View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5505-Insertion-8 (Length: 96)
Name: NF5505-Insertion-8
Description: NF5505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5505-Insertion-8 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 56; Significance: 9e-24; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 27762757 - 27762812
Alignment:
| Q |
8 |
attacacagcttgttatgttgtttttatgcttatttctatatagatttgggtccac |
63 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27762757 |
attacacagcttgttatgttgtttttatgcttatttctatatagatttgggtccac |
27762812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University