View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5514_high_7 (Length: 227)
Name: NF5514_high_7
Description: NF5514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5514_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 45479915 - 45480109
Alignment:
| Q |
17 |
taggacaaatgttgaatgtatgcacgacaaacgcattggctagggtaatgataggacggcgagtatttaatgaggggaatggtgggtatgaatgtgatcc |
116 |
Q |
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| T |
45479915 |
taggacaaatgttgaatgtatgcacgacaaacgcattggctagggtaatgataggacggcgagtatttaatgaggggaatggtgggtgtgaatgtgatcc |
45480014 |
T |
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| Q |
117 |
tagggctgatgagtttaagtctatggtggttgaacttatggtattggctggtgttttcaatattggtgattttcttcctgctttcgagtggttgg |
211 |
Q |
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| T |
45480015 |
tagggctgatgagtttaagtctatggttgttgaacttatggtattggctggtgttttcaatattggtgattttcttcctgctttcgagtggttgg |
45480109 |
T |
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