View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5507_low_2 (Length: 254)

Name: NF5507_low_2
Description: NF5507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5507_low_2
NF5507_low_2
[»] chr2 (39 HSPs)
chr2 (7-252)||(23177734-23177980)
chr2 (7-252)||(23588991-23589237)
chr2 (7-252)||(12852946-12853192)
chr2 (7-183)||(6708789-6708965)
chr2 (9-209)||(3528076-3528278)
chr2 (35-212)||(14714592-14714770)
chr2 (35-212)||(4512206-4512384)
chr2 (30-212)||(41296287-41296470)
chr2 (12-212)||(21010312-21010514)
chr2 (90-252)||(29424505-29424668)
chr2 (63-252)||(7983561-7983751)
chr2 (103-251)||(4829526-4829675)
chr2 (96-252)||(7037026-7037183)
chr2 (189-252)||(40174757-40174820)
chr2 (96-252)||(3532254-3532411)
chr2 (97-245)||(14509276-14509425)
chr2 (103-211)||(26205114-26205223)
chr2 (98-247)||(15850561-15850710)
chr2 (108-249)||(28109780-28109922)
chr2 (186-251)||(7490185-7490250)
chr2 (189-252)||(6706986-6707049)
chr2 (130-252)||(10367299-10367422)
chr2 (130-252)||(12959638-12959761)
chr2 (205-251)||(42027254-42027300)
chr2 (35-72)||(14714901-14714938)
chr2 (96-252)||(35799572-35799729)
chr2 (189-252)||(1624969-1625032)
chr2 (193-252)||(2581863-2581922)
chr2 (193-252)||(2583543-2583602)
chr2 (189-252)||(10368378-10368441)
chr2 (221-252)||(12854129-12854160)
chr2 (189-252)||(12958476-12958539)
chr2 (201-252)||(14510514-14510565)
chr2 (189-252)||(21012073-21012136)
chr2 (189-252)||(37867816-37867879)
chr2 (130-252)||(37868973-37869096)
chr2 (103-252)||(42249690-42249838)
chr2 (189-242)||(23178875-23178928)
chr2 (189-242)||(23590132-23590185)
[»] scaffold1974 (1 HSPs)
scaffold1974 (7-252)||(438-684)
[»] scaffold1878 (1 HSPs)
scaffold1878 (7-252)||(590-836)
[»] chr3 (42 HSPs)
chr3 (7-252)||(11219490-11219736)
chr3 (7-252)||(32979148-32979394)
chr3 (35-252)||(17349940-17350158)
chr3 (35-252)||(39133077-39133295)
chr3 (30-252)||(53808378-53808601)
chr3 (51-212)||(7483379-7483541)
chr3 (7-252)||(47765498-47765746)
chr3 (15-251)||(8371281-8371518)
chr3 (30-212)||(34902827-34903010)
chr3 (103-252)||(12062290-12062440)
chr3 (36-250)||(25583176-25583389)
chr3 (189-252)||(32980445-32980508)
chr3 (103-252)||(21127985-21128135)
chr3 (84-252)||(23559879-23560049)
chr3 (58-132)||(7483254-7483328)
chr3 (135-252)||(19622065-19622183)
chr3 (186-251)||(26798896-26798961)
chr3 (189-252)||(47855331-47855394)
chr3 (189-251)||(49334330-49334392)
chr3 (189-250)||(25585826-25585887)
chr3 (193-245)||(2124096-2124148)
chr3 (189-245)||(29537135-29537191)
chr3 (189-252)||(29536774-29536837)
chr3 (76-196)||(31638234-31638354)
chr3 (193-252)||(42633883-42633942)
chr3 (193-252)||(47806878-47806936)
chr3 (193-252)||(51825618-51825677)
chr3 (205-251)||(19253011-19253057)
chr3 (189-247)||(43345384-43345442)
chr3 (111-252)||(43346361-43346503)
chr3 (194-252)||(54653964-54654022)
chr3 (165-241)||(35174350-35174427)
chr3 (184-252)||(51400275-51400343)
chr3 (216-252)||(51401371-51401407)
chr3 (189-252)||(8372609-8372672)
chr3 (205-252)||(11220667-11220714)
chr3 (205-252)||(49122011-49122058)
chr3 (94-252)||(49333043-49333200)
chr3 (195-252)||(10987652-10987709)
chr3 (195-252)||(47808105-47808162)
chr3 (189-249)||(17345374-17345433)
chr3 (200-252)||(43101954-43102006)
[»] chr1 (42 HSPs)
chr1 (7-252)||(26055957-26056203)
chr1 (12-212)||(50678463-50678663)
chr1 (35-210)||(51218803-51218980)
chr1 (30-212)||(30551422-30551605)
chr1 (30-212)||(37624403-37624586)
chr1 (37-245)||(14764296-14764505)
chr1 (7-252)||(9633835-9634082)
chr1 (30-212)||(23081959-23082142)
chr1 (30-212)||(27689383-27689570)
chr1 (7-209)||(52742785-52742989)
chr1 (135-252)||(49141434-49141552)
chr1 (127-211)||(44977322-44977407)
chr1 (189-252)||(13641317-13641380)
chr1 (190-252)||(36511325-36511387)
chr1 (130-249)||(21277057-21277177)
chr1 (165-251)||(14169680-14169767)
chr1 (94-252)||(22167839-22167993)
chr1 (130-252)||(51726777-51726900)
chr1 (103-212)||(22766726-22766836)
chr1 (189-252)||(49139861-49139924)
chr1 (194-252)||(3979311-3979369)
chr1 (186-252)||(14071193-14071259)
chr1 (186-252)||(19466195-19466261)
chr1 (186-252)||(36509871-36509937)
chr1 (186-251)||(40811256-40811321)
chr1 (191-251)||(14390319-14390379)
chr1 (193-252)||(25786028-25786087)
chr1 (193-252)||(47411044-47411103)
chr1 (186-252)||(13930665-13930731)
chr1 (167-252)||(24517584-24517670)
chr1 (191-252)||(19464660-19464721)
chr1 (195-252)||(52181304-52181361)
chr1 (129-252)||(8092658-8092782)
chr1 (193-249)||(16218475-16218531)
chr1 (208-252)||(47411460-47411504)
chr1 (193-252)||(16217500-16217559)
chr1 (193-252)||(25787161-25787220)
chr1 (193-252)||(47136684-47136743)
chr1 (96-162)||(14478420-14478486)
chr1 (195-252)||(3978104-3978161)
chr1 (187-252)||(14765085-14765150)
chr1 (187-252)||(40109421-40109486)
[»] chr5 (35 HSPs)
chr5 (12-251)||(21387698-21387937)
chr5 (12-251)||(18693759-18693999)
chr5 (103-252)||(2167421-2167570)
chr5 (30-178)||(7426776-7426924)
chr5 (84-252)||(32734191-32734360)
chr5 (96-252)||(40058078-40058235)
chr5 (186-252)||(42510174-42510240)
chr5 (103-243)||(22819424-22819564)
chr5 (165-252)||(12830906-12830994)
chr5 (165-252)||(12862886-12862974)
chr5 (189-251)||(1273150-1273212)
chr5 (191-252)||(15614955-15615016)
chr5 (84-252)||(19525175-19525344)
chr5 (157-252)||(7345350-7345446)
chr5 (204-252)||(19827148-19827196)
chr5 (130-252)||(5383002-5383125)
chr5 (189-252)||(5384339-5384402)
chr5 (193-252)||(10085842-10085901)
chr5 (189-252)||(12936095-12936158)
chr5 (189-252)||(15613565-15613628)
chr5 (189-252)||(15857611-15857674)
chr5 (193-245)||(32735476-32735528)
chr5 (189-252)||(12950253-12950316)
chr5 (205-252)||(18678036-18678083)
chr5 (205-252)||(22819558-22819605)
chr5 (189-252)||(38473548-38473611)
chr5 (103-236)||(15856609-15856743)
chr5 (189-251)||(22812380-22812442)
chr5 (195-252)||(1663247-1663304)
chr5 (186-247)||(38471354-38471415)
chr5 (205-252)||(326404-326451)
chr5 (189-252)||(5975816-5975879)
chr5 (189-252)||(18695640-18695703)
chr5 (205-252)||(42980718-42980765)
chr5 (200-252)||(42979508-42979560)
[»] scaffold0290 (2 HSPs)
scaffold0290 (98-252)||(9379-9534)
scaffold0290 (189-251)||(8440-8502)
[»] scaffold0051 (2 HSPs)
scaffold0051 (25-252)||(39729-39957)
scaffold0051 (189-251)||(22188-22250)
[»] chr8 (53 HSPs)
chr8 (9-252)||(37276038-37276299)
chr8 (30-252)||(36756124-36756348)
chr8 (7-247)||(7486142-7486383)
chr8 (35-250)||(13513482-13513698)
chr8 (35-250)||(13603015-13603231)
chr8 (35-212)||(21670164-21670342)
chr8 (12-212)||(10052204-10052405)
chr8 (36-252)||(39546516-39546733)
chr8 (35-212)||(44103132-44103312)
chr8 (30-212)||(13363411-13363594)
chr8 (42-212)||(21961923-21962094)
chr8 (9-193)||(45541603-45541783)
chr8 (94-251)||(35943969-35944127)
chr8 (94-252)||(2421189-2421349)
chr8 (146-243)||(36938750-36938848)
chr8 (103-245)||(13366956-13367099)
chr8 (42-247)||(117113-117318)
chr8 (103-252)||(24069352-24069502)
chr8 (84-252)||(19913552-19913720)
chr8 (103-249)||(16363719-16363865)
chr8 (35-212)||(39325671-39325850)
chr8 (94-252)||(44606199-44606358)
chr8 (130-252)||(36070238-36070361)
chr8 (189-252)||(37274947-37275010)
chr8 (103-252)||(8095406-8095556)
chr8 (103-252)||(34617101-34617251)
chr8 (84-252)||(20308665-20308834)
chr8 (84-252)||(21095298-21095467)
chr8 (189-252)||(29739636-29739699)
chr8 (186-243)||(8395064-8395121)
chr8 (103-211)||(21267233-21267342)
chr8 (195-252)||(31625383-31625440)
chr8 (200-252)||(38591011-38591063)
chr8 (192-247)||(36071374-36071429)
chr8 (189-252)||(36940026-36940089)
chr8 (193-251)||(3237478-3237536)
chr8 (103-252)||(7796714-7796863)
chr8 (103-252)||(7815995-7816144)
chr8 (186-252)||(29738351-29738417)
chr8 (103-252)||(39515259-39515409)
chr8 (203-252)||(19914913-19914962)
chr8 (188-252)||(22619955-22620019)
chr8 (193-249)||(27750618-27750674)
chr8 (203-251)||(43277928-43277976)
chr8 (189-252)||(24068390-24068453)
chr8 (186-245)||(31871462-31871521)
chr8 (205-252)||(37472463-37472510)
chr8 (193-252)||(41866954-41867013)
chr8 (96-154)||(9854775-9854833)
chr8 (205-251)||(35945446-35945492)
chr8 (186-252)||(39220739-39220805)
chr8 (222-254)||(36734570-36734602)
chr8 (81-154)||(38696470-38696545)
[»] chr6 (21 HSPs)
chr6 (8-117)||(34084045-34084154)
chr6 (48-252)||(18139337-18139543)
chr6 (7-252)||(33801826-33802073)
chr6 (96-252)||(31738423-31738580)
chr6 (189-252)||(22299896-22299959)
chr6 (94-252)||(293538-293696)
chr6 (93-251)||(27440071-27440230)
chr6 (103-218)||(2130877-2130993)
chr6 (193-252)||(8412313-8412372)
chr6 (205-252)||(31740281-31740328)
chr6 (63-207)||(13507038-13507182)
chr6 (130-252)||(14328707-14328830)
chr6 (130-252)||(14421717-14421840)
chr6 (189-252)||(27438850-27438913)
chr6 (103-154)||(7312187-7312237)
chr6 (189-252)||(33807749-33807812)
chr6 (186-252)||(9927666-9927731)
chr6 (96-162)||(11722940-11723006)
chr6 (210-252)||(34084148-34084190)
chr6 (195-252)||(8411146-8411203)
chr6 (93-138)||(16268716-16268761)
[»] scaffold0098 (2 HSPs)
scaffold0098 (37-243)||(40977-41184)
scaffold0098 (193-252)||(42343-42402)
[»] scaffold0084 (1 HSPs)
scaffold0084 (35-251)||(13042-13259)
[»] chr4 (53 HSPs)
chr4 (35-210)||(2293362-2293539)
chr4 (35-251)||(43894166-43894383)
chr4 (37-252)||(38418857-38419073)
chr4 (12-252)||(44302780-44303011)
chr4 (7-252)||(11094586-11094831)
chr4 (36-212)||(29687817-29687994)
chr4 (30-247)||(35787861-35788079)
chr4 (51-212)||(36604694-36604857)
chr4 (7-252)||(47668413-47668653)
chr4 (96-252)||(38370342-38370500)
chr4 (84-249)||(6140247-6140413)
chr4 (146-249)||(86866-86970)
chr4 (30-252)||(39592123-39592345)
chr4 (103-252)||(26393033-26393183)
chr4 (186-252)||(34438466-34438532)
chr4 (103-252)||(56000347-56000497)
chr4 (30-139)||(52980158-52980267)
chr4 (103-252)||(3533514-3533664)
chr4 (190-247)||(34439654-34439711)
chr4 (116-252)||(50530563-50530700)
chr4 (188-252)||(11113802-11113866)
chr4 (193-252)||(33377361-33377420)
chr4 (189-252)||(44304972-44305035)
chr4 (195-252)||(5687235-5687292)
chr4 (61-252)||(6616074-6616267)
chr4 (116-252)||(44159145-44159281)
chr4 (204-252)||(27408823-27408871)
chr4 (76-136)||(36604586-36604646)
chr4 (186-249)||(11114970-11115033)
chr4 (186-245)||(52660204-52660263)
chr4 (103-251)||(29663703-29663852)
chr4 (165-252)||(17319102-17319190)
chr4 (193-249)||(26788585-26788641)
chr4 (193-252)||(5688634-5688693)
chr4 (189-252)||(15446663-15446726)
chr4 (205-252)||(28103495-28103542)
chr4 (185-252)||(30683016-30683083)
chr4 (189-252)||(33376278-33376341)
chr4 (103-252)||(43419282-43419431)
chr4 (193-251)||(6139058-6139116)
chr4 (168-252)||(31712477-31712562)
chr4 (193-246)||(44126664-44126717)
chr4 (103-251)||(56296254-56296403)
chr4 (200-252)||(15787506-15787558)
chr4 (200-252)||(27410687-27410738)
chr4 (189-252)||(40146616-40146679)
chr4 (189-252)||(46796019-46796082)
chr4 (103-252)||(48207625-48207773)
chr4 (193-252)||(50531753-50531812)
chr4 (189-252)||(53400245-53400308)
chr4 (193-251)||(37559059-37559117)
chr4 (205-251)||(55953861-55953907)
chr4 (186-251)||(15787013-15787078)
[»] chr7 (41 HSPs)
chr7 (35-211)||(24494887-24495066)
chr7 (30-252)||(4167511-4167734)
chr7 (41-229)||(14108915-14109104)
chr7 (41-229)||(14418872-14419061)
chr7 (130-252)||(46458646-46458769)
chr7 (37-139)||(35315077-35315179)
chr7 (90-252)||(38406078-38406240)
chr7 (84-252)||(25154820-25154992)
chr7 (164-252)||(40930478-40930567)
chr7 (189-252)||(24873590-24873653)
chr7 (103-252)||(26406185-26406335)
chr7 (190-252)||(46457130-46457192)
chr7 (186-250)||(43930381-43930445)
chr7 (189-252)||(13446651-13446714)
chr7 (30-252)||(18801275-18801498)
chr7 (189-251)||(4858337-4858399)
chr7 (167-251)||(4857262-4857347)
chr7 (165-249)||(27899182-27899267)
chr7 (53-252)||(19848690-19848890)
chr7 (205-252)||(19278413-19278460)
chr7 (193-252)||(22746317-22746376)
chr7 (205-252)||(25153718-25153765)
chr7 (184-247)||(35315210-35315273)
chr7 (189-247)||(14206738-14206796)
chr7 (189-247)||(14215428-14215486)
chr7 (95-252)||(33459441-33459599)
chr7 (201-251)||(35127871-35127921)
chr7 (205-251)||(36702959-36703005)
chr7 (93-138)||(131895-131940)
chr7 (193-250)||(22061792-22061849)
chr7 (195-252)||(46674933-46674990)
chr7 (203-251)||(36702838-36702886)
chr7 (189-245)||(47163220-47163276)
chr7 (193-252)||(22060523-22060582)
chr7 (193-252)||(43006445-43006504)
chr7 (209-252)||(43935245-43935288)
chr7 (186-252)||(13286984-13287050)
chr7 (98-247)||(35484212-35484361)
chr7 (206-252)||(45719675-45719721)
chr7 (195-252)||(22744806-22744863)
chr7 (195-252)||(40926518-40926575)
[»] scaffold0015 (1 HSPs)
scaffold0015 (42-212)||(207643-207814)
[»] scaffold0025 (2 HSPs)
scaffold0025 (7-252)||(56507-56756)
scaffold0025 (189-252)||(54651-54714)
[»] scaffold0003 (2 HSPs)
scaffold0003 (93-251)||(47131-47290)
scaffold0003 (189-252)||(48449-48512)
[»] scaffold0045 (1 HSPs)
scaffold0045 (103-247)||(77085-77232)
[»] scaffold0122 (1 HSPs)
scaffold0122 (103-238)||(16019-16155)
[»] scaffold0178 (1 HSPs)
scaffold0178 (189-252)||(2258-2321)
[»] scaffold0013 (1 HSPs)
scaffold0013 (203-252)||(96220-96269)
[»] scaffold0007 (1 HSPs)
scaffold0007 (195-251)||(145868-145924)
[»] scaffold2127 (1 HSPs)
scaffold2127 (193-252)||(512-571)


Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 23177980 - 23177734
Alignment:
Q  7 gagatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaa 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23177980 gagatgaagatgaagaaaatgataaaagaattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtccgcatttaaagaaaa 23177881  T
Q  107 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagat-ttttatgttaaaaactaacagagatg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |    
T  23177880 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcatcttagattttttatgttaaaaactaacggagagg 23177781  T
Q  206 accaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  23177780 accaaaatggtaaacggcagaagatttatgggaccaaattgagacac 23177734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 23589237 - 23588991
Alignment:
Q  7 gagatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaa 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23589237 gagatgaagatgaagaaaatgataaaagaattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtccgcatttaaagaaaa 23589138  T
Q  107 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagat-ttttatgttaaaaactaacagagatg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |    
T  23589137 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcatcttagattttttatgttaaaaactaacggagagg 23589038  T
Q  206 accaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  23589037 accaaaatggtaaacggcagaagatttatgggaccaaattgagacac 23588991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 12853192 - 12852946
Alignment:
Q  7 gagatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaa 106  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||| |||| |||||||||||||| | ||||||||||| ||||||| ||||||||| |    
T  12853192 gagaagaagatgaagaaaatgagaaaagtgttaggtgttagtggttgacaggaaagtacaatagactctacataattcaatggtcctcttttaaagaata 12853093  T
Q  107 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagagatg 205  Q
    ||||||||||||||||||  ||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  12853092 aatcaaatggttaaaattcaaaaatttaatacggtctatggtgaaccacctttaaatatggttcaccttagatttttgatgttaaaatctaacggagatg 12852993  T
Q  206 accaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||| ||||||   |||||||||||||||||||||||||||||    
T  12852992 accaaaatagtaaacgatagaagatttatgggaccaaattgagacac 12852946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 7 - 183
Target Start/End: Original strand, 6708789 - 6708965
Alignment:
Q  7 gagatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaa 106  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||  ||||||||| |    
T  6708789 gagaagaagatgaagaaaatgagaaaagtgttaggtgttagtggttcacaggaaagtgcaatagaccctacataattcaacggtccttttttaaagaata 6708888  T
Q  107 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt 183  Q
    ||||||||||||||||||||||||||||||| | | || ||||||||| ||||||||||||||||||| ||| ||||    
T  6708889 aatcaaatggttaaaattagaaaatttaatacggtttatggtgaaccacctttaaatatggttcacctcagactttt 6708965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 3528076 - 3528278
Alignment:
Q  9 gatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaag-aaaaa 107  Q
    |||||| ||||||||| ||| |||| ||||||||||||   |||||||||||| ||||||| |||| ||||||||||| ||||||| ||||||| |||||    
T  3528076 gatgaaaatgaagaaagtgagaaaaatattaggtgttataagttcacagtaaaatacaatacaccctacataattcaatggtcctcttttaaaggaaaaa 3528175  T
Q  108 atcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatga 206  Q
    ||||| |||||||||||| ||||||||||| | |||| ||||||||| ||||||||||||||||||||||| ||||  | ||||||||||| ||||| ||    
T  3528176 atcaactggttaaaattaaaaaatttaatacggtctatggtgaaccacctttaaatatggttcaccttagacttttgctattaaaaactaatagagaaga 3528275  T
Q  207 cca 209  Q
    |||    
T  3528276 cca 3528278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 14714770 - 14714592
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaattta 134  Q
    ||||||||||||||||||||||||||| |||||||||| | |||| ||||||||||| || |||||||||||||||||||||||  ||||| |||| |||    
T  14714770 tattaggtgttagtggttcacagtaaaatacaatagactctacatgattcaacggtcatcttttaaagaaaaaatcaaatggttgcaattaaaaaaatta 14714671  T
Q  135 ataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa 212  Q
    |||||   || |||| |||| |||||||||||||||||||||||  ||| ||||||||||||||| |||| ||||||||    
T  14714670 ataaggcgtatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacggagaggaccaaaa 14714592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 4512384 - 4512206
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaattta 134  Q
    |||||||||| | ||||||||||||||||| ||||||||| |||| ||||||||||| || |||||||||||||||||||||| ||||||| |||| |||    
T  4512384 tattaggtgtgaatggttcacagtaaagtataatagaccccacatgattcaacggtcatcttttaaagaaaaaatcaaatggtcaaaattaaaaaaatta 4512285  T
Q  135 ataagatctacggtgaaccatctttaaatatggttcaccttagat-ttttatgttaaaaactaacagagatgaccaaaa 212  Q
    |||||   || |||| ||||  ||| ||||||||||||||||||| ||| ||||||||||||||  |||| ||||||||    
T  4512284 ataaggcatatggtggaccactttttaatatggttcaccttagatatttgatgttaaaaactaatggagaggaccaaaa 4512206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 212
Target Start/End: Original strand, 41296287 - 41296470
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| ||||||||||||||| |||||| |||| ||||||||| || |||| ||  |||  ||||| |||||||||||||||||| |||||| |||| |||    
T  41296287 aaaaatattaggtgttagtgattcacactaaaatacaatagatcctacatgatcgaacaatcctcttttaaagaaaaaatcaaaaggttaatattaaaaa 41296386  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa 212  Q
    ||||| ||||||| | |||| |||| |||| |||||| ||||| |||||  |||  |||||||||||||| |||| ||||||||    
T  41296387 atttactaagatccatggtgcaccaccttttaatatgattcactttagacatttggtgttaaaaactaacggagaggaccaaaa 41296470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 212
Target Start/End: Original strand, 21010312 - 21010514
Alignment:
Q  12 gaagatgaagaaaa-tgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatc 110  Q
    |||||||||||||| ||| |||| |||||||||||||||||||| | |||| |||||||||||| || | || ||||  |  || ||| ||||||||||     
T  21010312 gaagatgaagaaaagtgagaaaaatattaggtgttagtggttcataataaaatacaatagaccctacctgatccaacaattatctttttaagaaaaaatt 21010411  T
Q  111 aaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgacca 209  Q
    ||| ||||||||||  ||||||||||||| | || | |  |||| ||||||||| ||||||| |||||  ||| ||||||| |||||||||||| |||||    
T  21010412 aaagggttaaaatttaaaaatttaataaggtttatgatagaccacctttaaatacggttcacattagacatttgatgttaacaactaacagagaggacca 21010511  T
Q  210 aaa 212  Q
    |||    
T  21010512 aaa 21010514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 252
Target Start/End: Original strand, 29424505 - 29424668
Alignment:
Q  90 tcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgtt 188  Q
    ||||| ||||||| |||||||||| ||||||||||  ||||||||||||| |||| | || |||| ||||||| |||||||| ||||||  ||| |||||    
T  29424505 tcctcttttaaaggaaaaatcaaaaggttaaaatttaaaaatttaataaggtctatgatggaccacctttaaacatggttcatcttagacatttgatgtt 29424604  T
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |  |||||||||||| ||||||||   ||||| |||||| ||| | ||||||||||||| ||||    
T  29424605 agtaactaacagagaggaccaaaacaataaacggcagaatattcaagggaccaaattgaaacac 29424668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 252
Target Start/End: Original strand, 7983561 - 7983751
Alignment:
Q  63 tacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaa 162  Q
    |||||||||||| |||| || ||||   |||| |||||||||||||||||| || | |||||  |||||||||||||||||| |||| |||| |||||||    
T  7983561 tacaatagaccctacatcatccaacaaacctcttttaaagaaaaaatcaaaaggatgaaatttaaaaatttaataagatctatggtggaccacctttaaa 7983660  T
Q  163 tatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     |||||||||||||||  ||| |||||||||| | ||  | | ||| ||||  |||||| | |||||| |||| |||||||||||| ||||    
T  7983661 catggttcaccttagacatttgatgttaaaaattgacgaaaaggactaaaacagtaaacggtagaagacttataggaccaaattgacacac 7983751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 251
Target Start/End: Complemental strand, 4829675 - 4829526
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    ||||||||||||||||| |||||||||  || || || |||| |||| |||| || ||||  ||||| ||||||||| |||| | ||||| |||||||||    
T  4829675 aaaaaatcaaatggttagaattagaaagatttatgaggtctatggtggaccacctataaagttggtttaccttagatatttaaggttaaacactaacaga 4829576  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    || ||||||||| ||||||  || |||||||||| || ||||||||||||    
T  4829575 gaggaccaaaatagtaaacgacataagatttatgagatcaaattgagaca 4829526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 252
Target Start/End: Complemental strand, 7037183 - 7037026
Alignment:
Q  96 tttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaac 194  Q
    |||||| |||| |||||| |||||||| |  || |||||||||| | ||||||| | || || ||||  || |||||||||||| |||| | |||||||     
T  7037183 tttaaaaaaaagatcaaacggttaaaaatgaaagatttaataaggtttacggtggatcacctataaagttgattcaccttagatatttaaggttaaaaat 7037084  T
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     ||| || |||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  7037083 aaacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattgaaacac 7037026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 40174757 - 40174820
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  40174757 aaaaactaacggagatgaccaaaatagtaaacaacagaagatttatgggaccaaattgaaacac 40174820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 252
Target Start/End: Complemental strand, 3532411 - 3532254
Alignment:
Q  96 tttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaac 194  Q
    |||||||||||||||||||||||||||| | |   |||| |||    || |||| |||| ||||||||||||||||||||| |  |||| |||||||||     
T  3532411 tttaaagaaaaaatcaaatggttaaaataaaattttttagtaatgcatatggtggaccacctttaaatatggttcaccttaaacatttaatgttaaaaat 3532312  T
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     |||||||||||| ||||| |||||   || |||| ||||| ||||||||||| ||||    
T  3532311 caacagagatgactaaaatagtaaatgacaaaagacttatgtgaccaaattgacacac 3532254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 14509425 - 14509276
Alignment:
Q  97 ttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaact 195  Q
    ||||| |||| |||||| |||||||| || ||  ||||||||| |||| |||| |||| || ||||  ||||| ||||||||  |||| | ||||||| |    
T  14509425 ttaaaaaaaatatcaaacggttaaaaataaaaggtttaataaggtctatggtggaccacctataaagttggtttaccttagacatttaaggttaaaaatt 14509326  T
Q  196 aacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaatt 245  Q
    ||| |||| ||||||||| ||||||  |||||||||||||||||| ||||    
T  14509325 aacggagaggaccaaaatagtaaacgacagaagatttatgggaccgaatt 14509276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 26205223 - 26205114
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacaga 201  Q
    ||||||||||||||||||||||  |||| ||||||||   || |||| ||||  ||||| ||||||||||||||||  ||| ||||||||||||||| ||    
T  26205223 aaaaaatcaaatggttaaaatttaaaaaattaataaggcatatggtggaccacttttaagtatggttcaccttagacatttgatgttaaaaactaacgga 26205124  T
Q  202 gatgaccaaa 211  Q
    || |||||||    
T  26205123 gaggaccaaa 26205114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 247
Target Start/End: Original strand, 15850561 - 15850710
Alignment:
Q  98 taaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaacta 196  Q
    |||| |||| |||||| ||||||||||| ||||| || ||||||||| |||| |||| || |||   ||||||||||||||  |||| | ||||||||||    
T  15850561 taaacaaaagatcaaagggttaaaatta-aaaatctattaagatctatggtggaccacctataatgttggttcaccttagacatttagggttaaaaacta 15850659  T
Q  197 acagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattga 247  Q
    ||  ||  ||||||||| |  |||||||||||| ||||| |||||||||||    
T  15850660 acgaagtggaccaaaataggtaacagcagaagagttatgagaccaaattga 15850710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 249
Target Start/End: Original strand, 28109780 - 28109922
Alignment:
Q  108 atcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacagagatga 206  Q
    |||||| ||||||||||| |  | || |||||||| | |||| |||| ||  |||  ||||||||||||||  |||| | ||||||| |||| |||| ||    
T  28109780 atcaaagggttaaaattaaatgaatttataagatccatggtggaccacctacaaagttggttcaccttagacatttaaggttaaaaaataacggagagga 28109879  T
Q  207 ccaaaatggtaaacagcagaagatttatgggaccaaattgaga 249  Q
    ||||||||||||||  ||||| | |||||||||||||||||||    
T  28109880 ccaaaatggtaaactacagaaaagttatgggaccaaattgaga 28109922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 7490185 - 7490250
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||||||||| || | ||||||||| |||||||  | ||||||||||||||||||||||||||    
T  7490185 gttaaaaactaacggataagaccaaaatagtaaacaataaaagatttatgggaccaaattgagaca 7490250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 6707049 - 6706986
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||  ||||||||| |||||| | ||||||||||||| |||||||||||||||    
T  6707049 aaaaactaacggaggggaccaaaatagtaaacggaagaagatttatggaaccaaattgagacac 6706986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 10367422 - 10367299
Alignment:
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| ||||  ||| |||| || ||||  ||||||||||||||  |||| | |||||||| ||| |||| ||| |||| ||||||| |||||||    
T  10367422 atttaataaggtctattgtggaccacctataaagttggttcaccttagacatttaaggttaaaaacaaacggagacgactaaaaaggtaaacggcagaag 10367323  T
Q  229 atttatgggaccaaattgagacac 252  Q
    | ||||| ||| ||||||||||||    
T  10367322 acttatgagactaaattgagacac 10367299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 12959638 - 12959761
Alignment:
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| ||||  ||| |||| || ||||  ||||||||||||||  |||| | ||||| || ||| |||| || ||||| ||||||| |||||||    
T  12959638 atttaataaggtctattgtggaccacctataaagttggttcaccttagacatttaaggttaaagacaaacggagaggatcaaaaaggtaaacggcagaag 12959737  T
Q  229 atttatgggaccaaattgagacac 252  Q
    |||||| |||| ||||||||||||    
T  12959738 atttatcggactaaattgagacac 12959761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 42027300 - 42027254
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||| | ||||||||||||| |||||||||||||||||||||||    
T  42027300 gaccaaagtagtaaacagcagaaaatttatgggaccaaattgagaca 42027254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 14714938 - 14714901
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagac 72  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  14714938 tattaggtgttagtggttcacagtaaaatacaatagac 14714901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 252
Target Start/End: Complemental strand, 35799729 - 35799572
Alignment:
Q  96 tttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaac 194  Q
    |||||| |||| |||||| ||||||||||| || |||||||||  |||| |||  ||||  | ||||  || |||||||||||  ||| | ||||||| |    
T  35799729 tttaaaaaaaagatcaaacggttaaaattataacatttaataaagtctatggtagaccacttataaagttgattcaccttagacatttaaggttaaaagc 35799630  T
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||| |||||||  ||||||| | |||| | ||||| ||||||||||||||||    
T  35799629 taacggagaggaccaaagaggtaaacggaagaaaagttatgagaccaaattgagacac 35799572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 1624969 - 1625032
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| |||| ||||||||| |||||  ||| ||||||||| |||||||||||||||||    
T  1624969 aaaaattaacggagaagaccaaaatagtaaatggcataagatttataggaccaaattgagacac 1625032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 2581922 - 2581863
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||| |||||| || |||||| ||  |||||||||||||||||||||||||||    
T  2581922 actaacggagaggaccaagatagtaaacggcgtaagatttatgggaccaaattgagacac 2581863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 2583543 - 2583602
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||| |||||| || ||||||||   |||||||||| ||||||||||||||||    
T  2583543 actaacagagaggaccaagatagtaaacagtgtaagatttatgagaccaaattgagacac 2583602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 10368378 - 10368441
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| ||| || |||||||||||| ||||| | |||| |||||||||| |||||||||||||    
T  10368378 aaaaacaaacggacatgaccaaaatgataaacggaagaaaatttatgggatcaaattgagacac 10368441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 252
Target Start/End: Original strand, 12854129 - 12854160
Alignment:
Q  221 agcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||||||||||||||||||||    
T  12854129 agcagaagatttatgggaccaaattgagacac 12854160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 12958539 - 12958476
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| ||| || |||||||||||| ||||  | |||| ||||||||||||||||||||||||    
T  12958539 aaaaacaaacggaaatgaccaaaatgataaatggaagaaaatttatgggaccaaattgagacac 12958476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 14510514 - 14510565
Alignment:
Q  201 agatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||| ||||| |||||| |||||||| |||| |||||||||||||||||    
T  14510514 agatgactaaaatagtaaacggcagaagagttataggaccaaattgagacac 14510565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 21012073 - 21012136
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||||||||||||| ||||||  | ||||||||  ||||||||||||| ||||    
T  21012073 aaaaactaacggagatgaccaaaatagtaaacgacggaagatttgagggaccaaattgaaacac 21012136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 37867879 - 37867816
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||||| |||||||||||| |||||   |||| |||| |||||||||||||||||||    
T  37867879 aaaaacaaacagacatgaccaaaatgataaacgaaagaaaatttgtgggaccaaattgagacac 37867816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 37868973 - 37869096
Alignment:
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| ||||  ||| |||| || ||||  ||| ||||||||||  |||| | |||||||| ||| |||| |||||||| |||||||  ||||||    
T  37868973 atttaataaggtctattgtggaccacctataaagttggctcaccttagacatttaaggttaaaaacaaacggagaagaccaaaaaggtaaacgacagaag 37869072  T
Q  229 atttatgggaccaaattgagacac 252  Q
    | ||||| ||| ||||||||||||    
T  37869073 acttatgagactaaattgagacac 37869096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 42249690 - 42249838
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||| |||||| ||||||||||| |||||||||||| ||||| |||  | |  |||  ||  ||||||||||||||  |||| | ||||||| |||||||    
T  42249690 aaaagatcaaacggttaaaattaaaaaatttaataaaatctatggtagatc--cttataagttggttcaccttagacatttaaggttaaaaaataacaga 42249787  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |  ||||| ||| |||||| | |||||| |||| |||| ||||||||||||    
T  42249788 ggagaccacaattgtaaacggtagaagagttataggactaaattgagacac 42249838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 23178875 - 23178928
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaa 242  Q
    |||||||||| ||||||||||||||  |||||  | ||||||||||||||||||    
T  23178875 aaaaactaacggagatgaccaaaataataaacgactgaagatttatgggaccaa 23178928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 23590132 - 23590185
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaa 242  Q
    |||||||||| ||||||||||||||  |||||  | ||||||||||||||||||    
T  23590132 aaaaactaacggagatgaccaaaataataaacgactgaagatttatgggaccaa 23590185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 7 - 252
Target Start/End: Original strand, 438 - 684
Alignment:
Q  7 gagatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaa 106  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  438 gagatgaagatgaagaaaatgataaaagtattaggtgttaatgattcacagtaaagtataatagacccgacataattcaacggttctcatttaaagaaaa 537  T
Q  107 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatg 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  538 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttttatgttaaaaactaacggagatg 637  T
Q  206 accaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  638 accaaaatggtaaacggcagaagatttatgggactaaattgagacac 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 836 - 590
Alignment:
Q  7 gagatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaa 106  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  836 gagatgaagatgaagaaaatgataaaagtattaggtgttaatgattcacagtaaagtataatagacccgacataattcaacggttctcatttaaagaaaa 737  T
Q  107 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagat-ttttatgttaaaaactaacagagatg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  736 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttttatgttaaaaactaacggagatg 637  T
Q  206 accaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  636 accaaaatggtaaacggcagaagatttatgggactaaattgagacac 590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 11219736 - 11219490
Alignment:
Q  7 gagatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaa 106  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  11219736 gagaagaagatgaagaaaatgagaaaagtgttaggtgttagtggttcacaggaaagtacaatagaccctacataattcaacggtcctcttttaaagaaaa 11219637  T
Q  107 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttag-atttttatgttaaaaactaacagagatg 205  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||| ||||| ||||||    
T  11219636 aatcaaatggttaaaattaaaaaatttaatacgatctatggtgaaccacctttaaatatggttcaccttagaattttgatgttaaaatctaacggagatg 11219537  T
Q  206 accaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||| |||||| |||||||| | ||| ||||||||||||||||    
T  11219536 accaaaatagtaaacggcagaagactcatgagaccaaattgagacac 11219490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 32979394 - 32979148
Alignment:
Q  7 gagatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaa 106  Q
    |||| ||||||||||||| ||| |||||||||||||||||||| || ||| |||||||||||| |||| |||||||||||| ||| || |||||||||      
T  32979394 gagaagaagatgaagaaagtgagaaaagtattaggtgttagtgatttacaataaagtacaatataccctacataattcaacagtcatcttttaaagaatc 32979295  T
Q  107 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttag-atttttatgttaaaaactaacagagatg 205  Q
    ||||||||||||||||||| ||||||||||| | |||| ||||||||| |||||||||| |||||||||||  |||| ||||||||||||||| |||| |    
T  32979294 aatcaaatggttaaaattaaaaaatttaatacggtctatggtgaaccacctttaaatatagttcaccttagtcttttaatgttaaaaactaacggagagg 32979195  T
Q  206 accaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||  |  ||  |||||| |||||||||| |||||||||||||    
T  32979194 accaaaagaggtaattgcagaaaatttatgggatcaaattgagacac 32979148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 35 - 252
Target Start/End: Original strand, 17349940 - 17350158
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaattta 134  Q
    |||||||||||||||||||||| |||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  17349940 tattaggtgttagtggttcacaataaagttcaatagaccctacatgattcaacggtcctcttttaaagaaaaaatcaaatggttaaaattaaaaaattta 17350039  T
Q  135 ataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagattta 233  Q
     ||||   || |||| |||| |||||||||||||||||||||||  ||| ||||||||||||||| |||| ||||||||  |  ||||| ||||||  ||    
T  17350040 gtaaggcatatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacggagaggaccaaaagaggtaacaggagaagacata 17350139  T
Q  234 tgggaccaaattgagacac 252  Q
     ||||||||||||||||||    
T  17350140 agggaccaaattgagacac 17350158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 35 - 252
Target Start/End: Complemental strand, 39133295 - 39133077
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaattta 134  Q
    |||||||||||||||||||||| ||||||||||||||||  |||| ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  39133295 tattaggtgttagtggttcacaataaagtacaatagaccttacatgattcaactgtcctcttttaaagaaaaaatcaaatggttaaaattaaaaaattta 39133196  T
Q  135 ataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa-tggtaaacagcagaagattt 232  Q
     ||||   || |||| |||| |||||||||||||||||||||||  ||| |||||||||||||||||||| ||||||||  |||||  || ||||||  |    
T  39133195 gtaaggcatatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacagagaggaccaaaagaggtaacgag-agaagacat 39133097  T
Q  233 atgggaccaaattgagacac 252  Q
    | ||||||||||||||||||    
T  39133096 aagggaccaaattgagacac 39133077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 53808601 - 53808378
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| ||||||||||||||||||||||||||| ||||||||| || |||| || ||||| | ||| |||||||||||||||||| ||||||||||  |||    
T  53808601 aaaaatattaggtgttagtggttcacagtaaaatacaatagatcctacatgatccaacgattctcttttaaagaaaaaatcaaagggttaaaatttaaaa 53808502  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttag-atttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| | || |||| |||| ||||| ||||| |||||||||| | ||| ||||||||||||||  |||||||||||||| ||||||  || |||    
T  53808501 atttaataaggtttatggtggaccacctttagatatgattcaccttagaaatttgatgttaaaaactaatggagatgaccaaaatagtaaacgacataag 53808402  T
Q  229 atttatgggaccaaattgagacac 252  Q
    ||||||||||||| ||||||||||    
T  53808401 atttatgggaccagattgagacac 53808378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 7483379 - 7483541
Alignment:
Q  51 ttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtga 150  Q
    |||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||   || ||||     
T  7483379 ttcacagtaaagtataatagaccccacatgattcaacggtcctcttttaaagaaaaaatcaaatggttaaaattaaaaaaattaataaggcatatggtgg 7483478  T
Q  151 accatctttaaatatggttcaccttagat-ttttatgttaaaaactaacagagatgaccaaaa 212  Q
     |||  ||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  7483479 gccactttttaatatggttcaccttagatatttgatgttaaaaactaacggagatgaccaaaa 7483541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 47765746 - 47765498
Alignment:
Q  7 gagatgaagatgaagaaaa-tgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaa 105  Q
    |||| |||||||||||||| ||| || | ||||| |||||||||||||||  |||| |||||||||||| |||| || ||||  ||||| ||||||||||    
T  47765746 gagaagaagatgaagaaaagtgaaaagaatattaagtgttagtggttcacgctaaaatacaatagaccctacatgatccaacaatcctcttttaaagaaa 47765647  T
Q  106 aaa-tcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagat-ttttatgttaaaaactaacagaga 203  Q
    ||| ||||| ||||||||||  |||||| |||||| |||| |||| |||||||||||  ||||||||||| |||| ||| ||||||||||||||| ||||    
T  47765646 aaaatcaaaaggttaaaatttaaaaattcaataaggtctatggtggaccatctttaacaatggttcacctaagatatttgatgttaaaaactaacggaga 47765547  T
Q  204 tgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||   |||||| | |||||| || |||| ||| |||||||||    
T  47765546 tgaccaaaacaataaacaacggaagatataagggatcaatttgagacac 47765498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 8371518 - 8371281
Alignment:
Q  15 gatgaagaaaa-tgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaa 113  Q
    ||||||||||| ||| |||| |||||||||||||||||| ||| || | ||||||||||   | || || ||||  ||||| ||||||||||||||||||    
T  8371518 gatgaagaaaagtgagaaaa-tattaggtgttagtggtttacaatagaatacaatagactatatatgatccaacaatcctcttttaaagaaaaaatcaaa 8371420  T
Q  114 tggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagagatgaccaaaa 212  Q
     ||||||||||| |||||||| |||| || | |||| |||| || ||| || ||||| | |||||| ||| ||||||||||||||| |||| ||||||||    
T  8371419 gggttaaaattaaaaaatttactaaggtccatggtggaccacctctaagtacggttcgctttagatatttgatgttaaaaactaacggagaggaccaaaa 8371320  T
Q  213 tggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    | |||||| ||||||||||||||| ||||||||||||||    
T  8371319 tagtaaactgcagaagatttatggaaccaaattgagaca 8371281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 212
Target Start/End: Original strand, 34902827 - 34903010
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| |||||||||||||||||||||| ||||  |||||| |||| |||| || ||||  ||||| ||||| |||||||||||| ||||||||||| |||    
T  34902827 aaaaatattaggtgttagtggttcacactaaaaaacaataaaccctacatgatccaacaatcctcttttaatgaaaaaatcaaaaggttaaaattaaaaa 34902926  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa 212  Q
    ||||| |||| || | |||| |||| ||||||||||||||||| |||||  |||  |||||||||||||| |||||||||||||    
T  34902927 atttactaaggtccatggtgcaccacctttaaatatggttcactttagacatttggtgttaaaaactaacggagatgaccaaaa 34903010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 12062290 - 12062440
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||||||||||||||||||| || || |||||||||| | || |||| | || || ||||  ||||||||||||||  |||| | |||||||||||  ||    
T  12062290 aaaaaatcaaatggttaaaaatacaagatttaataaggtatatggtggatcacctataaagttggttcaccttagacatttaaggttaaaaactaatgga 12062389  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     ||||||||||| |||||||||| |||| | ||||||||||||||||||||    
T  12062390 aatgaccaaaatagtaaacagcaaaagagtaatgggaccaaattgagacac 12062440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 250
Target Start/End: Complemental strand, 25583389 - 25583176
Alignment:
Q  36 attaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaa 135  Q
    ||||||||||  |||||||| |||| |||||| |||||  | ||||| ||||||| ||| ||| || |||| ||||||  |||||||||| |  | || |    
T  25583389 attaggtgttgatggttcaccgtaaggtacaacagacct-atataatccaacggttctctttttaaaaaaatatcaaaaagttaaaattaaatgaattta 25583291  T
Q  136 taagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttat 234  Q
    ||||  ||| |||| | || |||||| ||| |||| |||||||  |||| | ||||||| ||||||||| ||||||||| |||||| |||||||| ||||    
T  25583290 taaggcctatggtggagcacctttaa-tatagttcgccttagacatttaaggttaaaaattaacagagaggaccaaaatagtaaacggcagaagacttat 25583192  T
Q  235 gggaccaaattgagac 250  Q
    ||||||||||||||||    
T  25583191 gggaccaaattgagac 25583176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 32980445 - 32980508
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  32980445 aaaaactaacggagatgaccaaaatagtaaacggcagaagatttataggaccaaattgagacac 32980508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 21128135 - 21127985
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||| |||||||||||||||||| |||| ||  |||| |||| |||| |||| || |||   |||| |||||||||  |||| | ||||||||  || ||    
T  21128135 aaaatatcaaatggttaaaattaaaaaactttgtaaggtctatggtggaccacctataatgttggtccaccttagacatttagggttaaaaacagacgga 21128036  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     |||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  21128035 aatgaccaaaatggtaaacggcagaagagttatgggaccaaattgacacac 21127985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 252
Target Start/End: Complemental strand, 23560049 - 23559879
Alignment:
Q  84 caacggtcctcatttaaagaaaaa-atcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-ttt 181  Q
    ||||||||  |||||||| ||||| ||||||   |||||| || || ||||||||||||||| |||| |||| || ||||  ||||||| ||||||   |    
T  23560049 caacggtctccatttaaaaaaaaagatcaaacaattaaaaataaaagatttaataagatctatggtggaccacctataaagttggttcatcttagacaat 23559950  T
Q  182 ttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    | | ||||||||||||| |||| ||||||||| ||||||  ||||||| |||||||| |||||||||||||    
T  23559949 taaggttaaaaactaacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacac 23559879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 7483254 - 7483328
Alignment:
Q  58 taaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatt 132  Q
    ||||||| ||||||||| |||| |||||||||||||| |||||  |||||||||||||| |||||||| ||||||    
T  7483254 taaagtataatagaccccacatgattcaacggtcctcttttaacaaaaaaatcaaatggataaaattaaaaaatt 7483328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 252
Target Start/End: Complemental strand, 19622183 - 19622065
Alignment:
Q  135 ataagatctacggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagagatgaccaaaatggtaaacagcagaagattta 233  Q
    ||||| ||||||||| |||| ||||||| || |||||||||| |  ||| ||||| ||||||||| |||| |||||||   ||||| |||||||||||||    
T  19622183 ataaggtctacggtggaccacctttaaacatagttcaccttaaacatttgatgttgaaaactaacggagaggaccaaaccagtaaatagcagaagattta 19622084  T
Q  234 tgggaccaaattgagacac 252  Q
    || ||| ||||||||||||    
T  19622083 tgagactaaattgagacac 19622065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 26798896 - 26798961
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||||||||| |||| |||||||||||||||| |  ||||| |||||||||||||||||||||    
T  26798896 gttaaaaactaacggagaggaccaaaatggtaaacggaggaagaattatgggaccaaattgagaca 26798961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 47855331 - 47855394
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| |||| ||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  47855331 aaaaaataacggagaggaccaaaatagtaaacggcagaagatttataggaccaaattgagacac 47855394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 49334330 - 49334392
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||||||||||||||||| |||||| |||||| | ||||||||||| |||||| |||||||||    
T  49334330 aaaaactaacagagatgatcaaaatagtaaacggtagaagatttatcggaccatattgagaca 49334392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 25585826 - 25585887
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagac 250  Q
    |||||||||| |||||||| ||||| ||||||  ||||||||||||| ||||||||||||||    
T  25585826 aaaaactaacggagatgactaaaatagtaaacgacagaagatttatgagaccaaattgagac 25585887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 2124148 - 2124096
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaatt 245  Q
    |||||| |||||||||||||| |||||| ||| ||||||||||||||||||||    
T  2124148 actaacggagatgaccaaaatagtaaacggcataagatttatgggaccaaatt 2124096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 29537135 - 29537191
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaatt 245  Q
    |||||||||| |||| ||||||||| |||||| |||||||||||||||||| |||||    
T  29537135 aaaaactaacggagaggaccaaaattgtaaacggcagaagatttatgggacgaaatt 29537191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 29536837 - 29536774
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| ||||| |||| ||||||||| ||||||   |||||||||||||||||||||||||||||    
T  29536837 aaaagctaacggagaggaccaaaatagtaaacgaaagaagatttatgggaccaaattgagacac 29536774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 196
Target Start/End: Complemental strand, 31638354 - 31638234
Alignment:
Q  76 acataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcacctt 175  Q
    |||| ||||||| ||| || ||||||||||||||||||    |||||||| |||||||| ||||   || |||  |||| ||||||||||||||||||||    
T  31638354 acatgattcaactgtcttcttttaaagaaaaaatcaaag---taaaattaaaaaatttagtaaggcgtatggtagaccacctttaaatatggttcacctt 31638258  T
Q  176 agat---ttttatgttaaaaacta 196  Q
    ||||   ||| |||||||||||||    
T  31638257 agatatatttgatgttaaaaacta 31638234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 42633883 - 42633942
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||| |||||||||  |||||  || |||||||||||||||||||||||||||    
T  42633883 actaacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacac 42633942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 47806936 - 47806878
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||| |||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  47806936 actaacggagaggaccaaaatg-taaacagcagaagatttataggatcaaattgagacac 47806878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 51825618 - 51825677
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| || ||||||||||| ||||||  ||||||||||||||||||||||||| ||||    
T  51825618 actaacggatatgaccaaaatagtaaacgacagaagatttatgggaccaaattgaaacac 51825677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 19253011 - 19253057
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||    
T  19253011 gaccaaaatggtaaacggcagaatatttatgggatcaaattgagaca 19253057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 43345442 - 43345384
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattga 247  Q
    |||||||||| ||||  |||||||||||||||   ||||||||||||||||||||||||    
T  43345442 aaaaactaacggagaaaaccaaaatggtaaacgagagaagatttatgggaccaaattga 43345384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 43346361 - 43346503
Alignment:
Q  111 aaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacagagatgacca 209  Q
    ||||||||||||||| |||||||| |||| |||| |||| |||| || |||   |||| |||||||||  |||| | ||||||||  ||  | |||||||    
T  43346361 aaatggttaaaattaaaaaatttagtaaggtctatggtggaccacctataatgttggtccaccttagacatttagggttaaaaacagacgaaaatgacca 43346460  T
Q  210 aaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||||  ||||||| ||||| ||||||||||| ||||    
T  43346461 aaatgataaacgacagaagagttatgagaccaaattgacacac 43346503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 54653964 - 54654022
Alignment:
Q  194 ctaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| ||||||||| ||||||  ||||||| ||||||||||||||||||||||    
T  54653964 ctaacggagaggaccaaaatagtaaacgacagaagaattatgggaccaaattgagacac 54654022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 35174350 - 35174427
Alignment:
Q  165 tggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggacca 241  Q
    |||||||||||||| ||||| | ||||||| ||||||| ||||||||||| ||||||   |||||| |||||||||||    
T  35174350 tggttcaccttagacttttaaggttaaaaattaacagaaatgaccaaaatagtaaacgatagaagagttatgggacca 35174427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 51400343 - 51400275
Alignment:
Q  184 atgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||| ||| || | ||||||||||||| || || ||| ||||||||||| ||||||||||||    
T  51400343 atgttaaaaacaaacggaaaggaccaaaatggtatacggctgaaaatttatgggactaaattgagacac 51400275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 51401371 - 51401407
Alignment:
Q  216 taaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||||||||||||||||||||||||||||||    
T  51401371 taaacggcagaagatttatgggaccaaattgagacac 51401407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 8372609 - 8372672
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| ||| |||||||||| |||||| |  |  |||||||||||||||||||||||||    
T  8372609 aaaaactaacggaggtgaccaaaatagtaaactgttgtggatttatgggaccaaattgagacac 8372672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 11220667 - 11220714
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||| ||||||  |||||||||||| |||||||||||||||||    
T  11220667 gaccaaaatagtaaacgacagaagatttataggaccaaattgagacac 11220714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 49122011 - 49122058
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||||| |||||| | ||||| ||||||||||||||||    
T  49122011 gaccaaaatggtaaacggcagaaaacttatgagaccaaattgagacac 49122058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 252
Target Start/End: Complemental strand, 49333200 - 49333043
Alignment:
Q  94 catttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatgtt-aaaa 192  Q
    |||||||| ||||||||||| |||||||| || || ||| |||||| |||| |||| |||| |  ||||  || |||||||||||  |||| | | ||||    
T  49333200 catttaaa-aaaaaatcaaacggttaaaaataaaagatt-aataaggtctatggtggaccacccataaagttgattcaccttagacgtttaaggtgaaaa 49333103  T
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||||| ||| ||||||||||| ||| ||| ||||| |||||| || ||||||    
T  49333102 actaaccgagatggccagaatggtaaacaacagtagagttatgagaccaagttaagacac 49333043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 10987652 - 10987709
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||| |||||||||   |||| ||| || ||||||||||||||||||||||||    
T  10987652 taacagagaggaccaaaataaaaaacggcataaaatttatgggaccaaattgagacac 10987709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 47808105 - 47808162
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||| ||||||||| | ||||  ||||||||||||| ||||||||||||||||    
T  47808105 taacggagaggaccaaaatagcaaacgacagaagatttatgagaccaaattgagacac 47808162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 17345433 - 17345374
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgaga 249  Q
    |||||||||| |||| |||||||| ||||| ||| |||||||||| || ||||||||||||    
T  17345433 aaaaactaacggagaggaccaaaaaggtaa-cagaagaagatttaaggaaccaaattgaga 17345374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 43102006 - 43101954
Alignment:
Q  200 gagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||| |||||| |||| |  ||||||| ||||||||||||||||||||||    
T  43102006 gagatgatcaaaatagtaagcgacagaagaattatgggaccaaattgagacac 43101954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 2e-82; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 7 - 252
Target Start/End: Original strand, 26055957 - 26056203
Alignment:
Q  7 gagatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaa 106  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||| |    
T  26055957 gagaagaagatgaagaaaatgataaaagttttaggtgttagtggttcacaggaaagtacaatagaccctacataattcaacggtcctcttttaaagaata 26056056  T
Q  107 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatg 205  Q
    ||||||||||||||||||| ||||||||||| |  ||| ||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||||| |||| |    
T  26056057 aatcaaatggttaaaattaaaaaatttaatacggcctatggtgaaccacctttaaatatggttcactttagacttttgatgttaaaatctaacggagagg 26056156  T
Q  206 accaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||| ||||||  || |||||||||||||||||||||||||||    
T  26056157 accaaaatagtaaacgacaaaagatttatgggaccaaattgagacac 26056203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 12 - 212
Target Start/End: Complemental strand, 50678663 - 50678463
Alignment:
Q  12 gaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatca 111  Q
    ||||||||||||| ||| |||| |||||||||||||| ||||||||||||||||||||||||| |  ||||||||| |||||| ||||||||||||||||    
T  50678663 gaagatgaagaaagtgaaaaaaatattaggtgttagtcgttcacagtaaagtacaatagaccctatgtaattcaacagtcctcttttaaagaaaaaatca 50678564  T
Q  112 aatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaa 210  Q
    |||||||||||||| ||||||||||| | |||| ||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||    
T  50678563 aatggttaaaatta-aaaatttaatacggtctatggtgaaccacctttaaatatggttcaccttagagttttgatgttaaaaactaacagagaggaccaa 50678465  T
Q  211 aa 212  Q
    ||    
T  50678464 aa 50678463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 210
Target Start/End: Original strand, 51218803 - 51218980
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaa-aaatcaaatggttaaaattagaaaattt 133  Q
    |||||||||| |||||||||||| |||||||||||||||| |||| ||||||| |||||| ||||| |||| |||||||||| ||||||||| |||||||    
T  51218803 tattaggtgtgagtggttcacaggaaagtacaatagaccccacatgattcaacagtcctcttttaatgaaataaatcaaatgattaaaattaaaaaattt 51218902  T
Q  134 aataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaa 210  Q
    ||||||   || |||| |||||||||||||||||||||| |||||  ||| ||||||||||||||| |||| ||||||    
T  51218903 aataaggcatatggtggaccatctttaaatatggttcactttagacatttgatgttaaaaactaacggagaggaccaa 51218980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 30 - 212
Target Start/End: Original strand, 30551422 - 30551605
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| |||||||||||||||||||||| |||| |||||||||||| |||| || ||||  ||||| |||||||||||||||||| ||||||||||| |||    
T  30551422 aaaaatattaggtgttagtggttcacactaaaatacaatagaccctacatgatccaacaatcctcttttaaagaaaaaatcaaaaggttaaaattaaaaa 30551521  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa 212  Q
    ||||| |||| || | |||| |||| |||| |||||||||||| |||||  ||| ||| ||||||||||| |||||||||||||    
T  30551522 atttactaaggtccatggtgcaccaccttttaatatggttcactttagacatttgatgctaaaaactaacggagatgaccaaaa 30551605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 30 - 212
Target Start/End: Original strand, 37624403 - 37624586
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| |||||||||||||||||||||| |||| |||||||||||| |||| |||||||  ||||| |||||||||||||||||| ||||||||||| |||    
T  37624403 aaaaatattaggtgttagtggttcacactaaaatacaatagaccctacatgattcaacaatcctcttttaaagaaaaaatcaaaaggttaaaattaaaaa 37624502  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa 212  Q
    ||||| |||| || | |||| || | |||| |||||||||||| |||||  ||| ||||||||||||||| |||| ||||||||    
T  37624503 atttactaaggtccatggtgcacaaccttttaatatggttcactttagacatttgatgttaaaaactaacggagaggaccaaaa 37624586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 14764505 - 14764296
Alignment:
Q  37 ttaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaat 136  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| |||     |  |||||||||||||||||||||||||||| | |||||||| |    
T  14764505 ttaggtgttagtggttcacagtaaagtgcaatagaccctacatgatttaacaactattttttaaagaaaaaatcaaatggttaaaataaaaaaatttagt 14764406  T
Q  137 aagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatg 235  Q
    | |   || |||| |||| ||||||||| ||||||||||| |  |||| ||||||||||||||||||||||| ||||  ||||||  ||||||| |||||    
T  14764405 atggcgtatggtggaccacctttaaataaggttcaccttaaacatttaatgttaaaaactaacagagatgactaaaacagtaaacgacagaagacttatg 14764306  T
Q  236 ggaccaaatt 245  Q
     |||||||||    
T  14764305 agaccaaatt 14764296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 9634082 - 9633835
Alignment:
Q  7 gagatgaagatgaagaaaa-tgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaa 105  Q
    |||| |||||||||||||| |||  ||| |||||  |||||||  |||||| |||| ||||| |||||| ||||||| ||||  || || | ||||||||    
T  9634082 gagaagaagatgaagaaaagtgaggaaaatattaaatgttagttattcacactaaaatacaaaagaccctacataatccaactatcttcttctaaagaaa 9633983  T
Q  106 aaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagat 204  Q
    |||||||| ||| ||||||  ||||||||||||| |||| |||| |||| ||||||| |||||||||||||||  ||| ||||||||||||||| ||||     
T  9633982 aaatcaaagggtcaaaatttaaaaatttaataaggtctatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagag 9633883  T
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    || |||||  |||||| |  ||||||||||   |||||||||||||||    
T  9633882 gatcaaaactgtaaacggttgaagatttatataaccaaattgagacac 9633835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 212
Target Start/End: Original strand, 23081959 - 23082142
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||  |||| || ||||  ||| | |||||| |||||||||||  |||||||||| |||    
T  23081959 aaaagtattaggtgttagtggtttacactaaaatacaatagaccttacattatccaacaatccacttttaaaaaaaaaatcaaaatgttaaaattaaaaa 23082058  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttagat-ttttatgttaaaaactaacagagatgaccaaaa 212  Q
    ||||| |||| || | |||| |||| ||||||||||||||||| |||||| |||  |||||||||||||| || | ||||||||    
T  23082059 atttattaaggtccatggtggaccacctttaaatatggttcactttagatatttggtgttaaaaactaacggaaaggaccaaaa 23082142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 212
Target Start/End: Complemental strand, 27689570 - 27689383
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| |||||||||||||||||||||| |||| |||||||||||| |||| || ||||  |  || |||||||||||||||||| ||||||||||| |||    
T  27689570 aaaaatattaggtgttagtggttcacactaaaatacaatagaccctacatgatccaacaattatcttttaaagaaaaaatcaaaaggttaaaattaaaaa 27689471  T
Q  130 at----ttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacagagatgaccaaaa 212  Q
    |     |||||||| || | | || |||| ||||||||||||||||| |||||  |||  |||||||||||||| |||| ||||||||    
T  27689470 aaaaaattaataaggtccatgatggaccacctttaaatatggttcactttagacatttggtgttaaaaactaacggagaggaccaaaa 27689383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 52742785 - 52742989
Alignment:
Q  7 gagatgaagatgaagaaaa-tgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaa 105  Q
    |||| |||||||||||||  ||| |||| |||||||||| ||||||| |||||||| ||||||||| ||    | || ||||  | ||| ||||||||||    
T  52742785 gagaagaagatgaagaaaggtgagaaaaatattaggtgtcagtggtttacagtaaaatacaatagatcctttgtgatccaacaattctcttttaaagaaa 52742884  T
Q  106 aaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagat 204  Q
    |||||||| ||||||||||  ||||| |||| || |||| |||| |||| ||||||| ||||||||||||| |  ||| ||||||||||||||| ||||     
T  52742885 aaatcaaaaggttaaaatttaaaaatgtaattaggtctatggtgtaccacctttaaacatggttcaccttaaacatttgatgttaaaaactaacggagag 52742984  T
Q  205 gacca 209  Q
    |||||    
T  52742985 gacca 52742989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 252
Target Start/End: Original strand, 49141434 - 49141552
Alignment:
Q  135 ataagatctacggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagagatgaccaaaatggtaaacagcagaagattta 233  Q
    ||||| |||| |||| | || |||||||||||||||||||||||  ||| ||||||||||||||| |||||||| |||||||||||| |||||| | |||    
T  49141434 ataaggtctatggtggaacaactttaaatatggttcaccttagacatttgatgttaaaaactaacggagatgactaaaatggtaaacggcagaaaaatta 49141533  T
Q  234 tgggaccaaattgagacac 252  Q
    ||||||||| |||| ||||    
T  49141534 tgggaccaatttgaaacac 49141552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 44977407 - 44977322
Alignment:
Q  127 aaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaa 211  Q
    ||||||||||||| | ||||||| |||| |||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  44977407 aaaatttaataaggtttacggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacagagatgaccaaa 44977322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 13641380 - 13641317
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  13641380 aaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacac 13641317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 36511325 - 36511387
Alignment:
Q  190 aaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  36511325 aaaactaacggagatgaccaaaatagtaaacgacagaagatttatgggaccaaattgagacac 36511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 249
Target Start/End: Complemental strand, 21277177 - 21277057
Alignment:
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatgtt-aaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| |||| |||| |||| || ||||  ||||||||||||||  |||| | | |||||||||  |||| || |||||| |||||| |||||||    
T  21277177 atttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggtcaaaaactaatggagaggatcaaaatagtaaacggcagaag 21277078  T
Q  229 atttatgggaccaaattgaga 249  Q
    |||||||||||||||||||||    
T  21277077 atttatgggaccaaattgaga 21277057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 14169767 - 14169680
Alignment:
Q  165 tggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||||||||||  |||| | ||||||||||||||| | ||||||||| ||||||  || ||||||||||||||||||||||||||    
T  14169767 tggttcaccttagacatttaaggttaaaaactaacagataagaccaaaatagtaaacgacaaaagatttatgggaccaaattgagaca 14169680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 252
Target Start/End: Complemental strand, 22167993 - 22167839
Alignment:
Q  94 catttaaagaaaaa-atcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatgttaaaa 192  Q
    |||||||| ||||| ||||||  ||||||| || || |||||||||| |||| |||| ||||||| ||||  | ||||||| |     || | |||||||    
T  22167993 catttaaaaaaaaagatcaaaccgttaaaaataaaagatttaataaggtctatggtggaccatctataaagtttgttcaccat-----ttaaggttaaaa 22167899  T
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||  ||||||||  ||||| |||||||||||||||||||||||||| ||||    
T  22167898 actaacagagagaaccaaaataataaacggcagaagatttatgggaccaaattgaaacac 22167839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 51726777 - 51726900
Alignment:
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| |||| |||| |||| || ||||  ||||||||||||||  |||| | |||||||||||| | || ||| ||||| ||||||  ||||||    
T  51726777 atttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaactaacggtgaggactaaaatagtaaacgacagaag 51726876  T
Q  229 atttatgggaccaaattgagacac 252  Q
    |||||||| |||||||||||||||    
T  51726877 atttatggaaccaaattgagacac 51726900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 212
Target Start/End: Original strand, 22766726 - 22766836
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagat-ttttatgttaaaaactaacaga 201  Q
    ||||||||||| ||||||||||| ||||||||  ||| || | |||| |||| ||||||||||||||||| |||||| |||  |||||||||||||| ||    
T  22766726 aaaaaatcaaaaggttaaaattaaaaaatttatgaaggtccatggtggaccacctttaaatatggttcactttagatatttggtgttaaaaactaacgga 22766825  T
Q  202 gatgaccaaaa 212  Q
     | ||||||||    
T  22766826 aaggaccaaaa 22766836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 49139924 - 49139861
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| ||||| |||||||| |||||| || ||||||||||| ||||||||||||||||    
T  49139924 aaaaactaacggagattaccaaaatagtaaactgcggaagatttatgagaccaaattgagacac 49139861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 3979311 - 3979369
Alignment:
Q  194 ctaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| ||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  3979311 ctaacggagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacac 3979369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 14071193 - 14071259
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||| ||| || | ||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  14071193 gttaaaaacaaacggaaaggaccaaaatggtaaacgacagaagacttatgggaccaaattgagacac 14071259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 19466195 - 19466261
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||| ||||  |||| ||| ||||||  ||||||||||||||||||||||||||||||    
T  19466195 gttaaaaactaacggagagaaccacaatagtaaacgacagaagatttatgggaccaaattgagacac 19466261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 36509937 - 36509871
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||| ||||  |||||||| |||||| ||||||||||||||| |||||||||| ||||    
T  36509937 gttaaaaactaacggagagaaccaaaatagtaaacggcagaagatttatggaaccaaattgaaacac 36509871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 40811321 - 40811256
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||||||||| ||||||||||||||  ||||| ||| |||| |||||||| ||||||||||||    
T  40811321 gttaaaaactaacggagatgaccaaaataataaacggcaaaagagttatgggatcaaattgagaca 40811256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 14390379 - 14390319
Alignment:
Q  191 aaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||||||| |||| ||||||||||||||||   ||||||||||||| ||||||||||||||    
T  14390379 aaactaacggagaggaccaaaatggtaaacgaaagaagatttatggaaccaaattgagaca 14390319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 25786087 - 25786028
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||| |||||||||  |||||  || |||||||||||||||||||||||||||    
T  25786087 actaacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacac 25786028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 47411103 - 47411044
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||||||||||||| ||||||  || |||||||||| ||||||||||||||||    
T  47411103 actaacggagatgaccaaaatagtaaacgacataagatttatgagaccaaattgagacac 47411044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 13930665 - 13930731
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||| ||| || | ||||||||||||||||  || |||| ||||||||||||||||||||||    
T  13930665 gttaaaaacaaacggaaaggaccaaaatggtaaacgacataagacttatgggaccaaattgagacac 13930731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 24517584 - 24517670
Alignment:
Q  167 gttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||  |||| | ||||||||||||||| | ||||| | | ||||||||  ||||||||||||||||||||||| ||||    
T  24517584 gttcaccttagacatttaagattaaaaactaacagaaaggaccacattagtaaacagaggaagatttatgggaccaaattgacacac 24517670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 19464721 - 19464660
Alignment:
Q  191 aaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||  |||||||||||||| |||||| ||||||||||| ||| |||||||||| ||||    
T  19464721 aaactaatggagatgaccaaaatagtaaacggcagaagatttgtggaaccaaattgaaacac 19464660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 52181304 - 52181361
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||||||||||||| ||||||| || |||||||||| ||| ||||||||||||    
T  52181304 taacggagatgaccaaaatagtaaacaacataagatttatgagactaaattgagacac 52181361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 8092782 - 8092658
Alignment:
Q  129 aatttaataagatctacggtgaaccatctttaaatatggttcaccttagat-ttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaa 227  Q
    ||||||||||| |||| |||| |||| || ||||  ||||||||||||||| ||| | |||||| |||||| || | |||||||   |||||| |  |||    
T  8092782 aatttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaaggaccaaatcagtaaacggaggaa 8092683  T
Q  228 gatttatgggaccaaattgagacac 252  Q
    ||||||||| |||||||||| ||||    
T  8092682 gatttatggaaccaaattgatacac 8092658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 16218475 - 16218531
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgaga 249  Q
    |||||| ||||||||||||||  |||||  || ||||||||||||||||||||||||    
T  16218475 actaacggagatgaccaaaatattaaacgacataagatttatgggaccaaattgaga 16218531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 47411460 - 47411504
Alignment:
Q  208 caaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||||| ||| |||||||||||||||||||||||||||    
T  47411460 caaaatagtaaacggcataagatttatgggaccaaattgagacac 47411504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 16217559 - 16217500
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||||||||||||| |||||   || ||||||||| |||||||||||||||||    
T  16217559 actaacggagatgaccaaaatagtaaatgacataagatttataggaccaaattgagacac 16217500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 25787161 - 25787220
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||| ||||||||| |||||  ||| |||||||||| ||||||||||||||||    
T  25787161 actaacggagaggaccaaaatagtaaatggcataagatttatgagaccaaattgagacac 25787220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 47136684 - 47136743
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||| ||||||||| |||||| ||| ||||||||||  |||||||||||||||    
T  47136684 actaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacac 47136743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 14478486 - 14478420
Alignment:
Q  96 tttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaa 162  Q
    |||||| ||||||||||| |||| ||||||||| | |||||| |||||| |||| ||||| ||||||    
T  14478486 tttaaaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaa 14478420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 3978161 - 3978104
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||| ||||||||| ||||||  ||||||| |||||||| |||||||||||||    
T  3978161 taacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacac 3978104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 14765085 - 14765150
Alignment:
Q  187 ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||||| |||| |||| |||| |||||| ||| || ||||||||||||||||||| ||||    
T  14765085 ttaaatactaacggagaggaccgaaatagtaaactgcaaaaaatttatgggaccaaattgacacac 14765150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 40109486 - 40109421
Alignment:
Q  187 ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||| | ||||| | | |||||| |  ||||||||||||||||||||||| ||||    
T  40109486 ttaaaaactaacagaaaggaccacattagtaaacggatgaagatttatgggaccaaattgacacac 40109421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 12 - 251
Target Start/End: Complemental strand, 21387937 - 21387698
Alignment:
Q  12 gaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatca 111  Q
    ||||||||||||  ||| |||| |||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  21387937 gaagatgaagaacgtgaaaaaa-tattaggtgttagtcgtttacagtaaagtacaatagaccctacataattcaacggtcctcttttaaagaaaaaatca 21387839  T
Q  112 aatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaa 210  Q
    |||||||||||||| ||||||||||| |  ||| ||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||| | ||||||    
T  21387838 aatggttaaaattaaaaaatttaatacggcctatggtgaaccacctttaaatatgtttcaccttagagttttgatgttaaaaactaacagacaggaccaa 21387739  T
Q  211 aatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||  |  ||| ||||||||||||||||||||||||||||||    
T  21387738 aagaggtaacggcagaagatttatgggaccaaattgagaca 21387698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 251
Target Start/End: Complemental strand, 18693999 - 18693759
Alignment:
Q  12 gaagatgaagaaaatgataaaagtattaggtgttagtggttcaca--gtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaat 109  Q
    ||||||||||||| ||| |||| ||||||||||| || |||||||  ||||||||||||||||   ||||||||||||||||||| |||||||||||| |    
T  18693999 gaagatgaagaaagtgaaaaaa-tattaggtgttggtcgttcacacagtaaagtacaatagactatacataattcaacggtcctcttttaaagaaaaa-t 18693902  T
Q  110 caaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgacc 208  Q
    |||||| ||||||||| ||||||||||| | |||| ||||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||    
T  18693901 caaatgattaaaattaaaaaatttaatacggtctatggtgaaccacctttatatatggttcaccttagagttttgatgttaaaaactaacagagaggacc 18693802  T
Q  209 aaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||  |  |||  ||||||||||||||||||| |||||||||    
T  18693801 aaaagaggtaacgacagaagatttatgggaccagattgagaca 18693759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 2167421 - 2167570
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacaga 201  Q
    ||||||||||| |||||| | || || |||||||||| |||| |||| ||||||| ||||  ||||||||||||||  ||| | ||||||||||||||||    
T  2167421 aaaaaatcaaacggttaataataaaagatttaataaggtctatggtggaccatctataaagttggttcaccttagacatttaaggttaaaaactaacaga 2167520  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    || |||||||||  ||||| |||||||||||||||||||||||||| ||||    
T  2167521 ga-gaccaaaataataaacggcagaagatttatgggaccaaattgaaacac 2167570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 178
Target Start/End: Complemental strand, 7426924 - 7426776
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| ||||||||| | || ||| ||| |||| |||| ||||||| |||| || ||||   |||| |||||||||||||||||| |||| |||||  |||    
T  7426924 aaaaatattaggtgatggtagtttacaataaaatacagtagaccctacatcatccaacaaacctcttttaaagaaaaaatcaaaaggttgaaatttaaaa 7426825  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttaga 178  Q
    |||||||||| |||| |||| |||| ||||||||||| |||||||||||    
T  7426824 atttaataaggtctatggtggaccacctttaaatatgattcaccttaga 7426776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 252
Target Start/End: Complemental strand, 32734360 - 32734191
Alignment:
Q  84 caacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt 183  Q
    ||||||||  ||||| || |||| ||||||  ||||||| || || |||||||||| |||| |||| || |||| | ||  | ||||||||||||| |||    
T  32734360 caacggtctccattttaaaaaaatatcaaactgttaaaaataaaagatttaataaggtctatggtggactatctattaaggttgttcaccttagatattt 32734261  T
Q  184 atg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    | | |||||||||||| || ||||||||||| ||||||  ||||||| ||||||||||||||| ||||||    
T  32734260 aagattaaaaactaacggaaatgaccaaaatagtaaacgacagaagagttatgggaccaaattaagacac 32734191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 252
Target Start/End: Complemental strand, 40058235 - 40058078
Alignment:
Q  96 tttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaac 194  Q
    |||||| |||| ||||||  ||||||| || || |||||||||| |||| |||| || |  | ||||  ||||||||||||||  |||| | ||||||||    
T  40058235 tttaaaaaaaagatcaaacagttaaaaataaaagatttaataaggtctatggtggactacttataaagttggttcaccttagacatttaagattaaaaac 40058136  T
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| ||||||||||||||||||||| |||||||| ||||| |||||| |||| ||||    
T  40058135 taacggagatgaccaaaatggtaaacggcagaagagttatgagaccaatttgaaacac 40058078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 42510240 - 42510174
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||| ||||  |||||||| |||||| |||||||||||||||||||||||||||||||    
T  42510240 gttaaaaactaacggagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacac 42510174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 243
Target Start/End: Original strand, 22819424 - 22819564
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||| |||||| ||||||||||| ||||| || |||||||||  ||| |||| || | |   ||||||||||||||| | || | |||||||||||| ||    
T  22819424 aaaagatcaaagggttaaaatta-aaaatctattaagatctatagtggaccacctatcatgttggttcaccttagatatatagggttaaaaactaacgga 22819522  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaa 243  Q
    |||||||||||| |||||| |||||||| |||||||||||||    
T  22819523 gatgaccaaaatagtaaacggcagaagagttatgggaccaaa 22819564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 12830906 - 12830994
Alignment:
Q  165 tggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||| |||| | ||||||| |||| |||| ||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  12830906 tggttcacctaagatatttagggttaaaaattaacggagaggaccaaaatagtaaacagcagaagagttataggaccaaattgagacac 12830994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 12862886 - 12862974
Alignment:
Q  165 tggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||| |||| | ||||||| |||| |||| ||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  12862886 tggttcacctaagatatttagggttaaaaattaacggagaggaccaaaatagtaaacagcagaagagttataggaccaaattgagacac 12862974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 1273212 - 1273150
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||||||||| |||  ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  1273212 aaaaactaacggaggggaccaaaattgtaaactgcagaagatttatgggaccaaattgagaca 1273150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 15614955 - 15615016
Alignment:
Q  191 aaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||| ||||||||| |||||| |||||| |||||||| |||||||||||||||    
T  15614955 aaactaacagagaggaccaaaatagtaaacggcagaaaatttatggaaccaaattgagacac 15615016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 252
Target Start/End: Original strand, 19525175 - 19525344
Alignment:
Q  84 caacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt 183  Q
    ||||||||  |||||||| |||| ||||||  ||||||| ||    |||||||||| |||| |||| ||||  | ||||  ||||||||| ||||  |||    
T  19525175 caacggtctccatttaaaaaaaagatcaaacagttaaaaatatgtgatttaataaggtctatggtggaccacatataaagttggttcaccatagaaattt 19525274  T
Q  184 atg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    | | |||||||| ||| |||| |||||||||||||||| |||||||| ||||| |||||||| |||||||    
T  19525275 aaggttaaaaacaaacggagaggaccaaaatggtaaacggcagaagacttatgtgaccaaatggagacac 19525344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 7345350 - 7345446
Alignment:
Q  157 tttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||  |  |||  || || ||||||||||||||||||||||||    
T  7345350 tttaaatatggttcaccttagagttttgatgttaaaaactatcatagaggaccaaaagagataacgacaaaatatttatgggaccaaattgagacac 7345446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 19827148 - 19827196
Alignment:
Q  204 tgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  19827148 tgaccaaaatggtaaacggaagaagatttatgggaccaaattgagacac 19827196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 5383125 - 5383002
Alignment:
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| |||| |||| |||| || ||||  || |||||||||||  |||| | |||||||||||| |||| || |||||| ||||||  |  |||    
T  5383125 atttaataaggtctatggtggaccacctataaagttgattcaccttagacatttaaggttaaaaactaacggagaggatcaaaatagtaaacgaccaaag 5383026  T
Q  229 atttatgggaccaaattgagacac 252  Q
    ||||||||||||||||||||||||    
T  5383025 atttatgggaccaaattgagacac 5383002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 5384339 - 5384402
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||| ||||||||| |||||| |  ||||||||||||||||||||||||||||    
T  5384339 aaaaactaacggagaggaccaaaatagtaaacggacgaagatttatgggaccaaattgagacac 5384402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 10085842 - 10085901
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||| ||||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  10085842 actaacggagaggaccaaaatagtaaatagcagaagatttatgggaccaaattgaaacac 10085901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 12936095 - 12936158
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| ||| || |||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  12936095 aaaaacaaacggaaatgaccaaaatggtaaacagcataagacttattggaccaaattgagacac 12936158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 15613628 - 15613565
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| |||| ||||||||| |||||| | |||||||||||||||||||||||||||||    
T  15613628 aaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacac 15613565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 15857611 - 15857674
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||||||||||||||||||||  || ||||||||||||| |||||||| ||||    
T  15857611 aaaaactaacggagatgaccaaaatggtaaacgacataagatttatgggaacaaattgaaacac 15857674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 32735476 - 32735528
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaatt 245  Q
    |||||||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  32735476 actaacagagatgaccaaaataataaacggcagaagagttatgggaccaaatt 32735528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 12950253 - 12950316
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| ||| || ||||||||||||||||||| || |||| |||| |||||||||||||||||    
T  12950253 aaaaacaaacggaaatgaccaaaatggtaaacatcataagacttattggaccaaattgagacac 12950316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 18678083 - 18678036
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||||    
T  18678083 gaccaaaacggtaaacgacagaagatttatgggaccaaattgagacac 18678036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 22819558 - 22819605
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  22819558 gaccaaaatagtaaacggcagaagagttatgggaccaaattgagacac 22819605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 38473548 - 38473611
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| || ||||||||||| ||||||  ||||||||||||||||||||||| ||||||    
T  38473548 aaaaattaacggaaatgaccaaaatagtaaacgacagaagatttatgggaccaaattaagacac 38473611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 15856743 - 15856609
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||| |||||||| ||||||||| |||| ||| |||| |||| |||| |||| || |||   |||| |||||||||  |||| | |||||||| |||  |    
T  15856743 aaaatatcaaatgattaaaattaaaaaacttagtaaggtctatggtggaccacctataatgttggtccaccttagacatttagggttaaaaacaaacgaa 15856644  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgg 236  Q
     |||||||||||||||||| |||||||| ||||||    
T  15856643 aatgaccaaaatggtaaacggcagaagagttatgg 15856609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 22812380 - 22812442
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||||||||| |||  ||||||||| |||||| ||||||||||||||||| |||| |||||||    
T  22812380 aaaaactaacggaggggaccaaaatagtaaactgcagaagatttatgggatcaaagtgagaca 22812442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 1663304 - 1663247
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||| ||||||||| |||||| ||||||||||||| |||||||||| ||||||    
T  1663304 taacggagaagaccaaaatagtaaacggcagaagatttataggaccaaattaagacac 1663247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 38471415 - 38471354
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattga 247  Q
    |||||||| |||||||||  |||||||| |||||| | ||||||||||||| ||||||||||    
T  38471415 gttaaaaattaacagagagaaccaaaatagtaaacggaagaagatttatggaaccaaattga 38471354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 326451 - 326404
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||||| |||||||||||||  |||||||||||||||    
T  326451 gaccaaaatgataaacaacagaagatttatgcaaccaaattgagacac 326404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 5975879 - 5975816
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||||  |||| ||| ||||||||  ||||| ||||| ||||||||||||||||    
T  5975879 aaaaactaacagagagaaccacaatagtaaacagaggaagacttatgagaccaaattgagacac 5975816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 18695640 - 18695703
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||||||||| | | |||||| |  ||||| ||||||||||||||||||||||    
T  18695640 aaaaactaacggagatgaccatattagtaaacggatgaagacttatgggaccaaattgagacac 18695703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 42980718 - 42980765
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||||  ||||||||| |||| ||||||||||||||||    
T  42980718 gaccaaaatggtaaatggcagaagatatatgagaccaaattgagacac 42980765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 42979560 - 42979508
Alignment:
Q  200 gagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| ||||||||| |||||| |||||||| |||| |||||||||||| ||||    
T  42979560 gagaggaccaaaatagtaaacggcagaagaattattggaccaaattgaaacac 42979508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 98 - 252
Target Start/End: Original strand, 9379 - 9534
Alignment:
Q  98 taaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaacta 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9379 taaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttttatgttaaaaacta 9478  T
Q  197 acagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    || ||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  9479 acggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacac 9534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 8502 - 8440
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||||||||| ||||||||| |||| |||||   | |||||||||||||||||| ||||||||    
T  8502 aaaaactaacggagatgaccgaaatagtaaatgactgaagatttatgggaccaatttgagaca 8440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 25 - 252
Target Start/End: Original strand, 39729 - 39957
Alignment:
Q  25 atgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaatt 124  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||||||||||||||||||||||||||||    
T  39729 atgagaaaaatattagatgttagtggttcacagtaaagtacaatagaccctacataattcaatggtcatcttttaaagaaaaaatcaaatggttaaaatt 39828  T
Q  125 agaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa-tggtaaacag 222  Q
    | ||||||||||| | || | ||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||||| ||||||||  |||||   |    
T  39829 aaaaaatttaatacggtccatggtgaaccacctttaaatatgattcaccttagacttttgatgttaaaaactaacagagaggaccaaaagaggtaatgtg 39928  T
Q  223 cagaagatttatgggaccaaattgagacac 252  Q
      ||||||||||||||||||||||||||||    
T  39929 -ggaagatttatgggaccaaattgagacac 39957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 22250 - 22188
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||| |||| |||||||||||||| ||||||  ||||||||||||| || ||||||||||||    
T  22250 aaaaattaacggagatgaccaaaatagtaaacgacagaagatttatgtgaacaaattgagaca 22188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 37276038 - 37276299
Alignment:
Q  9 gatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacat-----------------aattcaacggtc 91  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||   ||||                 ||||||| ||||    
T  37276038 gatgaagatgaagaaagtgagaaaaatattaggtgttagtggttcacagtaaagtacaatagactttacataacaatagactttacataattcaaaggtc 37276137  T
Q  92 ctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaa 190  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||| | ||||  |||||||| ||||||||||||||||||||||| |||| |||||||    
T  37276138 ctcttttaaagaaaaaatcaaatggttaaaattaaaaaatttaatatggtctatagtgaaccacctttaaatatggttcaccttagacttttgatgttaa 37276237  T
Q  191 aaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||| |||||| ||  ||||| ||| |||||||||||||||||||||||||||    
T  37276238 aaactaacagagaggaccaatataataaacggcaaaagatttatgggaccaaattgagacac 37276299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 36756348 - 36756124
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaat-agacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaa 128  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||| |||| || ||||| | ||| |||||||||||||| ||| ||||||||||  ||    
T  36756348 aaaaatattaggtgttagtggttcacagtaaaatacaattagaccctacatgatccaacgattctcttttaaagaaaaaattaaagggttaaaatttaaa 36756249  T
Q  129 aatttaataagatctacggtgaaccatctttaaatatggttcaccttag-atttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaa 227  Q
    |||||||||||   || ||||||||| ||||||||||| |||||||||| | ||| ||||||||||||||| |||||||||||||| ||||||  || ||    
T  36756248 aatttaataaggcttatggtgaaccacctttaaatatgattcaccttagaaatttgatgttaaaaactaacggagatgaccaaaatagtaaacgacataa 36756149  T
Q  228 gatttatgggaccaaattgagacac 252  Q
    |||||||| ||||| ||||| ||||    
T  36756148 gatttatgtgaccagattgaaacac 36756124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 7486383 - 7486142
Alignment:
Q  7 gagatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaa 106  Q
    |||| ||||||||||||  ||| |||| ||||||||||| |||||| ||| |||| ||||||||| |  | || ||  |||  ||||| |||||||||||    
T  7486383 gagaagaagatgaagaaggtgagaaaaatattaggtgttggtggtttacaataaaatacaatagatcttatatgatctaacaatcctcttttaaagaaaa 7486284  T
Q  107 aatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagagatg 205  Q
    ||||||| || |||||||  ||||||||||||| |||| |||| || |  |||||| ||||||||| |||||  ||| ||||||||||||||| |||| |    
T  7486283 aatcaaaaggctaaaatttaaaaatttaataaggtctatggtggacaacatttaaacatggttcactttagacatttgatgttaaaaactaacggagagg 7486184  T
Q  206 accaaaatggtaaacagcagaagatttatgggaccaaattga 247  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  7486183 accaaaatagtaaacagcaaaagatttatgggaccaaattga 7486142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 250
Target Start/End: Complemental strand, 13513698 - 13513482
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaattta 134  Q
    |||| ||||| ||||||||||||||||||||||||||||  |||| |||||||||||||  |||||||||||||||||||||||||||||| |||| |||    
T  13513698 tatttggtgtgagtggttcacagtaaagtacaatagacctcacatgattcaacggtcctattttaaagaaaaaatcaaatggttaaaattaaaaaaatta 13513599  T
Q  135 ataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagattta 233  Q
    ||||| | || |||| ||||  ||||||||||||||| |||| |  ||| ||||||||| ||||| |||| ||||||||  |  ||||| ||||||  ||    
T  13513598 ataaggtatatggtggaccacttttaaatatggttcatcttatacatttgatgttaaaagctaacggagaggaccaaaagaggtaacagaagaagacata 13513499  T
Q  234 tgggaccaaattgagac 250  Q
     |||||||| |||||||    
T  13513498 agggaccaatttgagac 13513482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 250
Target Start/End: Complemental strand, 13603231 - 13603015
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaattta 134  Q
    |||| ||||| ||||||||||||||||||||||||||||  |||| |||||||||||||  |||||||||||||||||||||||||||||| |||| |||    
T  13603231 tatttggtgtgagtggttcacagtaaagtacaatagacctcacatgattcaacggtcctattttaaagaaaaaatcaaatggttaaaattaaaaaaatta 13603132  T
Q  135 ataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagattta 233  Q
    ||||| | || |||| ||||  ||||||||||||||| |||| |  ||| ||||||||| ||||| |||| ||||||||  |  ||||| ||||||  ||    
T  13603131 ataaggtatatggtggaccacttttaaatatggttcatcttatacatttgatgttaaaagctaacggagaggaccaaaagaggtaacagaagaagacata 13603032  T
Q  234 tgggaccaaattgagac 250  Q
     |||||||| |||||||    
T  13603031 agggaccaatttgagac 13603015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 21670342 - 21670164
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaattta 134  Q
    |||||||||| | || |||||| ||||||| ||||||||| |||| |||||||||||||| ||||||||||||| |||||||||||||||| |||| |||    
T  21670342 tattaggtgtgaatgattcacactaaagtataatagaccccacatgattcaacggtcctcttttaaagaaaaaaccaaatggttaaaattaaaaaaatta 21670243  T
Q  135 ataagatctacggtgaaccatctttaaatatggttcaccttagat-ttttatgttaaaaactaacagagatgaccaaaa 212  Q
    |||||   || |||| ||||  ||| ||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||    
T  21670242 ataaggcatatggtggaccactttttaatatggttcaccttagatatttgatgttaaaaactaacggagaagaccaaaa 21670164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 212
Target Start/End: Complemental strand, 10052405 - 10052204
Alignment:
Q  12 gaagatgaagaaaa-tgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatc 110  Q
    |||||||||||||| ||| ||||  |||||||| ||||||||||||||||| |||||||||||| |||| || ||||  || || |||||||||||||||    
T  10052405 gaagatgaagaaaagtgagaaaaa-attaggtggtagtggttcacagtaaaatacaatagaccctacatgatccaacaatcatcttttaaagaaaaaatc 10052307  T
Q  111 aaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgacca 209  Q
    ||| |||||||| |  ||||||||||||| | || |||| |||| |||||||||||||||| ||||||  ||| ||||||||||||||  ||||||||||    
T  10052306 aaagggttaaaacttaaaaatttaataaggtttatggtggaccacctttaaatatggttcatcttagacatttaatgttaaaaactaaaggagatgacca 10052207  T
Q  210 aaa 212  Q
    |||    
T  10052206 aaa 10052204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 252
Target Start/End: Original strand, 39546516 - 39546733
Alignment:
Q  36 attaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaa 135  Q
    |||||||||| ||||||||| ||||| ||||||||| || |||| || ||||  ||||| |||||| ||||||||||| |||||||||||     ||||     
T  39546516 attaggtgtttgtggttcacggtaaaatacaatagatcccacatgatccaacaatcctcttttaaaaaaaaaatcaaagggttaaaattaatttttttac 39546615  T
Q  136 taagatctacggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttat 234  Q
    |||| || | |||| |||| ||||||| |||||||| |||| |  ||| ||||||||||||||| ||||||||||||| ||||||| ||| || ||||||    
T  39546616 taaggtccatggtggaccacctttaaacatggttcatcttaaacatttgatgttaaaaactaacggagatgaccaaaacggtaaacggcataatatttat 39546715  T
Q  235 gggaccaaattgagacac 252  Q
    ||||||||||||||||||    
T  39546716 gggaccaaattgagacac 39546733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 44103132 - 44103312
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaag-aaaaaatcaaatggttaaaatt-agaaaatt 132  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||| ||||||||||| || ||||| | |||||||||||||||||||||| | |||| |    
T  44103132 tattaggtgtgagtggttcacaataaagtacaatagaccccacatgattcaacggtcttcttttaatgaaaaaaatcaaatggttaaaattaaaaaaaat 44103231  T
Q  133 taataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa 212  Q
    |||||||   || |||| |||| ||||||| |||||||||||||||  ||| ||||||||||||||| |||| ||||||||    
T  44103232 taataaggcatatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaggaccaaaa 44103312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 212
Target Start/End: Original strand, 13363411 - 13363594
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| ||||||||||||||||||||||  ||| |||||||||||| |||| || ||||  ||||| |||||||||||||| ||| ||||||||||| |||    
T  13363411 aaaaatattaggtgttagtggttcacacaaaaatacaatagaccctacatgatccaacaatcctcttttaaagaaaaaattaaaaggttaaaattaaaaa 13363510  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa 212  Q
    ||||| |||| || | |||| |||| ||||||||||||||||| |||||  |||  |||||||||||||| |||| ||||||||    
T  13363511 atttactaaggtccatggtgcaccacctttaaatatggttcactttagacatttggtgttaaaaactaacggagaggaccaaaa 13363594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 212
Target Start/End: Complemental strand, 21962094 - 21961923
Alignment:
Q  42 tgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagat 141  Q
    ||||||||||||||||||||||||||||||| | || | |||||| |||| |  |||||||||||||||||||||||||||||| |||||||| ||||      
T  21962094 tgttagtggttcacagtaaagtacaatagactcaacttgattcaatggtcttgttttaaagaaaaaatcaaatggttaaaattaaaaaatttagtaaggc 21961995  T
Q  142 ctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa 212  Q
     || |||| |||| ||||||| ||||||||||| |||  ||| ||||||||||||||| |||| ||||||||    
T  21961994 atatggtggaccacctttaaacatggttcacctaagacatttgatgttaaaaactaacggagaggaccaaaa 21961923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 45541783 - 45541603
Alignment:
Q  9 gatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaa 108  Q
    |||||||||||||||| ||| |||| |||||| | ||||||||| ||||||||||||||||||||| ||||||||||| ||   ||||||||| ||||||    
T  45541783 gatgaagatgaagaaagtgagaaaaatattagatattagtggtttacagtaaagtacaatagaccctacataattcaatgg---tcatttaaa-aaaaaa 45541688  T
Q  109 tcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaa 193  Q
    |||||| |||||||||| |||||||||||   || | ||||||||| ||||||||||| ||||| ||||| |||| ||||||||||    
T  45541687 tcaaattgttaaaattaaaaaatttaatacattccatggtgaacca-ctttaaatatgattcactttagacttttgatgttaaaaa 45541603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 251
Target Start/End: Complemental strand, 35944127 - 35943969
Alignment:
Q  94 catttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttat-gttaaaa 192  Q
    ||||||||  ||| ||||||  ||||||| || || ||||||||||||||| |||| | || || ||||  ||||||||||||||  ||||  |||||||    
T  35944127 catttaaaataaagatcaaacagttaaaaataaaagatttaataagatctatggtggatcacctataaagttggttcaccttagacatttaaagttaaaa 35944028  T
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||||    
T  35944027 actaacggagatgaccaaaatagtaaactgcataagatttatgggaccaaattgagaca 35943969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 252
Target Start/End: Original strand, 2421189 - 2421349
Alignment:
Q  94 catttaaagaaaaa-atcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaa 191  Q
    |||||||||||||| |||||| |||||||| || || |||||||||| |||| | || ||||||| ||||  ||||||||||||||  |||| | |||||    
T  2421189 catttaaagaaaaagatcaaacggttaaaaataaaagatttaataaggtctatgatggaccatctataaagttggttcaccttagacatttaaggttaaa 2421288  T
Q  192 aactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||| ||| |||||||||  ||||| ||||||||||| |||||||||||||| ||||    
T  2421289 aactaacaaagaggaccaaaataataaacggcagaagatttctgggaccaaattgaaacac 2421349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 146 - 243
Target Start/End: Complemental strand, 36938848 - 36938750
Alignment:
Q  146 ggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaa 243  Q
    ||||||||| ||||||||||||||||| |||||| ||| |||||||||| ||||||||| ||||||||| |||||| |||||||||||||| |||||||    
T  36938848 ggtgaaccacctttaaatatggttcactttagatatttgatgttaaaaattaacagagaagaccaaaatagtaaacggcagaagatttatgagaccaaa 36938750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 103 - 245
Target Start/End: Original strand, 13366956 - 13367099
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||| |||||| |||||||| || ||  ||||||||| |||| |||| |||| || ||||  ||||||||||||||  |||| | |||||||||||| ||    
T  13366956 aaaatatcaaacggttaaaaataaaaggtttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaactaacgga 13367055  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaatt 245  Q
    || ||||||||| |||||| ||||||||||||||||||||||||    
T  13367056 gaggaccaaaatagtaaacggcagaagatttatgggaccaaatt 13367099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 247
Target Start/End: Complemental strand, 117318 - 117113
Alignment:
Q  42 tgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagat 141  Q
    |||| |||||| ||| |||| ||||||||| || | || || ||||  ||||| || ||||||||||||||| || |||||||  |||||||| |||| |    
T  117318 tgttggtggtttacaataaaatacaatagatcctatatgatccaacaatcctctttcaaagaaaaaatcaaaaggctaaaattt-aaaatttagtaaggt 117220  T
Q  142 ctacggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggacc 240  Q
    ||| |||| |||| ||||||| |||  ||||||||||  ||| ||||||||||||||| |||| ||||||||   |||||  |||||||||||||||| |    
T  117219 ctatggtggaccacctttaaacatgactcaccttagacatttgatgttaaaaactaacggagaggaccaaaacaataaacgacagaagatttatgggatc 117120  T
Q  241 aaattga 247  Q
    |||||||    
T  117119 aaattga 117113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 24069352 - 24069502
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacaga 201  Q
    |||| |||||||||||||||||| |||| ||| |||| |||| |||| |||| || |||   |||| |||||||||  |||| ||||||||||  || ||    
T  24069352 aaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggtggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacgga 24069451  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     | |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24069452 aaggaccaaaatggtaaacggcagaagagttatgggaccaaattgagacac 24069502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 252
Target Start/End: Complemental strand, 19913720 - 19913552
Alignment:
Q  84 caacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt 183  Q
    ||||||||  |||||||| |||| |||||||||||||||  |    |||||||||  |||| |||| ||||||| ||||  ||||||||||||||  |||    
T  19913720 caacggtctccatttaaa-aaaatatcaaatggttaaaaacatgtgatttaataaagtctatggtggaccatctataaagttggttcaccttagaaattt 19913622  T
Q  184 atg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    | | |||||||||||| |||| |||||||||| ||||| |||||||| ||||||||||||||||| ||||    
T  19913621 aaggttaaaaactaacggagaggaccaaaatgataaaccgcagaagacttatgggaccaaattgaaacac 19913552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 16363719 - 16363865
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttat-gttaaaaactaacaga 201  Q
    ||||||||||||||||| |||||||||  || || || ||||||||| ||||  | ||||  ||||||||||||||  ||||  ||||| ||||||| ||    
T  16363719 aaaaaatcaaatggttagaattagaaagatttatgaggtctacggtggaccag-tgtaaagttggttcaccttagacatttaaagttaataactaacgga 16363817  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgaga 249  Q
    || ||||||||| |||||||||||| ||||||||||| ||||||||||    
T  16363818 gaggaccaaaatagtaaacagcagacgatttatgggatcaaattgaga 16363865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 39325671 - 39325850
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaag-aaaaaatcaaatggttaaaattagaaaattt 133  Q
    |||||||||||| |||||||||||||||||||||||  |  |||| || |||| |   || ||||||| ||||||||||||||||||||||| |||||||    
T  39325671 tattaggtgttaatggttcacagtaaagtacaataggtcgtacatgatccaactgcattcttttaaagaaaaaaatcaaatggttaaaattaaaaaattt 39325770  T
Q  134 aataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa 212  Q
    | ||||   || | |  |||| ||||||| || ||||||||||||  ||| ||||||||||||| |||||||||| ||||    
T  39325771 agtaaggcatatgatagaccacctttaaacatagttcaccttagacatttgatgttaaaaactagcagagatgactaaaa 39325850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 252
Target Start/End: Complemental strand, 44606358 - 44606199
Alignment:
Q  94 catttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaa 192  Q
    |||||||| |||| |||||| |||||||| || || |||||| ||| |||| |||| |||| || ||||  ||||||||||||||  |||| | ||||||    
T  44606358 catttaaaaaaaagatcaaacggttaaaaataaaagatttaacaaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaa 44606259  T
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||  |||| || ||||||  ||||||| |||||||||||||||||||||||| ||||    
T  44606258 actaatggagaggatcaaaataataaacagaagaagatttatgggaccaaattgaaacac 44606199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 36070361 - 36070238
Alignment:
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatgttaaaa-actaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| |||| |||| |||| || ||||  ||||||||||||||  |||| | | ||| |||||| | || ||||||||| |||||| |||||||    
T  36070361 atttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggtcaaagactaacggggaggaccaaaatagtaaacggcagaag 36070262  T
Q  229 atttatgggaccaaattgagacac 252  Q
    |||||||||| |||||||||||||    
T  36070261 atttatgggatcaaattgagacac 36070238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 37275010 - 37274947
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||| ||||||||| |||||| ||||||||||||||||| |||||||||||||    
T  37275010 aaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaacaaattgagacac 37274947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 8095556 - 8095406
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||||||||||||||||||  || || |||||||||| | || |||| | || || ||||  ||||||||||||||  |||| | |||||||||||| ||    
T  8095556 aaaaaatcaaatggttaaagatacaagatttaataaggtatatggtgcatcacctataaagttggttcaccttagacatttaagattaaaaactaacgga 8095457  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     | ||||||||| ||||||  || |||| | ||||||||||||||||||||    
T  8095456 aaggaccaaaatagtaaacgacaaaagagtaatgggaccaaattgagacac 8095406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 34617101 - 34617251
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacaga 201  Q
    |||| |||||||||||||||||| |||||||| |||| ||||||||| |||| || |||   |||| ||||||| |  ||||  |||||||||| || ||    
T  34617101 aaaatatcaaatggttaaaattaaaaaatttagtaaggtctacggtggaccacctgtaatgttggtccaccttatacatttagggttaaaaactgacgga 34617200  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     |||||||||||| ||||| | ||||||  |||||||| ||||||| ||||    
T  34617201 aatgaccaaaatgataaacggaagaagagctatgggactaaattgacacac 34617251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 252
Target Start/End: Complemental strand, 20308834 - 20308665
Alignment:
Q  84 caacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt 183  Q
    ||||||||  |||||||| |||| ||||||   |||||| || || |||||||||| |||| || | || |||| ||||  ||||||||||||||  |||    
T  20308834 caacggtctccatttaaaaaaaagatcaaaccattaaaaataaaagatttaataaggtctatggcggactatctataaagttggttcaccttagacattt 20308735  T
Q  184 atg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    | | ||||||| |||  || ||||||||||| ||||||  ||||||| ||||| ||||||||||||||||    
T  20308734 aaggttaaaaattaatggaaatgaccaaaatagtaaacgacagaagagttatgagaccaaattgagacac 20308665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 252
Target Start/End: Complemental strand, 21095467 - 21095298
Alignment:
Q  84 caacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt 183  Q
    ||||||||  |||||||| |||| ||||||   |||||| || || |||||||||| |||| || | || |||| ||||  ||||||||||||||  |||    
T  21095467 caacggtctccatttaaaaaaaagatcaaaccattaaaaataaaagatttaataaggtctatggcggactatctataaagttggttcaccttagacattt 21095368  T
Q  184 atg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    | | ||||||| |||  || ||||||||||| ||||||  ||||||| ||||| ||||||||||||||||    
T  21095367 aaggttaaaaattaatggaaatgaccaaaatagtaaacgacagaagagttatgagaccaaattgagacac 21095298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 29739636 - 29739699
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| ||| || |||||||||||||||||| | |||| ||||||||||||||||||||||||    
T  29739636 aaaaacaaacggacatgaccaaaatggtaaacggaagaaaatttatgggaccaaattgagacac 29739699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 8395121 - 8395064
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaa 243  Q
    ||||||||||||| |||| |||||||||||||||| | |||||| |||||||||||||    
T  8395121 gttaaaaactaacggagaggaccaaaatggtaaacggaagaagaattatgggaccaaa 8395064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 21267342 - 21267233
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagat-ttttatgttaaaaactaacaga 201  Q
    ||||||||||| ||||||||||  |||||||||| || | || |||| |||| ||| ||  ||||| |||||||||| ||| ||||||||||||||| ||    
T  21267342 aaaaaatcaaaaggttaaaatttaaaaatttaattaggtatatggtggaccaccttgaatcatggtccaccttagatatttgatgttaaaaactaacgga 21267243  T
Q  202 gatgaccaaa 211  Q
    || |||||||    
T  21267242 gaggaccaaa 21267233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 31625383 - 31625440
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||| ||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  31625383 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacac 31625440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 38591011 - 38591063
Alignment:
Q  200 gagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| ||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  38591011 gagaggaccaaaatagtaaacggcataagatttatgggaccaaattgagacac 38591063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 36071374 - 36071429
Alignment:
Q  192 aactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattga 247  Q
    ||||||||||||||||||||||| ||||| | |||||| |||||||||||| ||||    
T  36071374 aactaacagagatgaccaaaatgataaacggtagaagagttatgggaccaatttga 36071429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 36940026 - 36940089
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| |||||||||||||| |||||| ||||||||||||||  |||||||||| ||||    
T  36940026 aaaaattaacggagatgaccaaaatagtaaacggcagaagatttatgataccaaattgaaacac 36940089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 3237536 - 3237478
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||||| || |||| |||||| |||||| |||||| |||||||||||||||||||||||    
T  3237536 actaacggaaatgatcaaaattgtaaacggcagaatatttatgggaccaaattgagaca 3237478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 7796714 - 7796863
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacaga 201  Q
    |||| |||||||||||||||||| |||| ||| |||| |||| || | |||| || |||   |||| |||||||||  |||| ||||||||||  ||  |    
T  7796714 aaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggaggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacgaa 7796813  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     |||||||||||| ||| | |||||||| ||||| ||||||||||||||||    
T  7796814 aatgaccaaaatgataa-cggcagaagagttatgagaccaaattgagacac 7796863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 7815995 - 7816144
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacaga 201  Q
    |||| |||||||||||||||||| |||| ||| |||| |||| || | |||| || |||   |||| |||||||||  |||| ||||||||||  ||  |    
T  7815995 aaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggaggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacgaa 7816094  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     |||||||||||| ||| | |||||||| ||||| ||||||||||||||||    
T  7816095 aatgaccaaaatgataa-cggcagaagaattatgagaccaaattgagacac 7816144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 29738417 - 29738351
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||| ||| |||| |||||||| ||||||| |||||||| ||||| ||| ||||||||||||    
T  29738417 gttaaaaacaaacggagaggaccaaaaaggtaaacggcagaagacttatgagactaaattgagacac 29738351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 39515409 - 39515259
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacaga 201  Q
    |||| |||||||||||||||||| |||| ||| |||| |||| | || |||| || |||   |||| |||||||||  |||| |||||||||   || ||    
T  39515409 aaaatatcaaatggttaaaattataaaacttagtaaggtctatgatggaccacctataatgttggtccaccttagacatttagtgttaaaaatagacgga 39515310  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     |||||||||| ||||||  ||| |||| ||||| ||||||||||||||||    
T  39515309 aatgaccaaaaaggtaaatggcaaaagagttatgagaccaaattgagacac 39515259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 19914913 - 19914962
Alignment:
Q  203 atgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||||||| | ||||||||||||||  |||||||||||||    
T  19914913 atgaccaaaatggtaaacggtagaagatttatgggtacaaattgagacac 19914962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 22620019 - 22619955
Alignment:
Q  188 taaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||| | ||||| | | ||||||||  ||||||||||||||||||||||| ||||    
T  22620019 taaaaactaacagaaaagaccacattagtaaacagaggaagatttatgggaccaaattgacacac 22619955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 27750618 - 27750674
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgaga 249  Q
    |||||| |||| ||||||||| |||||||  | ||||||||||||||||||||||||    
T  27750618 actaacggagaagaccaaaatagtaaacaatataagatttatgggaccaaattgaga 27750674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 43277928 - 43277976
Alignment:
Q  203 atgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||||||||    
T  43277928 atgaccaaaatagtaaacggcataagatttacgggaccaaattgagaca 43277976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 24068453 - 24068390
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||| ||||||| | |||||| |  ||||| ||||||||||||||||||||||    
T  24068453 aaaaactaacggagaggaccaaattagtaaacggaggaagacttatgggaccaaattgagacac 24068390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 31871521 - 31871462
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaatt 245  Q
    |||||||||||||||| | |||||||||  |||||  ||||||||| |||||||||||||    
T  31871521 gttaaaaactaacagaaaggaccaaaataataaacgacagaagattcatgggaccaaatt 31871462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 37472510 - 37472463
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||||  || |||| ||||||||||||||||||||||    
T  37472510 gaccaaaatggtaaacgacaaaagacttatgggaccaaattgagacac 37472463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 41867013 - 41866954
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||||||||| |||||  ||  || ||||||||||||||||||| ||||    
T  41867013 actaacagagatgaccaaaatagtaaatggcgtaaaatttatgggaccaaattgaaacac 41866954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 9854775 - 9854833
Alignment:
Q  96 tttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaacca 154  Q
    |||||| |||||||||||||||| ||||||||| | |||||| |||||| |||| ||||    
T  9854775 tttaaaaaaaaaatcaaatggtttaaattagaagaattaataggatctatggtggacca 9854833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 35945446 - 35945492
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||||| |||||| ||||||||| |||||||||||| |||||||    
T  35945446 gaccaaaatagtaaactgcagaagatatatgggaccaaagtgagaca 35945492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 39220805 - 39220739
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||||||| || ||||| |||||| |||||||| ||| || | |||||||| ||||    
T  39220805 gttaaaaactaacagagataacgaaaatagtaaacggcagaagacttaaggaatcaaattgaaacac 39220739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 36734570 - 36734602
Alignment:
Q  222 gcagaagatttatgggaccaaattgagacacat 254  Q
    |||||| ||||||||||||||||||||||||||    
T  36734570 gcagaaaatttatgggaccaaattgagacacat 36734602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 38696545 - 38696470
Alignment:
Q  81 attcaacggtcctcatt--taaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaacca 154  Q
    |||||||||||||| ||  |||  ||||||||||| ||||||||||| |||| ||||| ||||||| |||| ||||    
T  38696545 attcaacggtcctctttcttaacaaaaaaatcaaagggttaaaattataaaaattaattagatctatggtggacca 38696470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 34084045 - 34084154
Alignment:
Q  8 agatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34084045 agatgaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagaccctacataattcaacggtcctcatttaaagaaaaa 34084144  T
Q  108 atcaaatggt 117  Q
    ||||||||||    
T  34084145 atcaaatggt 34084154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 18139337 - 18139543
Alignment:
Q  48 tggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatc-aaatggttaaaattagaaaatttaataagatctacg 146  Q
    |||||||||||||| |||||||||||| |||| || ||||  ||||| ||||||||||||||| ||| ||||||||||  ||||||||||||  |||| |    
T  18139337 tggttcacagtaaaatacaatagaccctacatgatccaacaatcctcttttaaagaaaaaatcaaaaaggttaaaatttaaaaatttaataatgtctatg 18139436  T
Q  147 gtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaatt 245  Q
    ||| | |||||||||| |||||||||||||||  ||| ||||||||||||||  |||| ||||||||   ||||| ||||||||| || |||||||| ||    
T  18139437 gtggatcatctttaaacatggttcaccttagacatttgatgttaaaaactaatggagaggaccaaaacaataaacggcagaagatataagggaccaattt 18139536  T
Q  246 gagacac 252  Q
    |||||||    
T  18139537 gagacac 18139543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 252
Target Start/End: Original strand, 33801826 - 33802073
Alignment:
Q  7 gagatgaagatgaagaaaa-tgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaa 105  Q
    |||| |||||||||||||  ||| |||| ||| | ||||| |||||| | | ||||  ||||||||||| |||| || ||||  ||||| ||||||||||    
T  33801826 gagaagaagatgaagaaaggtgaaaaaaatatcaagtgttggtggtttataataaaaaacaatagaccctacatgatccaacaatcctcttttaaagaaa 33801925  T
Q  106 aaa-tcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagaga 203  Q
    ||| ||||| | ||||||||  ||||||||||||| | || |||| |||| ||| ||  |||||  ||||||||| ||| ||||||||||||||| ||||    
T  33801926 aaaatcaaaag-ttaaaatttaaaaatttaataaggtatatggtggaccaccttgaatcatggtctaccttagatatttgatgttaaaaactaacggaga 33802024  T
Q  204 tgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     |||||| | |||||||  |||||||||||||||| |||||| ||||||    
T  33802025 ggaccaatacggtaaactacagaagatttatgggatcaaattaagacac 33802073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 252
Target Start/End: Complemental strand, 31738580 - 31738423
Alignment:
Q  96 tttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaac 194  Q
    |||||| |||| ||||||||||||||| |     ||||||||| ||||| |||| ||| ||| ||||  |||||||| |||||  |||| | ||||||||    
T  31738580 tttaaaaaaaatatcaaatggttaaaaatttgtgatttaataaaatctatggtggaccgtctataaagttggttcacattagacatttaaggttaaaaac 31738481  T
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||| |||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  31738480 taacggagaggaccaaaatggtaaaccgcagaagacttatgggaccaaattgaaacac 31738423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 22299896 - 22299959
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  22299896 aaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacac 22299959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 252
Target Start/End: Original strand, 293538 - 293696
Alignment:
Q  94 catttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaa 192  Q
    |||||||| |||| ||||||||||||||| ||    |||||||||| |||| |||| |||| || ||||  ||||||||||||||  |||| | ||||||    
T  293538 catttaaa-aaaagatcaaatggttaaaaatatgttatttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaa 293636  T
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |  ||| |||| ||||||||||||||||  ||||||| ||||| ||||||||||| ||||    
T  293637 ataaacggagaggaccaaaatggtaaacgacagaagacttatgagaccaaattgaaacac 293696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 251
Target Start/End: Original strand, 27440071 - 27440230
Alignment:
Q  93 tcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttat-gttaaa 191  Q
    |||||| || |||| |||||| ||||||||||| ||||||||||||  | || |||  |||| ||  |||  |  |||||||||||  ||||  ||||||    
T  27440071 tcattttaaaaaaagatcaaacggttaaaattaaaaaatttaataaagtttatggtagaccacctacaaagttaattcaccttagacatttaaagttaaa 27440170  T
Q  192 aactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    || |||| |||| ||||||||| |||||| | ||||||||||||||||||||||||||||    
T  27440171 aattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagaca 27440230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 2130993 - 2130877
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagat-ttttatgttaaaaactaacaga 201  Q
    ||||||||||||||||| |||||||||  || || ||||||| ||||||||| || ||||  ||||||||||||||| ||| | |||||| |||||  ||    
T  2130993 aaaaaatcaaatggttagaattagaaagatttatgagatctatggtgaaccacctataaaggtggttcaccttagatatttaaggttaaatactaaggga 2130894  T
Q  202 gatgaccaaaatggtaa 218  Q
    || ||||||||| ||||    
T  2130893 gaggaccaaaatagtaa 2130877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 8412313 - 8412372
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||| ||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  8412313 actaacggagaggaccaaaatagtaaacggcacaagatttatgggaccaaattgagacac 8412372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 31740281 - 31740328
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  31740281 gaccaaaatggtaaacggcataagatttatgggaccaaattgagacac 31740328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 207
Target Start/End: Original strand, 13507038 - 13507182
Alignment:
Q  63 tacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaa 162  Q
    |||||| ||||| |||| || ||||  || || |||||||||||||||||| |||||||||||||   |||| |||   | | | || |||| |||||||    
T  13507038 tacaattgaccctacatgatccaacaatcttcttttaaagaaaaaatcaaagggttaaaattagaggttttattaaagcccatg-tggaccacctttaaa 13507136  T
Q  163 tatggttcaccttagattttt-atgttaaaaactaacagagatgac 207  Q
    |||||||||||||| |  ||| ||||||||||||||||||||||||    
T  13507137 tatggttcaccttaaacatttgatgttaaaaactaacagagatgac 13507182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 14328707 - 14328830
Alignment:
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| |||| |||| |||| || ||||  ||||||||||||||  ||| | |||||||| |||| |||| ||||||||| ||||||  || |||    
T  14328707 atttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaagtaacggagaggaccaaaatagtaaacgacaaaag 14328806  T
Q  229 atttatgggaccaaattgagacac 252  Q
    | ||||| ||||||||| ||||||    
T  14328807 aattatgagaccaaattaagacac 14328830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 14421717 - 14421840
Alignment:
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| |||| |||| |||| || ||||  ||||||||||||||  ||| | |||||||| |||| |||| ||||||||| ||||||  || |||    
T  14421717 atttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaagtaacggagaggaccaaaatagtaaacgacaaaag 14421816  T
Q  229 atttatgggaccaaattgagacac 252  Q
    | ||||| ||||||||| ||||||    
T  14421817 aattatgagaccaaattaagacac 14421840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 27438913 - 27438850
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| |||||||||||||  |||||| |||||| |||||||||| |||||||||||||    
T  27438913 aaaaattaacggagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacac 27438850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 7312187 - 7312237
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaacca 154  Q
    |||| ||||||||||| |||||| |||||| |||||||||||||||||||||    
T  7312187 aaaagatcaaatggttgaaattaaaaaatt-aataagatctacggtgaacca 7312237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 33807812 - 33807749
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| |||| |||||||| ||||||| |||||| |||||||| | |||||||||||||    
T  33807812 aaaaattaacggagaggaccaaaacggtaaacggcagaaaatttatggcatcaaattgagacac 33807749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 9927731 - 9927666
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||| |||| |||||||||||||| ||||||    |||| |||||||||||||||||||||||    
T  9927731 gttaaaaattaacggagatgaccaaaatagtaaacgattgaag-tttatgggaccaaattgagacac 9927666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 11723006 - 11722940
Alignment:
Q  96 tttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaa 162  Q
    |||||| ||||||||||| |||| ||||||||| | |||||| |||||| |||| ||||| ||||||    
T  11723006 tttaaaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaa 11722940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 34084148 - 34084190
Alignment:
Q  210 aaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||  ||||||||||||| ||||||||||||||||    
T  34084148 aaatggtaaacgacagaagatttatgagaccaaattgagacac 34084190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 8411203 - 8411146
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||| ||||||||| |||||| ||| |||||||||  ||||||||||||||||    
T  8411203 taacggagaggaccaaaatagtaaacggcataagatttataagaccaaattgagacac 8411146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 16268761 - 16268716
Alignment:
Q  93 tcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataa 138  Q
    ||||| ||||||||||||||| || |||||||| ||||||||||||    
T  16268761 tcattcaaagaaaaaatcaaacggataaaattaaaaaatttaataa 16268716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 37 - 243
Target Start/End: Complemental strand, 41184 - 40977
Alignment:
Q  37 ttaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaat 136  Q
    ||||||||||||||||||||||||||||||||| | || |||| ||||||||||  || |||||| ||||||||||||||||||||| | |||||||| |    
T  41184 ttaggtgttagtggttcacagtaaagtacaataaatcctacatgattcaacggttatcttttaaaaaaaaaatcaaatggttaaaataaaaaaatttagt 41085  T
Q  137 aagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatg 235  Q
    |||   || |||| |||| |||||||||||||||||||||||  ||| ||||||||||||||||||||  || ||||  ||||||  ||||||| |||||    
T  41084 aaggcatatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacagagagaactaaaacagtaaacgacagaagacttatg 40985  T
Q  236 ggaccaaa 243  Q
     |||||||    
T  40984 agaccaaa 40977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 42343 - 42402
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||| |||||||| ||||    
T  42343 actaacagagaggaccaaaatagtaaacgacagaagatttatgggatcaaattgatacac 42402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 251
Target Start/End: Original strand, 13042 - 13259
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaattta 134  Q
    |||||| ||||||||||| ||| ||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||||||||||| |||| ||| ||||    
T  13042 tattagatgttagtggttgacaataaagtacaatagaccctacaaaattcaacagtcctcttttaaagaaaaaatcaaatggttaagattaaaaatttta 13141  T
Q  135 ataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagattta 233  Q
     || | | || |||| ||||||||||||||||||||||||||||  ||| ||||||||| ||||  || | ||||||||  |  ||| | |||||| |||    
T  13142 gtagggtatatggtggaccatctttaaatatggttcaccttagacatttgatgttaaaacctaatggataggaccaaaagaggtaacggaagaagagtta 13241  T
Q  234 tgggaccaaattgagaca 251  Q
    |||||| |||||||||||    
T  13242 tgggacgaaattgagaca 13259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 210
Target Start/End: Original strand, 2293362 - 2293539
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaa-aaatcaaatggttaaaattagaaaattt 133  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| ||||| |||| |||||||||||||||||||| |||||||    
T  2293362 tattaggtgtgagtggttcacagtaaagtacaatagaccccacatgattcaacggtcctcttttaatgaaataaatcaaatggttaaaattaaaaaattt 2293461  T
Q  134 aataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaa 210  Q
    ||||||   || |||| |||||||||||||||| ||||| | |||  ||| || |||||||||||| |||| ||||||    
T  2293462 aataaggcatatggtggaccatctttaaatatgattcacttcagacatttgattttaaaaactaacggagaggaccaa 2293539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 35 - 251
Target Start/End: Complemental strand, 43894383 - 43894166
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaattta 134  Q
    |||||| ||||||||||| ||| ||||||||||||||||| ||| |||||||| | |||| ||||||||||||||||||||||||| |||| ||||||||    
T  43894383 tattagatgttagtggttgacactaaagtacaatagaccctacaaaattcaacagccctcttttaaagaaaaaatcaaatggttaagattaaaaaattta 43894284  T
Q  135 ataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagattta 233  Q
    ||| |   ||  ||| |||||||||||||||||||||||| |||  ||| ||||||||||| ||| || ||||||||||  |  ||||| | || | |||    
T  43894283 atagggcatattgtggaccatctttaaatatggttcacctcagacatttgatgttaaaaaccaacggatatgaccaaaagaggtaacagaaaaatagtta 43894184  T
Q  234 tgggaccaaattgagaca 251  Q
    || |||||||||||||||    
T  43894183 tgtgaccaaattgagaca 43894166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 252
Target Start/End: Original strand, 38418857 - 38419073
Alignment:
Q  37 ttaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaat 136  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||| ||| |   |  |||||||||||||||||||||||||||| | |||||||| |    
T  38418857 ttaggtgttagtggttcatagtaaagtacaatagaccctacatgatttaacagctattttttaaagaaaaaatcaaatggttaaaataaaaaaatttagt 38418956  T
Q  137 aagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatg 235  Q
    |||   || |||| |||| || ||||||||||||| |||| |  ||| ||||||||||||||| |||||||| ||||  |||||| |||||||| |||||    
T  38418957 aaggcatatggtggaccacctataaatatggttcatcttaaacgtttaatgttaaaaactaacggagatgactaaaacagtaaacggcagaagacttatg 38419056  T
Q  236 ggaccaaattgagacac 252  Q
     ||||||||||| ||||    
T  38419057 agaccaaattgacacac 38419073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 44303011 - 44302780
Alignment:
Q  12 gaagatgaagaaaatgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatca 111  Q
    ||||||||||||| ||| |||||||||||||||||||| ||          ||||||| | || ||||||||||||  || || |||||||||  |||||    
T  44303011 gaagatgaagaaagtgagaaaagtattaggtgttagtgatt----------tacaatatatcctacataattcaacaatcatcttttaaagaatcaatca 44302922  T
Q  112 aatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttag-atttttatgttaaaaactaacagagatgaccaa 210  Q
    |||||||||||||| ||||||||||| | |||| ||||||||| |||||||||| |||||||||||  |||| ||||||||||||||| |||| ||||||    
T  44302921 aatggttaaaattaaaaaatttaatacggtctatggtgaaccacctttaaatatagttcaccttagtcttttaatgttaaaaactaacggagaggaccaa 44302822  T
Q  211 aatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||  |  ||  |||||| |||||||||| |||||||||||||    
T  44302821 aagaggtaatggcagaaaatttatgggatcaaattgagacac 44302780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 11094831 - 11094586
Alignment:
Q  7 gagatgaagatgaagaaaa-tgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaa 105  Q
    |||| |||||||||||||  ||| |||| ||||||||||| |||||| ||| |||| |||||||||||  |||| || ||||  ||||| ||||||||||    
T  11094831 gagaagaagatgaagaaaggtgagaaaaatattaggtgttggtggtttacaataaaatacaatagaccttacatgatccaacaatcctcttttaaagaaa 11094732  T
Q  106 aaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagat 204  Q
    |||||| | |||||| |||  ||||||||||||| |||| |||||||||  |||||| |||||  ||||||||  ||| |||||||||||||||  |||     
T  11094731 aaatcacaaggttaatatttaaaaatttaataaggtctatggtgaaccacatttaaacatggt--accttagacatttgatgttaaaaactaacgaagag 11094634  T
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||  |||||| |||||| |||||| |||||||||| ||||||    
T  11094633 gaccaaaacagtaaacggcagaaaatttataggaccaaattaagacac 11094586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 212
Target Start/End: Original strand, 29687817 - 29687994
Alignment:
Q  36 attaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaa 135  Q
    |||||||| |||||||||||| |||| |||||||||||  |||| || ||||  | ||| ||||||||||||||||||||||||||| |  |||||||||    
T  29687817 attaggtggtagtggttcacaataaaatacaatagaccttacatgatccaacaattctcttttaaagaaaaaatcaaatggttaaaacttaaaaatttaa 29687916  T
Q  136 taagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa 212  Q
    |||| | ||||||| |||| ||||||||||||||| || ||||  ||| ||||||||||||||  |||||||||||||    
T  29687917 taaggtttacggtggaccacctttaaatatggttcgccgtagacatttgatgttaaaaactaaaggagatgaccaaaa 29687994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 247
Target Start/End: Complemental strand, 35788079 - 35787861
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| ||||||||||| ||| || ||| |||| | ||||||||||  ||| || ||||  || || ||||| |||||| | ||| ||||||||||  |||    
T  35788079 aaaaatattaggtgttggtgatttacaataaaatgcaatagaccctgcatgatccaacaatcatcttttaatgaaaaatttaaaaggttaaaatttaaaa 35787980  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||  |||| |||| |||| ||||||| ||| || ||||||||  ||| ||||||||||||||| |||| |||||||| |||||||  ||||||    
T  35787979 atttaataaagtctatggtggaccacctttaaacatgatttaccttagacatttgatgttaaaaactaacggagaggaccaaaacggtaaacgacagaag 35787880  T
Q  229 atttatgggaccaaattga 247  Q
    |||||||||||||||||||    
T  35787879 atttatgggaccaaattga 35787861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 36604694 - 36604857
Alignment:
Q  51 ttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaat-ttaataagatctacggtg 149  Q
    |||||||||||||| ||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||||||| ||||  ||||||||   || ||||    
T  36604694 ttcacagtaaagtataatagaccccacatgattcaatggtcctcttttaaagaaaaaatcaaatggttaaaattaaaaaaaattaataaggcatatggtg 36604793  T
Q  150 aaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagagatgaccaaaa 212  Q
      |||  ||| ||||||||||| ||||||| ||| || |||||||||||| |||| ||||||||    
T  36604794 ggccactttttaatatggttcatcttagatatttgatattaaaaactaacggagaggaccaaaa 36604857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 252
Target Start/End: Original strand, 47668413 - 47668653
Alignment:
Q  7 gagatgaagatgaagaaaa-tgataaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaa 105  Q
    |||| |||||||||||||| ||| || | |||||  ||||||||||||||| |||| |||||||||||| |||| ||  |||  ||||| ||||||||||    
T  47668413 gagaagaagatgaagaaaagtgaaaagaatattaaatgttagtggttcacactaaaatacaatagaccctacatgatcgaacaatcctcttttaaagaaa 47668512  T
Q  106 aaa-tcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagaga 203  Q
    ||| ||||| ||||||||||        ||| ||| |||| |||| |||||||||||  |||||| ||||||||| ||| ||||||||||||||||||||    
T  47668513 aaaatcaaaaggttaaaatt--------taaaaaggtctatggtggaccatctttaaccatggtttaccttagatatttgatgttaaaaactaacagaga 47668604  T
Q  204 tgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     ||||||||   ||||| ||||| ||| || |||||||| |||||||||    
T  47668605 ggaccaaaacaataaacggcagatgatataagggaccaatttgagacac 47668653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 252
Target Start/End: Complemental strand, 38370500 - 38370342
Alignment:
Q  96 tttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttag--atttttatgttaaaaa 193  Q
    |||||| |||| |||||| ||||||||||| |  | || |||||||||| |||| |||| ||  |||  |||||||||||||  ||||| | ||||||||    
T  38370500 tttaaaaaaaatatcaaagggttaaaattaaatgaatttataagatctatggtggaccacctacaaagttggttcaccttagtcattttaaggttaaaaa 38370401  T
Q  194 ctaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||||||||||||||||||||  ||||||| ||||| ||||||||||| ||||    
T  38370400 ctaacggagatgaccaaaatggtaaacgacagaagagttatgagaccaaattgatacac 38370342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 249
Target Start/End: Original strand, 6140247 - 6140413
Alignment:
Q  84 caacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt 183  Q
    ||||||||  |||||||| |||| ||||||  ||||||| || || |||||||||| |||| |||| || | || ||||  ||||||||||||||| |||    
T  6140247 caacggtctccatttaaaaaaaagatcaaactgttaaaaataaaagatttaataaggtctatggtggactacctataaagttggttcaccttagatattt 6140346  T
Q  184 atg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgaga 249  Q
    | | |||||||||||| || ||||||||||| ||||||  ||||||| |||||| ||||||||||||    
T  6140347 aaggttaaaaactaacggaaatgaccaaaatagtaaacgacagaagagttatggaaccaaattgaga 6140413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 249
Target Start/End: Complemental strand, 86970 - 86866
Alignment:
Q  146 ggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaat 244  Q
    |||| |||| ||||||| |||||||||||||||  ||| ||||||||||||||| |||| ||||||||  |||||| |||||| ||||||||||||||||    
T  86970 ggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaagaccaaaacagtaaacggcagaatatttatgggaccaaat 86871  T
Q  245 tgaga 249  Q
    |||||    
T  86870 tgaga 86866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 39592123 - 39592345
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| ||||||||||| |||||| ||| |||| || ||||||||  |||| || ||||  ||||| |||| ||||||||||||| ||||||||||  |||    
T  39592123 aaaaatattaggtgttggtggtttacaataaaatataatagacct-acatgatccaacaatcctcttttatagaaaaaatcaaaaggttaaaatttaaaa 39592221  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| | || | || |||| ||||||| |||| ||||||||||  ||| |||||||||| |||| ||||  |||||||  ||||||  ||||||    
T  39592222 atttaataaggtatatgatggaccacctttaaacatggctcaccttagacatttgatgttaaaaattaacggagagaaccaaaacagtaaacgacagaag 39592321  T
Q  229 atttatgggaccaaattgagacac 252  Q
    |  ||  ||||||| |||||||||    
T  39592322 acataatggaccaatttgagacac 39592345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 26393033 - 26393183
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacaga 201  Q
    |||| |||||||||||||||||| |||| ||| |||| |||| |||| |||| || |||   ||||||||||||||  |||| ||||||||||  || ||    
T  26393033 aaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggtggaccacctataatgttggttcaccttagacatttagtgttaaaaacagacgga 26393132  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
      || ||||||||||||||  ||||||| ||||||||||||||||||||||    
T  26393133 agtgtccaaaatggtaaacgacagaagagttatgggaccaaattgagacac 26393183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 34438532 - 34438466
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||||||  |||||||| |||||| |||||||||||||||||||||||||||||||    
T  34438532 gttaaaaactaacagagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacac 34438466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 56000497 - 56000347
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacaga 201  Q
    |||| |||||||||||||||||| |||| ||| |||| ||||||||| |||| || |||   |||| |||||||||  |||| ||||||||||| |  ||    
T  56000497 aaaatatcaaatggttaaaattaaaaaacttagtaaggtctacggtggaccacctataatgttggtccaccttagacatttagtgttaaaaactgatgga 56000398  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     | |||||||||||||||| |||||||| |||| |||| ||||||||||||    
T  56000397 aaagaccaaaatggtaaacggcagaagagttataggactaaattgagacac 56000347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 52980267 - 52980158
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| ||||||||||| |||||| ||| |||| |||||||||| | ||||||| ||||  ||||| |||||||||||||| ||| ||||||||||  |||    
T  52980267 aaaaatattaggtgttggtggtttacaataaaatacaatagactctacataatccaacaatcctcttttaaagaaaaaattaaaaggttaaaatttaaaa 52980168  T
Q  130 atttaataag 139  Q
    ||||||||||    
T  52980167 atttaataag 52980158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 3533514 - 3533664
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacaga 201  Q
    |||| |||||||||||||||||| |||| ||| |||| |||| |||| |||  || |||   ||||  ||||||||  |||| ||||||||||| || ||    
T  3533514 aaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggtggaccgcctataatgttggtcgaccttagacatttagtgttaaaaactgacgga 3533613  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     | |||||||||||||||||| |||||| |||| |||||||||||||||||    
T  3533614 aaggaccaaaatggtaaacagtagaagagttatcggaccaaattgagacac 3533664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 34439654 - 34439711
Alignment:
Q  190 aaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattga 247  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34439654 aaaactaacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattga 34439711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 50530700 - 50530563
Alignment:
Q  116 gttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatg 214  Q
    ||||||| || ||||||||||||| |||| |||| || | || ||||  |||||||||||||| ||||| | ||||||| ||||||| |||||||||||     
T  50530700 gttaaaaataaaaaatttaataaggtctatggtggactacctataaagttggttcaccttagacttttaaggttaaaaattaacagaaatgaccaaaata 50530601  T
Q  215 gtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||   |||||| |||||||||||  |||||||||    
T  50530600 gtaaacgatagaagagttatgggaccattttgagacac 50530563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 11113866 - 11113802
Alignment:
Q  188 taaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||| || |||||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  11113866 taaaaactaacggaaatgaccaaaatggtaaacggcagaagagttatgagaccaaattgagacac 11113802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 33377361 - 33377420
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||| ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  33377361 actaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattgagacac 33377420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 44304972 - 44305035
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| |||||||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  44304972 aaaaattaacggagatgaccaaaatagtaaacagcggaagatttataggaccaaattgagacac 44305035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 5687292 - 5687235
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||||||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  5687292 taacggagatgaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacac 5687235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 252
Target Start/End: Original strand, 6616074 - 6616267
Alignment:
Q  61 agtacaatagacccgacataattcaacggtcctcatttaaagaaa-aaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatcttt 159  Q
    ||||||||||||||  ||| ||  |||  ||||| |||||||||| |||||||| ||||||||||  ||||||||||||| ||||  ||| || ||||||    
T  6616074 agtacaatagaccctgcatgatcgaacaatcctcttttaaagaaataaatcaaaaggttaaaatttaaaaatttaataaggtctatagtggactatcttt 6616173  T
Q  160 aaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||  || ||||||||| ||  ||| ||||||||||||||  |||| ||||||||   |||||  ||||| || || |||||||| |||||||||    
T  6616174 aatcattgttcacctttgacatttgatgttaaaaactaaaggagaggaccaaaacaataaacgacagaatatataagggaccaatttgagacac 6616267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 44159281 - 44159145
Alignment:
Q  116 gttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatg 214  Q
    |||||||||| ||||| || ||||||||| |||| |||| || |||   || |||||||||||| |||| | |||||||||||| ||||||||||||||     
T  44159281 gttaaaatta-aaaatctattaagatctatggtggaccacctataatattgtttcaccttagatatttaggattaaaaactaacggagatgaccaaaata 44159183  T
Q  215 gtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     ||||| |||||||| || ||| |||||||||| ||||    
T  44159182 ataaacggcagaagagttgtggaaccaaattgaaacac 44159145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 27408871 - 27408823
Alignment:
Q  204 tgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  27408871 tgaccaaaatggtaaacggaagaagatttatgggaccaaattgagacac 27408823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 36604586 - 36604646
Alignment:
Q  76 acataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaat 136  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||| |||||    
T  36604586 acatgattcaacggtcctcttttaacgaaaaaatcaaatggttaaaattaaaaaaattaat 36604646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 11114970 - 11115033
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgaga 249  Q
    ||||||||||||| |||| | ||||||||||||||  ||||||| |||||||||||||||||||    
T  11114970 gttaaaaactaacggagaggtccaaaatggtaaacgacagaagagttatgggaccaaattgaga 11115033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 52660204 - 52660263
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaatt 245  Q
    ||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||| ||||    
T  52660204 gttaaaaacaaacagaaatgatcaaaatggtaaacggcagaagatttatgggaccgaatt 52660263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 251
Target Start/End: Complemental strand, 29663852 - 29663703
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacaga 201  Q
    |||| ||||| |||||||||||| |||  ||| |||| | || |||| |||| || |||   ||||||||||||||  |||| ||||||||   ||| ||    
T  29663852 aaaatatcaagtggttaaaattaaaaatcttagtaaggtttatggtggaccacctataatgttggttcaccttagacatttaatgttaaaattaaacgga 29663753  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
     | || ||||||||||||| |||||||| |||||||||||||||||||||    
T  29663752 aaagatcaaaatggtaaacggcagaagagttatgggaccaaattgagaca 29663703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 17319190 - 17319102
Alignment:
Q  165 tggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||||  |||| | |||||||||||| | || ||||||||| ||||||  |||||||||||||| |||||||||| ||||    
T  17319190 tggttcaccttagacatttaaggttaaaaactaacggtgaagaccaaaatagtaaacgccagaagatttatggaaccaaattgaaacac 17319102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 26788641 - 26788585
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgaga 249  Q
    |||||| |||| ||||||||| |||||| |||||||||||||||||| |||||||||    
T  26788641 actaacggagaggaccaaaatagtaaacggcagaagatttatgggacgaaattgaga 26788585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 5688634 - 5688693
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||||||||||||| ||||||  || ||||||||||| |||||||||||||||    
T  5688634 actaacggagatgaccaaaatagtaaacgacataagatttatggaaccaaattgagacac 5688693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 15446663 - 15446726
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||| ||||||||| |||||| | |||| ||||||||||||||||||| ||||    
T  15446663 aaaaactaacggagaggaccaaaatagtaaacggtagaaaatttatgggaccaaattgaaacac 15446726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 28103495 - 28103542
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||    
T  28103495 gaccaaaatggtaaacggcagaagtcttatgggaccaaattgagacac 28103542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 30683016 - 30683083
Alignment:
Q  185 tgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||| |||| ||||||||   | ||| || ||||||||||||||||||||||||||||    
T  30683016 tgttaaaaactaacggagaagaccaaaagaattaacggccgaagatttatgggaccaaattgagacac 30683083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 33376341 - 33376278
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| |||| ||| ||||| ||||||  ||||||||||||||||||||||||||||||    
T  33376341 aaaaattaacggagaggactaaaatagtaaacgacagaagatttatgggaccaaattgagacac 33376278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 43419282 - 43419431
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||| |||||| ||||||||||| ||||| || ||||||||| |||| |||| || |||   |||||||||||| |  |||||| |||||||||||| ||    
T  43419282 aaaagatcaaagggttaaaatta-aaaatctattaagatctatggtggaccacctataatgttggttcaccttatacatttatggttaaaaactaac-ga 43419379  T
Q  202 gat-gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
     || ||||||||| |  ||| |||||||| ||| ||||||||||||||||||    
T  43419380 aatagaccaaaataggtaacggcagaagagttaagggaccaaattgagacac 43419431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 6139116 - 6139058
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||||||||||||||||||||  |||||| || |||| ||||| |||||||||||||||    
T  6139116 actaacagagatgaccaaaataataaacaacataagagttatgagaccaaattgagaca 6139058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 31712477 - 31712562
Alignment:
Q  168 ttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||| |||| | |||||||  ||| || |||||||||||||||||| | |||||| |||||||| |||||||| ||||    
T  31712477 ttcaccttagatatttaaggttaaaaataaacggaaatgaccaaaatggtaaacggaagaagacttatgggatcaaattgaaacac 31712562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 44126717 - 44126664
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattg 246  Q
    ||||||||||| ||||||||| |||||| ||| |||||||| ||||||||||||    
T  44126717 actaacagagaagaccaaaatagtaaacggcataagatttaagggaccaaattg 44126664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 251
Target Start/End: Complemental strand, 56296403 - 56296254
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||| |||||||||||||||||| |||| ||| |||| |||| |||  |||| || | |   |||| |||||||||  |||| | |||||||| ||| ||    
T  56296403 aaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggtagaccacctatgatgttggtccaccttagacatttagggttaaaaacaaacgga 56296304  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
     || |||||||||||||||  || |||| ||||||||||||||| |||||    
T  56296303 aattaccaaaatggtaaacgacaaaagaattatgggaccaaattaagaca 56296254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 15787506 - 15787558
Alignment:
Q  200 gagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||||||||||||||| ||| || | ||||||||||||||||||||||    
T  15787506 gagaggaccaaaatggtaaacggcaaaaaagttatgggaccaaattgagacac 15787558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 27410687 - 27410738
Alignment:
Q  200 gagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  27410687 gagaggaccaaaatggtaaacggaagaagatttat-ggaccaaattgagacac 27410738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 40146616 - 40146679
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||||||||| | | |||| | | |||||| ||||||||||||||||||||||    
T  40146616 aaaaactaacggagatgaccacattagtaatcggaagaagacttatgggaccaaattgagacac 40146679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 46796019 - 46796082
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||| ||||| ||| |||||| |  ||||| ||||||||||||||||||||||    
T  46796019 aaaaactaacggagaggaccacaatagtaaacggaggaagacttatgggaccaaattgagacac 46796082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 48207625 - 48207773
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||| |||||| ||||||||||| |||||||||||| ||||| |||  | |  |||  ||  ||||||||||||||  |||| | ||||||| |||||||    
T  48207625 aaaagatcaaacggttaaaattaaaaaatttaataaaatctatggtagatc--cttataagttggttcaccttagacatttaaggttaaaaaataacaga 48207722  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |  ||||| ||| |||||| | |||||| ||||  ||||||||||||||||    
T  48207723 ggggaccacaattgtaaacggtagaagagttatatgaccaaattgagacac 48207773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 50531753 - 50531812
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||| ||||| ||||| ||||||  || |||| ||||||||||||||||||||||    
T  50531753 actaacagaaatgactaaaatagtaaacgacaaaagagttatgggaccaaattgagacac 50531812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 53400308 - 53400245
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| ||||| |||| ||| ||||||||||||  || ||||||||| |||||||||||||||||    
T  53400308 aaaatctaacggagaggactaaaatggtaaacgacataagatttataggaccaaattgagacac 53400245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 37559117 - 37559059
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||||| |||||||||||||| |||||| |   ||| ||||||||||||||||||||||    
T  37559117 actaacggagatgaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagaca 37559059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 55953861 - 55953907
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||||| |||||| ||| |||||||| |||||||||||||||||    
T  55953861 gaccaaaatagtaaacggcataagatttacgggaccaaattgagaca 55953907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 15787078 - 15787013
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||||||| |||| |||| || || |||| ||||| |||||| | |||||||||||||||||||||    
T  15787078 gttaaaaattaacggagaggatcataatgataaacggcagaaaagttatgggaccaaattgagaca 15787013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 8e-36; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 211
Target Start/End: Original strand, 24494887 - 24495066
Alignment:
Q  35 tattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaag--aaaaaatcaaatggttaaaattagaaaatt 132  Q
    |||||||||| ||||||||||||||||||||||||||| | |||| ||||||||||  || |||||||  ||||||||||||||||||||||| |||| |    
T  24494887 tattaggtgtgagtggttcacagtaaagtacaatagacgccacatgattcaacggttatcttttaaaggaaaaaaatcaaatggttaaaattaaaaaaat 24494986  T
Q  133 taataagatctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaa 211  Q
    |||||||   || |||| ||||  |||||||||||||||| |||||  ||| ||||||||||||||| |||| |||||||    
T  24494987 taataaggcatatggtggaccacttttaaatatggttcactttagacatttgatgttaaaaactaacggagaggaccaaa 24495066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 4167734 - 4167511
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| ||||||||||  |||||| ||| |||| ||||| |||||| |||| || ||||   |||| |||||||||||||||||| |||| |||||  |||    
T  4167734 aaaaatattaggtgtcggtggtttacaataaaatacaacagaccctacatcatccaacaaacctcttttaaagaaaaaatcaaaaggttgaaatttaaaa 4167635  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttag-atttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    ||||||||||||||| |||| |||| ||||||| |||||||||||||| | ||| |||||||||| | ||||| ||||| ||||  ||||||  ||||||    
T  4167634 atttaataagatctatggtggaccacctttaaacatggttcaccttagaaatttgatgttaaaaattgacagaaatgactaaaacagtaaacgacagaag 4167535  T
Q  229 atttatgggaccaaattgagacac 252  Q
    | |||| ||| |||||||| ||||    
T  4167534 acttataggatcaaattgacacac 4167511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 14108915 - 14109104
Alignment:
Q  41 gtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataaga 140  Q
    ||||| || ||| ||| |||| || |||||| || |||| || ||||  ||||| |||||||||||||| ||| ||||||||||  ||| |||||||||     
T  14108915 gtgttggttgtttacaataaaatataatagatcctacatgatccaacaatcctcttttaaagaaaaaattaaaaggttaaaatttaaaattttaataagg 14109014  T
Q  141 tctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaaga 229  Q
    |||| |||| |||| ||||||| |||||||||||||||  ||| ||||||||||||||| |||| ||| |||| ||||||| ||| ||||    
T  14109015 tctatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaggactaaaacggtaaacggcaaaaga 14109104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 14418872 - 14419061
Alignment:
Q  41 gtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataaga 140  Q
    ||||| || ||| ||| |||| || |||||| || |||| || ||||  ||||| |||||||||||||| ||| ||||||||||  ||| |||||||||     
T  14418872 gtgttggttgtttacaataaaatataatagatcctacatgatccaacaatcctcttttaaagaaaaaattaaaaggttaaaatttaaaattttaataagg 14418971  T
Q  141 tctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaaga 229  Q
    |||| |||| |||| ||||||| |||||||||||||||  ||| ||||||||||||||| |||| ||| |||| ||||||| ||| ||||    
T  14418972 tctatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaggactaaaacggtaaacggcaaaaga 14419061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 46458646 - 46458769
Alignment:
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
    |||||||||| |||| |||| || | || ||||  ||||||||||||||  |||| | |||||||| ||| |||| |||||||||||||||| | |||||    
T  46458646 atttaataaggtctatggtggactacctataaagttggttcaccttagacatttaaggttaaaaacaaacggagaggaccaaaatggtaaacggaagaag 46458745  T
Q  229 atttatgggaccaaattgagacac 252  Q
    ||||||||||||||||||||||||    
T  46458746 atttatgggaccaaattgagacac 46458769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 35315077 - 35315179
Alignment:
Q  37 ttaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaat 136  Q
    |||||||||||| |||||||||||||||||| |||||| |||| |||||||  |  || |||||||||||||| ||||||||||||| | |||||||| |    
T  35315077 ttaggtgttagtagttcacagtaaagtacaaaagaccctacatgattcaacaattatcttttaaagaaaaaataaaatggttaaaataaaaaaatttagt 35315176  T
Q  137 aag 139  Q
    |||    
T  35315177 aag 35315179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 252
Target Start/End: Complemental strand, 38406240 - 38406078
Alignment:
Q  90 tcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt-atgtt 188  Q
    ||||| |||||| ||||||| ||| |||| |||||  ||||||||||||| |||| | || || | |||||||||||||||||||||||  ||| |||||    
T  38406240 tcctcttttaaacaaaaaattaaaaggttgaaatttaaaaatttaataaggtctatg-tggactacctttaaatatggttcaccttagacatttgatgtt 38406142  T
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| || | ||||||||  ||||||  |||||||||||||| ||||  |||||||||    
T  38406141 aaaaattaacggaaaggaccaaaacagtaaacgtcagaagatttatggaaccagtttgagacac 38406078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 252
Target Start/End: Original strand, 25154820 - 25154992
Alignment:
Q  84 caacggtcctcatttaaagaaaaaa---tcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatt 180  Q
    |||||||| |||||| || ||||||   ||||| |||||||| || || |||||||||| | || |||| ||||  | ||||  ||||||||||||||      
T  25154820 caacggtcttcattttaaaaaaaaacgatcaaacggttaaaaataaaagatttaataagttttatggtggaccacttataaagttggttcaccttagaca 25154919  T
Q  181 tttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| | |||||||| ||| ||||||||||||||| ||||||| |||||||||||| ||  ||||||||||||    
T  25154920 tttaaggttaaaaacaaacggagatgaccaaaatgataaacagaagaagatttatgagattaaattgagacac 25154992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 40930567 - 40930478
Alignment:
Q  164 atggttcaccttagattttt-atgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||||||||| ||| |||||||||||||| ||||| ||| |||| |||||||| || |||||||||||||||||||||| ||||    
T  40930567 atggtccaccttagatatttgatgttaaaaactaatagagaggactaaaacggtaaacatcaaaagatttatgggaccaaattgaaacac 40930478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 24873590 - 24873653
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| ||| || |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24873590 aaaaacaaacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattgagacac 24873653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 26406335 - 26406185
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||| |||||| ||||||||||| |  | || |||| ||||| |||| |||| ||  |||  ||||||||||||||  |||| | ||||||| |||| ||    
T  26406335 aaaatatcaaagggttaaaattaaatgaatttataatatctatggtggaccacctacaaagttggttcaccttagacatttaaggttaaaaaataacgga 26406236  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||||||| ||||| |||||||| ||||| || |||||||||||||    
T  26406235 gatgaccaaaatgttaaacggcagaagagttatgagatcaaattgagacac 26406185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 46457192 - 46457130
Alignment:
Q  190 aaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||||| |||||||||||||||||  | |||||||||||||||||||||||||||||    
T  46457192 aaaacaaacagacatgaccaaaatggtaaatggaagaagatttatgggaccaaattgagacac 46457130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 43930445 - 43930381
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagac 250  Q
    |||||||| ||||||||| ||||||||| ||||||  |||||||||||| |||||||||||||||    
T  43930445 gttaaaaattaacagagaggaccaaaatagtaaacgacagaagatttataggaccaaattgagac 43930381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 13446651 - 13446714
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||| |||||| ||  ||||| |||||||||||||||||||||||||||||||    
T  13446651 aaaaactaacggagaggaccaatataataaacggcagaagatttatgggaccaaattgagacac 13446714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 18801498 - 18801275
Alignment:
Q  30 aaaagtattaggtgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaa 129  Q
    |||| ||||||||||||  ||  |||| |||| |||||||||| | |||| || ||||  ||||| |||||| ||||||| ||| ||||| ||||| |      
T  18801498 aaaaatattaggtgttataggcacacaataaaatacaatagactctacatgatccaacaatcctcttttaaacaaaaaattaaagggttacaattaaatt 18801399  T
Q  130 atttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaactaacagagatgaccaaaatggtaaacagcagaag 228  Q
     |||| |||| || | |||| | || ||| |||||||||||||||||||  |||  ||||||||| ||||||| | || ||   ||||||||||  | |     
T  18801398 ttttactaaggtccatggtggatcaccttgaaatatggttcaccttagagatttgctgttaaaaattaacagaaaggatcattttggtaaacagaggtat 18801299  T
Q  229 atttatgggaccaaattgagacac 252  Q
    ||||||||||||||||||||||||    
T  18801298 atttatgggaccaaattgagacac 18801275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 4858337 - 4858399
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||||| ||||| ||  ||||| ||||||| |||||||||||||||||||||||||||||    
T  4858337 aaaaactaatagagaggattaaaatagtaaacaacagaagatttatgggaccaaattgagaca 4858399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 4857347 - 4857262
Alignment:
Q  167 gttcaccttagattttt-atgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||||||||  ||| ||||||||||||||| |||| ||| ||||  |||||| ||||||||||| ||||||||||| ||||||    
T  4857347 gttcaccttagacatttgatgttaaaaactaacggagaggactaaaacagtaaacggcagaagatttgtgggaccaaatcgagaca 4857262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 27899182 - 27899267
Alignment:
Q  165 tggttcaccttagatttttatg-ttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgaga 249  Q
    ||||||||||||||| |||| | |||||||||||| || | ||||||||| ||||||  || ||||||||||||| ||||||||||    
T  27899182 tggttcaccttagatatttaaggttaaaaactaacggataagaccaaaatagtaaacgacaaaagatttatgggatcaaattgaga 27899267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 252
Target Start/End: Original strand, 19848690 - 19848890
Alignment:
Q  53 cacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaac 152  Q
    ||||||||| |||||||||| | |||| || ||||  ||||| |||||| ||||||||||| ||||| ||||| |   |||| |||| || | |||| |     
T  19848690 cacagtaaaatacaatagactctacatgatccaacaatcctcttttaaacaaaaaatcaaagggttacaattaaattttttactaaggtccatggtggat 19848789  T
Q  153 catctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    || ||| |||||||||||||||||||  |||  ||||||||| ||||||| | || ||    ||||||| |  | | |||||||||||||||||||||||    
T  19848790 caccttgaaatatggttcaccttagagatttgctgttaaaaattaacagaaaggatcacctgggtaaacggaggtatatttatgggaccaaattgagaca 19848889  T
Q  252 c 252  Q
    |    
T  19848890 c 19848890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 19278460 - 19278413
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  19278460 gaccaaaatagtaaacggcagaagaattatgggaccaaattgagacac 19278413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 22746317 - 22746376
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||| || |||||| |||||| ||| |||||||||||||||||||||||||||    
T  22746317 actaacggagaggatcaaaatagtaaacggcacaagatttatgggaccaaattgagacac 22746376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 25153765 - 25153718
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||    
T  25153765 gaccaaaacggtaaacggaagaagatttatgggaccaaattgagacac 25153718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 35315210 - 35315273
Alignment:
Q  184 atgttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattga 247  Q
    |||||||||||||||||||| ||| ||||  ||||||  ||||||| |||||||||||||||||    
T  35315210 atgttaaaaactaacagagaggactaaaacagtaaacgacagaagacttatgggaccaaattga 35315273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 14206796 - 14206738
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattga 247  Q
    |||||||||| ||||||| |||||| ||||||  |||||||||||| ||||||||||||    
T  14206796 aaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattga 14206738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 14215486 - 14215428
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattga 247  Q
    |||||||||| ||||||| |||||| ||||||  |||||||||||| ||||||||||||    
T  14215486 aaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattga 14215428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 252
Target Start/End: Original strand, 33459441 - 33459599
Alignment:
Q  95 atttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaa 193  Q
    ||||||| |||| |||||| ||||||||||| ||| ||||||||  || | |||  |||| ||  |||  ||||||||||||||   ||| | |||||||    
T  33459441 atttaaaaaaaatatcaaacggttaaaattacaaattttaataaagtccatggtagaccacctacaaagttggttcaccttagacagttaaggttaaaaa 33459540  T
Q  194 ctaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||| | ||||| | | |||||| |  ||||| ||||||||||||||||||||||    
T  33459541 ctaacagaaaagaccacattagtaaacggaggaagacttatgggaccaaattgagacac 33459599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 35127921 - 35127871
Alignment:
Q  201 agatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||||||||| |||||| ||| |||||||||||||| |||||||||||    
T  35127921 agatgaccaaaatagtaaacggcataagatttatgggacaaaattgagaca 35127871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 36702959 - 36703005
Alignment:
Q  205 gaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    ||||||||| |||||| |||||| |||||||||||||||||||||||    
T  36702959 gaccaaaatagtaaacggcagaatatttatgggaccaaattgagaca 36703005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 131895 - 131940
Alignment:
Q  93 tcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataa 138  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||    
T  131895 tcatttaaagaaaagatcaaacggttaaaattaaaaaatttaataa 131940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 22061792 - 22061849
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagac 250  Q
    |||||| |||| ||| ||||| |||||| ||| |||||||||||||||||||||||||    
T  22061792 actaacggagaagactaaaatagtaaacggcataagatttatgggaccaaattgagac 22061849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 46674933 - 46674990
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||| ||||||||| |||||| ||| ||||||||||||||||||| |||||||    
T  46674933 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaatcgagacac 46674990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 36702886 - 36702838
Alignment:
Q  203 atgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||| |||||| |||||| |||||| |||||||||||||||||||||||    
T  36702886 atgatcaaaatagtaaacggcagaatatttatgggaccaaattgagaca 36702838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 47163276 - 47163220
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaatt 245  Q
    |||||||||| |||| ||||||||| |||||| | | ||||||||||||||||||||    
T  47163276 aaaaactaacggagaggaccaaaatagtaaacggaaaaagatttatgggaccaaatt 47163220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 22060582 - 22060523
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||||||||||||| |||||| ||| |||| || ||| |||||||||||||||    
T  22060582 actaacggagatgaccaaaatagtaaacggcataagacttgtggaaccaaattgagacac 22060523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 43006504 - 43006445
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||||||||||||| | |||| ||| |||| ||| ||||||||||||||||||    
T  43006504 actaacggagatgaccaaaatagcaaacggcataagacttaggggaccaaattgagacac 43006445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 43935288 - 43935245
Alignment:
Q  209 aaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||    
T  43935288 aaaatagtaaacggcagaagatttatgagaccaaattgagacac 43935245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 13286984 - 13287050
Alignment:
Q  186 gttaaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||  ||| ||||||||| |||||||||| ||||  || ||||||||||||| ||||    
T  13286984 gttaaaaactaacgaagaggaccaaaatagtaaacagcataagacataagggaccaaattgaaacac 13287050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 247
Target Start/End: Original strand, 35484212 - 35484361
Alignment:
Q  98 taaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttta-tgttaaaaacta 196  Q
    |||| |||| |||||| ||||||||||| ||||| || ||||||||| |||| |||| || |||   ||||||||||||||  ||||  |||||||||||    
T  35484212 taaacaaaagatcaaagggttaaaatta-aaaatctattaagatctatggtggaccacctataatgttggttcaccttagacatttagggttaaaaacta 35484310  T
Q  197 acagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattga 247  Q
    ||  ||  ||||||||| |  ||  |||||||| ||||||||| |||||||    
T  35484311 acgaagtggaccaaaataggtaatggcagaagagttatgggactaaattga 35484361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 45719721 - 45719675
Alignment:
Q  206 accaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||||| ||||||| ||||| ||||||||| ||||||    
T  45719721 accaaaatggtaaacaacagaagagttatgagaccaaatttagacac 45719675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 22744863 - 22744806
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||| ||||||||| |||||| ||| ||||||||| |||||||||||| ||||    
T  22744863 taacggagaagaccaaaatagtaaacggcataagatttataggaccaaattgaaacac 22744806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 40926518 - 40926575
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||| |||| |||||||| ||||||| | |||| |||||| |||||||||||||||||    
T  40926518 taacggagaggaccaaaacggtaaacggtagaaaatttataggaccaaattgagacac 40926575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 212
Target Start/End: Original strand, 207643 - 207814
Alignment:
Q  42 tgttagtggttcacagtaaagtacaatagacccgacataattcaacggtcctcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagat 141  Q
    ||||||||||||||||||||||||||||||| | || | |||||| |||| |  |||||||||||||||||||||||||||||| |||||||| ||||      
T  207643 tgttagtggttcacagtaaagtacaatagactcaacttgattcaatggtcttgttttaaagaaaaaatcaaatggttaaaattaaaaaatttagtaaggc 207742  T
Q  142 ctacggtgaaccatctttaaatatggttcaccttaga-tttttatgttaaaaactaacagagatgaccaaaa 212  Q
     || |||| |||| ||||||| ||||||||||| |||  ||| ||||||||||||||| |||| ||||||||    
T  207743 atatggtggaccacctttaaacatggttcacctaagacatttgatgttaaaaactaacggagaggaccaaaa 207814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 252
Target Start/End: Original strand, 56507 - 56756
Alignment:
Q  7 gagatgaagatgaagaaaa-tgataaaagtattaggtgttagtggttcacagtaaagtacaatagacc-cgacataattcaacggtcctcatttaaagaa 104  Q
    |||| |||||||||||||  ||| |||| ||||||||||| |||||| ||| |||| ||||||||| | | || | || ||||  || || |||||||||    
T  56507 gagaagaagatgaagaaaggtgagaaaaatattaggtgttggtggtttacaataaaatacaatagaacactacgtgatccaacaatcatcttttaaagaa 56606  T
Q  105 aaaa-tcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagattttt-atgttaaaaactaacagag 202  Q
    |||| ||||| ||||||||||  ||||||||||||| |||  |||| |||||||||||| || |||  |||||||| ||| |||||||||||||| ||||    
T  56607 aaaaatcaaaaggttaaaatttaaaaatttaataaggtctttggtggaccatctttaaacatagtttcccttagatatttgatgttaaaaactaatagag 56706  T
Q  203 atgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    | || | |||  |||||| ||||||||||||| |||||||||||||||||    
T  56707 aggatctaaacagtaaacggcagaagatttataggaccaaattgagacac 56756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 54714 - 54651
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| |||| ||||| | ||||||||||  ||||||||||||||||||||||||||||    
T  54714 aaaaactaacggagaggaccacattggtaaacagaggaagatttatgggaccaaattgagacac 54651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 251
Target Start/End: Complemental strand, 47290 - 47131
Alignment:
Q  93 tcatttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttat-gttaaa 191  Q
    |||||| || |||| |||||| ||||||||||| ||||||||||||  | || |||  |||| ||  |||  |  |||||||||||  ||||  ||||||    
T  47290 tcattttaaaaaaagatcaaacggttaaaattaaaaaatttaataaagtttatggtagaccacctacaaagttaattcaccttagacatttaaagttaaa 47191  T
Q  192 aactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    || |||| |||| ||||||||| |||||| | ||||||||||||||||||||||||||||    
T  47190 aattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagaca 47131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 48449 - 48512
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    ||||| |||| |||||||||||||  |||||| |||||| |||||||||| |||||||||||||    
T  48449 aaaaattaacggagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacac 48512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 247
Target Start/End: Original strand, 77085 - 77232
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttaga---tttttatgttaaaaactaaca 199  Q
    |||| |||||||||||||||||| |  |  | ||||| || | |||| |||| |||||||||||||||||||||||    ||| |||| ||| | ||||     
T  77085 aaaatatcaaatggttaaaattaaatgaacttataaggtcaatggtggaccacctttaaatatggttcaccttagacacatttgatgtcaaacattaacg 77184  T
Q  200 gagatgaccaaaatggtaaacagcagaagatttatgggaccaaattga 247  Q
    |||| ||||||||  |||||| | |||| |||||||||||||||||||    
T  77185 gagaagaccaaaacagtaaacggtagaatatttatgggaccaaattga 77232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 238
Target Start/End: Complemental strand, 16155 - 16019
Alignment:
Q  103 aaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaaccatctttaaatatggttcaccttagatttttatg-ttaaaaactaacaga 201  Q
    |||| |||||| |||||||| || ||  ||||||||| |||| |||| ||||||| ||||  ||||||| ||||||  |||| | |||||||||||| ||    
T  16155 aaaatatcaaacggttaaaaataaaaggtttaataaggtctatggtggaccatctataaagttggttcatcttagacatttaaggttaaaaactaacgga 16056  T
Q  202 gatgaccaaaatggtaaacagcagaagatttatggga 238  Q
    || ||| ||||| |||||| ||| ||| |||||||||    
T  16055 gaggactaaaatagtaaacggcataaggtttatggga 16019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 2258 - 2321
Alignment:
Q  189 aaaaactaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||| || | ||||||||| |||||||| |||||| ||||||||||||||||| ||||    
T  2258 aaaaactaacggaaaggaccaaaatagtaaacagtagaagagttatgggaccaaattgaaacac 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 96269 - 96220
Alignment:
Q  203 atgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||||||||||||||| | ||||||||||| ||| |||||||||||||    
T  96269 atgaccaaaatggtaaacggaagaagatttatcggatcaaattgagacac 96220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 145868 - 145924
Alignment:
Q  195 taacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagaca 251  Q
    |||| |||||||||||||| |||||| ||| ||||||||| |||||||||| |||||    
T  145868 taacggagatgaccaaaatagtaaacggcataagatttattggaccaaattaagaca 145924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 512 - 571
Alignment:
Q  193 actaacagagatgaccaaaatggtaaacagcagaagatttatgggaccaaattgagacac 252  Q
    |||||| |||| ||||||||| |||||| ||| ||||||||||  |||||||||||||||    
T  512 actaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacac 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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