaatagcaattttggtccctttcatcccaaaatttct 10379485  T
Q  893 gag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
     || ||||||||| |||| |  |||| ||| ||| |||||||||||||||||    
T  10379484 cagaagatgccacttgtctcagaaaaggggtcataatcgcaactttttgtaa 10379433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 642 - 762
Target Start/End: Original strand, 12934725 - 12934845
Alignment:
Q  642 cgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaac 741  Q
    ||||||||||| ||| ||||||| |||| ||||||||||||| ||||||||        ||| |||||||| ||| |||||||| |||||||||||||||    
T  12934725 cgcactttttatcccttaagtttacaaaggttgcaattttggtcccctattaaaaaaaatggtaaaagtgaccccttatgtttatccccttttgcaaaac 12934824  T
Q  742 gtcaattttgacccagtcaac 762  Q
     ||||||||||| | ||||||    
T  12934825 ctcaattttgactcggtcaac 12934845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 796 - 916
Target Start/End: Original strand, 26639037 - 26639162
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||| ||||||||| ||||  |||||||||||||||||  |||||| | |||||||  ||||||| |||||||||||||| ||||| |||||||||     
T  26639037 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgtgattttgactccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgt 26639136  T
Q  892 tgag-agatgccacgtgtcccaaaaa 916  Q
    |||| ||| |||||||||||||||||    
T  26639137 tgagaagacgccacgtgtcccaaaaa 26639162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 794 - 916
Target Start/End: Complemental strand, 36641444 - 36641322
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctatt--aaaaaatagcaattttggcccctttcatc-caaaattg 890  Q
    ||||||||||||||||||| ||||  ||||||||||||||||    ||| | ||||||||  ||||||||| |||||||||||||||||||  |||||||    
T  36641444 ttggctaaactgcacttttcgccccctatgtttcaaaatgtt----tttggccccctattaaaaaaaatagtaattttggcccctttcatcaaaaaattg 36641349  T
Q  891 ctgag-agatgccacgtgtcccaaaaa 916  Q
    ||||| ||| |||| ||||||||||||    
T  36641348 ctgagaagacgccatgtgtcccaaaaa 36641322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 796 - 912
Target Start/End: Complemental strand, 38408931 - 38408811
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa--tagcaattttggcccctttcat-ccaaaattgc 891  Q
    |||||||||||| |||| | ||| ||||||| | |||||||| ||||||| ||||||||||||||  |||||||||||| ||||||||| ||||||||||    
T  38408931 ggctaaactgcatttttcgtcctctatgttttataatgttgcgattttggtcccctattaaaaaaattagcaattttgg-ccctttcatcccaaaattgc 38408833  T
Q  892 tgag-agatgccacgtgtccca 912  Q
    | || |||||||||||||||||    
T  38408832 tcagaagatgccacgtgtccca 38408811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 645 - 754
Target Start/End: Original strand, 5014029 - 5014138
Alignment:
Q  645 actttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtc 744  Q
    |||||||||||  ||||||||||||||||| |||||||| | ||||||        |||||||||||| |||  ||||||| ||||||||||||||| ||    
T  5014029 actttttaccctttaagtttgcaaaagttgtaattttggtctcctattaaaaaaaatggcaaaagtgacccctcatgtttagccccttttgcaaaacctc 5014128  T
Q  745 aattttgacc 754  Q
    ||||||||||    
T  5014129 aattttgacc 5014138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 727 - 792
Target Start/End: Original strand, 38107219 - 38107284
Alignment:
Q  727 ccccttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    ||||||||||||||||||||||||||| | |||||||  |||||||| ||||||||||||||||||    
T  38107219 ccccttttgcaaaacgtcaattttgactcggtcaaccatatgtggcatgccacctgtgtatttatt 38107284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 667 - 782
Target Start/End: Original strand, 16793564 - 16793679
Alignment:
Q  667 aaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtcaattttgacccagtcaacccca 766  Q
    ||||||||||||||||||| ||||||        |||||||||| |  ||  |||| |||||||||||||||||  ||||||||||| |||||||||  |    
T  16793564 aaaagttgcaattttggcctcctattaaaaaaaatggcaaaagtaactcctcatgtctacccccttttgcaaaagatcaattttgactcagtcaaccata 16793663  T
Q  767 tgtggcacgccacctg 782  Q
    ||||||||||||||||    
T  16793664 tgtggcacgccacctg 16793679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 634 - 753
Target Start/End: Original strand, 29352490 - 29352609
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||| |||| |||| ||||||||||| |||||||||||||||||||        |||||||| ||| |||| || ||||||||||||    
T  29352490 ggcttaaacccacttttcaccctctaaatttgcaaaagtagcaattttggccccctattaaaaaaaatggcaaaaatgaccccccatatttacccccttt 29352589  T
Q  734 tgcaaaacgtcaattttgac 753  Q
    |||||||  | |||||||||    
T  29352590 tgcaaaagcttaattttgac 29352609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 786 - 896
Target Start/End: Complemental strand, 31648298 - 31648184
Alignment:
Q  786 atttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctatt--aaaaaatagcaattttggcccctttcat- 881  Q
    ||||||| | ||||||||||||||||| | ||  |||||||||||||||||| |||||||||  |||||  ||||||| ||||||||| ||||||||||     
T  31648298 atttattttaggctaaactgcacttttcgtcccctatgtttcaaaatgttgcgattttggccttctattaaaaaaaatggcaattttgacccctttcatc 31648199  T
Q  882 ccaaaattgctgaga 896  Q
    |||||| ||||||||    
T  31648198 ccaaaactgctgaga 31648184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 794 - 861
Target Start/End: Complemental strand, 40428943 - 40428876
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaata 861  Q
    ||||||||||| ||||||| ||||| || ||||||||||||||| |||||| ||||||||||||||||    
T  40428943 ttggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgacccctattaaaaaata 40428876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 790 - 916
Target Start/End: Original strand, 16307471 - 16307601
Alignment:
Q  790 attattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa-tagcaattttggcccctttcatc-caaa 886  Q
    ||||| || ||||||||||||||  |||  ||||||| |||||||||  ||||||| |||||||||||||| | |||||||||||||||||||||  |||    
T  16307471 attataggttaaactgcacttttcaccccctatgttttaaaatgttgtgattttggtcccctattaaaaaaatggcaattttggcccctttcatcttaaa 16307570  T
Q  887 attgctgag-agatgccacgtgtcccaaaaa 916  Q
    ||||||||| ||| ||||| ||||| |||||    
T  16307571 attgctgagaagacgccacatgtccaaaaaa 16307601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 796 - 850
Target Start/End: Original strand, 23765420 - 23765474
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccct 850  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  23765420 ggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccct 23765474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 796 - 850
Target Start/End: Original strand, 23815268 - 23815322
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccct 850  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  23815268 ggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccct 23815322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 622 - 692
Target Start/End: Complemental strand, 28223733 - 28223663
Alignment:
Q  622 cattttatatttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||||| | ||||||| |||| ||||||||| || |||| |||||||||||||||||||||||||||||||    
T  28223733 cattttttttttggcttaaactcactttttatcctctaactttgcaaaagttgcaattttggccccctatt 28223663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 19169647 - 19169495
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctatt--aaaaaatagcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||| ||||||||| | ||  ||| |||||||||||||  ||||||||| ||||||  ||||||| |||||||||||||| || |||| ||||||||    
T  19169647 ggctaaagtgcacttttcgtcccctatatttcaaaatgttgtgattttggcctcctattaaaaaaaatggcaattttggcccccttgatcctaaaattgc 19169548  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| ||||||||| | |||||  ||||||| || ||||||||||||||    
T  19169547 tgagaagacgccacgtgttcaaaaaaatgggccataattgcaactttttgtaa 19169495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 692
Target Start/End: Complemental strand, 42877139 - 42877081
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||||||||||||||||| || | ||||||||||||||||| ||||||| |||||||||    
T  42877139 ggctaaaacgcactttttgcctcttaagtttgcaaaagttgtaattttgaccccctatt 42877081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 702 - 763
Target Start/End: Original strand, 16228849 - 16228909
Alignment:
Q  702 ggcaaaagtgatcccctatgtttacccccttttgcaaaacgtcaattttgacccagtcaacc 763  Q
    ||||||||||| || | |||||||| |||||||||||||| |||||||||||||||||||||    
T  16228849 ggcaaaagtgaccctc-atgtttacacccttttgcaaaacctcaattttgacccagtcaacc 16228909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 687
Target Start/End: Original strand, 9070679 - 9070727
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggcccc 687  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  9070679 aaacgcactttttaccctctaattttgcaaaagttgtaattttggcccc 9070727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 23765693 - 23765629
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || |||| |||||||||||||||||| ||||||||||||||    
T  23765693 ggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaa 23765629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 23815541 - 23815477
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || |||| |||||||||||||||||| ||||||||||||||    
T  23815541 ggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaa 23815477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 799 - 859
Target Start/End: Complemental strand, 37961549 - 37961489
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    ||||||||||||||  |||  || |||||||||||||||||||||||| ||||||||||||    
T  37961549 taaactgcacttttcaccccctaagtttcaaaatgttgcaattttggctcctattaaaaaa 37961489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 692
Target Start/End: Original strand, 38107150 - 38107198
Alignment:
Q  644 cactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  38107150 cactttttacctcctaagtttgcaaaaattgcaattttgaccccctatt 38107198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 705 - 781
Target Start/End: Original strand, 42876210 - 42876286
Alignment:
Q  705 aaaagtgatcccctatgtttacccccttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacct 781  Q
    |||||||| || ||||||||| ||||||||||||||| |||||||||||| ||| || || ||||| || |||||||    
T  42876210 aaaagtgaccctctatgtttagccccttttgcaaaacctcaattttgaccaagttaatcctatgtgtcatgccacct 42876286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 632 - 687
Target Start/End: Complemental strand, 5015186 - 5015131
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggcccc 687  Q
    |||||| |||| ||||||||| ||| |||||||| |||||||||||||||||||||    
T  5015186 ttggcttaaactcactttttaacccttaagtttgtaaaagttgcaattttggcccc 5015131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 634 - 688
Target Start/End: Complemental strand, 9072329 - 9072275
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccc 688  Q
    |||| |||||||||| |||||| |||| ||||||||||||||||||||| |||||    
T  9072329 ggcttaaacgcacttcttaccctctaactttgcaaaagttgcaattttgaccccc 9072275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 823 - 937
Target Start/End: Original strand, 17825525 - 17825646
Alignment:
Q  823 gtttcaaaatgttgcaattttggccccta-tta-aaaaatagcaattttggcccctttcatc-caaaattgctgag-agatgccacgtgtcccaaaaa-- 916  Q
    |||||| ||||||||||||||| |||| | ||| ||||||  |||||||||||||||||||| |||||||  | || ||| |||||||||||||||||      
T  17825525 gtttcagaatgttgcaattttgacccccaattagaaaaattacaattttggcccctttcatctcaaaattttttagaagacgccacgtgtcccaaaaaag 17825624  T
Q  917 gggccat-atcgcaactttttg 937  Q
    ||||||| ||||||||||||||    
T  17825625 gggccataatcgcaactttttg 17825646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 799 - 859
Target Start/End: Original strand, 245599 - 245660
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||| ||||||| ||||| || |||||||||| |||||||||||| ||||||||||||||    
T  245599 taaacttcacttttcgccctctaagtttcaaaatattgcaattttggccccctattaaaaaa 245660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 845
Target Start/End: Original strand, 31576491 - 31576542
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg 845  Q
    ||||||||||||||||||| | ||  || |||||||||||||||||||||||    
T  31576491 ttggctaaactgcacttttcgacccctaagtttcaaaatgttgcaattttgg 31576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 796 - 916
Target Start/End: Complemental strand, 2373449 - 2373324
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctattaaaaaatag--caattttggcccctttcat-ccaaaattgc 891  Q
    |||||||||||||||||   ||  || ||||||||| ||||| ||||||||| |||||| ||||| ||  |||||||||||||| || | ||||||||||    
T  2373449 ggctaaactgcacttttcaacccctaagtttcaaaaagttgcgattttggcctcctatttaaaaaaaggacaattttggcccctgtcgtcccaaaattgc 2373350  T
Q  892 tgag-agatgccacgtgtcccaaaaa 916  Q
    | || ||| |||||||||||| ||||    
T  2373349 taagaagacgccacgtgtccccaaaa 2373324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 794 - 859
Target Start/End: Original strand, 18695002 - 18695068
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaa 859  Q
    ||||||||||| ||||||| ||||| || |||| |||||||||| ||||||  ||||||||||||||    
T  18695002 ttggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaa 18695068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 634 - 688
Target Start/End: Complemental strand, 29994346 - 29994292
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccc 688  Q
    |||| ||||| ||| ||||| |||||||||||||||||||| ||||||| |||||    
T  29994346 ggcttaaacgtactatttactccctaagtttgcaaaagttgtaattttgaccccc 29994292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 863 - 937
Target Start/End: Original strand, 38476540 - 38476618
Alignment:
Q  863 caattttggcccctttcatcc-aaaattgctgaga-gatgccacgtgtccc-aaaaagggccat-atcgcaactttttg 937  Q
    |||||||||||| |||| ||| ||||||||||||| || |||||||||||| |||||||| ||| ||||||||||||||    
T  38476540 caattttggcccatttcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaagggtcataatcgcaactttttg 38476618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 883
Target Start/End: Complemental strand, 7836012 - 7835923
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctatt-aaaaaatagcaattttggcccctttcatcc 883  Q
    ||||||||||||||||| |||  |||||||| ||||| |||| ||||||||  |||||| ||||||| |||||| | ||| |||||||||    
T  7836012 ggctaaactgcacttttcgcctcttatgttttaaaatattgcgattttggcttcctattaaaaaaatggcaattctagcctctttcatcc 7835923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 5e-43; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 634 - 792
Target Start/End: Complemental strand, 26363652 - 26363495
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||        |||||||||||| |||| || | ||||||||||    
T  26363652 ggctaaaacgcactttttgccccctaaatttgcagaagttgcaattttggccccctattaaaaaaa-tggcaaaagtgacccccaatatctacccccttt 26363554  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  26363553 tgcaaaacgtcaattttgactcagtcaaccatatgtggcacgccacctgtgtatttatt 26363495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 645 - 789
Target Start/End: Complemental strand, 1192161 - 1192017
Alignment:
Q  645 actttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtc 744  Q
    |||||| |||| |||||||||||||||| |||||||||||||||||||        |||||||||||| |||| ||||||||||||||||||||||  ||    
T  1192161 acttttcaccctctaagtttgcaaaagtagcaattttggccccctattaaaaaaaatggcaaaagtgaccccccatgtttacccccttttgcaaaagctc 1192062  T
Q  745 aattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    |||||||||||||||||||  |||||||| |||||||||||||||    
T  1192061 aattttgacccagtcaaccatatgtggcatgccacctgtgtattt 1192017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 19391388 - 19391539
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaa--aatagcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  19391388 ggctaaactgcacttttcgcccct-atgtttcaaaatgttgcaattttggtcccctattaaaaaaaatagcaattttggcccctttcatccaaaaattgc 19391486  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  19391487 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 19391539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 5192272 - 5192423
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaa-aaatagcaattttggcccctttcatcc-aaaattgct 892  Q
    ||||||||| ||||||| ||||  |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  5192272 ggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaataaatagcaattttggccccttttatccaaaaattgct 5192371  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  5192372 gagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 5192423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 634 - 795
Target Start/End: Original strand, 45020585 - 45020745
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||        |||||||||  | |||| |||||| ||||||||    
T  45020585 ggcttaaactcactttttaccctctaagtttgcaaaagttgcaatttttgccccctattaaaaaaaatggcaaaagctaccccc-atgttttcccccttt 45020683  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttattatt 795  Q
    ||||||||||| ||||||||| ||||||||  |||||||| |||||||| |||||| |||||    
T  45020684 tgcaaaacgtcgattttgaccgagtcaaccatatgtggcatgccacctgggtattttttatt 45020745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 634 - 789
Target Start/End: Complemental strand, 39582056 - 39581901
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||        |||||||||||| || | |||||||||| |||     
T  39582056 ggcttaaacacactttttactccctaagtttgcaaaagttgcaattttggcccccttttaaaaaaaatggcaaaagtgaccctccatgtttaccctcttc 39581957  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    ||||||||  ||||||||||||||||||||  |  ||||| |||||||||||||||    
T  39581956 tgcaaaaccccaattttgacccagtcaaccatacttggcatgccacctgtgtattt 39581901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 33895677 - 33895526
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa--tagcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||||||||||||| ||||  ||| ||| |||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| |||||| |    
T  33895677 ggctaaactgcacttttcgccccctatattttaaaatgttgcaattttggtcccctattaaaaaaaatagcaattttggcccctttcatccaaaaatttc 33895578  T
Q  892 tgag-agatgccacgtgtcc-caaaaagggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||  |||||||||||| || ||||||||||||||    
T  33895577 tgagaagacgccacgtgtccaaaaaaagggccataattgcaactttttgtaa 33895526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 645 - 789
Target Start/End: Complemental strand, 41774824 - 41774681
Alignment:
Q  645 actttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtc 744  Q
    |||||| |||| |||||||||||||||| ||||||||| |||||||||        |||||||||||| |||| || ||||| |||||||||||||  ||    
T  41774824 acttttcaccctctaagtttgcaaaagtagcaattttgaccccctattaaaaaaaatggcaaaagtgaccccc-atatttactcccttttgcaaaagctc 41774726  T
Q  745 aattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    |||||||||||||||||||  |||||||| |||||||||||||||    
T  41774725 aattttgacccagtcaaccatatgtggcatgccacctgtgtattt 41774681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 791 - 940
Target Start/End: Original strand, 4807595 - 4807752
Alignment:
Q  791 ttattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcatcc-aaa 886  Q
    |||| ||||||||||||||||| |||   |||||||||||||||||||||||||| ||||||||  ||||||||||||||||||| | |||||||| |||    
T  4807595 ttataggctaaactgcacttttcgcctcctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatagcaattttggcacatttcatccaaaa 4807694  T
Q  887 attgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||||| ||| ||||||||| |||||||  ||||||| |||||||||||||||||    
T  4807695 attactgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaa 4807752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 632 - 753
Target Start/End: Original strand, 23753257 - 23753378
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccct 731  Q
    |||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||   || || |||| |||||    
T  23753257 ttggcttaaacacactttttaccccctaagtttgtaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgacatcccatatttatcccct 23753356  T
Q  732 tttgcaaaacgtcaattttgac 753  Q
    ||||||||||||||||||||||    
T  23753357 tttgcaaaacgtcaattttgac 23753378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 799 - 940
Target Start/End: Original strand, 30784268 - 30784416
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcatcc-aaaattgctga 894  Q
    |||||| ||||||| ||||  || ||||||||||||||||||||||| ||||||||  ||||||| |||||||||||||| ||||||| |||||||||||    
T  30784268 taaacttcactttttgccccctaggtttcaaaatgttgcaattttggtcccctattaaaaaaaatggcaattttggccccattcatccaaaaattgctga 30784367  T
Q  895 g-agatgccacgtgtccc-aaaaagggccat-atcgcaactttttgtaa 940  Q
    | ||| | |||||||||| |||||||||||| |||||||||||||||||    
T  30784368 gaagaagtcacgtgtcccaaaaaagggccataatcgcaactttttgtaa 30784416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 634 - 786
Target Start/End: Complemental strand, 45021705 - 45021554
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||| |||||||||        || ||||||  | |||| |||||| ||||||||    
T  45021705 ggcttaaactcactttttaccccctaagtttgtaaaagttgcaattttgaccccctattaaaaaaaatgacaaaagcta-cccccatgttttcccccttt 45021607  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgta 786  Q
    ||||||||||| ||||||||| ||||||||  |||||||| ||||| ||||||    
T  45021606 tgcaaaacgtcgattttgaccgagtcaaccatatgtggcatgccacatgtgta 45021554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 799 - 940
Target Start/End: Original strand, 12723264 - 12723413
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaa--aatagcaattttggcccctttcat-ccaaaattgctga 894  Q
    ||||||||||||||  |||  |||||||||||| |||||||||||| |||| ||||||||  |||||||||||||||||||||||| | |||||||||||    
T  12723264 taaactgcacttttcaccccctatgtttcaaaacgttgcaattttgaccccctattaaaaaaaatagcaattttggcccctttcatgcaaaaattgctga 12723363  T
Q  895 g-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    | ||| |||| ||||||||||||  || |||| |||||||||||||||||    
T  12723364 gaagacgccatgtgtcccaaaaaagggaccataatcgcaactttttgtaa 12723413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 17648546 - 17648395
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctatt--aaaaaatagcaattttggcccctttcatcc-aaaattgc 891  Q
    |||||| |||||||||| ||||  ||| ||||||||||||||| ||||||| || ||||  |||||||||||| ||||||||||||||||| ||||||||    
T  17648546 ggctaatctgcacttttcgccccctatctttcaaaatgttgcagttttggctccttattaaaaaaaatagcaa-tttggcccctttcatccaaaaattgc 17648448  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| ||||||||||| |||||  ||||||| |||||||||||||||||    
T  17648447 tgagaagaggccacgtgtcctaaaaagggggccataatcgcaactttttgtaa 17648395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 634 - 763
Target Start/End: Original strand, 6571326 - 6571455
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||| ||| |||||||||||||||||||||||||   |||||||        |||||||||||||||| |||||||| ||| |||    
T  6571326 ggcttaaactcactttttatcccttaagtttgcaaaagttgcaattttgattccctattaaaaaaaatggcaaaagtgatcccttatgtttagcccattt 6571425  T
Q  734 tgcaaaacgtcaattttgacccagtcaacc 763  Q
    |||||||| ||||||||||||  |||||||    
T  6571426 tgcaaaacctcaattttgacctggtcaacc 6571455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 634 - 774
Target Start/End: Complemental strand, 28301706 - 28301567
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||| | ||||| ||        | |||||||||| |||  ||||||| |||||||    
T  28301706 ggcttaaacgcactttttacctcctaagtttgcaaaagttgcaattttag-ccccttttaaaaaaaatagcaaaagtgacccctcatgtttagccccttt 28301608  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcac 774  Q
    ||||||||  |||||||||||  |||||| |||||||||||    
T  28301607 tgcaaaactccaattttgacctggtcaacgccatgtggcac 28301567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 796 - 917
Target Start/End: Original strand, 21929847 - 21929973
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||| |||| |||| ||||  |||||||||||| ||||| |||||||| |||||||  ||||||| |||||||||||||| ||||| ||||||||||    
T  21929847 ggctaaagtgcatttttcgccccctatgtttcaaaacgttgcgattttggctccctattaaaaaaaattgcaattttggcccccttcatcccaaaattgc 21929946  T
Q  892 tgag-agatgccacgtgtcccaaaaag 917  Q
    |||| ||| ||||||||||||||||||    
T  21929947 tgagaagacgccacgtgtcccaaaaag 21929973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 8802400 - 8802552
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||| ||||||||| | ||  ||||||| |||||||||| ||||||| ||||||||  ||||||| |||||||||||||| ||||| ||||||||||    
T  8802400 ggctaaagtgcacttttcgtcccgtatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgc 8802499  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| ||||| ||| |||||||  ||||||| |||||||||||||||||    
T  8802500 tgagaagacgccacatgttccaaaaaaggggccataatcgcaactttttgtaa 8802552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 19924569 - 19924417
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tatt--aaaaaatagcaattttggcccctttcatc-caaaattgc 891  Q
    ||||||||||||||||| | ||  ||||||| |||||||| ||||||||||||| ||||  ||||||| | ||||||||||||||| |||  ||||||||    
T  19924569 ggctaaactgcacttttcgtcccctatgttttaaaatgttacaattttggccccttattaaaaaaaattgtaattttggccccttttatcaaaaaattgc 19924470  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  19924469 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaa 19924417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 634 - 753
Target Start/End: Original strand, 26830325 - 26830443
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||||||||| ||||||||| || ||||||||| |||||||||        |||||||||| |||||| |||||||||||||||    
T  26830325 ggcttaaacacactttttaccccctaggtttgcaaacgtagcaattttgaccccctattaaaaaaa-tggcaaaagttatcccccatgtttacccccttt 26830423  T
Q  734 tgcaaaacgtcaattttgac 753  Q
    ||||||||  ||||||||||    
T  26830424 tgcaaaaccccaattttgac 26830443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 632 - 753
Target Start/End: Original strand, 1190967 - 1191087
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccct 731  Q
    |||||| |||| ||||||| |||| |||||||||||||||| ||||||||||| |||||||        |||||||||||| |||| ||||||||||| |    
T  1190967 ttggcttaaactcacttttcaccctctaagtttgcaaaagtagcaattttggctccctattaaaaaaaatggcaaaagtga-cccccatgtttacccctt 1191065  T
Q  732 tttgcaaaacgtcaattttgac 753  Q
    |||||||||  |||||||||||    
T  1191066 tttgcaaaagttcaattttgac 1191087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 4518869 - 4519019
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcatc-caaaattgct 892  Q
    ||||||| ||||||||| ||||  ||| ||| ||||| |||| ||||||| |||||||| ||||||| |||||||||||||| |||||| |||||||| |    
T  4518869 ggctaaagtgcacttttcgccccctatattttaaaatattgcgattttggccccctattaaaaaaatggcaattttggcccc-ttcatctcaaaattgtt 4518967  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  4518968 gagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 4519019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 634 - 789
Target Start/End: Original strand, 36984146 - 36984298
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||||  | ||| ||         ||||||||||| |||  ||||||||| |||||    
T  36984146 ggcttaaacgcactttttacctactaagtttgcaaaagttgcaattttgatctccttttaaaaaaac-ggcaaaagtgacccc--atgtttaccgccttt 36984242  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    |||||||| ||||||||||| || ||||||  ||||| || |||||||||||||||    
T  36984243 tgcaaaacctcaattttgactcaatcaaccatatgtgtcatgccacctgtgtattt 36984298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 794 - 940
Target Start/End: Complemental strand, 38630361 - 38630207
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaata--gcaattttggcccctttcatc-caaaatt 889  Q
    ||||||||| || | |||| ||| | ||||||| |||||||||| |||||| |||| |||||||||| |  |||||||||||||| |||||| |||||||    
T  38630361 ttggctaaagtgtatttttcgccttctatgttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccccttcatctcaaaatt 38630262  T
Q  890 gctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||||| ||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  38630261 gctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaa 38630207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 624 - 692
Target Start/End: Complemental strand, 45519558 - 45519490
Alignment:
Q  624 ttttatatttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||||| || |||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  45519558 ttttattttaggcttaaacgcactttttaccctctaactttgcaaaagttgcaattttggccccctatt 45519490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 799 - 940
Target Start/End: Original strand, 22452176 - 22452325
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaatttt-ggcccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgctga 894  Q
    |||||||||||||| ||||  ||| ||| |||||||||||||||| | ||||||||  ||||||| | ||||||||||| |||| | |||||||||||||    
T  22452176 taaactgcacttttcgccccctatattttaaaatgttgcaattttagccccctattaaaaaaaatggtaattttggcccatttcgtcccaaaattgctga 22452275  T
Q  895 g-agatgccacgtgtccc--aaaaagggccata-tcgcaactttttgtaa 940  Q
    | ||| ||||||||||||  ||||||||| ||| ||||||||||||||||    
T  22452276 gaagacgccacgtgtcccaaaaaaagggctatattcgcaactttttgtaa 22452325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 634 - 750
Target Start/End: Complemental strand, 14055510 - 14055394
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt-nnnnnnnntggcaaaagtgatcccctatgtttaccccctt 732  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||||||| ||||||||          || |||||||| ||||||||| |||||||||    
T  14055510 ggcttaaacacactttctaccccctaagtttgcaaaagttgcaattttgg-cccctattaaaaaaaaaaggtaaaagtgaccccctatgtctaccccctt 14055412  T
Q  733 ttgcaaaacgtcaatttt 750  Q
    ||| ||||||||||||||    
T  14055411 ttgtaaaacgtcaatttt 14055394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 644 - 763
Target Start/End: Original strand, 41944365 - 41944482
Alignment:
Q  644 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgt 743  Q
    |||||||||||| |||||||||||||||||||||||||| || ||||||        ||||||||  | | ||| || ||| ||||||||||||||||||    
T  41944365 cactttttaccctctaagtttgcaaaagttgcaattttgacctcctattaaaaaaaatggcaaaa--gctaccccatattttcccccttttgcaaaacgt 41944462  T
Q  744 caattttgacccagtcaacc 763  Q
    | ||||||||| ||||||||    
T  41944463 cgattttgaccgagtcaacc 41944482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 823 - 937
Target Start/End: Complemental strand, 1824879 - 1824760
Alignment:
Q  823 gtttcaaaatgttgcaattttggcccc-tattaaaaaatagcaattttggcccctttcatc-caaaattgctgag-agatgccacgtgtcccaaaa-agg 918  Q
    |||| ||||||||| |||||||||||| ||||||||||   ||||||||||||||||| || |||||||| |||| ||| |||||||||||||||| | |    
T  1824879 gttttaaaatgttgtaattttggccccctattaaaaaaagacaattttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaacaag 1824780  T
Q  919 gccata-tcgcaactttttg 937  Q
    |||||| |||||||||||||    
T  1824779 gccatactcgcaactttttg 1824760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 823 - 937
Target Start/End: Complemental strand, 1859324 - 1859205
Alignment:
Q  823 gtttcaaaatgttgcaattttggcccc-tattaaaaaatagcaattttggcccctttcatc-caaaattgctgag-agatgccacgtgtcccaaaa-agg 918  Q
    |||| ||||||||| |||||||||||| ||||||||||   ||||||||||||||||| || |||||||| |||| ||| |||||||||||||||| | |    
T  1859324 gttttaaaatgttgtaattttggccccctattaaaaaaagacaattttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaacaag 1859225  T
Q  919 gccata-tcgcaactttttg 937  Q
    |||||| |||||||||||||    
T  1859224 gccatactcgcaactttttg 1859205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 631 - 750
Target Start/End: Complemental strand, 35563545 - 35563428
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccc 730  Q
    ||||||| ||||||| ||| ||| ||||||||||||||||||||||||||| || |||||||        ||| |||||||| ||||||||| || ||||    
T  35563545 tttggcttaaacgcattttctactccctaagtttgcaaaagttgcaattttagctccctattaaaaaaaatggtaaaagtga-cccctatgtcta-cccc 35563448  T
Q  731 ttttgcaaaacgtcaatttt 750  Q
    ||||| ||||||||||||||    
T  35563447 ttttgtaaaacgtcaatttt 35563428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 23565393 - 23565241
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaatag--caattttggcccctttcatcc-aaaattgc 891  Q
    |||||||||  |||||| ||||  ||||||| ||||||||||||||||| |||| |||||||||| |   ||||||||||||||||||||| ||||||||    
T  23565393 ggctaaactagacttttcgccccctatgttttaaaatgttgcaattttgaccccctattaaaaaaaatgacaattttggcccctttcatccaaaaattgc 23565294  T
Q  892 tgag-agatgccac--gtgtcccaaaaagggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||  || |   |||||||||||| |||||||||||||||||    
T  23565293 tgagaagacgccacatgtttaaaaaaaagggccataatcgcaactttttgtaa 23565241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 634 - 692
Target Start/End: Complemental strand, 26831500 - 26831442
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||    
T  26831500 ggcttaaacacactttttaccccctaagtttgcaaaagtagtaattttggccccctatt 26831442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 639 - 763
Target Start/End: Original strand, 39580797 - 39580920
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnn-tggcaaaagtgatcccctatgtttacccccttttgca 737  Q
    |||| ||||||||||||| ||||||||||||||||  ||||||| |||||| ||         |||||||||||| | |  |||||||| ||||||||||    
T  39580797 aaactcactttttaccccttaagtttgcaaaagttataattttgacccccttttaaaaaaaaatggcaaaagtgacctc--atgtttactcccttttgca 39580894  T
Q  738 aaacgtcaattttgacccagtcaacc 763  Q
    |||| |||||||||||||||||||||    
T  39580895 aaacatcaattttgacccagtcaacc 39580920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 634 - 779
Target Start/End: Complemental strand, 23754433 - 23754289
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| ||||| |||||| |||| |||||||||||||||||||||||| |||||||||||        || ||||||||| |||| ||| ||| ||| |||    
T  23754433 ggcttaaacgtacttttaaccctctaagtttgcaaaagttgcaatttgggccccctattaaaaaaaatgacaaaagtgaccccccatg-ttatccctttt 23754335  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccac 779  Q
    |||||||| |||||||| ||  |||||| |  ||||| ||||||||    
T  23754334 tgcaaaacctcaattttaacttagtcaaacttatgtgtcacgccac 23754289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 634 - 779
Target Start/End: Original strand, 28301344 - 28301489
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||||| |||| ||||| ||||||||||||||| ||||||| ||        |||||||||||  |||   |||||| |||||||    
T  28301344 ggcttaaacacactttttacctcctatgtttgaaaaagttgcaattttagcccccttttaaaaaaaatggcaaaagtggcccctcgtgtttagccccttt 28301443  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccac 779  Q
    ||||||||  |||||||||||  |||||| ||||||| || |||||    
T  28301444 tgcaaaactccaattttgacctggtcaacgccatgtgtcaagccac 28301489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 647 - 792
Target Start/End: Complemental strand, 4378084 - 4377941
Alignment:
Q  647 tttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtcaa 746  Q
    ||||| ||||||||||||  ||| |||| |||||||||||| ||||        |||||||||||| | || |||| |||||| ||||||||||||||||    
T  4378084 tttttgccccctaagtttataaaggttgtaattttggccccttattaaaaaaa-tggcaaaagtgacctcccatgtctacccc-ttttgcaaaacgtcaa 4377987  T
Q  747 ttttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    ||| ||| |  |||||   |||||||||||||||||||||||||||    
T  4377986 tttcgactcgatcaactgtatgtggcacgccacctgtgtatttatt 4377941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 634 - 682
Target Start/End: Original strand, 44296720 - 44296768
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttg 682  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||    
T  44296720 ggcttaaacgcactttttaccccttaagtttgcaaaagttgcaattttg 44296768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 630 - 753
Target Start/End: Complemental strand, 44297875 - 44297756
Alignment:
Q  630 atttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccc 729  Q
    |||||||| ||||||| |||| |||||||||||||| |||||||||||||||||  |||| ||        ||||||||||||  ||||||||||| |||    
T  44297875 atttggcttaaacgcatttttcaccccctaagtttgtaaaagttgcaattttggttccct-tttaaaaaaatggcaaaagtga--ccctatgttta-ccc 44297780  T
Q  730 cttttgcaaaacgtcaattttgac 753  Q
    |||||| ||||| |||||||||||    
T  44297779 cttttgtaaaacctcaattttgac 44297756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 634 - 754
Target Start/End: Original strand, 45518168 - 45518288
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||| || |||| |||||| |||||||||||||| |||||||||        |||||||| ||| |||| || |||| |||||||    
T  45518168 ggcttaaacacactttttatcctctaactttgcagaagttgcaattttgaccccctattaaaaaaagtggcaaaaatgaccccccatatttaaccccttt 45518267  T
Q  734 tgcaaaacgtcaattttgacc 754  Q
    |||||||  ||||||||||||    
T  45518268 tgcaaaagatcaattttgacc 45518288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 790 - 859
Target Start/End: Complemental strand, 8802709 - 8802639
Alignment:
Q  790 attattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||||||||||||  |||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  8802709 attattggctaaactttacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 8802639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 14054118 - 14054168
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggc 684  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||    
T  14054118 ggcttaaacacactttttacctcctaagtttgcaaaagttgcaattttggc 14054168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 796 - 916
Target Start/End: Original strand, 21666274 - 21666399
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctatt--aaaaaatagcaattttggcccctttcatc-caaaattgc 891  Q
    ||||||||||||||||| | || ||| ||||| ||||||||  ||||| || |||||||  ||||||| |||||||||||||| ||| || |||||||||    
T  21666274 ggctaaactgcacttttcgtcccttaagtttcgaaatgttgtgattttagctccctattaaaaaaaatggcaattttggcccccttcgtctcaaaattgc 21666373  T
Q  892 tgag-agatgccacgtgtcccaaaaa 916  Q
    |||| ||| |||| ||||||||||||    
T  21666374 tgagaagacgccatgtgtcccaaaaa 21666399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 692
Target Start/End: Original strand, 22255574 - 22255632
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||||| ||| ||||    
T  22255574 ggcttaaacgcacttttcgccccctaagtttgcaaaagttgcaattttggtcccatatt 22255632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 692
Target Start/End: Original strand, 39688342 - 39688400
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| |||| ||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  39688342 ggcttaaacccacttttgaccccttaagtttgcaaaagttgcaattttggtcccctatt 39688400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 795 - 859
Target Start/End: Complemental strand, 30784569 - 30784504
Alignment:
Q  795 tggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaa 859  Q
    |||||||||| ||||||| ||||| || ||||||||||||||| ||||||||||| ||||||||||    
T  30784569 tggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccttattaaaaaa 30784504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 3380199 - 3380263
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctattaaaaaa 859  Q
    |||||||||||| ||||  ||||||| ||||||||||||||| |||||||| |||||||||||||    
T  3380199 ggctaaactgcatttttcaccctttaagtttcaaaatgttgcgattttggctccctattaaaaaa 3380263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 19392870 - 19392806
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  19392870 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 19392806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 23565121 - 23565185
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaa 859  Q
    |||||||||  |||||| |||| ||||||||||||||||||||||||||  ||||||||||||||    
T  23565121 ggctaaactagacttttcgccccttatgtttcaaaatgttgcaattttgaccccctattaaaaaa 23565185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 687
Target Start/End: Original strand, 35562249 - 35562297
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggcccc 687  Q
    |||| |||||||||||| |||||||||||||||||||||||||| ||||    
T  35562249 aaacacactttttaccctctaagtttgcaaaagttgcaattttgacccc 35562297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 645 - 752
Target Start/End: Complemental strand, 36985347 - 36985242
Alignment:
Q  645 actttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtc 744  Q
    |||||| |||| ||||||||||||||||||||||||| ||||||| ||        ||||||||||||  |||||||||||||   |||||||||||  |    
T  36985347 acttttcaccctctaagtttgcaaaagttgcaattttagcccccttttaaaaaaaatggcaaaagtga--ccctatgtttaccatattttgcaaaacacc 36985250  T
Q  745 aattttga 752  Q
    ||||||||    
T  36985249 aattttga 36985242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 794 - 856
Target Start/End: Original strand, 3819487 - 3819548
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaa 856  Q
    ||||||||| |||| ||||  ||||| | ||||||||||||||||||||||||||||||||||    
T  3819487 ttggctaaagtgcatttttcccccttaa-gtttcaaaatgttgcaattttggcccctattaaa 3819548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 794 - 859
Target Start/End: Complemental strand, 12723567 - 12723501
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||| ||||| ||||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  12723567 ttggccaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 12723501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 794 - 859
Target Start/End: Original strand, 19924263 - 19924329
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaa 859  Q
    ||||||||||  ||||||| ||||| || |||| |||||||||||||||||||||| ||||||||||    
T  19924263 ttggctaaacctcacttttcgccctctaagttttaaaatgttgcaattttggccccttattaaaaaa 19924329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 634 - 692
Target Start/End: Complemental strand, 39689043 - 39688985
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| |||| || |||| ||||||||| ||||||||||||||||||||| |||||||||    
T  39689043 ggcttaaacccatttttgaccccctaaatttgcaaaagttgcaattttgaccccctatt 39688985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 796 - 916
Target Start/End: Complemental strand, 44147274 - 44147149
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcc-cctttcatccaaaattgc 891  Q
    ||||||| ||||||||| ||||  ||||||||||||| |||| ||||||| ||||||||  |||||||  ||||||||||| |||||   ||||||||||    
T  44147274 ggctaaagtgcacttttcgccccatatgtttcaaaatattgcgattttggccccctattaaaaaaaatgacaattttggcctcctttatcccaaaattgc 44147175  T
Q  892 tgag-agatgccacgtgtcccaaaaa 916  Q
    |||| ||| |||| || |||||||||    
T  44147174 tgagaagacgccatgtatcccaaaaa 44147149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 4519171 - 4519107
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctattaaaaaa 859  Q
    ||||||||| ||||||| | ||| || ||||||||||||||| |||||||| |||||||||||||    
T  4519171 ggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggctccctattaaaaaa 4519107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 4807905 - 4807841
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattt-tggcccctattaaaaaa 859  Q
    ||||||||| ||||||| ||| |||| ||||||||||||||| |||| || ||||||||||||||    
T  4807905 ggctaaacttcacttttcgccttttaagtttcaaaatgttgcgatttatgccccctattaaaaaa 4807841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 854 - 940
Target Start/End: Original strand, 7117175 - 7117266
Alignment:
Q  854 aaaaaatagcaattttggcccctttcatcc-aaaattgctgag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
    |||||||| ||||||||||||||||| ||| |||| ||||||| ||| ||||| ||||||  |||||||||||| || ||||||||||||||    
T  7117175 aaaaaataacaattttggcccctttcgtcctaaaactgctgagaagacgccacatgtcccaaaaaaagggccataattgcaactttttgtaa 7117266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 17648243 - 17648307
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggc-ccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||  |||||||| |||||||||||||    
T  17648243 ggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggctccctattaaaaaa 17648307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 21930105 - 21930041
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| ||||||  ||||||||||||||    
T  21930105 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaa 21930041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 701 - 753
Target Start/End: Original strand, 41773724 - 41773776
Alignment:
Q  701 tggcaaaagtgatcccctatgtttacccccttttgcaaaacgtcaattttgac 753  Q
    ||||||||||||  ||| ||||||||||||||||||||||  |||||||||||    
T  41773724 tggcaaaagtgactccccatgtttacccccttttgcaaaagctcaattttgac 41773776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 44146972 - 44147036
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| |||||  | ||||||||||||||| ||||||| ||||||||||||||    
T  44146972 ggctaaacttcacttttcgccctccaagtttcaaaatgttgcgattttggccccctattaaaaaa 44147036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 750
Target Start/End: Complemental strand, 6572492 - 6572374
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt--nnnnnnnntggcaaaagtgatcccctatgtttaccccct 731  Q
    |||| |||| || |||||||||| || ||||||||||||| ||||||||||| ||||||          |||||||| ||| |||  ||||||| |||||    
T  6572492 ggcttaaacccagtttttaccccttaggtttgcaaaagttacaattttggcctcctattaaaaaaaaaatggcaaaaatgacccctcatgtttagcccct 6572393  T
Q  732 tttgcaaaacgtcaatttt 750  Q
    |||||||||| ||||||||    
T  6572392 tttgcaaaacctcaatttt 6572374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 15869637 - 15869574
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    |||||||||||||||||||| |  || ||||||||||||||  ||||| ||||||||| |||||    
T  15869637 ggctaaactgcacttttggctccctaagtttcaaaatgttgtgattttagcccctattcaaaaa 15869574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 796 - 896
Target Start/End: Original strand, 18881504 - 18881607
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||||||| ||||| | || ||| ||||  ||||||||| ||||||| |||||||| ||||||| |||||||||||||| ||| | ||||||||| |    
T  18881504 ggctaaactgcgcttttcgacccttaagttttgaaatgttgcgattttggccccctattaaaaaaatggcaattttggcccccttcgtcccaaaattgtt 18881603  T
Q  893 gaga 896  Q
    ||||    
T  18881604 gaga 18881607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 793 - 848
Target Start/End: Original strand, 20788031 - 20788086
Alignment:
Q  793 attggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggccc 848  Q
    ||||||| || ||||||||||||||  |||||||||| | ||||||||||||||||    
T  20788031 attggcttaattgcacttttggccccctatgtttcaataagttgcaattttggccc 20788086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 797 - 916
Target Start/End: Original strand, 32400325 - 32400447
Alignment:
Q  797 gctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgctg 893  Q
    |||||||||||||| | ||||| ||||||| |||||||||| ||||||   ||||||| ||||||| |||| ||| | ||||||||| ||||||||||||    
T  32400325 gctaaactgcacttctcgccctctatgttttaaaatgttgcgattttgattccctattaaaaaaatggcaactttag-ccctttcataccaaaattgctg 32400423  T
Q  894 ag-agatgccacgtgtcccaaaaa 916  Q
    || |||  |||||||| |||||||    
T  32400424 agaagacaccacgtgttccaaaaa 32400447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 845
Target Start/End: Original strand, 33895373 - 33895424
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg 845  Q
    ||||||||||| ||||||| ||||| || |||| ||||||||||||||||||    
T  33895373 ttggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttgg 33895424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 692
Target Start/End: Original strand, 41767569 - 41767604
Alignment:
Q  657 ctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||||||||||||||| |||||||||||||||||||    
T  41767569 ctaagtttgcaaaagtagcaattttggccccctatt 41767604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 794 - 859
Target Start/End: Complemental strand, 21666579 - 21666513
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||| |||||||||||| ||||  |  ||||||||||||||| ||||||| ||||||||||||||    
T  21666579 ttggctgaactgcactttttgcccccttagtttcaaaatgttgcgattttggccccctattaaaaaa 21666513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 677
Target Start/End: Complemental strand, 23410107 - 23410074
Alignment:
Q  644 cactttttaccccctaagtttgcaaaagttgcaa 677  Q
    ||||||||||| ||||||||||||||||||||||    
T  23410107 cactttttacctcctaagtttgcaaaagttgcaa 23410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 689
Target Start/End: Original strand, 34602012 - 34602069
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccct 689  Q
    |||||| ||| |||||||| |||||||| ||||  ||||||||| |||||||||||||    
T  34602012 ttggcttaaatgcacttttcaccccctatgtttcaaaaagttgcgattttggccccct 34602069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 692
Target Start/End: Complemental strand, 44066782 - 44066729
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| ||| ||||| ||| ||||||||||||||||| ||||||| |||||||||    
T  44066782 aaacacaccttttatcccttaagtttgcaaaagttgtaattttgaccccctatt 44066729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 89; Significance: 2e-42; HSPs: 3)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 632 - 792
Target Start/End: Original strand, 24804 - 24963
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccct 731  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||        |||||||||||| |||| |||| ||||||||    
T  24804 ttggctaaaacgtactttttgccccctaagtttgcagaagttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccc-atgtctaccccct 24902  T
Q  732 tttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||||||||||||||||| ||| |||||  |||||||||||||| ||||||||||||    
T  24903 tttgcaaaacgtcaattttgactcagccaaccatatgtggcacgccacttgtgtatttatt 24963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 632 - 792
Target Start/End: Original strand, 37321 - 37480
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccct 731  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||        |||||||||||| |||| |||| ||||||||    
T  37321 ttggctaaaacgtactttttgccccctaagtttgcagaagttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccc-atgtctaccccct 37419  T
Q  732 tttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||||||||||||||||| ||| |||||  |||||||||||||| ||||||||||||    
T  37420 tttgcaaaacgtcaattttgactcagccaaccatatgtggcacgccacttgtgtatttatt 37480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 634 - 782
Target Start/End: Complemental strand, 38421 - 38272
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt-nnnnnnnntggcaaaagtgatcccctatgtttaccccctt 732  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||         |||||||||||| || | |||| |||||||||    
T  38421 ggctaaaacgcactttttgccccttaagtttgcagaagttgcaattttggccccctattaaaaaaaaatggcaaaagtgaccctccatgtctaccccctt 38322  T
Q  733 ttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctg 782  Q
    |||||||||||||||||||||  |||||| |  ||||||||||| |||||    
T  38321 ttgcaaaacgtcaattttgacttagtcaaacatatgtggcacgcaacctg 38272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 3e-38; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 632 - 789
Target Start/End: Complemental strand, 24033213 - 24033056
Alignment:
Q  632 ttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccct 731  Q
    |||||| ||||  |||||| |||| |||||||||||||||| |||||||||||||||||||        |||||||||||| |||| || ||||||||||    
T  24033213 ttggcttaaacctacttttcaccctctaagtttgcaaaagtagcaattttggccccctattaaaaaaaatggcaaaagtgaccccccatatttaccccct 24033114  T
Q  732 tttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    |||||||||| |||||||||||||||||||||  |||||||| |||||||||||||||    
T  24033113 tttgcaaaacctcaattttgacccagtcaaccatatgtggcatgccacctgtgtattt 24033056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 634 - 789
Target Start/End: Original strand, 31376529 - 31376684
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||        |||||||||||| |||  |||||||||||||||    
T  31376529 ggcttaaacgcacttttcaccctctaagtttgcaaaagttgcaattttggcccccttttaaaaaaaatggcaaaagtgacccctcatgtttacccccttt 31376628  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    |||||||| ||||||||||| |||||||||  ||||| || |||||||||||||||    
T  31376629 tgcaaaacctcaattttgactcagtcaaccatatgtgtcatgccacctgtgtattt 31376684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 634 - 792
Target Start/End: Complemental strand, 1532631 - 1532472
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnn-tggcaaaagtgatcccctatgtttaccccctt 732  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||||| ||||         |||||||||||| |||| |||| |||||||||    
T  1532631 ggcttaaacccactttttaccccctaagtttgcagaagttgcaattttggccccatattaaaaaaaaatggcaaaagtgaccccccatgtctaccccctt 1532532  T
Q  733 ttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||| ||||||||||||  ||||||||  ||||||||||||||| |||||||||||    
T  1532531 ttgcaaaatgtcaattttgacttagtcaaccgtatgtggcacgccacccgtgtatttatt 1532472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 794 - 940
Target Start/End: Complemental strand, 3617104 - 3616951
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaatttt-ggcccctattaaa-aaatagcaattttggcccctttcatcc-aaaattg 890  Q
    ||||||||||| ||||||| ||||  |||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||| |||| |||||||    
T  3617104 ttggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttcgccccctattaaataaatagcaattttggccccttttatccaaaaattg 3617005  T
Q  891 ctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  3617004 ctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 3616951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 639 - 789
Target Start/End: Complemental strand, 29183508 - 29183359
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaa 738  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||||||||||||         ||||||||||| |||| || | |||||||||||||||    
T  29183508 aaacacactttttaccctctaagtttgaaaaagttgcaattttggccccctattaaaaaaaa-ggcaaaagtgaccccccatatatacccccttttgcaa 29183410  T
Q  739 aacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    ||||||||||||||| |||||||||  || ||||||| |||||||||||||    
T  29183409 aacgtcaattttgactcagtcaaccatatatggcacgtcacctgtgtattt 29183359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 794 - 940
Target Start/End: Complemental strand, 24962259 - 24962105
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcatc-caaaatt 889  Q
    |||||||||||| |||||| ||||  ||||||||||||||||||| |||||| ||||||||  |||||||||||||||||| ||||||||||  ||||||    
T  24962259 ttggctaaactgtacttttcgccccctatgtttcaaaatgttgcagttttggccccctattaaaaaaaatagcaattttggtccctttcatcaaaaaatt 24962160  T
Q  890 gctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  24962159 gctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 24962105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 634 - 786
Target Start/End: Complemental strand, 16277022 - 16276872
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||  | |||| |||||| ||||||||    
T  16277022 ggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt-aaaaaaatggcaaaagcta-cccccatgttttcccccttt 16276925  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgta 786  Q
    ||||||||||| ||||||||| ||||||||  |||||||| ||||| ||||||    
T  16276924 tgcaaaacgtcgattttgaccgagtcaaccatatgtggcatgccacatgtgta 16276872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 4059522 - 4059674
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||| ||||||||| ||||  |||||||||||||||||| ||||||| ||||||||  ||||||| |||||||||||||||||||| ||||||||||    
T  4059522 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaattgcaattttggcccctttcatcccaaaattgc 4059621  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  || |||| |||||||||||||||||    
T  4059622 tgagaagacgccacgtgtcccaaaaaatggaccataatcgcaactttttgtaa 4059674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 797 - 940
Target Start/End: Original strand, 43706655 - 43706806
Alignment:
Q  797 gctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    |||||||||||||||| ||||  ||||||||| |||||||| ||||||| ||||||||  |||||||||||||||||||||||||||| |||||||||||    
T  43706655 gctaaactgcacttttcgccccctatgtttcataatgttgcgattttggccccctattaaaaaaaatagcaattttggcccctttcatcccaaaattgct 43706754  T
Q  893 gag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
     || ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  43706755 cagaagatgccacgtgtcccggaaaaggggtcataatcgcaactttttgtaa 43706806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 2425527 - 2425376
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||||||||||||| ||||  ||||||||| |||||||| ||||||| |||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  2425527 ggctaaactgcactttttgccccctatgtttcataatgttgcgattttggccccctattaaaaaaatagcaattttggcccatttcatcccaaaattgct 2425428  T
Q  893 gag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
     || ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  2425427 cagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaa 2425376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 51719123 - 51719274
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttca-tccaaaattgct 892  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||||| ||||||||||||    
T  51719123 ggctaaactgcacttttcgccctctatgtttcataatgttgcaattttggccccctattaaaaaaatagcaattttggtccctttcattccaaaattgct 51719222  T
Q  893 gag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
     || ||||||||||| || |  |||| ||| ||| |||||||||||||||||    
T  51719223 cagaagatgccacgtatctcagaaaaggggtcataatcgcaactttttgtaa 51719274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 24196565 - 24196413
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcatcc-aaaattgc 891  Q
    ||||||||||||||||| |||   ||||||| |||||||||| ||||||| ||||||||  ||||||| |||||||||||||||||| ||| ||||||||    
T  24196565 ggctaaactgcacttttcgcctcctatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccctttcgtccaaaaattgc 24196466  T
Q  892 tgag-agatgccacgtgtcccaaaaa--gggccata-tcgcaactttttgtaa 940  Q
    |||| ||| |||||||||||||||||  |||||||| ||||||||||||||||    
T  24196465 tgagaagacgccacgtgtcccaaaaaaggggccatattcgcaactttttgtaa 24196413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 27092853 - 27093004
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||||||||||| | ||||  |||||||||||||||| | |||||||||||||||  ||||||| ||||||||||||| |||||| |||||||||||    
T  27092853 ggctaaactgcacttctcgccccctatgtttcaaaatgttacgattttggcccctattaaaaaaaatggcaattttggcccatttcatcccaaaattgct 27092952  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| ||||||||| |||||||  ||||||| || ||||||||||||||    
T  27092953 gagaagacgccacgtgttccaaaaaaggggccataattgcaactttttgtaa 27093004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 797 - 937
Target Start/End: Original strand, 16551645 - 16551792
Alignment:
Q  797 gctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgctg 893  Q
    ||||| |||||||||| ||||| || ||||||||||||||||||||||| |||||||| ||||||| | ||||||||| |||||| | ||||||||||||    
T  16551645 gctaatctgcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaaatggtaattttggcacctttcgtcccaaaattgctg 16551744  T
Q  894 ag-agatgccacgtgtcccaaa--aagggccat-atcgcaactttttg 937  Q
    || ||| |||||||||||||||  ||||||||| ||||||||||||||    
T  16551745 agaagacgccacgtgtcccaaaacaagggccataatcgcaactttttg 16551792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 46432216 - 46432368
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||| ||||||||| ||||  ||||||||| |||||||| ||||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  46432216 ggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctattaaaaaaaatagcaattttggcccctttcatcccaaaattgc 46432315  T
Q  892 t-gagagatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
    | |  ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  46432316 tcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaa 46432368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 797 - 940
Target Start/End: Original strand, 48471864 - 48472015
Alignment:
Q  797 gctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    |||||| ||||||||| | ||  |||||||||||||||||| ||||||| ||||||||  ||||||| |||||||||||||| ||||| |||||||||||    
T  48471864 gctaaagtgcacttttcgtcccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgct 48471963  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||||||||||||||||  || |||| |||||||||||||||||    
T  48471964 gagaagacgccacgtgtcccaaaaaagggaccataatcgcaactttttgtaa 48472015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 634 - 789
Target Start/End: Original strand, 16273730 - 16273890
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccct-----atgtttaccc 728  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||||| |||||||||        |||||||||  | ||||      |||||| |||    
T  16273730 ggcttaaactcactttttaccccataagtttgcaaaagttgcaattttgaccccctattaaaaaaaatggcaaaagctacccccccccccatgttttccc 16273829  T
Q  729 ccttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    |||||||||||||||| ||||||||| ||||||||  |||||||| |||||||| ||||||    
T  16273830 ccttttgcaaaacgtcgattttgaccgagtcaaccatatgtggcatgccacctgggtattt 16273890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 634 - 761
Target Start/End: Original strand, 5971086 - 5971213
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||         ||||||||||| |||   |||||| ||||||     
T  5971086 ggctaaaatgcactttttgccccctaagtttgcaaaagttgcaattttagccccctattaaaaaaaaaggcaaaagtgacccctcctgtttagccccttc 5971185  T
Q  734 tgcaaaacgtcaattttgacccagtcaa 761  Q
    |||||||| |||||||||||| ||||||    
T  5971186 tgcaaaacctcaattttgacctagtcaa 5971213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 794 - 940
Target Start/End: Original strand, 19077924 - 19078077
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa-tagcaattttggcccctttcatcc-aaaattg 890  Q
    ||||||||||| ||||||| | ||  ||||||| ||||||||  |||||| | |||||||||||||| | |||||||||||||||||||||| |||||||    
T  19077924 ttggctaaactacacttttcgtcccctatgttttaaaatgttataatttttgtcccctattaaaaaaatggcaattttggcccctttcatccaaaaattg 19078023  T
Q  891 ctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||||| ||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  19078024 ctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaa 19078077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 794 - 940
Target Start/End: Original strand, 19125814 - 19125967
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa-tagcaattttggcccctttcatcc-aaaattg 890  Q
    ||||||||||| ||||||| | ||  ||||||| ||||||||  |||||| | |||||||||||||| | |||||||||||||||||||||| |||||||    
T  19125814 ttggctaaactacacttttcgtcccctatgttttaaaatgttataatttttgtcccctattaaaaaaatggcaattttggcccctttcatccaaaaattg 19125913  T
Q  891 ctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||||| ||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  19125914 ctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaa 19125967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 634 - 763
Target Start/End: Original strand, 24037903 - 24038030
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||||||||| |||||| ||        ||||||||||||  ||| |||||||||| ||||    
T  24037903 ggcttaaactcactttttatcccttaagtttgcaaaagttgcaattttgacccccttttaaaaaaaatggcaaaagtga--ccccatgtttaccctcttt 24038000  T
Q  734 tgcaaaacgtcaattttgacccagtcaacc 763  Q
    |||||||| ||||||||||||| |||||||    
T  24038001 tgcaaaacatcaattttgacccggtcaacc 24038030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 644 - 789
Target Start/End: Complemental strand, 22778685 - 22778541
Alignment:
Q  644 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgt 743  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||         ||||||  ||| |||| ||||||| |||| ||||||||||      
T  22778685 cactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaaaggcaaacatga-cccccatgtttagccccatttgcaaaacac 22778587  T
Q  744 caattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    ||||||||||   ||||| || ||||| ||||||| ||||||||||    
T  22778586 caattttgacttggtcaatcctatgtgtcacgccagctgtgtattt 22778541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 639 - 753
Target Start/End: Original strand, 43914912 - 43915024
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaa 738  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||||||||||||        |||||||||||| |||| |||| || ||||||||||||    
T  43914912 aaacgcacttttcgccccctaagtttgcaaaggttgcaattttggccccctatt-aaaaaaatggcaaaagtgaccccccatgtcta-ccccttttgcaa 43915009  T
Q  739 aacgtcaattttgac 753  Q
    |||||||||||||||    
T  43915010 aacgtcaattttgac 43915024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 634 - 789
Target Start/End: Original strand, 1531635 - 1531790
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||| |||||||||||||||||||||||||||| |||||||||        |  ||||||| | |||| ||||||| |||||||    
T  1531635 ggcttaaactcactttttactccctaagtttgcaaaagttgcaattttgaccccctattaaaaaaaattacaaaagttaccccccatgtttagccccttt 1531734  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    ||||||||  |||||||||||  ||||| || ||||| |||| ||  |||||||||    
T  1531735 tgcaaaacaccaattttgacctggtcaatcctatgtgtcacgtcagttgtgtattt 1531790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 643 - 762
Target Start/End: Complemental strand, 5972310 - 5972192
Alignment:
Q  643 gcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacg 742  Q
    |||||||||||||  ||||||| |||| ||||||||||||||||||||||        |||||||||||| ||| |||||||| |||||||||||||||     
T  5972310 gcactttttaccct-taagtttacaaaggttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttatccccttttgcaaaacc 5972212  T
Q  743 tcaattttgacccagtcaac 762  Q
    ||||||||||| | ||||||    
T  5972211 tcaattttgactcggtcaac 5972192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 705 - 792
Target Start/End: Original strand, 22776572 - 22776659
Alignment:
Q  705 aaaagtgatcccctatgtttacccccttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||| |||  |||| |||||||||||||||||| ||||| ||||| |||||||||  |||||||||||||||||||||||||||    
T  22776572 aaaagtgacccctcatgtctacccccttttgcaaaacatcaatcttgactcagtcaaccgtatgtggcacgccacctgtgtatttatt 22776659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 639 - 786
Target Start/End: Complemental strand, 30107114 - 30106970
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaa 738  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||| ||||| ||        |||||||||||| |||  |||| || |||||||| |||    
T  30107114 aaacgcacttttcgccccctaagtttgcaaatgttgcaattttggtcccctgttaaaaaaa-tggcaaaagtgacccc--atgtctatccccttttacaa 30107018  T
Q  739 aacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgta 786  Q
    ||||||||||||||| || ||||||  |||||||| ||||||||||||    
T  30107017 aacgtcaattttgactcaatcaaccgtatgtggcatgccacctgtgta 30106970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 653 - 753
Target Start/End: Original strand, 30105453 - 30105553
Alignment:
Q  653 ccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtcaattttga 752  Q
    ||||||||||||||||| ||||||||||| ||||||||||         | ||||||||| |||| |||| |||||||||||||||||||||||||||||    
T  30105453 ccccctaagtttgcaaaggttgcaatttttgccccctattaaaaataaagacaaaagtgaccccccatgtctacccccttttgcaaaacgtcaattttga 30105552  T
Q  753 c 753  Q
    |    
T  30105553 c 30105553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 19078227 - 19078163
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  19078227 ggctaagctgcactttttgccctctatgtttcaaaatgttgcaattttggccccctattaaaaaa 19078163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 19126117 - 19126053
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  19126117 ggctaagctgcactttttgccctctatgtttcaaaatgttgcaattttggccccctattaaaaaa 19126053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 631 - 786
Target Start/End: Complemental strand, 43916314 - 43916165
Alignment:
Q  631 tttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccc 730  Q
    ||||||| ||||||| ||||  ||||||||||||||||| ||||||||||||| ||| ||||        |||||||||||| ||   |||| || ||||    
T  43916314 tttggcttaaacgcatttttcgccccctaagtttgcaaatgttgcaattttggtccc-tattaaaaaa--tggcaaaagtgaccc---atgtctatcccc 43916221  T
Q  731 ttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgta 786  Q
    ||||||||||||||||||||||| ||||||| |  |||||||| ||||||| ||||    
T  43916220 ttttgcaaaacgtcaattttgactcagtcaatcatatgtggcatgccacctctgta 43916165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 645 - 789
Target Start/End: Original strand, 52142880 - 52143023
Alignment:
Q  645 actttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaaaacgtc 744  Q
    ||||||||||||||||||||| |||||||  ||||||| ||| || ||        || ||||||||| || |||||||||||| ||||||||||||  |    
T  52142880 actttttaccccctaagtttgtaaaagttataattttgaccctct-tttaaaaaaatgacaaaagtgaccctctatgtttacccgcttttgcaaaacccc 52142978  T
Q  745 aattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    |||||||||||||||||||  |  ||||| ||||||| |||||||    
T  52142979 aattttgacccagtcaaccatacttggcatgccacctatgtattt 52143023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 794 - 916
Target Start/End: Original strand, 2657511 - 2657637
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaata--gcaattttggcccctttcat-ccaaaatt 889  Q
    |||||| |||| ||||||| |||||||| |||| |||||||||| ||||| ||||| |||||||||| |  |||||||||||||||||  | ||||||||    
T  2657511 ttggcttaacttcacttttcgccctttaagttttaaaatgttgcgattttagccccctattaaaaaaaattgcaattttggccccttttgtcccaaaatt 2657610  T
Q  890 gctgagagatgccacgtgtcccaaaaa 916  Q
    | ||||| | ||||||||||| |||||    
T  2657611 gttgagaaacgccacgtgtcctaaaaa 2657637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 28919015 - 28919079
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggccc-ctattaaaaaa 859  Q
    |||||||||| |||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  28919015 ggctaaactgtactttttgccctctatgtttcaaaatgttgtaattttggccctctattaaaaaa 28919079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 628 - 754
Target Start/End: Complemental strand, 31377736 - 31377612
Alignment:
Q  628 atatttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacc 727  Q
    |||||||||| ||||  |||||| || | |||||||||||||||||| |||||||||||||| ||        ||| |||||||   |||||||||||||    
T  31377736 atatttggcttaaacctacttttcactctctaagtttgcaaaagttgtaattttggcccccttttaaaaaaaatggtaaaagtg--gccctatgtttacc 31377639  T
Q  728 cccttttgcaaaacgtcaattttgacc 754  Q
    || |||||||||||  |||||||||||    
T  31377638 ccattttgcaaaacaccaattttgacc 31377612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 798 - 879
Target Start/End: Complemental strand, 10685063 - 10684981
Alignment:
Q  798 ctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaa-aaaatagcaattttggcccctttc 879  Q
    |||||||||| |||| ||||  || |||||||||| ||| |||||||||||||||||| |||||  |||||||||||||||||    
T  10685063 ctaaactgcatttttcgccccctaagtttcaaaatattgtaattttggcccctattaaaaaaatgtcaattttggcccctttc 10684981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 796 - 877
Target Start/End: Complemental strand, 19563326 - 19563245
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaa-aaaatagcaattttggcccctt 877  Q
    |||| |||||||||||| |||||| | |||| ||||||||||||||||| |||||||||| |||||| || ||||||||||||    
T  19563326 ggctgaactgcactttttgcccttaa-gttttaaaatgttgcaattttgacccctattaaaaaaataacatttttggcccctt 19563245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 796 - 850
Target Start/End: Complemental strand, 24750073 - 24750019
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccct 850  Q
    ||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||    
T  24750073 ggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggcccct 24750019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 3616799 - 3616863
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  3616799 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaa 3616863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 823 - 859
Target Start/End: Complemental strand, 9387972 - 9387936
Alignment:
Q  823 gtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    |||||||||||||||||||||||||||||||||||||    
T  9387972 gtttcaaaatgttgcaattttggcccctattaaaaaa 9387936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 798 - 915
Target Start/End: Original strand, 18606687 - 18606807
Alignment:
Q  798 ctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctatt-aaaaaatagcaattttggcccctttcatccaaaattgctgag 895  Q
    ||||||||||||||| ||||||||  ||| |||||||||  |||| |  |||||||| |||||||  ||||||||||||||||| |||  ||||||||||    
T  18606687 ctaaactgcacttttcgccctttaaattttaaaatgttgtgatttcgatcccctattaaaaaaatgacaattttggcccctttcgtcccgaattgctgag 18606786  T
Q  896 -agatgccacgtgtcccaaaa 915  Q
     ||| || |||||||||||||    
T  18606787 cagacgctacgtgtcccaaaa 18606807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 794 - 934
Target Start/End: Original strand, 29181999 - 29182146
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-ccccta-ttaaaaaatagcaattttggcccctttcatc-caaaattg 890  Q
    ||||||||| || ||||||  ||||||| ||||||||| |||| |||||||| |||||| |||||||||  | ||||||||| ||||| || ||||||||    
T  29181999 ttggctaaagtgtacttttcaccctttaagtttcaaaaagttgtaattttggccccctatttaaaaaattactattttggcctctttcgtctcaaaattg 29182098  T
Q  891 ctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaacttt 934  Q
    ||||| ||| || ||||||| ||||||  ||||||| |||||||||||    
T  29182099 ctgagaagacgcaacgtgtctcaaaaaatgggccataatcgcaacttt 29182146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 791 - 858
Target Start/End: Original strand, 29676074 - 29676142
Alignment:
Q  791 ttattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaa 858  Q
    |||| ||||||||| ||||||| ||||| || |||||||||||||||||||| |||||| |||||||||    
T  29676074 ttataggctaaacttcacttttcgccctctaagtttcaaaatgttgcaatttaggccccatattaaaaa 29676142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 806 - 936
Target Start/End: Complemental strand, 29676373 - 29676235
Alignment:
Q  806 cacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaa--tagcaattttggcccctttcatc-caaaattgctgag-agatg 900  Q
    ||||||| | ||| ||||||| ||||||||| |||||||| | | ||||||||||  || ||||||||||||||||||||  ||||||| |||| ||  |    
T  29676373 cacttttcgtcctctatgttttaaaatgttgtaattttggtctcatattaaaaaaaataacaattttggcccctttcatcaaaaaattgttgagaaggcg 29676274  T
Q  901 ccacgtgtcccaaaaa--gggccat-atcgcaacttttt 936  Q
    ||||||||||||||||  ||||||| |||||||||||||    
T  29676273 ccacgtgtcccaaaaaaggggccataatcgcaacttttt 29676235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 634 - 692
Target Start/End: Original strand, 24032033 - 24032091
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||| |||| ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  24032033 ggcttaaacccacttttcaccctctaagtttgcaaaagtagcaattttggccacctatt 24032091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 854 - 940
Target Start/End: Original strand, 28920717 - 28920809
Alignment:
Q  854 aaaaaatagcaattttggcccctttcatcc-aaaattgctgag-agatgccacgtgtcccaaaaa---gggccat-atcgcaactttttgtaa 940  Q
    ||||||||| ||||||| |||||||||||| |||||||||||| ||| ||||| |||||||||||   ||||||| ||||| |||||||||||    
T  28920717 aaaaaatagtaattttgacccctttcatccaaaaattgctgagaagacgccacatgtcccaaaaaagggggccataatcgccactttttgtaa 28920809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 794 - 859
Target Start/End: Complemental strand, 46432522 - 46432456
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| | ||||||| |||| ||| ||||||||||||||| ||||||| ||||||||||||||    
T  46432522 ttggctaaagtccacttttcgccccttaagtttcaaaatgttgcgattttggccccctattaaaaaa 46432456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 4059826 - 4059762
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaatttt-ggcccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||| ||||| | ||||||||||||||    
T  4059826 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttagccccctattaaaaaa 4059762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 24196261 - 24196325
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggccc-ctattaaaaaa 859  Q
    ||||||||| ||||||| ||||  || ||||||||||||||| |||||||||| |||||||||||    
T  24196261 ggctaaactccacttttcgccccctaagtttcaaaatgttgcgattttggccctctattaaaaaa 24196325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 862 - 940
Target Start/End: Complemental strand, 24750033 - 24749950
Alignment:
Q  862 gcaattttggcccctttcatc-caaaattgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||||||||||||||||||||  ||||||||| || ||| ||||||||| |||||||  ||||||| |||||||||||||||||    
T  24750033 gcaattttggcccctttcatctaaaaattgctaagaagacgccacgtgttccaaaaaatgggccataatcgcaactttttgtaa 24749950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 24961953 - 24962017
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||| || ||||||||||||||  ||||||| ||||||||||||||    
T  24961953 ggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggccccctattaaaaaa 24962017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 28920955 - 28920891
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||  || ||||||||||||||| ||||||| ||||||||||||||    
T  28920955 ggctaaacttcacttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaa 28920891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 2657815 - 2657752
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    ||||||||| ||||||| ||||  || |||||||||| |||| |||||| ||||||||||||||    
T  2657815 ggctaaactacacttttcgccccctaagtttcaaaatattgcgattttgacccctattaaaaaa 2657752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 9387695 - 9387758
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaaaaaa 859  Q
    ||||||||||||||||| ||| | || |||||||||| || | ||||| |||||||||||||||    
T  9387695 ggctaaactgcactttttgccttctaagtttcaaaatattacgattttcgcccctattaaaaaa 9387758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 796 - 892
Target Start/End: Complemental strand, 16972154 - 16972055
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaatttt-ggcccctatt-aaaaaatagcaattttggcccctttc-atccaaaattgct 892  Q
    ||||||||||||||||| ||||  || |||| |||||||||| ||||| | |||||||| |||||||  |||||||||||| ||||  ||||||||||||    
T  16972154 ggctaaactgcacttttcgccccctaagttttaaaatgttgcgattttagccccctattaaaaaaatgacaattttggcccatttcgttccaaaattgct 16972055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 786 - 856
Target Start/End: Original strand, 28552295 - 28552366
Alignment:
Q  786 atttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaa 856  Q
    |||| |||||| ||||| ||||||||| ||||  || ||||||||||||||| ||||||| |||||||||||    
T  28552295 attttttattgactaaagtgcacttttcgccccctaagtttcaaaatgttgcgattttggtcccctattaaa 28552366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 797 - 859
Target Start/End: Original strand, 50334719 - 50334782
Alignment:
Q  797 gctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||||| ||||||| ||||  || |||| |||||||||||||||||| ||||||||||||||    
T  50334719 gctaaactccacttttcgccccctaagttttaaaatgttgcaattttggccccctattaaaaaa 50334782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 794 - 859
Target Start/End: Original strand, 10684792 - 10684858
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaatttt-ggcccctattaaaaaa 859  Q
    |||||||||||| | |||| |||| ||| |||| |||||||||||||||| | ||||||||||||||    
T  10684792 ttggctaaactgtatttttcgccccttaagttttaaaatgttgcaattttagtcccctattaaaaaa 10684858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 43602126 - 43602072
Alignment:
Q  627 tatatttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaatttt 681  Q
    ||||||||||| |||| ||||||| || | ||||||||||||||||| |||||||    
T  43602126 tatatttggcttaaacacacttttcacactctaagtttgcaaaagttacaatttt 43602072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 73; Significance: 7e-33; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 2048 - 2201
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt---aaaaaatagcaattttggcccctttcatcc-aaaattg 890  Q
    ||||||||||||||||| ||||  ||||||| |||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||| |||||||    
T  2048 ggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggccccctattaaaaaaaaatagcaattttggcccctttcatccaaaaattg 2147  T
Q  891 ctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||||| ||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  2148 ctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaa 2201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 73; Significance: 7e-33; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 2294 - 2143
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggccc-ctattaaaaaa-tagcaattttggcccctttcatcc-aaaattgct 892  Q
    ||||||||||||||||| ||||   |||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||    
T  2294 ggctaaactgcacttttcgccccccatgttttaaaatgttgcaattttggccctctattaaaaaaatagcaattttggcccctttcatccaaaaattgct 2195  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||||||||||||||||  |||| || |||||||||||||||||    
T  2194 gagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaa 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 73; Significance: 7e-33; HSPs: 3)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 625 - 761
Target Start/End: Original strand, 9553 - 9689
Alignment:
Q  625 tttatatttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgttt 724  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||| |||  ||||||    
T  9553 tttattttaggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgaaccctcatgttt 9652  T
Q  725 acccccttttgcaaaacgtcaattttgacccagtcaa 761  Q
    | |||||| |||||||| |||||||||||| ||||||    
T  9653 agccccttctgcaaaacctcaattttgacctagtcaa 9689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 625 - 761
Target Start/End: Original strand, 14927 - 15063
Alignment:
Q  625 tttatatttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgttt 724  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||| |||  ||||||    
T  14927 tttattttaggctaaaacgcactttttgccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaatggcaaaagtgaaccctcatgttt 15026  T
Q  725 acccccttttgcaaaacgtcaattttgacccagtcaa 761  Q
    | |||||| |||||||| |||||||||||| ||||||    
T  15027 agccccttctgcaaaacctcaattttgacctagtcaa 15063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 634 - 762
Target Start/End: Complemental strand, 16163 - 16035
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||||||||||||||||| ||||||| |||| |||||||||||||||||| |||        ||||||||||||  || |||||||| |||||||    
T  16163 ggcttaaacgcactttttaccccttaagtttacaaaggttgcaattttggcccccaattaaaaaaaatggcaaaagtgacaccttatgtttatccccttt 16064  T
Q  734 tgcaaaacgtcaattttgacccagtcaac 762  Q
    |||||||| ||||||||||| | ||||||    
T  16063 tgcaaaacctcaattttgactcggtcaac 16035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 70; Significance: 5e-31; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 66477 - 66326
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccctattaa--aaaatagcaattttggcccctttcatcc-aaaattgct 892  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||| ||    
T  66477 ggctaaactgcacttttcgccccctatgtttcaaaatgttgtaattttggcccctattaaaaaaaatagcaattttggcccctttcatccaaaaatttct 66378  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| ||||||||| | |||||  ||| ||| |||||||||||||||||    
T  66377 gagaagacgccacgtgttcaaaaaaaggggtcataatcgcaactttttgtaa 66326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 859
Target Start/End: Original strand, 66174 - 66248
Alignment:
Q  788 ttattatt-ggctaaactgcacttttggccctttatgtttcaaaatgttgcaatttt--ggcccctattaaaaaa 859  Q
    |||||||| ||||||||| ||||||| ||||| || |||| ||||||||||||||||  | ||||||||||||||    
T  66174 ttattattaggctaaacttcacttttcgccctctaagttttaaaatgttgcaatttttggccccctattaaaaaa 66248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1212 (Bit Score: 68; Significance: 7e-30; HSPs: 2)
Name: scaffold1212
Description:

Target: scaffold1212; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 709 - 792
Target Start/End: Original strand, 2183 - 2266
Alignment:
Q  709 gtgatcccctatgtttacccccttttgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtatttatt 792  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  2183 gtgatcccctatgtctacccccttttgcaaaacgtcaattttgactcagtgaaccctatgtggcacgccacctgtgtatttatt 2266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1212; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 634 - 682
Target Start/End: Original strand, 2135 - 2183
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttg 682  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2135 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttg 2183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0446 (Bit Score: 68; Significance: 7e-30; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 634 - 789
Target Start/End: Original strand, 11561 - 11716
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||        |||||||||  | |||| |||||| ||||||||    
T  11561 ggcttaaactcactttttaccccctaagtttgcaaaagttgcaattttagccccctattaaaaaaaatggcaaaagctaccccccatgttttcccccttt 11660  T
Q  734 tgcaaaacgtcaattttgacccagtcaaccccatgtggcacgccacctgtgtattt 789  Q
    | ||||||||| ||||||||| ||||| ||  |||||||| |||||||| ||||||    
T  11661 ttcaaaacgtcgattttgaccgagtcagccatatgtggcatgccacctgggtattt 11716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0827 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 633 - 753
Target Start/End: Complemental strand, 3346 - 3226
Alignment:
Q  633 tggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttaccccctt 732  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||        ||||||||||||  ||| ||||||| ||||||    
T  3346 tggctaaaacgcactttttacacgctaagtttgcaaaagttgcaattttgaccccctattaaagaaaatggcaaaagtgacaccccatgtttatcccctt 3247  T
Q  733 ttgcaaaacgtcaattttgac 753  Q
    |||||||| ||||||||||||    
T  3246 ttgcaaaatgtcaattttgac 3226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 796 - 940
Target Start/End: Original strand, 5650 - 5801
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctatt--aaaaaatagcaattttggcccctttcat-ccaaaattgc 891  Q
    ||||||||||||||||| ||||  |||||||||||||||| ||||||||||| ||||||  ||||||| |||||||||| |||||| || ||||||||||    
T  5650 ggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcctcctattaaaaaaaatggcaattttggtcccttttatcccaaaattgc 5749  T
Q  892 tgag-agatgccacgtgtccc-aaaaagggccat-atcgcaactttttgtaa 940  Q
    || | ||| |||||||||||| |||||||||||| |||||||||||||||||    
T  5750 tgcgaagacgccacgtgtcccaaaaaagggccataatcgcaactttttgtaa 5801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 49962 - 49811
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| ||||||||| ||||  ||||||||| |||||||| ||||||  |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  49962 ggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatttaaaaaatagcaattttggcccctttcatcccaaaattgct 49863  T
Q  893 gag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
     || ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  49862 cagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaa 49811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 62501 - 62350
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| ||||||||| ||||  ||||||||| |||||||| ||||||  |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  62501 ggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatttaaaaaatagcaattttggcccctttcatcccaaaattgct 62402  T
Q  893 gag-agatgccacgtgtccc--aaaaagggccat-atcgcaactttttgtaa 940  Q
     || ||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  62401 cagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaa 62350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 61; Significance: 1e-25; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 796 - 940
Target Start/End: Complemental strand, 19585 - 19434
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaa-tagcaattttggcccctttcatcc-aaaattgct 892  Q
    |||||||||||| |||| |||| ||| |||||||| |||| | ||||||||||| |||||||||| | ||||||||||||| |||||||| |||||||||    
T  19585 ggctaaactgcatttttcgccccttaagtttcaaactgtttcgattttggccccctattaaaaaaatggcaattttggcccatttcatccaaaaattgct 19486  T
Q  893 gag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||| ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  19485 gagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaa 19434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 796 - 916
Target Start/End: Complemental strand, 62122 - 61995
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tatt----aaaaaatagcaattttggcccctttcatcc-aaaatt 889  Q
    |||||||||||| ||||  |||  |||||||||||||||||||||||||||||| ||||    |||||||||||||||||||||||||||||| ||||||    
T  62122 ggctaaactgcatttttcaccccctatgtttcaaaatgttgcaattttggccccgtattaaaaaaaaaatagcaattttggcccctttcatccaaaaatt 62023  T
Q  890 gctgag-agatgccacgtgtcccaaaaa 916  Q
    | |||| ||| |||||||||||||||||    
T  62022 gttgagaagacgccacgtgtcccaaaaa 61995  T

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Target: scaffold0025; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 61814 - 61878
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||||| ||| | || ||||||||||||||| ||||||| ||||||||||||||    
T  61814 ggctaaacttcacttttcgccttctaagtttcaaaatgttgcgattttggccccctattaaaaaa 61878  T

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Target: scaffold0419 (Bit Score: 59; Significance: 2e-24; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 794 - 916
Target Start/End: Original strand, 2959 - 3085
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt-aaaaaatagcaattttggcccctttcat-ccaaaattg 890  Q
    ||||||||| ||||||||| ||||  |||||||||||||||||| ||||||| |||||||| ||||||| |||||||||||||| ||||| |||||||||    
T  2959 ttggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaatggcaattttggcccccttcatcccaaaattg 3058  T
Q  891 ctgag-agatgccacgtgtcccaaaaa 916  Q
     |||| ||| |||||||||||||||||    
T  3059 atgagaagacgccacgtgtcccaaaaa 3085  T

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Target: scaffold0419; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 794 - 859
Target Start/End: Complemental strand, 3266 - 3200
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttg-gcccctattaaaaaa 859  Q
    ||||||||||  ||||||| ||||| || ||||||||||||||||||||||  ||||||||||||||    
T  3266 ttggctaaacctcacttttcgccctctaagtttcaaaatgttgcaattttgaccccctattaaaaaa 3200  T

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Target: scaffold0001 (Bit Score: 57; Significance: 3e-23; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 794 - 940
Target Start/End: Original strand, 141943 - 142099
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcc-cctatt----aaaaaatagcaattttggcccctttcatc-caaaa 887  Q
    ||||||||||||||||||| | ||  ||||||| | |||||||||||||||||| | ||||    |||||||||||||||||||||||||||||  ||||    
T  141943 ttggctaaactgcacttttcgtcccctatgttttataatgttgcaattttggcctcttattaaaaaaaaaatagcaattttggcccctttcatctaaaaa 142042  T
Q  888 ttgctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    ||||| || ||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  142043 ttgcttagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaa 142099  T

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Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 799 - 859
Target Start/End: Complemental strand, 142247 - 142186
Alignment:
Q  799 taaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    |||||| ||||||| ||||| || |||| |||||||||||||||||| ||||||||||||||    
T  142247 taaacttcacttttcgccctctaagttttaaaatgttgcaattttggtcccctattaaaaaa 142186  T

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Target: scaffold0150 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 796 - 916
Target Start/End: Complemental strand, 6134 - 6010
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaa-tagcaattttggcccctttcat-ccaaaattgct 892  Q
    ||||||| || |||||| ||||  |||||||  ||||||||| ||||||||||| |||||||||| | |||||||||||||| ||||| |||||||||||    
T  6134 ggctaaagtgtacttttcgccccctatgtttttaaatgttgcgattttggccccctattaaaaaaatggcaattttggcccccttcatcccaaaattgct 6035  T
Q  893 gag-agatgccacgtgtcccaaaaa 916  Q
    ||| |||||||||||||||||||||    
T  6034 gagaagatgccacgtgtcccaaaaa 6010  T

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Target: scaffold0683 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 820 - 916
Target Start/End: Original strand, 5144 - 5246
Alignment:
Q  820 tatgtttcaaaatgttgcaattttgg-cccctattaaaaaata---gcaattttggcccctttcatcc-aaaattgctgag-agatgccacgtgtcccaa 913  Q
    |||||||||||||||||||||||||| |||||||||||||| |   |||||||||||||||||||||| |||||||||||| ||| | || |||||||||    
T  5144 tatgtttcaaaatgttgcaattttggtcccctattaaaaaaaaatggcaattttggcccctttcatccaaaaattgctgagaagacgtcatgtgtcccaa 5243  T
Q  914 aaa 916  Q
    |||    
T  5244 aaa 5246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 5290 - 5354
Alignment:
Q  796 ggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctattaaaaaa 859  Q
    ||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  5290 ggctaaactacacttctcgccctttatgtttcaaaatgttgcaattttggccccctattaaaaaa 5354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 820 - 916
Target Start/End: Original strand, 24988 - 25089
Alignment:
Q  820 tatgtttcaaaatgttgcaattttgg-cccctattaaaaaata--gcaattttggcccctttcat-ccaaaattgctgag-agatgccacgtgtcccaaa 914  Q
    ||||||| ||||| |||| ||||||| |||||||||||||| |  |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  24988 tatgttttaaaatattgcgattttggtcccctattaaaaaaaatggcaattttggcccctttcataccaaaattgctgagaagacgccacgtgtcccaaa 25087  T
Q  915 aa 916  Q
    ||    
T  25088 aa 25089  T

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Target: scaffold0007 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 794 - 940
Target Start/End: Original strand, 250516 - 250670
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccc-tattaaaaaata--gcaattttggcccctttcatc-caaaatt 889  Q
    ||||||||| ||||||||| ||||  ||||||| |||||||||| | |||| |||| |||||||||| |  |||||||||||||| ||||||  ||||||    
T  250516 ttggctaaagtgcacttttcgccccctatgttttaaaatgttgcgactttgaccccctattaaaaaaaatggcaattttggcccccttcatctgaaaatt 250615  T
Q  890 gctgag-agatgccacgtgtcccaaaaa--gggccat-atcgcaactttttgtaa 940  Q
    |||||| ||| |||||||| ||||||||  ||||||| ||| |||||||||||||    
T  250616 gctgagaagacgccacgtgccccaaaaaaggggccataatcacaactttttgtaa 250670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 634 - 753
Target Start/End: Complemental strand, 81065 - 80948
Alignment:
Q  634 ggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttt 733  Q
    |||| ||||||||| || ||||||||||||||||||||| || |||||| |||||| ||        |||||||| |||  ||| |||||||||||||||    
T  81065 ggcttaaacgcactattcaccccctaagtttgcaaaagtagcgattttgaccccctttttaaaaaaatggcaaaattga--ccccatgtttacccccttt 80968  T
Q  734 tgcaaaacgtcaattttgac 753  Q
    ||||||||  ||||||||||    
T  80967 tgcaaaacaccaattttgac 80948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 639 - 770
Target Start/End: Original strand, 79838 - 79967
Alignment:
Q  639 aaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattnnnnnnnntggcaaaagtgatcccctatgtttacccccttttgcaa 738  Q
    ||||||||| |||||||| ||||||||||||||| || ||||||||||||| ||        |||||||||||| | || || ||||||||||||| |||    
T  79838 aaacgcactatttaccccttaagtttgcaaaagtagcgattttggccccct-ttaaaaaaaatggcaaaagtga-ctcccatatttacccccttttacaa 79935  T
Q  739 aacgtcaattttgacccagtcaaccccatgtg 770  Q
    ||| |||||||||||  |||||| || |||||    
T  79936 aacatcaattttgactgagtcaatcctatgtg 79967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 786 - 896
Target Start/End: Original strand, 746 - 860
Alignment:
Q  786 atttattattggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttgg-cccctatt--aaaaaatagcaattttggcccctttcat- 881  Q
    ||||||| | |||||||||||||||||  ||| ||| ||||| ||||||||| ||||||| ||||||||  ||||||| |||||||||||||| ||| |     
T  746 atttattctaggctaaactgcacttttcaccccttaagtttcgaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcgtc 845  T
Q  882 ccaaaattgctgaga 896  Q
    ||||||||| |||||    
T  846 ccaaaattgttgaga 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 828 - 896
Target Start/End: Complemental strand, 5014 - 4947
Alignment:
Q  828 aaaatgttgcaattttggcccctattaaaaaatagcaattttggcccctttcat-ccaaaattgctgaga 896  Q
    |||| ||||||||||||| ||||  ||||||| |||||||||| |||||||||| |||||||||||||||    
T  5014 aaaaagttgcaattttggtccct--taaaaaaaagcaattttgacccctttcatcccaaaattgctgaga 4947  T

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Target: scaffold0174 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 794 - 850
Target Start/End: Complemental strand, 29993 - 29937
Alignment:
Q  794 ttggctaaactgcacttttggccctttatgtttcaaaatgttgcaattttggcccct 850  Q
    ||||||||||| ||||||| | || ||| |||| |||||||||||||||||||||||    
T  29993 ttggctaaactacactttttgtcccttaagttttaaaatgttgcaattttggcccct 29937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 638 - 692
Target Start/End: Complemental strand, 32471 - 32417
Alignment:
Q  638 aaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||||||||| || ||||||||| |||  ||||||||| ||||||||||||||||    
T  32471 aaaacgcactcttgaccccctaactttataaaagttgcgattttggccccctatt 32417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 638 - 692
Target Start/End: Original strand, 4062 - 4116
Alignment:
Q  638 aaaacgcactttttaccccctaagtttgcaaaagttgcaattttggccccctatt 692  Q
    |||||||||| || ||||||||| |||  ||||||||| ||||||||||||||||    
T  4062 aaaacgcactcttgaccccctaactttataaaagttgcgattttggccccctatt 4116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 690
Target Start/End: Original strand, 31974 - 32035
Alignment:
Q  629 tatttggctaaaacgcactttttaccccctaagtttgcaaaagttgcaattttggcccccta 690  Q
    ||||||||| ||  ||||||||  |||||||  ||| |||||||||||||||||||||||||    
T  31974 tatttggcttaattgcacttttggccccctatctttccaaaagttgcaattttggcccccta 32035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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