View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5512-Insertion-5 (Length: 345)
Name: NF5512-Insertion-5
Description: NF5512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5512-Insertion-5 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 8 - 345
Target Start/End: Original strand, 8553332 - 8553671
Alignment:
| Q |
8 |
atatccaccaacataatcaagattcatcaaagaatagatagttnnnnnnntagggcaatatctttggcataacaataattactactactagtatatgcta |
107 |
Q |
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| T |
8553332 |
atatccaccaacataatcaagattcatcaaagaatagctagttaaaaaaatagggcaatatctttggcataacaataattactactactagtatatgcta |
8553431 |
T |
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| Q |
108 |
gttgccaagatattaaactcaagatatgtcatgcattaagaaactatgataaattaaacagctggcctcatat--ggtttaataatttggaagtaacaaa |
205 |
Q |
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| T |
8553432 |
gttgccaagatattaaactcaagatatgtcatgcattaagaaactatgataaattaaacagctggcctcatatatggtttaataatttggaagtaacaaa |
8553531 |
T |
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| Q |
206 |
gaaagatgttgttgttgggagttaacaaaggtagaatccaacaaaaactccaatccacctaagagttgaggtaaggttgccgggttcctgttcccatggc |
305 |
Q |
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| T |
8553532 |
gaaagatgttgttgttgggagttaacaaaggtagaatccaacaaaaactccaatccacctaagagttgaggtaaggttgccgggttcctgttcccatggc |
8553631 |
T |
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| Q |
306 |
tttgtctggattacagcagtgttccctcttttcatgttca |
345 |
Q |
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| T |
8553632 |
tttgtctggattacagcagtgttccctcttttcatgttca |
8553671 |
T |
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